These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_919#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 622 fasta sequence [TTTTTTTTCAGAATAGATACTATCCATATCTTTCTTTAATACTATTAGTTTCGAAATAGGACGAAGAATACGCGAGTATACGGATATTGGATCGAGAATTGTTCCATGATGATTATCGTTACGTTATTCGAAAGTTTACGCGAAAGTTTGTAAGCTCGATATTCAAATAAATCGCGACGAGAAAGATAAAAAATGGCGTAAAATTTCGAGGGATCAACGAAAGGATTCGCATGCGATTCGTACTCGAAGCGGACTCGACGAGGAAAATGGAAAAGCAAAGACCCGAGGCCCGATTCCCTGCTATATTGTTTCTATCGTTCGATTTACTTTCCTCTTTTGTGTGTGTTTTGCGTGTGTGTGTTGTTTTTTTTTCGTTCTCTCTTCAAATGAAATTGTGTGTATTTTTCTTTGTGTGCTATATATATATGTGTGTATATATATGTATATATATATATATAGTACAAAAGGAAAGATAGGTGTAAATATAGACACGCTTTTGTAGATTAATTTCCGATTATTTTGCGATTATTTGATTGATATTATATCGATTATATATCAAGTTTATAATAATATCTTTGAAACAGTGGACATTGTTTATAATATATTGCACATAATTTTTCTT] [-] EMBL BI506198 [TTTTTTTTCAGAATAGATACTATCCATATCTTTCTTTAATACTATTAGTTTCGAAATAGGACGAAGAATACGCGAGTATACGGATATTGGATCGAGAATTGTTCCATGATGATTATCGTTATATTATTCGAAAGTTTACGCGAA TTTGTAAGCTCGATATTCAAATAAATCGCGACGAGAAAGATAAAAAATGGCGTAAAATTTCGAGGGATCAACGAAAGGATTCGCATGCGATTCGTACTCGAAGCGGACTCGACGAGGAAAATGGAAAAGCAAAGACCCGAGGCCCGATTCCCTGCTATATTGTTTCTATCGTTCGATTTACTTTCCTCTTT ] [+] EMBL BI503588 [ CTTTCTTTAATACTATTAGTTTCGAAATAGGACGAAGAATACGCGAGTATACGGATATTGGATCGAGAATTGTTCCATGATGATTATCGTTACGTTATTCGAAAGTTTACGTGAAAGTTTGTAAGCTCGATATTCAAATAAATCGCAACGAGAAAGATAAAAAATGGCGTAAAATTTCGAGGGATCAACGAAAGGATTCGCATGCGATTCGTACTCGAAGCGGACTCGACGAGGAAAATGGAAAAGCAAAGACCCGAGGCCCGATTCCCTGCTATATTGTTTCTATCGTTCGATTTACTTTCCTCTTTTGTGTGTGTTTTGCGTGTGTGTGTTGTTTTTTTTTCGTTCTCTCTTCAAATGAAATTGTGTGTATTTTTCTTTGTGTGCTATATATATATGTGTGTATATATATGTATATATATATATATAGTACAAAAGGAAAGATAGGTGTAAATATAGACACGCTTTTGTAGATTAATTTCCGATTATTTTGCGATTATTTGATTGATATTATATCGATTATATATCAAGTTTATAATAATATCTTTGAAACAGTGGACATTGTTTATAATATATTGCACATAATTTTTCTT] consensusID : consensus_919#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 450 fasta sequence [TTTTTTTTTAGAATAGATACTATCCATATCTTTCTTTAATACTATTAGTTTCGAAATAGGACGAAGAATACGCGAGTATACGGATATTGGATCGAGAATTGTTCCATGATGATTATCGTTACGTTATTCGAAAGTTTACGTGAAAGTTTGTAAGCTCGATATTCAAATAAATCGCAACGAGAAAGATAAAAAATGGCGTAAAATTTCGAGGGATCAACGAAAGGATTCGCATGCGATTCGTACTCGAAGCGGACTCGACGAGGAAAATGGAAAAGCAAAGACCCGAGGCCCGATTCCCTGCTATATTGTTTCTATCGTTCGATTTACTTTCCTCTTTTGTGTGTGTTTTGCGTGTGTGTGTTGTTTTTTTTTCGTTCTCTCTCACTCTCTCTCTTTTTTTTGTCGTCTCTCTTTTTTATTCTTTTTTCTTTTTTTTTTCTTTTTCTTCTT] [-] EMBL BI503325 [TTTTTTTTTAGAATAGATACTATCCATATCTTTCTTTAATACTATTAGTTTCGAAATAGGACGAAGAATACGCGAGTATACGGATATTGGATCGAGAATTGTTCCATGATGATTATCGTTACGTTATTCGAAAGTTTACGTGAAAGTTTGTAAGCTCGATATTCAAATAAATCGCAACGAGAAAGATAAAAAATGGCGTAAAATTTCGAGGGATCAACGAAAGGATTCGCATGCGATTCGTACTCGAAGCGGACTCGACGAGGAAAATGGAAAAGCAAAGACCCGAGGCCCGATTCCCTGCTATATTGTTTCTATCGTTCGATTTACTTTCCTCTTTTGTGTGTGTTTTGCGTGTGTGTGTTGTTTTTTTTTCGTTCTCTCTCACTCTCTCTCTTTTTTTTGTCGTCTCTCTTTTTTATTCTTTTTTCTTTTTTTTTTCTTTTTCTTCTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_919#0 TTTTTTTTCAGAATAGATACTATCCATATCTTTCTTTAATACTATTAGTTTCGAAATAGG 60 consensus_919#1 TTTTTTTTTAGAATAGATACTATCCATATCTTTCTTTAATACTATTAGTTTCGAAATAGG 60 ******** *************************************************** consensus_919#0 ACGAAGAATACGCGAGTATACGGATATTGGATCGAGAATTGTTCCATGATGATTATCGTT 120 consensus_919#1 ACGAAGAATACGCGAGTATACGGATATTGGATCGAGAATTGTTCCATGATGATTATCGTT 120 ************************************************************ consensus_919#0 ACGTTATTCGAAAGTTTACGCGAAAGTTTGTAAGCTCGATATTCAAATAAATCGCGACGA 180 consensus_919#1 ACGTTATTCGAAAGTTTACGTGAAAGTTTGTAAGCTCGATATTCAAATAAATCGCAACGA 180 ******************** ********************************** **** consensus_919#0 GAAAGATAAAAAATGGCGTAAAATTTCGAGGGATCAACGAAAGGATTCGCATGCGATTCG 240 consensus_919#1 GAAAGATAAAAAATGGCGTAAAATTTCGAGGGATCAACGAAAGGATTCGCATGCGATTCG 240 ************************************************************ consensus_919#0 TACTCGAAGCGGACTCGACGAGGAAAATGGAAAAGCAAAGACCCGAGGCCCGATTCCCTG 300 consensus_919#1 TACTCGAAGCGGACTCGACGAGGAAAATGGAAAAGCAAAGACCCGAGGCCCGATTCCCTG 300 ************************************************************ consensus_919#0 CTATATTGTTTCTATCGTTCGATTTACTTTCCTCTTTTGTGTGTGTTTTGCGTGTGTGTG 360 consensus_919#1 CTATATTGTTTCTATCGTTCGATTTACTTTCCTCTTTTGTGTGTGTTTTGCGTGTGTGTG 360 ************************************************************ consensus_919#0 TTGTTTTTTTTTCGTTCTCTCTTCAAATGAAATTGTGTGTATTTTTCTTTGTGTGCTATA 420 consensus_919#1 TTGTTTTTTTTTCGTTCTCTCTC------ACTCTCTCTCTTTTTTTTGTCGTCTCTCTTT 414 ********************** * * * * * ***** * ** * * consensus_919#0 TATATATGTGTGTATATATATGTATATATATATATATAGTACAAAAGGAAAGATAGGTGT 480 consensus_919#1 TTTATTCTTTTTTCTTTTTTTTTTCTTTTTCTTCTT------------------------ 450 * *** * * * * * * * * * * * * consensus_919#0 AAATATAGACACGCTTTTGTAGATTAATTTCCGATTATTTTGCGATTATTTGATTGATAT 540 consensus_919#1 ------------------------------------------------------------ consensus_919#0 TATATCGATTATATATCAAGTTTATAATAATATCTTTGAAACAGTGGACATTGTTTATAA 600 consensus_919#1 ------------------------------------------------------------ consensus_919#0 TATATTGCACATAATTTTTCTT 622 consensus_919#1 ---------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |