These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_975#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 857 fasta sequence [GCAAATGTCACAAGACCACAGCGGTATAATCGATCGTTAACAAATCTTTGGTTATTCCATCGTGTTATGCTCGTCCAAATGTCTCAAATTTCGAGGGAAATTCGGCATTTCCCTTGAAAATTGAAATATTTGTTAGCGAGAATAACGTTATCGATTTGTCGTCTAGCGAGAGAAAAATCATGTGAGAACACGCATGCGTCATTGCACGTGCTTACGACGTAGAGACGAAAAAAAGCGTTACACATTAATTACAACCATGATTTCTTTAATCATGGAAGCCATCAAGAAACACGAATGTATCGCGATTTTCTTTTTCGTAATTCTTTTTTTTTTTCGTAATTTTTTCATAATTTCTTCGTAATTTTCTCATATTCTTCTCCCAATTTCTTTATTCTTAATTCTTTCGTAAATCGAAAGGTATGATGAGAGGTAGTGGAAAGAATATACGAATGCGAAGAGAAAAATGAAAATAATGGAGAGAGAAAGAGAAAAAGAGAAAAAGATGAAATAATAAAGGATTGAATCGAACGATTGAACATTTTCATCTTCACGAGTAATAATATCATACCTTTCATAGCCTAATTCTTGCTACTAATCGACGTTATCGATTGACATCTTTCTCTCAAAAACTGCATCTTCGAATTTTTAACGATACATTTTTGTTACTTGTTTCCGTTCGTTCATTTATAGTATATGTATGTACAATAGCGTATGGCGTAATCAACCACAGTCTTGGTAATACAATAGTTTCATGAGAAAACTAAAAAAAATGCATTCTCGACCGATATCTATTTCTCGCGCGATATTGTTTTATTTCAGGATGTGTTTCGTTACAATTTTTGCTCCCTTGAACCACA] [-] EMBL BI508896 [GCAAATGTCACAAGACCACAGCGGTATAATCGATCGTTAACAAATCTTTGGTTATTCCATCGTGTTATGCTCGTCCAAATGTCTCAAATTTCGAGGGAAATTCGGCATTTCCCTTGAAAATTGAAATATTTGTTAGCGAGAATAACGTTATCGATTTGTCGTCTAGCGAGAGAAAAATCATGTGAGAACACGCATGCGTCATTGCACGTGCTTACGACGTAGAGACGAAAAAAAGCGTTACACATTAATTACAACCATGATTTCTTTAATCATGGAAGCCATCAAGAAACACGAATGTATCGCGATTTTCTTTTTCGTAATTCTTTTTTTTTTTCGTAATTTTTTCATAATTTCTTCGTAATTTTCTCATATTCTTCTCCCAATTTCTTTATTCTTAATTCTTTCGTAAATCGAAAGGTATGATGAGAGGTAGTGGAAAGAATATACGAATGCGAAGAGAAAAATGAAAATAATGGAGAGAGAAAGAGAAAAAGAGAAAAAGATGAAATAATAAAGGATTGAATCGAACGATTGAACATTTTCATCTTCACGAGTAATAATATCATACCTTTCATAGCCTAATTCTTGCTACTAATCGACGTTATCGATTGACATCTTTCTCTCA ] [+] EMBL BI505705 [ AAACACGAATGTATCGCGATTTTCTTTTTCGTAATTCTTTTTTTTTTTCGTAATTTTTTCATAATTTCTTCGTAATTTTCTCATATTCTTCTCCCAATTTCTTTATTCTTAATTCTTTCGTAAATCGAAAGGTATGATGAGAGGTAGTGGAAAGAATATACGAATGCGAAGAGAAAAATGAAAATAATGGAGAGAGAAAGAGAAAAAGAGAAAAAGATGAAATAATAAAGGATTGAATCGAACGATTGAACATTTTCATCTTCACGAGTAATAATATCATTCCTTTCATAGCCTAATTCTTGCTACTAATCGACGTTATCGATTGACATCTTTCTCTCAAAAACTGCATCTTCGAATTTTTAACGATACATTTTTGTTACTTGTTTCCGTTCGTTCATTTATAGTATATGTATGTACAATAGCGTATGGCGTAATCAACCACAGTCTTGGTAATACAATAGTTTCATGAGAAAACTAAAAAAAATGCATTCTCGACCGATATCTATTTCTCGCGCGATATTGTTTTATTTCAGGATGTGTTTCGTTACAATTTTTGCTCCCTTGAACCACA] consensusID : consensus_975#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 205 fasta sequence [TCCTTTACTCTACGCACTCTCTTCTCGCATTTGAATATCCCTTCGAAAAAGCATTTTTATCTACGCCGCATCGTTAACATATTGACGATATGAAACGGTGCACGCTCGATCGATATCAGGTTGGCGTCACTGTCGCTTCGAAAAAAACGACAATGGGATGATGGCGTGTGGTTCAAGGGAGCAAAAATTGTAACGAAACACATCC] [+] EMBL BI508749 [TCCTTTACTCTACGCACTCTCTTCTCGCATTTGAATATCCCTTCGAAAAAGCATTTTTATCTACGCCGCATCGTTAACATATTGACGATATGAAACGGTGCACGCTCGATCGATATCAGGTTGGCGTCACTGTCGCTTCGAAAAAAACGACAATGGGATGATGGCGTGTGGTTCAAGGGAGCAAAAATTGTAACGAAACACATCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_975#0 GCAAATGTCACAAGACCACAGCGGTATAATCGATCGTTAACAAATCTTTGGTTATTCCAT 60 consensus_975#1 ------------------------------------------------------------ consensus_975#0 CGTGTTATGCTCGTCCAAATGTCTCAAATTTCGAGGGAAATTCGGCATTTCCCTTGAAAA 120 consensus_975#1 ------------------------------------------------------------ consensus_975#0 TTGAAATATTTGTTAGCGAGAATAACGTTATCGATTTGTCGTCTAGCGAGAGAAAAATCA 180 consensus_975#1 ------------------------------------------------------------ consensus_975#0 TGTGAGAACACGCATGCGTCATTGCACGTGCTTACGACGTAGAGACGAAAAAAAGCGTTA 240 consensus_975#1 ------------------------------------------------------------ consensus_975#0 CACATTAATTACAACCATGATTTCTTTAATCATGGAAGCCATCAAGAAACACGAATGTAT 300 consensus_975#1 ------------------------------------------------------------ consensus_975#0 CGCGATTTTCTTTTTCGTAATTCTTTTTTTTTTTCGTAATTTTTTCATAATTTCTTCGTA 360 consensus_975#1 ------------------------------------------------------------ consensus_975#0 ATTTTCTCATATTCTTCTCCCAATTTCTTTATTCTTAATTCTTTCGTAAATCGAAAGGTA 420 consensus_975#1 ------------------------------------------------------------ consensus_975#0 TGATGAGAGGTAGTGGAAAGAATATACGAATGCGAAGAGAAAAATGAAAATAATGGAGAG 480 consensus_975#1 ------------------------------------------------------------ consensus_975#0 AGAAAGAGAAAAAGAGAAAAAGATGAAATAATAAAGGATTGAATCGAACGATTGAACATT 540 consensus_975#1 ------------------------------------------------------------ consensus_975#0 TTCATCTTCACGAGTAATAATATCATACCTTTCATAGCCTAATTCTTGCTACTAATCGAC 600 consensus_975#1 --------------------TCCTTTACTCTACGCACTCTC-TTCTCGCATTTGAATATC 39 * *** * * * ** **** ** * * * consensus_975#0 GTTATCGATTGACATCTTTCTCTCAAAAACTGCATCTTCGAATTTTTAACGATACATTTT 660 consensus_975#1 CCTTCGAAAAAGCATTTTTATCT---ACGCCGCATCGTTAACATATTGACGATATGA--- 93 * * *** *** *** * * ***** * * * ** ****** consensus_975#0 TGTTACTTGTTTCCGTTCGTTCATTTATAGTATATGTATGTACAATAGCGTATGGCGTAA 720 consensus_975#1 ----AACGGTGCACGCTCGATCG---ATATCAGGTTGGCGT-CACTGTCGCTT--CGAAA 143 * ** ** *** ** *** * * ** ** * ** * ** ** consensus_975#0 TCAACCACAGTCTTGGTAATACAATAGTTTCATGAGAAAACTAAAAAAAATGCATTCTCG 780 consensus_975#1 AAAACGACAATGG-GATGATGGCGT-GTGGTTCAAGGGAGC---AAAAATTGTAA---CG 195 *** *** * * * ** * ** ** * * ***** ** * ** consensus_975#0 ACCGATATCTATTTCTCGCGCGATATTGTTTTATTTCAGGATGTGTTTCGTTACAATTTT 840 consensus_975#1 AAACACATCC-------------------------------------------------- 205 * * *** consensus_975#0 TGCTCCCTTGAACCACA 857 consensus_975#1 ----------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |