cluster # 10029

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Oryza sativa
cluster # 10029 cluster # 10029 Sequences # 7 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10029#0 length = 1213 sequences # 4
consensus_10029#1 length = 720 sequences # 1

consensus_10029#2 length = 502 sequences # 1
consensus_10029#3 length = 356 sequences # 1

consensusID : consensus_10029#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1213
fasta sequence

                              [TTCTCCACTCCCAAATCGTATTTCTTGAGCTTCCCAGCAACACAGCACAAATATGGCCAGGAGATGGGGTCTCTTCTTCTTTCTCCCCCTCCTCCTCCTCCTCCTCCTCTCCTGCTCCTGCATCATCTCCCACGCGCTTCCCTGCTGCTCAGGCAAACAAACTGCCCACGATGACCTGAATCCAGAACAGGCAACTAATCCAACGATGCCAATCACAGTCCCATCTACAAACCCAGCACCAATTATCATCACTGTTCCTTCCACAAACCCTACCATCACAATTCCTTCCTTGAATCCTCTCCCTACACCCATTACTGCCCCCTCAATGGTGAATCCTTCCACCTCACCTGCACCTGCGGCATACCCGCTACCGACGCCTTCAACCTCTCCTCCTTCTGCATCATTAACCAACCCAACATCAAACCCAATGACGCCTGCTATCAGCATGCCACCTCCTGCTCTCACCACAACTCCACCCACTGCCCCAGGTCTTTCTGGGCAGCAACTATGGTGTGTGGCCAAGGCTGACTCAGCAGATATTGCACTTCAGAATGCACTGGACTACGCATGCGGCATTGGAGGAGCAGATTGCTTAGCAATACAACCATCAGGCACTTGTTATTATCCAAATACCTTAGGTGCGCATGCATCCTATGCTTTTAACAGCTATTACCAGAGGAGCCCTGCAACCTCCAGCTGCGATTTTGGGGGGACGGCAATTCTTGTCAATGTCAATCCCAGCTCAGGAAGCTGTGTTTTGGCATCGTCAATGTCGTTACCATCAAGCTCCGTGTCTGGGTACAATCCTGCATTGACAACTCCTACGGCATCATCCACTATTACTCCTACTACGTTATCTGGTTCAGGTCCATCAGTGCTGAACCCGGATGGCTCAGGCTCCGCCAGTAGTTCTGAGTTTGGTTCAGACATTCCAGCCACGAGCAATTCTTGGCGTTCAATCTCCCCCAATGGCTGGTCCTTGGCAGCTTCGTTTTCAATGCTTGCATGGGCATACATGATGAAAGGAACAATTTTGGAAACAGAGTGATTAAAACGATGTAAAGAGCTAGGGAATTCACTCGGCCAAGTTGTATGGCGCGCAGGTTGGGCCGGAACTAGGAAATACTTCCTCCATTTCATATTATAAGACTTTCTAACATTGTCCACATTCTAATGAATTTTGATATATATAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF313744             [TTCTCCACTCCCAAATCGTATTTCTTGAGCTTCCCAGCAACACAGCACAAATATGGCCAGGAGATGGGGTCTCTTCTTCTTTCTCCCCCTCCTCCTCCTCCTCCTCCTCTCCTGCTCCTGCATCATCTCCCACGCGCTTCCCTGCTGCTCAGGCAAACAAACTGCCCACGATGACCTGAATCCAGAACAGGCAACTAATCCAACGATGCCAATCACAGTCCCATCTACAAACCCAGCACCAATTATCATCACTGTTCCTTCCACAAACCCTACCATCACAATTCCTTCCTTGAATCCTCTCCCTACACCCATTACTGCCCCCTCAATGGTGAATCCTTCCACCTCACCTGCACCTGCGGCATACCCGCTACCGACGCCTTCAACCTCTCCTCCTTCTGCATCATTAACCAACCCAACATCAAACCCAATGACGCCTGCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK061392             [ TCTCCACTCCCAAATCGTATTTCTTGAACTTCCCAGCAACACAGCACAAATATGGCCAGGAGATGGGGTCTCTTCTTCTTTCTCCCCCTCCTCCTCCTCCTCCTCCTCTCCTGCTCCTGCATCATCTCCCACGCGCTTCCCTGCTGCTCAGGCAAACAAACTGCCCACGATGACCTGAATCCAGAACAGGCAACTAATCCAACGATGCCAATCACAGTCCCATCTACAAACCCAGCACCAATTATCATCACTGTTCCTTCCACAAACCCTACCATCACAATTCCTTCCTTGAATCCTCTCCCTACACCCATTACTGCCCCCTCAATGGTGAATCCTTCCACCTCACCTGCACCTGCGGCATACCCGCTACCGACGCCTTCAACCTCTCCTCCTTCTGCATCATTAACCAACCCAACATCAAACCCAATGACGCCTGCTATCAGCATGCCACCTCCTGCTCTCACCACAACTCCACCCACTGCCCCAGGTCTTTCTGGGCAGCAACTATGGTGTGTGGCCAAGGCTGACTCAGCAGATATTGCACTTCAGAATGCACTGGACTACGCATGCGGCATTGGAGGAGCAGATTGCTTAGCAATACAACCATCAGGCACTTGTTATTATCCAAATACCTTAGGTGCGCATGCATCCTATGCTTTTAACAGCTATTACCAGAGGAGCCCTGCAACCTCCAGCTGCGATTTTGGGGGGACGGCAATTCTTGTCAATGTCAATCCCAGCTCAGGAAGCTGTGTTTTGGCATCGTCAATGTCGTTACCATCAAGCTCCGTGTCTGGGTACAATCCTGCATTGACAACTCCTACGGCATCATCCACTATTACTCCTACTACGTTATCTGGTTCAGGTCCATCAGTGCTGAACCCGGATGGCTCAGGCTCCGCCAGTAGTTCTGAGTTTGGTTCAGACATTCCAGCCACGAGCAATTCTTGGCGTTCAATCTCCCCCAATGGCTGGTCCTTGGCAGCTTCGTTTTCAATGCTTGCATGGGCATACATGATGAAAGGAACAATTTTGGAAACAGAGTGATTAAAACGATGTAAAGAGCTAGGGAATTCACTCGGCCAAGTTGTATGGCGCGCAGGTTGGGCCGGAACTAGGAAATACTTCCTCCATTTCATATTATAAGACTTTCTAACATTGTCCACATTCTAATGAATTTTGATATATAT                      ]
[+] EMBL CA765935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATTGCACTTCAGAATGCACTGGACTACGCATGCGGCATTGGAGGAGCAGATTGCTTAGCAATACAACCATCAGGCACTTGTTATTATCCAAATACCTTAGGTGCGCATGCATCCTATGCTTTTAACAGCTATTACCAGAGGAGCCCTGCAACCTCCAGCTGCGATTTTGGGGGGACGGCAATTCTTGTCAATGTCAATCCCAGCTCAGGAAGCTGTGTTTTGGCATCGTCAATGTCATTACCATTAAGCTCCGTGTCTGGGTACAATCCTGCATTGACAACTCCTACGGCATCATCCACTATTACTCCTACTACGCTATCTGGTTCAGGTCCATCAGTGCTGAACCCGGATGGCTCAGGCTCCGCCAGTAGTTCTGAGTTTGGTTCAGACATTCCAGCCACGAGCAATTCTTGGCGTTCAATCTCCCCCAATGGCTGGTCCTTGGCAGCTTCGTTTTCAATGCTTGCATGGGCATACATGATGAAAGGAACAATTTTGGAAACAGAGTGATTAAAACGATGTAAAGAGCTAGGGAATTCACTCGGCCAAGTTGTATGGCGCGCAGGTAGGGCCGGAACTAAGAAATACTTCCTCCATTTCATATTATAAGACTTTCTAGCA                                                      ]
[+] EMBL AU075638             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCCAGCCACGAGCAATTCTTGGCGTTNAATCTCCCCCAATGGCTGGTCCTTGGCAGCTTCGTTTTCAATGCTTGCATGGGCATACATGATGAAAGGAACAATTTTGGAAACAGAGTGATTAAAACGATGTAAAGAGCTAGGGAATTCACTCGGCCAAGTTGTATGGCGCGCAGGTTGGGCCGGAACTAGGAAATACTTCCTCCATTTCATATTATAAGACTTTCTAACATTGTCCACATTCTAATGAATTTTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10029#0
TTCTCCACTCCCAAATCGTATTTCTTGAGCTTCCCAGCAACACAGCACAAATATGGCCAG
GAGATGGGGTCTCTTCTTCTTTCTCCCCCTCCTCCTCCTCCTCCTCCTCTCCTGCTCCTG
CATCATCTCCCACGCGCTTCCCTGCTGCTCAGGCAAACAAACTGCCCACGATGACCTGAA
TCCAGAACAGGCAACTAATCCAACGATGCCAATCACAGTCCCATCTACAAACCCAGCACC
AATTATCATCACTGTTCCTTCCACAAACCCTACCATCACAATTCCTTCCTTGAATCCTCT
CCCTACACCCATTACTGCCCCCTCAATGGTGAATCCTTCCACCTCACCTGCACCTGCGGC
ATACCCGCTACCGACGCCTTCAACCTCTCCTCCTTCTGCATCATTAACCAACCCAACATC
AAACCCAATGACGCCTGCTATCAGCATGCCACCTCCTGCTCTCACCACAACTCCACCCAC
TGCCCCAGGTCTTTCTGGGCAGCAACTATGGTGTGTGGCCAAGGCTGACTCAGCAGATAT
TGCACTTCAGAATGCACTGGACTACGCATGCGGCATTGGAGGAGCAGATTGCTTAGCAAT
ACAACCATCAGGCACTTGTTATTATCCAAATACCTTAGGTGCGCATGCATCCTATGCTTT
TAACAGCTATTACCAGAGGAGCCCTGCAACCTCCAGCTGCGATTTTGGGGGGACGGCAAT
TCTTGTCAATGTCAATCCCAGCTCAGGAAGCTGTGTTTTGGCATCGTCAATGTCGTTACC
ATCAAGCTCCGTGTCTGGGTACAATCCTGCATTGACAACTCCTACGGCATCATCCACTAT
TACTCCTACTACGTTATCTGGTTCAGGTCCATCAGTGCTGAACCCGGATGGCTCAGGCTC
CGCCAGTAGTTCTGAGTTTGGTTCAGACATTCCAGCCACGAGCAATTCTTGGCGTTCAAT
CTCCCCCAATGGCTGGTCCTTGGCAGCTTCGTTTTCAATGCTTGCATGGGCATACATGAT
GAAAGGAACAATTTTGGAAACAGAGTGATTAAAACGATGTAAAGAGCTAGGGAATTCACT
CGGCCAAGTTGTATGGCGCGCAGGTTGGGCCGGAACTAGGAAATACTTCCTCCATTTCAT
ATTATAAGACTTTCTAACATTGTCCACATTCTAATGAATTTTGATATATATAAAAAAAAA
AAAAAAAAAAAAA

consensusID : consensus_10029#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 720
fasta sequence

                              [TCCCACCCTTATTTCTTGAGCTTCCCAGCAACACAGCACAAATATGGCCAGGAGATGGGGTCTCTTCTTCTTTCTCCCCCTCCTCCTCCTCCTCCTCCTCTCCTGCTCCTGCATCATCTCCCACGCGCTTCCCTGCTGCTCAGGTCTGTGTGCTTGTTCCTCTGCTTCCATCTGCACCTTCAGACTTCAGTTCAGTGTGTATGAACTATCAGTGATGTACAGTTGCTGCTGGCGTCCACAAGGCCAGATCTTCATTTCTGTTCCCATGTTTTTCCCTTTTCCATTTGGCTAGCATATGACTAGGGTTTTTCATCATTCCTTTAATCCTACACCAGTTTTAAATGTATTTCGACTTGTACATTCCTGATTGGTTGCAAGAGCTTAGCGTGACGAGGGATTGGATTTGACCAAATTAACAATTTGGTCTTGTTTGAAAGAGAAATTTGATAATATACCATCCAATGAAATGGGGGAACCACCACATAACACTATTTCATCTCTTTTCTTACTATTAGTACAATAGTACAAGAGCATGGAAAGGAAATCTAATTTATCTATGTTCAATCCCACATCCCACCTAATGGATCATTAGTCCTTTTTAATTGCCTGAATCACGACCGTTTCCTACTCATGGGTATTACAAATTATGTCCTGATTTTTTTAATAAAAAACGACTACTCTTTGATTAAGTACTACTGAACTAGTACATCTTAAAAGGCT]

[+] EMBL CB645433             [TCCCACCCTTATTTCTTGAGCTTCCCAGCAACACAGCACAAATATGGCCAGGAGATGGGGTCTCTTCTTCTTTCTCCCCCTCCTCCTCCTCCTCCTCCTCTCCTGCTCCTGCATCATCTCCCACGCGCTTCCCTGCTGCTCAGGTCTGTGTGCTTGTTCCTCTGCTTCCATCTGCACCTTCAGACTTCAGTTCAGTGTGTATGAACTATCAGTGATGTACAGTTGCTGCTGGCGTCCACAAGGCCAGATCTTCATTTCTGTTCCCATGTTTTTCCCTTTTCCATTTGGCTAGCATATGACTAGGGTTTTTCATCATTCCTTTAATCCTACACCAGTTTTAAATGTATTTCGACTTGTACATTCCTGATTGGTTGCAAGAGCTTAGCGTGACGAGGGATTGGATTTGACCAAATTAACAATTTGGTCTTGTTTGAAAGAGAAATTTGATAATATACCATCCAATGAAATGGGGGAACCACCACATAACACTATTTCATCTCTTTTCTTACTATTAGTACAATAGTACAAGAGCATGGAAAGGAAATCTAATTTATCTATGTTCAATCCCACATCCCACCTAATGGATCATTAGTCCTTTTTAATTGCCTGAATCACGACCGTTTCCTACTCATGGGTATTACAAATTATGTCCTGATTTTTTTAATAAAAAACGACTACTCTTTGATTAAGTACTACTGAACTAGTACATCTTAAAAGGCT]




>consensus_10029#1
TCCCACCCTTATTTCTTGAGCTTCCCAGCAACACAGCACAAATATGGCCAGGAGATGGGG
TCTCTTCTTCTTTCTCCCCCTCCTCCTCCTCCTCCTCCTCTCCTGCTCCTGCATCATCTC
CCACGCGCTTCCCTGCTGCTCAGGTCTGTGTGCTTGTTCCTCTGCTTCCATCTGCACCTT
CAGACTTCAGTTCAGTGTGTATGAACTATCAGTGATGTACAGTTGCTGCTGGCGTCCACA
AGGCCAGATCTTCATTTCTGTTCCCATGTTTTTCCCTTTTCCATTTGGCTAGCATATGAC
TAGGGTTTTTCATCATTCCTTTAATCCTACACCAGTTTTAAATGTATTTCGACTTGTACA
TTCCTGATTGGTTGCAAGAGCTTAGCGTGACGAGGGATTGGATTTGACCAAATTAACAAT
TTGGTCTTGTTTGAAAGAGAAATTTGATAATATACCATCCAATGAAATGGGGGAACCACC
ACATAACACTATTTCATCTCTTTTCTTACTATTAGTACAATAGTACAAGAGCATGGAAAG
GAAATCTAATTTATCTATGTTCAATCCCACATCCCACCTAATGGATCATTAGTCCTTTTT
AATTGCCTGAATCACGACCGTTTCCTACTCATGGGTATTACAAATTATGTCCTGATTTTT
TTAATAAAAAACGACTACTCTTTGATTAAGTACTACTGAACTAGTACATCTTAAAAGGCT

consensusID : consensus_10029#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 502
fasta sequence

                              [ACAGATTGCTTACATACACCATCAGCACTTGTTATTATCCAAATACCTTAGGCTCAGGAACTGTGTTTTGGCATCGTCAATGTCGTTACCATCAAGCTCCGTGTCTGGGTACAATCCTGCATTGACAACTCCTACGGCATCATCCACTATTACTCCTACTACGTTATCTGGTTCAGGTCCATCAGTGCTGAACCCGGATGGCTCAGGCTCCGCCAGTAGTTCTGAGTTTGGTTCAGACATTCCAGCCACGAGCAATTCTTGGCGTTCAATCTCCCCCATGGCTGGTCCTTGGCAGCTTCGTTTTCATGCTTGCATGGGCATACATGATGAAAGGAACCATTTTGGAAACAGAGTGATTAAAACGATGTAAAGAGCTAGGGAATTCACTCGGCCAGTTGTATGGCGCCAGGTTGGGCCGGAACTAGGAAATACTTCCTCCATTTCATATTATAAGACTTTCTAACTTGTCCACATTCTAATGAATTTTGATATAAAAAAAAAA]

[+] EMBL BI806437             [ACAGATTGCTTACATACACCATCAGCACTTGTTATTATCCAAATACCTTAGGCTCAGGAACTGTGTTTTGGCATCGTCAATGTCGTTACCATCAAGCTCCGTGTCTGGGTACAATCCTGCATTGACAACTCCTACGGCATCATCCACTATTACTCCTACTACGTTATCTGGTTCAGGTCCATCAGTGCTGAACCCGGATGGCTCAGGCTCCGCCAGTAGTTCTGAGTTTGGTTCAGACATTCCAGCCACGAGCAATTCTTGGCGTTCAATCTCCCCCATGGCTGGTCCTTGGCAGCTTCGTTTTCATGCTTGCATGGGCATACATGATGAAAGGAACCATTTTGGAAACAGAGTGATTAAAACGATGTAAAGAGCTAGGGAATTCACTCGGCCAGTTGTATGGCGCCAGGTTGGGCCGGAACTAGGAAATACTTCCTCCATTTCATATTATAAGACTTTCTAACTTGTCCACATTCTAATGAATTTTGATATAAAAAAAAAA]




>consensus_10029#2
ACAGATTGCTTACATACACCATCAGCACTTGTTATTATCCAAATACCTTAGGCTCAGGAA
CTGTGTTTTGGCATCGTCAATGTCGTTACCATCAAGCTCCGTGTCTGGGTACAATCCTGC
ATTGACAACTCCTACGGCATCATCCACTATTACTCCTACTACGTTATCTGGTTCAGGTCC
ATCAGTGCTGAACCCGGATGGCTCAGGCTCCGCCAGTAGTTCTGAGTTTGGTTCAGACAT
TCCAGCCACGAGCAATTCTTGGCGTTCAATCTCCCCCATGGCTGGTCCTTGGCAGCTTCG
TTTTCATGCTTGCATGGGCATACATGATGAAAGGAACCATTTTGGAAACAGAGTGATTAA
AACGATGTAAAGAGCTAGGGAATTCACTCGGCCAGTTGTATGGCGCCAGGTTGGGCCGGA
ACTAGGAAATACTTCCTCCATTTCATATTATAAGACTTTCTAACTTGTCCACATTCTAAT
GAATTTTGATATAAAAAAAAAA

consensusID : consensus_10029#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 356
fasta sequence

                              [CCAGGAGATGGGGTCTNTTCTTCTTTNTCCCCCTCCTNCNNCNGCTNCTCCTCTCCTGCTCCTGCATCATCTCCCACGCGCTTCCCTGCTGCTCAGTTAAAACTGCAGGCAAACAAACTGCCCACGATGACCTGAATCCAGAACAGGCAACTAATCCAACGATGCCAATCACAGTCCCATCTACAAACCCAGCACCAATTATCATCACTGTTCCTTCCACAAACCCTACCATCACAATTCCTTCCTTGAATCCTCTCCCTACACCCATTACTGCCCCCTCAATGGTGAATCCTTCCACCTCACCTGCACCTGCGGCATACCNGCTACCGACGGCTTCAACCTCTNCTCCTTCTGCA]

[+] EMBL C93598               [CCAGGAGATGGGGTCTNTTCTTCTTTNTCCCCCTCCTNCNNCNGCTNCTCCTCTCCTGCTCCTGCATCATCTCCCACGCGCTTCCCTGCTGCTCAGTTAAAACTGCAGGCAAACAAACTGCCCACGATGACCTGAATCCAGAACAGGCAACTAATCCAACGATGCCAATCACAGTCCCATCTACAAACCCAGCACCAATTATCATCACTGTTCCTTCCACAAACCCTACCATCACAATTCCTTCCTTGAATCCTCTCCCTACACCCATTACTGCCCCCTCAATGGTGAATCCTTCCACCTCACCTGCACCTGCGGCATACCNGCTACCGACGGCTTCAACCTCTNCTCCTTCTGCA]




>consensus_10029#3
CCAGGAGATGGGGTCTNTTCTTCTTTNTCCCCCTCCTNCNNCNGCTNCTCCTCTCCTGCT
CCTGCATCATCTCCCACGCGCTTCCCTGCTGCTCAGTTAAAACTGCAGGCAAACAAACTG
CCCACGATGACCTGAATCCAGAACAGGCAACTAATCCAACGATGCCAATCACAGTCCCAT
CTACAAACCCAGCACCAATTATCATCACTGTTCCTTCCACAAACCCTACCATCACAATTC
CTTCCTTGAATCCTCTCCCTACACCCATTACTGCCCCCTCAATGGTGAATCCTTCCACCT
CACCTGCACCTGCGGCATACCNGCTACCGACGGCTTCAACCTCTNCTCCTTCTGCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10029#0      TTCTCCACTCCCAAATCGTATTTCTTGAGCTTCCCAGCAACACAGCACAAATATGGCCAG 60
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      ------------------------------------------------------------
                                                                                   

consensus_10029#0      GAGATGGGGTCTCTTCTTCTTTCTCCCCCTCCTCCTCCTCCTCCTCCTCTCCTGCTCCTG 120
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      ------------------------------------------------------------
                                                                                   

consensus_10029#0      CATCATCTCCCACGCGCTTCCCTGCTGCTCAGGCAAACAAACTGCCCACGATGACCTGAA 180
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      ------------------------------------------------------------
                                                                                   

consensus_10029#0      TCCAGAACAGGCAACTAATCCAACGATGCCAATCACAGTCCCATCTACAAACCCAGCACC 240
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      ------------------------------------------------------------
                                                                                   

consensus_10029#0      AATTATCATCACTGTTCCTTCCACAAACCCTACCATCACAATTCCTTCCTTGAATCCTCT 300
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      ------------------------------------------------------------
                                                                                   

consensus_10029#0      CCCTACACCCATTACTGCCCCCTCAATGGTGAATCCTTCCACCTCACCTGCACCTGCGGC 360
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      ------------------------------------------------------------
                                                                                   

consensus_10029#0      ATACCCGCTACCGACGCCTTCAACCTCTCCTCCTTCTGCATCATTAACCAACCCAACATC 420
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      ------------------------------------------------------------
                                                                                   

consensus_10029#0      AAACCCAATGACGCCTGCTATCAGCATGCCACCTCCTGCTCTCACCACAACTCCACCCAC 480
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      ------------------------------------------------------------
                                                                                   

consensus_10029#0      TGCCCCAGGTCTTTCTGGGCAGCAACTATGGTGTGTGGCCAAGGCTGACTCAGCAGATAT 540
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      -------------------------TCCCACCCTTATTTCTTGAGCTTCCCAGCAACACA 35
                                                                                   

consensus_10029#0      TGCACTTCAGAATGCACTGGACTACGCATGCGGCATTGGAGGAGCAGATTGCTTAGCAAT 600
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      GCACAAATATGGCCAGGAGATGGGGTCTCTTCTTCTTTCTCCCCCTCCTCCTCCTCCTCC 95
                                                                                   

consensus_10029#0      ACAACCATCAGGCACTTGTTATTATCCAAATACCTTAGGTGCGCATGCATCCTATGCTTT 660
consensus_10029#2      ------------------------------------------------------------
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      TCCTCTCCTGCTCCTGCATCATCTCCCACGCGCTTCCCTGCTGCTCAGGTCTGTGTGCTT 155
                                                                                   

consensus_10029#0      TAACAGCTATTACCAGAGGAGCCCTGCAACCTCCAGCT-GCGATTTTGGGGGGACGGCAA 719
consensus_10029#2      -------------------------------ACAGATT-GCTTACATACACCATCAGCAC 28
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      GTTCCTCTGCTTCCATCTGCACCTTCAGACTTCAGTTCAGTGTGTATGAACTATCAGTGA 215
                                                                                   

consensus_10029#0      T-TCTTGTCAA--TGTCA-ATCCCAGCTCAGGAAGCTGTGTTTTGGCATC--GTCAATGT 773
consensus_10029#2      T-TGTTATTAT--CCAAATACCTTAGGCTCAGGAACTGTGTTTTGGCATC--GTCAATGT 83
consensus_10029#3      ------------------------------------------------------------
consensus_10029#1      TGTACAGTTGCTGCTGGCGTCCACAAGGCCAGATCTTCATTTCTGTTCCCATGTTTTTCC 275
                                                                                   

consensus_10029#0      CGTTACCATCAAGCTC---CGTGTCTGGGTACAATCCTGCATTGACAACTCCTACGGCAT 830
consensus_10029#2      CGTTACCATCAAGCTC---CGTGTCTGGGTACAATCCTGCATTGACAACTCCTACGGCAT 140
consensus_10029#3      -------------CCA---GGAGATGGGGTCTNTTCTTCTTTNTCCCCCTCCTNCNNCNG 44
consensus_10029#1      CTTTTCCATTTGGCTAGCATATGACTAGGGTTTTTCATCATTCCTTTAATCCTACACCAG 335
                                    *        *    **     ** *   *       **** *  *  

consensus_10029#0      CATCCACTATTACTCCTACTACGTTATCTGGTTCAGGTCCATCAG-T--GC-TGAACCCG 886
consensus_10029#2      CATCCACTATTACTCCTACTACGTTATCTGGTTCAGGTCCATCAG-T--GC-TGAACCCG 196
consensus_10029#3      C-TNCTCCTCTCCTGCTCCTGCATCATCTCCCACGCGCTTCCCTGCT--GC-TCAGTTAA 100
consensus_10029#1      TTTTAAATGTATTTCGACTTGTACATTCCTGATTGGTTGCAAGAGCTTAGCGTGACGAGG 395
                         *          *     *      **                * *  ** * *     

consensus_10029#0      GATGGCT------CAGGCTCCGCCAGTAGTTCTGAGTTTGGTTCAGACATTCCAGCCACG 940
consensus_10029#2      GATGGCT------CAGGCTCCGCCAGTAGTTCTGAGTTTGGTTCAGACATTCCAGCCACG 250
consensus_10029#3      AACTGCAGGCAAACAAACTGCCCACGATGACCTGAATCCAGAACAGGCAACTAATCCAAC 160
consensus_10029#1      GATTGGATTTGACCAAATTAACAATTTGGTCTTG--TTTGAAAGAGAAATTTGATAATAT 453
                        *  *        **   *         *   **  *       **  *    *      

consensus_10029#0      AGCAATTCTTGGCGTTCAATCTCC---CCCAATGGCTGGTCCTTGGCAGCTTCGTTTTCA 997
consensus_10029#2      AGCAATTCTTGGCGTTCAATCTCC---CCCA-TGGCTGGTCCTTGGCAGCTTCGTTTTCA 306
consensus_10029#3      GATGCCAATCACAGTCCCATCTACAAACCCA-GCACCAATTATCATCACTGTTCCTTCCA 219
consensus_10029#1      ACCATCCAATGAAATGGGGGAACCA--CCACATAACACTATTTCATCTCTTTTCTTACTA 511
                                     *        *   **      *      *   *    *   *   *

consensus_10029#0      ATGCTTGCATGG-GCATACATGATGAAAGGAACAATTTTGGAAACAGAGTGATTAAAACG 1056
consensus_10029#2      -TGCTTGCATGG-GCATACATGATGAAAGGAACCATTTTGGAAACAGAGTGATTAAAACG 364
consensus_10029#3      CAAACCCTACCA-TCACAATTCCTTCCTTGAATCCTCTCCC---TACACCCATTACTGCC 275
consensus_10029#1      TTAGTACAATAGTACAAGAGCATGGAAAGGAAATCTAATTTATCTATGTTCAATCCCACA 571
                               *     **             ***   *         *     * *    * 

consensus_10029#0      ATGTA---AAGAGCTAGGGAATTCACTCGGCCAAGTTGTATGGCGCGCAGGTTGGGCC-- 1111
consensus_10029#2      ATGTA---AAGAGCTAGGGAATTCACTCGGCCA-GTTGTATGGCGC-CAGGTTGGGCC-- 417
consensus_10029#3      CCCTC---AATGGTGAATCCTTCCACCTCACCTGCACCTGCGGCATACCNGCT--ACC-- 328
consensus_10029#1      TCCCACCTAATGGATCATTAGTCCTTTTTAATTGCCTGAATCACGACCGTTTCCTACTCA 631
                               **  *        * *                   *   *        *   

consensus_10029#0      --GGAACTAGGAAATACTTCCTCCATTTCATATTATAAGACTTTCTAACATTGTCCACAT 1169
consensus_10029#2      --GGAACTAGGAAATACTTCCTCCATTTCATATTATAAGACTTTCTAAC-TTGTCCACAT 474
consensus_10029#3      --GACGGCTTCAACCTCTNCTCCTTCTGCA------------------------------ 356
consensus_10029#1      TGGGTATTACAAATTATGTCCTGATTTTTTTAATAAAAAACGACTACTCTTTGATTAAGT 691
                         *        **      *      *                                 

consensus_10029#0      TCTAATGAATTTTGATATATATAAAAAAAAAAAAAAAAAAAAAA 1213
consensus_10029#2      TCTAATGAATTTTGATATAAAAAAAAAA---------------- 502
consensus_10029#3      --------------------------------------------
consensus_10029#1      ACTACTGAACTAGTACATCTTAAAAGGCT--------------- 720