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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10037#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2366 fasta sequence
[CCCCCTCGCCGACGGCGAGGCGGGCGACCCCGGTGGGATCCTGTGAGCCGGCGACGGCTTCCCCCAACTCCCGCCTCGCCGCGCGCCGATGTTGCCGTCTCCCTGCGCGATTCCGCCGCCGCCGCAATGTATTTATTCGGTGTTCGCCATTTCTAGTCAATCGTCAAAGAAAGCCGGATGCAAAATGTGGACAACTATCTGGACCAGTGCTCAAGAAAAAAGGTTAAAGCTGAGAAAGAAGTGTTCTTTTTTACCAAAATTGACGAAGGACTTCTTCATCTGATAGAAATATATGGGGTCACTAAACTTGTTATGGGTGCTGCATCAGACAGACACTACAAAAGAAAAATGAAAGCACCACAATCACAAACAGCAATAAGTGTGATGCAAAGAGCACATTCATACTGCAATATATGGTTTATTTGCAACGGGAAGCTAACATGTGTCGGGGAGGCCAGTTGTTGCCCTGTAAAAAGGTCAAAATCAGCACGCCTACCTTCTTCTGTAGACAGTTGCAAGGTGGATCTTCAAAGTTTGCTTGAGCCTAATATAGAGGCTAAAAGATTGGGATGCATGTATATTAATGAAATGGAACTAAGGAAAGAGACAGAGGCAAAACTCTCACAAGAAAAGGAAGAGTCAGAATCTCTCAAACATGCCACTATGGTGCTCCAAAATGACCTGGACTGGCTCAAATATCAGTTGAATGAGAAAGCCAATAGATTACAAGATCTAAACCAACAGAAGCACCTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTCACTGAAGTTAGAGTACAGTAAAATGAAGCGAGAGCGAGATGATGCAGTTAAAGAGGCAAGGAGCATGCGTATAGAGAAGGAGCTGACGAATTCTTGTGCCTATGGAGCAATAAGCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACC-TCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAG-AGCAAACTCAGTGATTTTGGGATTTCACGCCTCCTTCTGGAGTCCAGTGTCACTGGAAGCGACGCACACTACACCTCCAGGCCTATGGGAACACCGGCATACATGGACCCAGAGTTCTTCGCCACAGGGGAGCTGACGCCACAGTCTGATACTTACTCTTTTGGTGTTACCATCATGCGTCTCTTGACCGGACGGGCACCTCTACGCCTGATTAGGACAGTGCGGGAGGCGCTGAACGACTATGACCTGCAGTCAGTGTTGGACCATTCTGCAGGTGACTGGCCATTGGTGCATGTGGAGCAGCTCGCACACATTGCGCTGCAGTGCACAGAGCTCAGCAAGCAGAGGCGCCCTGATCTTGAGCATGATGTGTGGGAGGTGATTGAACCTATGAAGAAGGAAGCTCATTCGCCATTGTCCCAGTCTTTTCGATCTATCTGTAGTGCCATTGAAACTGCCACCCCGTCCTACTTCCTTTGCCCAATCTCTCAGGTGACCATGAGAGATCCTCAGATGGCAGCGG-ATGGCTTCACC--TA-TG-AAGC-TGA-TGC-TAT-AAGA-GA--TTGGCTGGATAAGGG-ACATGACAGGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCGCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAATTAAGGGTTGGGTCTTCTTTGAACTAATTCATGTGGAAATCCTACAAAACTGTGTGTTAAATTCCAGCATTCTAAATGAGAT]
[+] EMBL AK073764 [CCCCCTCGCCGACGGCGAGGCGGGCGACCCCGGTGGGATCCTGTGAGCCGGCGACGGCTTCCCCCAACTCCCGCCTCGCCGCGCGCCGATGTTGCCGTCTCCCTGCGCGATTCCGCCGCCGCCGCAATGTATTTATTCGGTGTTCGCCATTTCTAGTCAATCGTCAAAGAAAGCCGGATGCAAAATGTGGACAACTATCTGGACCAGTGCTCAAGAAAAAAGGTTAAAGCTGAGAAAGAAGTGTTCTTTTTTACCAAAATTGACGAAGGACTTCTTCATCTGATAGAAATATATGGGGTCACTAAACTTGTTATGGGTGCTGCATCAGACAGACACTACAAAAGAAAAATGAAAGCACCACAATCACAAACAGCAATAAGTGTGATGCAAAGAGCACATTCATACTGCAATATATGGTTTATTTGCAACGGGAAGCTAACATGTGTCGGGGAGGCCAGTTGTTGCCCTGTAAAAAGGTCAAAATCAGCACGCCTACCTTCTTCTGTAGACAGTTGCAAGGTGGATCTTCAAAGTTTGCTTGAGCCTAATATAGAGGCTAAAAGATTGGGATGCATGTATATTAATGAAATGGAACTAAGGAAAGAGACAGAGGCAAAACTCTCACAAGAAAAGGAAGAGTCAGAATCTCTCAAACATGCCACTATGGTGCTCCAAAATGACCTGGACTGGCTCAAATATCAGTTGAATGAGAAAGCCAATAGATTACAAGATCTAAACCAACAGAAGCACCTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTCACTGAAGTTAGAGTACAGTAAAATGAAGCGAGAGCGAGATGATGCAGTTAAAGAGGCAAGGAGCATGCGTATAGAGAAGGAGCTGACGAATTCTTGTGCCTATGGAGCAATAAGCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACC TCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAG AGCAAACTCAGTGATTTTGGGATTTCACGCCTCCTTCTGGAGTCCAGTGTCACTGGAAGCGACGCACACTACACCTCCAGGCCTATGGGAACACCGGCATACATGGACCCAGAGTTCTTCGCCACAGGGGAGCTGACGCCACAGTCTGATACTTACTCTTTTGGTGTTACCATCATGCGTCTCTTGACCGGACGGGCACCTCTACGCCTGATTAGGACAGTGCGGGAGGCGCTGAACGACTATGACCTGCAGTCAGTGTTGGACCATTCTGCAGGTGACTGGCCATTGGTGCATGTGGAGCAGCTCGCACACATTGCGCTGCAGTGCACAGAGCTCAGCAAGCAGAGGCGCCCTGATCTTGAGCATGATGTGTGGGAGGTGATTGAACCTATGAAGAAGGAAGCTCATTCGCCATTGTCCCAGTCTTTTCGATCTATCTGTAGTGCCATTGAAACTGCCACCCCGTCCTACTTCCTTTGCCCAATCTCTCAGGTGACCATGAGAGATCCTCAGATGGCAGCGG ATGGCTTCACC TA TG AAGC TGA TGC TAT AAGA GA TTGGCTGGATAAGGG ACATGACAGGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCGCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAATTAAGGGTTGGGTCTTCTTTGAACTAATTCATG ]
[+] EMBL AK064032 [ GTGTGATGCAAAGAGCACATTCATACTGCAATATATGGTTTATTTGCAACGGGAAGCTAACATGTGTCAGGGAGGCCAGTTGTTGCCCTGTAAAAAGGTCAAAATCAGCACGCCTACCTTCTTCTGTAGACAGTTGCAAGGTGGATCTTCAAAGTTTGCTTGAGCCTAATATAGAGGCTAAAAGATTGGGATGCATGTATATTAATGAAATGGAACTAAGGAAAGAGACAGAGGCAAAACTCTCACAAGAAAAGGAAGAGTCAGAATCTCTCAAACATGCCACTATGGTGCTCCAAAATGACCTGGACTGGCTCAAATATCAGTTGAATGAGAAAGCCAATAGATTACAAGATCTAAACCAACAGAAGCACCTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTCACTGAAGTTAGAGTACAGTAAAATGAAGCGAGAGCGAGATGATGCAGTTAAAGAGGCAAGGAGCATGCGTATAGAGAAGGAGCTGACGAATTCTTGTGCCTATGGAGCAATAAGCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACC TCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAG AGCAAACTCAGTGATTTTGGGATTTCACGCCTCCTTCTGGAGTCCAGTGTCACTGGAAGCGACGCACACTACACCTCCAGGCCTATGGGAACACCGGCATACATGGACCCAGAGTTCTTCGCCACAGGGGAGCTGACGCCACAGTCTGATACTTACTCTTTTGGTGTTACCATCATGCGTCTCTTGACCGGACGGGCACCTCTACGCCTGATTAGGACAGTGCGGGAGGCGCTGAACGACTATGACCTGCAGTCAGTGTTGGACCATTCTGCAGGTGACTGGCCATTGGTGCATGTGGAGCAGCTCGCACACATTGCGCTGCAGTGCACAGAGCTCAGCAAGCAGAGGCGCCCTGATCTTGAGCATGATGTGTGGGAGGTGATTGAACCTATGAAGAAGGAAGCTCATTTGCCATTGTCCCAGTCTTTTCGATCTATCTGTAGTGCCATTGAAACTGCCACCCCGTCCTACTTCCTTTGCCCAATCTCTCAGGTGACCATGAGAGATCCTCAGATGGCAGCGG ATGGCTTCACC TA TG AAGC TGA TGC TAT AAGA GA TTGGCTGGATAAGGG ACATGACAGGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCGCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAATTAAGGGTTGGGTCTTCTTTGAACTAATTCATGTGGAAATCCTACAAAACTGTGTGTTAAATTCCAGCATTCTAAATGAGAT]
[+] EMBL OSS14953A [ TCTCACAAGAAAAGGAAGAGTCAGAATCTCTCAAACATGCCACTATGGTGCTCCAAAATGACCTGGACTGGCTCAAATATCAGTTGAATGAGAAAGCCAATAGATTACAAGATCTAAACCAACAGAAGCACCTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTC ]
[+] EMBL CB666071 [ CTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTCACTGAAGTTAGAGTACAGTAAAATGAAGCGAGAGCGAGATGATGCAGTTAAAGAGGCAAGGAGCATGCGTATAGAGAAGGAGCTGACGAATTCTTGTGCCTATGGAGCAATAAGCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACC TCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAG AGCAAACTCAGTGATTTTGGGATTTCACGCCTCCTTCTGGAGTCCAGTGTCACTGGAAGCGACGCACACTACACCTCCAGGCCTATGGGAACACCGGCATACATGGACCCAGAGTTCTTCGCCACAGGGGAGCTGACGCCACAGTCTGATACTTACTCTTTTGGTG TACCATCATGCGTCTCTTG ]
[+] EMBL BP184834 [ GCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACCTTCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAGAAGCAAA ]
[-] EMBL CB666072 [ TCTTGACCGGACGGGCACCTCTACGCCTGATTAGGACAGTGCGGGAGGCGCTGAACGACTATGACCTGCAGTCAGTGTTGGACCATTCTGCAGGTGACTGGCCATTGGTGCATGTGGAGCAGCTCGCACACATTGCGCTGCAGTGCACAGAGCTCAGCAAGCAGAGGCGCCCTGATCTTGAGCATGATGTGTGGGAGGTGATTGAACCTATGAAGAAGGAAGCTCATTCGCCATTGTCCCAGTCTTTTCGATCTATCTGTAGTGCCATTGAAACTGCCACCCCGTCCTACTTCCTTTGCCCAATCTCTCAGGTGACCATGAGAGATCCTCAGATGGCAGCGG ATGGCTTCACC TA TG AAGC TGA TGC TAT AAGA GA TTGGCTGGATAAGGG ACATGACAGGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCGCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAATTAAGGGTTGGGTCTTCTTTGAACTAATTCATGTGGAAATCCTACAGAACTGTGTGTTAAATTC ]
[+] EMBL AU075517 [ caaatTGGCACCGGAATGGCTTCACCNTTATTGAAAGCTTGATTGCTTATAAAGANGAATTTGGCTCGATAAGGGAACATGACANGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCNCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAAT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||