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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10042#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2286 fasta sequence
[AGGGCAAAAAAAAGGAAAAAAAGGAAAAGGAAAAGGAAACGCCTCGCCGGGAATGGGCAAGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCGATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACCGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGCGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAATGGACATCGTACGCAGCCACCATTTGATCTGCAACGGCAAGTAATGAATGGATCCTTTATCGCAGATGTACTGAGAGCTTCTTTTGCCAGTCGAAATAATGGATACAATTGGTCTAACGAGCGCAAATTGGAAAGAATTGAAGATTACTCAGGGTCTATCGGTAAATGGTCAGCAAAAAGTGGGAGAAAACCAATTCTGACAGAAGAAAGTAGCCGAAGCACTTATTGTCAGCCTCAACCTTCGAGTTCAATATATGAGCTGCCGGTGTCGTCCTCATACAACGAGACAAGGAAGCTGCTAGTTCCAGTTGGGGTTCAGTTGCAGCAGTCCTATCCCCGCAGCTTGGCACGTTTTGCTGCGCAGCTAGGTCCTGTCGCTTGGGAGATTGCGTCCAAACGAATTGAACGTGCCCTTCCCCCAGGAACAAAGTTTGGCCGTGGGTGGGTAGGAGACGGTGAAGCACCGAACGCAACTCAGCCACCAGTGCTTACTACATCTTCAACAGCCTTGATACACCCAAGTAGTACAGAAACATCAAGTGAACAGCCAACTCATAACGGTACGGCCAGCACAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAATCACAACTCATAGGGTCAATTGTCAGTCATTACCAAGCCAGCAACACGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGATCAAACATATTCCCTTCTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAGCTAGCTAGTAGAGAGACCTGAGATCAACATAGTGAATTTAACATTTGGATGCAGAGCTCCAGTGAATTGTCCATCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCAACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCATGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAGATTATTCATCAGTGTTTATGATTGGTTGACATTATCTGTTCTCCATTTGGTAGAATTAGATAGCATAGCAGATCATATATAGGCTTGCAAGATATGAAAGTTCATCACAAACTCTCATCAAATACATTGAGATGCAGT]
[+] EMBL CB628444 [AGGGCAAAAAAAAGGAAAAAAAGGAAAAGGAAAAGGAAACGCCTCGCCGGGAATGGGCAAGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCTATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACTGGAAATTAA ]
[+] EMBL AK067716 [ AAAAGGAAAAGGAAAAGGAAACGCCTCGCCGGGAATGGGCAAGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCGATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACCGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGCGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAATGGACATCGTACGCAGCCACCATTTGATCTGCAACGGCAAGTAATGAATGGATCCTTTATCGCAGATGTACTGAGAGCTTCTTTTGCCAGTCGAAATAATGGATACAATTGGTCTAACGAGCGCAAATTGGAAAGAATTGAAGATTACTCAGGGTCTATCGGTAAATGGTCAGCAAAAAGTGGGAGAAAACCAATTCTGACAGAAGAAAGTAGCCGAAGCACTTATTGTCAGCCTCAACCTTCGAGTTCAATATATGAGCTGCCGGTGTCGTCCTCATACAACGAGACAAGGAAGCTGCTAGTTCCAGTTGGGGTTCAGTTGCAGCAGTCCTATCCCCGCAGCTTGGCACGTTTTGCTGCGCAGCTAGGTCCTGTCGCTTGGGAGATTGCGTCCAAACGAATTGAACGTGCCCTTCCCCCAGGAACAAAGTTTGGCCGTGGGTGGGTAGGAGACGGTGAAGCACCGAACGCAACTCAGCCACCAGTGCTTACTACATCTTCAACAGCCTTGATACACCCAAGTAGTACAGAAACATCAAGTGAACAGCCAACTCATAACGGTACGGCCAGCACAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAATCACAACTCATAGGGTCAATTGTCAGTCATTACCAAGCCAGCAACACGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGATCAAACATATTCCCTTCTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAGCTAGCTAGTAGAGAGACCTGAGATCAACATAGTGAATTTAACATTTGGATGCAGAGCTCCAGTGAATTGTCCGTCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCAACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCATGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAGATTATTCATCAGTGTTTATGATTGGTTGACATTATCTGTTCTCCATTTGGTAGAATTAGATAGCATAGCAGATCATATATAGGCTTGCAAGATATGAAAGTTCATCACAAACTCTCATCAAATACATTGAGATGCAGT]
[+] EMBL AK119235 [ AAAAGGAAAAGGAAACGCCTCGCCGGGAATGGGCAAGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCGATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACCGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGCGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAATGGACATCGTACGCAGCCACCATTTGATCTGCAACGGCAAGTAATGAATGGATCCTTTATCGCAGATGTACTGAGAGCTTCTTTTGCCAGTCGAAATAATGGATACAATTGGTCTAACGAGCGCAAATTGGAAAGAATTGAAGATTACTCAGGGTCTATCGGTAAATGGTCAGCAAAAAGTGGGAGAAAACCAATTCTGACAGAAGAAAGTAGCCGAAGCACTTATTGTCAGCCTCAACCTTCGAGTTCAATATATGAGCTGCCGGTGTCGTCCTCATACAACGAGACAAGGAAGCTGCTAGTTCCAGTTGGGGTTCAGTTGCAGCAGTCCTATCCCCGCAGCTTGGCACGTTTTGCTGCGCAGCTAGGTCCTGTCGCTTGGGAGATTGCGTCCAAACGAATTGAACGTGCCCTTCCCCCAGGAACAAAGTTTGGCCGTGGGTGGGTAGGAGACGGTGAAGCACCGAACGCAACTCAGCCACCAGTGCTTACTACATCTTCAACAGCCTTGATACACCCAAGTAGTACAGAAACATCAAGTGAACAGCCAACTCATAACGGTACGGCCAGCACAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAATCACAACTCATAGGGTCAATTGTCAGTCATTACCAAGCCAGCAACACGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGATCAAACATATTCCCTTCTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAGCTAGCTAGTAGAGAGACCTGAGATCAACATAGTGAATTTAACATTTGGATGCAGAGCTCCAGTGAATTGTCCATCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCAACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCATGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAGATTATTCATCAGTGTTTATGATTGGTTGACATTATCTGTTCTCCATTTGGTAGAATTAGATAGCATAGCAGATCATATATAGGCTTGCAAGATATGAA ]
[+] EMBL CB640587 [ AGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTG ]
[+] EMBL CB646221 [ CCGCACCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCGATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACCGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGCGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAATGGAC ]
[-] EMBL CB646153 [ CAGAAACATCAAGTGAACAGCCAACTCATAACGGTACGGCCAGCACAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAATCACAACTCATAGGGTCAATTGTCAGTCATTACCAAGCCAGCAACACGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGATCAAACATATTCCCTTTTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAGCTAGCTAGTAGAGAGACCTGAGATCAACATAGTGAATTTAACATTTGGATGCAGAGCTCCAGTGAATTGTCCATCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCAACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCATGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAAAAGATTCATCAGTGTTTATGATTG ]
[-] EMBL CB628445 [ ACATTTCGATGCAGAGCTCCAGTGAATTGTCCATCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCGACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCGTGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAGATTATTCATCAGTGTTTATGA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||