These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10042#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2286 fasta sequence [AGGGCAAAAAAAAGGAAAAAAAGGAAAAGGAAAAGGAAACGCCTCGCCGGGAATGGGCAAGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCGATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACCGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGCGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAATGGACATCGTACGCAGCCACCATTTGATCTGCAACGGCAAGTAATGAATGGATCCTTTATCGCAGATGTACTGAGAGCTTCTTTTGCCAGTCGAAATAATGGATACAATTGGTCTAACGAGCGCAAATTGGAAAGAATTGAAGATTACTCAGGGTCTATCGGTAAATGGTCAGCAAAAAGTGGGAGAAAACCAATTCTGACAGAAGAAAGTAGCCGAAGCACTTATTGTCAGCCTCAACCTTCGAGTTCAATATATGAGCTGCCGGTGTCGTCCTCATACAACGAGACAAGGAAGCTGCTAGTTCCAGTTGGGGTTCAGTTGCAGCAGTCCTATCCCCGCAGCTTGGCACGTTTTGCTGCGCAGCTAGGTCCTGTCGCTTGGGAGATTGCGTCCAAACGAATTGAACGTGCCCTTCCCCCAGGAACAAAGTTTGGCCGTGGGTGGGTAGGAGACGGTGAAGCACCGAACGCAACTCAGCCACCAGTGCTTACTACATCTTCAACAGCCTTGATACACCCAAGTAGTACAGAAACATCAAGTGAACAGCCAACTCATAACGGTACGGCCAGCACAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAATCACAACTCATAGGGTCAATTGTCAGTCATTACCAAGCCAGCAACACGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGATCAAACATATTCCCTTCTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAGCTAGCTAGTAGAGAGACCTGAGATCAACATAGTGAATTTAACATTTGGATGCAGAGCTCCAGTGAATTGTCCATCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCAACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCATGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAGATTATTCATCAGTGTTTATGATTGGTTGACATTATCTGTTCTCCATTTGGTAGAATTAGATAGCATAGCAGATCATATATAGGCTTGCAAGATATGAAAGTTCATCACAAACTCTCATCAAATACATTGAGATGCAGT] [+] EMBL CB628444 [AGGGCAAAAAAAAGGAAAAAAAGGAAAAGGAAAAGGAAACGCCTCGCCGGGAATGGGCAAGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCTATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACTGGAAATTAA ] [+] EMBL AK067716 [ AAAAGGAAAAGGAAAAGGAAACGCCTCGCCGGGAATGGGCAAGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCGATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACCGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGCGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAATGGACATCGTACGCAGCCACCATTTGATCTGCAACGGCAAGTAATGAATGGATCCTTTATCGCAGATGTACTGAGAGCTTCTTTTGCCAGTCGAAATAATGGATACAATTGGTCTAACGAGCGCAAATTGGAAAGAATTGAAGATTACTCAGGGTCTATCGGTAAATGGTCAGCAAAAAGTGGGAGAAAACCAATTCTGACAGAAGAAAGTAGCCGAAGCACTTATTGTCAGCCTCAACCTTCGAGTTCAATATATGAGCTGCCGGTGTCGTCCTCATACAACGAGACAAGGAAGCTGCTAGTTCCAGTTGGGGTTCAGTTGCAGCAGTCCTATCCCCGCAGCTTGGCACGTTTTGCTGCGCAGCTAGGTCCTGTCGCTTGGGAGATTGCGTCCAAACGAATTGAACGTGCCCTTCCCCCAGGAACAAAGTTTGGCCGTGGGTGGGTAGGAGACGGTGAAGCACCGAACGCAACTCAGCCACCAGTGCTTACTACATCTTCAACAGCCTTGATACACCCAAGTAGTACAGAAACATCAAGTGAACAGCCAACTCATAACGGTACGGCCAGCACAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAATCACAACTCATAGGGTCAATTGTCAGTCATTACCAAGCCAGCAACACGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGATCAAACATATTCCCTTCTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAGCTAGCTAGTAGAGAGACCTGAGATCAACATAGTGAATTTAACATTTGGATGCAGAGCTCCAGTGAATTGTCCGTCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCAACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCATGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAGATTATTCATCAGTGTTTATGATTGGTTGACATTATCTGTTCTCCATTTGGTAGAATTAGATAGCATAGCAGATCATATATAGGCTTGCAAGATATGAAAGTTCATCACAAACTCTCATCAAATACATTGAGATGCAGT] [+] EMBL AK119235 [ AAAAGGAAAAGGAAACGCCTCGCCGGGAATGGGCAAGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCGATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACCGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGCGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAATGGACATCGTACGCAGCCACCATTTGATCTGCAACGGCAAGTAATGAATGGATCCTTTATCGCAGATGTACTGAGAGCTTCTTTTGCCAGTCGAAATAATGGATACAATTGGTCTAACGAGCGCAAATTGGAAAGAATTGAAGATTACTCAGGGTCTATCGGTAAATGGTCAGCAAAAAGTGGGAGAAAACCAATTCTGACAGAAGAAAGTAGCCGAAGCACTTATTGTCAGCCTCAACCTTCGAGTTCAATATATGAGCTGCCGGTGTCGTCCTCATACAACGAGACAAGGAAGCTGCTAGTTCCAGTTGGGGTTCAGTTGCAGCAGTCCTATCCCCGCAGCTTGGCACGTTTTGCTGCGCAGCTAGGTCCTGTCGCTTGGGAGATTGCGTCCAAACGAATTGAACGTGCCCTTCCCCCAGGAACAAAGTTTGGCCGTGGGTGGGTAGGAGACGGTGAAGCACCGAACGCAACTCAGCCACCAGTGCTTACTACATCTTCAACAGCCTTGATACACCCAAGTAGTACAGAAACATCAAGTGAACAGCCAACTCATAACGGTACGGCCAGCACAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAATCACAACTCATAGGGTCAATTGTCAGTCATTACCAAGCCAGCAACACGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGATCAAACATATTCCCTTCTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAGCTAGCTAGTAGAGAGACCTGAGATCAACATAGTGAATTTAACATTTGGATGCAGAGCTCCAGTGAATTGTCCATCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCAACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCATGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAGATTATTCATCAGTGTTTATGATTGGTTGACATTATCTGTTCTCCATTTGGTAGAATTAGATAGCATAGCAGATCATATATAGGCTTGCAAGATATGAA ] [+] EMBL CB640587 [ AGCAGCAGCCGCAGCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTG ] [+] EMBL CB646221 [ CCGCACCCGCCACCGGCGGCGATGTCGGCGCCACCGCGGAAGCGGAAGAAGAAGGGGCGGCCCTCCCTCCTCGACCTCCAGAAGCGGACCCTCCGCCTCGAGAAGCTGCAGGAGCCGCCGCCGCCGCCACCGCCCCCGCAGCCGCGGCGGTCCACGCGGAGGAACCCCGCCGGCGTCGACTCCGGCGACGAGGGGACGGCACCCGGCGGCCGCCGCGAGAAGAAGCTCCGCCTCGTCATGGGCCTCCCCGACGGATCGGCCAAGGGAGAAAAGACGAGGAAAGCGACGGATGGGAGTGAAGAGCCGTCAGATTCCGGGCCCACGACACCTTTGCCGGACAAAAAGTTGTTAGTCTTCGTCCTTGATAGGCTGCAGAAGAAGGACACATATGGTGTATTCTCTGACCCTGTTGACCCCGAAGAGCTGCCTGATTACCATGATATTATCAAGCATCCAATGGATTTTTCAACAATTCGGAAGAAGCTCAATAAAGGGGCTTATGGCAACTTGGAGCAATTTGAGGATGATGTATTCTTGTTAACCTCAAATGCGATGTGCTACAATTCACCAGATACAATATACTATCGACAGGCACGGGCGATCCAAGAGCTTGCCAAGAAGGACTTTGAGAACCTTAGGCAGGATAGTGATGCAAGTGAGCCAGAACCAGAACCGGAAATTAAACCAGATCCTGAACCAAAGCCACAACCACGGAGGGGCAGGCCTCCAAATAAGAACACTATCAAACAGAAAGTTGGGAAGCCACCGGTAGAACGCGCTACTGCAGACTTTTCTGGAGCAACACTCGCTAGTGTTGGAAATAATGGAC ] [-] EMBL CB646153 [ CAGAAACATCAAGTGAACAGCCAACTCATAACGGTACGGCCAGCACAAGCCATTCAGCAGGACCTCAGCCATCTTCCGCACCATATGCCTCTTCTACAATCACAACTCATAGGGTCAATTGTCAGTCATTACCAAGCCAGCAACACGGATCAGTGCCACAGGTTTCAGCAGAAAGAGGTGAACATGGTGCTGAGGTGAAGGGCAACCATAATAATCTTCATGAACGGCCAGCCATTCAGCACACTGTTAATGGCTTCAGTGCTGTTTCAGGATCAAACATATTCCCTTTTGCGGCACAGATGGTGGCGAATCGGATGCAGACACATACAGCTGATTAGCTAGCTAGTAGAGAGACCTGAGATCAACATAGTGAATTTAACATTTGGATGCAGAGCTCCAGTGAATTGTCCATCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCAACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCATGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAAAAGATTCATCAGTGTTTATGATTG ] [-] EMBL CB628445 [ ACATTTCGATGCAGAGCTCCAGTGAATTGTCCATCATGATCACCAAGCAACAAGGGCCTGCTCACACTAGGCACTAGCGACTCAGCACCAACTGTCCAAAAACCTCGGATGATCCAAGTTCTGACAAGTGGCAAGTCTTGTGAGCCGTGTCGATCCACCACGCCGTGAATTGGCATTGCATTTGCGAAAACATGTTGTGTGATTGATTAGAAACATAGGATAGCATGCAGAAAATTGCAGAGTAATATGTAGGGGGAGGTGTATTCAGCAGTGTGTAGTAACAGCGGTGAGTTCCAGTTGGAGATTCAACGATTCTGATGTGTAGAAACCACAGGGAAAACTTTCTGTATAGATTATTCATCAGTGTTTATGA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||