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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10046#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3398 fasta sequence
[CTCTCTCTCTCTCTCTCCCGTGTCCGCAACCGCAAATCCCCATTTGGTCTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAGCCCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT-GGAGGAGCCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAGTATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAACTTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTACTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTAATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGTCAAATGGTTTCTGGGCACTTGAAGGCTTTTTCTTTTTTGCAGTTGCAGTGGGATTTGGAAGAATGTGATATTCATAGCTTTTGCGTTCACCTTGGAAATTTCTGGTTTGAGGCTGAGTTCAGCTGCTATGACCTTAAGACCTTGATTGCCATTGAGCTTTATTTCTAAATCTGCATAGTGATCTCCTGTAGCCAACTAGCCATGGGAAATAGGTGAAAGTTCACTTTGCGTTTATAATCTCTTGAAAGAGTATAAATTAATGGATAATGCCTCATCAGCAAACACTGCATCTCCATTGGAGATTTTGGAATGTGCTTTTGTTTTTCTGATAAAGTAAGTATCTAGAACATTTCTATAGGATTCAAGCATAGTAATGGTACTGGCGCCCTGTGGACACTGCATAGGCTTGACTCTTTCTAGTGCGATGTGCTGATTGAAAAGTGCATACTAGGGTGTAGGTAATGTTCATCCTGTCATAAACTCATGCGGACTTTTTAGCTTGTGCTTGCTGTCAGAATGTGGTCCCTCTAAATATGAGCTGTTTTAGCAGAAGGTTATGGTCTGCTGACAGTGATCTTTGCTTTGTGCTGAGGAAGGATAGCATTCAAAACATTCATACAGCCCATAACCATATGTGTTCTATTTCTTATATGCACCATAAGCGCAATCATTAAGTACGGCAGTTGAAACCTTTGCTTTAGAGTTCTTATCCTATTGTCTATAGAGTCGCAACAACTATGCCCATCCATCAGATGTAGATCTGATTTTCAAAGTTGCCCCCCTTTCCAAATTTGTCACAAAACCATCTAGTTTCAAGGCTTACAACAGTAGATCAAGCACACCAAATGGCTTTACATTGCTAAATGTCGTGAAGTTATTGTCACTAGCTAGAATTTGCGCATGATGAAGTTACAGAGACTATTGAGGTCTCCGTAAGTTTGCTACATATCATTTCCCTGTTATTTTCCATGTCATGGAAGAAATCTCCATCTAATTGATCAACTTTCACGTTTTGTCTGGTACAACTAAATTTTTGTTGTGAGAACTCGATTAGTCAATTATAGGCACCATTCTTGTTACAAATGAACATAATCTTTCATATGTGGTGGTAAAAATCTTTACAATATAATCATTACTGCTGAATTGTTGTTTATATTGTTGGATTTCCTTAGTATCATCTTTCTTGAAATGGATTTTTTTTTGTTTCTTCTAGTTGTGTATACTGGCAGCAGAGACGACCAGTTATTATTTGATGATGATTACATACTTCATGTATCCAATGGGTATATTGCTTTATATCTGGCAGTCACTA]
[+] EMBL AK058405 [CTCTCTCTCTCTCTCTCCCGTGTCCGCAACCGCAAATCCCCATTTGGTCTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAGCCCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT GGAGGAGCCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGT ]
[+] EMBL AK101408 [ AACCGCAAATCCCCATTTGGTCTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAGCCCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT GGAGGAGCCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAGTATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAACTTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTACTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTAATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGTCAAATG ]
[+] EMBL AK065789 [ GGTCTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAG CCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAAC CTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT GGAGGAGCCAACGAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAGTATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAACTTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTACTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTAATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGTCAAATG ]
[+] EMBL AK119286 [ CTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAGCCCCGGGGGACCATCCACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGACGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT GGAGGAGCCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAGTATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAGCTTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTACTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTAATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGTCAAATGGTTTCTGGGCACTTGAAGGCTTTTTCTTTTTTGCAGTTGCAGTGGGATTTGGAAGAATGTGATATTCATAGCTTTTGCGTTCACCTTGGAAATTTCTGGTTTGAGGCTGAGTTCAGCTGCTATGACCTTAAGACCTTGATTGCCATTGAGCTTTATTTCTAAATCTGCATAGTGATCTCCTGTAGCCAACTAGCCATGGGAAATAGGTGAAAGTTCACTTTGCGTTTATAATCTCTTGAAAGAGTATAAATTAATGGATAATGCCTCATCAGCAAACACTGCATCTCCATTGGAGATTTTGGAATGTGCTTTTGTTTTTCTGATAAAGTAAGTATCTAGAACATTTCTATAGGATTCAAGCATAGTAATGGTACTGGCGCCCTGTGGACACTGCATAGGCTTGACTCTTTCTAGTGCGATGTGCTGATTGAAAAGTGCATACTAGGGTGTAGGTAATGTTCATCCTGTCATAAACTCATGCGGACTTTTTAGCTTGTGCTTGCTGTCAGAATGTGGTCCCTCTAAATATGAGCTGTTTTAGCAGAAGGTTATGGTCTGCTGACAGTGATCTTTGCTTTGTGCTGAGGAAGGATAGCATTCAAAACATTCATACAGCCCATAACCATATGTGTTCTATTTCTTATATGCACCATAAGCGCAATCATTAAGTACGGCAGTTGAAACCTTTGCTTTAGAGTTCTTATCCTATTGTCTATAGAGTCGCAACAACTATGCCCATCCATCAGATGTAGATCTGATTTTCAAAGTTGCCCCCCTTTCCAAATTTGTCACAAAACCATCTAGTTTCAAGGCTTACAACAGTAGATCAAGCACACCAAATGGCTTTACATTGCTAAATGTCGTGAAGTTATTGTCACTAGCTAGAATTTGCGCATGATGAAGTTACAGAGACTATTGAGGTCTCCGTAAGTTTGCTACATATCATTTCCCTGTTATTTTCCATGTCATGGAAGAAATCTCCATCTAATTGATCAACTTTCACGTTTTGTCTGGTACAACTAAATTTTTGTTGTGAGAACTCGATTAGTCAATTATAGGCACCATTCTTGTTACAAATGAACATAATCTTTCATATGTGGTGGTAAAAATCTTTACAATATAATCATTACTGCTGAATTGTTGTTTATATTGTTGGATTTCCTTAGTATCATCTTTCTTGAAATGGATTTTTTTTTGTTTCTTCTAGTTGTGTATACTGGCAGCAGAGACGACCAGTTATTATTTGATGATGATTACATACTTCATGTATCCAATGGGTATATTGCTTTATATCTGGCAGTCACTA]
[+] EMBL AU070309 [ GCCATCNNGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCNTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGNTGATGTCGATGTTGACCGCCTGTATGAGTACTTNTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCTGGGAGGAGCCAACAAGGAACTTTGATGGGAAAATGCTCAATGTGCAGAAGGCTttt ]
[+] EMBL CA999486 [ GCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTC ]
consensusID : consensus_10046#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 537 fasta sequence
[AACTTCTTTCCCCCTGTCTCCACCAACGCTCTCTGCTCTCTCCACTGGCGAGCACACTTAGAGAGGGACGAGGCAGGGAGGCCAGCGATGGAGGCGGGGAAGCCCGCCAGGGGGGGGGGTGAGATCGGGCCCGCGATGCCGCTGTTCCACCTGTCGCCTGCTCCGTTCCAGGAGATGTCTTCGTCAGAGCTCAAGCCCTGTGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGAGCGAAGGGCGACGCTTAGAGGGAGGACGGCGCCGGAGGGGACGAAGATGTGGGGGACATCATGAAGACGCCTCCGCTCCAACCACCGCCTACCCGGCTCCGCACCACCTGCCCGCTGCAGCTGCTGCAGCTCCGCCTGCCACACACCTCGCTCTACCGGTTGGCCGCTCCACCAGTATAGTGCAATCTATGTCCAACCATGGATTCTGTCGGAATATCATCGGTCTTACCACAACATTCTCCATTCCTGAAAATTCCTCATTGGGTAGATTCTATCAAAAGATCCTGCTGC]
[-] EMBL CA765795 [AACTTCTTTCCCCCTGTCTCCACCAACGCTCTCTGCTCTCTCCACTGGCGAGCACACTTAGAGAGGGACGAGGCAGGGAGGCCAGCGATGGAGGCGGGGAAGCCCGCCAGGGGGGGGGGTGAGATCGGGCCCGCGATGCCGCTGTTCCACCTGTCGCCTGCTCCGTTCCAGGAGATGTCTTCGTCAGAGCTCAAGCCCTGTGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGAGCGAAGGGCGACGCTTAGAGGGAGGACGGCGCCGGAGGGGACGAAGATGTGGGGGACATCATGAAGACGCCTCCGCTCCAACCACCGCCTACCCGGCTCCGCACCACCTGCCCGCTGCAGCTGCTGCAGCTCCGCCTGCCACACACCTCGCTCTACCGGTTGGCCGCTCCACCAGTATAGTGCAATCTATGTCCAACCATGGATTCTGTCGGAATATCATCGGTCTTACCACAACATTCTCCATTCCTGAAAATTCCTCATTGGGTAGATTCTATCAAAAGATCCTGCTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10046#0 ---CTCTCTCTCTCTCTCTCCCGTGTCCGCAACCGCAAATCCCCATT--TGGTCTCACCT 55
consensus_10046#1 AACTTCTTTCCCCCTGTCTCCACCAACGCTCTCTGCTC-TCTCCACTGGCGAGCACACTT 59
*** ** * ** ***** * * ** ** *** * * * *** *
consensus_10046#0 AAAACCC-------TAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGC 108
consensus_10046#1 AGAGAGGGACGAGGCAGGGAGGCCAGCGATGGAGGCGGGGAAGCCCGCCAGGGGGGGGGG 119
* * ** * ** * **** ** ***** ** **
consensus_10046#0 GGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCAC-CACCAGGAGACGC 167
consensus_10046#1 TGAGATCGGGCCCGCGATGCCGCTGTTCCAC-CTGTCGCCTGCTCCGTTCCAGGAGATGT 178
*** * * ** * ** * * * * * * ** * * ******** *
consensus_10046#0 CCTCCTCGGAGCTCAAGCCCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGG 227
consensus_10046#1 CTTCGTCAGAGCTCAAGCCCTGTGGGACCATCTACTTCCCCATCACCGACGACCCCCCGG 238
* ** ** ************ * *************************************
consensus_10046#0 AGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGG 287
consensus_10046#1 AGCCGAGAGCGAAGGGCGACGCTTAGAGGGAGGACGGCGCCGGAGGGGACGAAGATGTGG 298
******* ** ****** *** ** ************************* **** **
consensus_10046#0 AGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCA 347
consensus_10046#1 GGGACATCATGAAGACGCCTCCGCTCCAACCACCG--CCTACC--CGGCTCCGCACCACC 354
******* **** ** ** ** * * * * * *** * ** ** *
consensus_10046#0 CGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGC-GGAGGCCGAC 406
consensus_10046#1 TGCCCGCTGCAGCTGCTGCAGCTCCGCCTGCCAC-ACACCTCGCTCTACCGGTTGGCCGC 413
* **** * ** * * ** ** ** * * *** * * ** * * *
consensus_10046#0 CCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTC 466
consensus_10046#1 TCCACCAGTATAGTGCAATCTATGTCCAACCATGGATTCTGTCGGAATATCATCGGTCTT 473
** * ** * ** * * * ** ** * * * ** **
consensus_10046#0 CGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAA 526
consensus_10046#1 ACCACAACATTCTCC-ATTCCTGAAAATTCC----TCATTGGGTAGATTCTATCAAAAGA 528
* * * ****** * * * * ** * ** ** *** *
consensus_10046#0 TCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGC 586
consensus_10046#1 TCCTGCTGC--------------------------------------------------- 537
** ** *
consensus_10046#0 GCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCC 646
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAAC 706
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGC 766
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 AAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTC 826
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCT 886
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 AAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCTGGAGGAG 946
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 CCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACC 1006
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 AAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCA 1066
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGAT 1126
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATG 1186
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATG 1246
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 ATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCT 1306
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCT 1366
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 CAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGT 1426
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAG 1486
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGT 1546
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGT 1606
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCA 1666
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 AGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTT 1726
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGT 1786
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 CGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAG 1846
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAAC 1906
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTA 1966
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 CTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTA 2026
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 ATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGT 2086
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 CAAATGGTTTCTGGGCACTTGAAGGCTTTTTCTTTTTTGCAGTTGCAGTGGGATTTGGAA 2146
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GAATGTGATATTCATAGCTTTTGCGTTCACCTTGGAAATTTCTGGTTTGAGGCTGAGTTC 2206
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 AGCTGCTATGACCTTAAGACCTTGATTGCCATTGAGCTTTATTTCTAAATCTGCATAGTG 2266
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 ATCTCCTGTAGCCAACTAGCCATGGGAAATAGGTGAAAGTTCACTTTGCGTTTATAATCT 2326
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 CTTGAAAGAGTATAAATTAATGGATAATGCCTCATCAGCAAACACTGCATCTCCATTGGA 2386
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GATTTTGGAATGTGCTTTTGTTTTTCTGATAAAGTAAGTATCTAGAACATTTCTATAGGA 2446
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TTCAAGCATAGTAATGGTACTGGCGCCCTGTGGACACTGCATAGGCTTGACTCTTTCTAG 2506
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TGCGATGTGCTGATTGAAAAGTGCATACTAGGGTGTAGGTAATGTTCATCCTGTCATAAA 2566
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 CTCATGCGGACTTTTTAGCTTGTGCTTGCTGTCAGAATGTGGTCCCTCTAAATATGAGCT 2626
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GTTTTAGCAGAAGGTTATGGTCTGCTGACAGTGATCTTTGCTTTGTGCTGAGGAAGGATA 2686
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GCATTCAAAACATTCATACAGCCCATAACCATATGTGTTCTATTTCTTATATGCACCATA 2746
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 AGCGCAATCATTAAGTACGGCAGTTGAAACCTTTGCTTTAGAGTTCTTATCCTATTGTCT 2806
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 ATAGAGTCGCAACAACTATGCCCATCCATCAGATGTAGATCTGATTTTCAAAGTTGCCCC 2866
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 CCTTTCCAAATTTGTCACAAAACCATCTAGTTTCAAGGCTTACAACAGTAGATCAAGCAC 2926
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 ACCAAATGGCTTTACATTGCTAAATGTCGTGAAGTTATTGTCACTAGCTAGAATTTGCGC 2986
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 ATGATGAAGTTACAGAGACTATTGAGGTCTCCGTAAGTTTGCTACATATCATTTCCCTGT 3046
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TATTTTCCATGTCATGGAAGAAATCTCCATCTAATTGATCAACTTTCACGTTTTGTCTGG 3106
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TACAACTAAATTTTTGTTGTGAGAACTCGATTAGTCAATTATAGGCACCATTCTTGTTAC 3166
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 AAATGAACATAATCTTTCATATGTGGTGGTAAAAATCTTTACAATATAATCATTACTGCT 3226
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 GAATTGTTGTTTATATTGTTGGATTTCCTTAGTATCATCTTTCTTGAAATGGATTTTTTT 3286
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TTGTTTCTTCTAGTTGTGTATACTGGCAGCAGAGACGACCAGTTATTATTTGATGATGAT 3346
consensus_10046#1 ------------------------------------------------------------
consensus_10046#0 TACATACTTCATGTATCCAATGGGTATATTGCTTTATATCTGGCAGTCACTA 3398
consensus_10046#1 ----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||