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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10058#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2540 fasta sequence
[GCTACTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGGCAAAGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATTGCATTTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAGCTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGGCTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTGAACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCACACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCAAGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATTCAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCGTTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTTTTTCAGGGTATGGAATTCTAAGAATCTTATGGAGAATTTTATCCATGTGGCTCTCTCAAACAAAAGAATGAACTTTTCTGCATAGCCATGTGTTCACATGTAATAGGCAGCCACACAGGAAATCTAACAGAAGGTCAAACTTTCTTTAATACTCTCTCCAAATTCATATAGAAATTTATCCAATAGCTCAATTGAGCAAATCATATTCTGCAATTCCTTATGATTCAACTTGGCGAGCCACTTTTGTTTTGTATTTTTTTTTATATGGCAGATTCCACCAGAGTGTAAATCTGTTGTTCCAGAATTTCGCAATTTGTCCGGTACCATGCCCTTCTAGAATATCTGACGAGACCAAAATATGGAGGCATAACCACTTGCAATGAACTGAACTGAAACCATATGTAAAGTATGCTGCAGAGATCGATGAAGGATGATAGATAGATATATTCCATTTCTTGCTTTGAAGCAACAGAACAAAAAAACCCACACCCACACATCACTCCTCCCATTTCGATCAGAAATAGGTACTGCAAAATCTTCCTGCTTGCTTCAGAATCCAGAACTCTCCATTAATTTCTCGAAACAACTGCCTCTAGTACAGTACAGTGATAGAAAAACATAACAAAATGATAAAGAAAAAGAGAGCAGGATTCAGTCAATTGACAGCCACAGATAAAAGCAAGAAACATTTTTCTTTCACTCCTGCCGATTTTGTTTCTGAATTTCTGATGACAGTTAATTTTTGTGGTTAAGGAGGAGTCCAGAACATCAGATGCCACTAGAAAGAAGATCATTCAAGGCGATGAGTGGTAGAAAATCATCCACACAACTAAGGCCAGGGTAAAGCCAGCCGGCCTCTACTCTGAAGAGTCAAAAACCAAAAAAGATTCAGAGAAAGTTTCAGTGAGAGAGAGATGACAATTCAGAATTCACTGTGATGATGGAGGTGGTGGTGTTGGCGATGGCGACAAGCCTCCTCTCCACACCGCAAATAATCTCCACCATTATCGCCATCGCTAGCTAGATGCCGGTGGAGTTCGTGCTTGCAATTCGGTTTGTCACCACGCTCTTGCTGGGACGGACAGTGCAGGTCTCTTTCATGGCCATGGAAAATTTTTCTCCCCTTCCCTTTAATTCCTTTTCCTTTGGGAAATTGCAACCTGAATATATGATAGCTAGCGAGTTCAATCGATCGATCGATAGACGATGACGAGATGTGTGTTTTCACCAGAGGTTGTTTTGCTCCTGAAATATTCTTGCCTGTTCTTTTTTTTTTCTATGGTAGAGATTGTGACAAAAAATCAACAGTTCATCATCCATGGCATGTGAAATTTTTCAGTGAATATATATATAC]
[+] EMBL AK119308 [GCTACTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGGCAAAGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATTGCATTTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAGCTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGGCTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTGAACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCACACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCAAGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATTCAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCGTTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTTTTTCAGGGTATGGAATTCTAAGAATCTTATGGAGAATTTTATCCATGTGGCTCTCTCAAACAAAAGAATGAACTTTTCTGCATAGCCATGTGTTCACATGTAATAGGCAGCCACACAGGAAATCTAACAGAAGGTCAAACTTTCTTTAATACTCTCTCCAAATTCATATAGAAATTTATCCAATAGCTCAATTGAGCAAATCATATTCTGCAATTCCTTATGATTCAACTTGGCGAGCCACTTTTGTTTTGTATTTTTTTTTATATGGCAGATTCCACCAGAGTGTAAATCTGTTGTTCCAGAATTTCGCAATTTGTCCGGTACCATGCCCTTCTAGAATATCTGACGAGACCAAAATATGGAGGCATAACCACTTGCAATGAACTGAACTGAAACCATATGTAAAGTATGCTGCAGAGATCGATGAAGGATGATAGATAGATATATTCCATTTCTTGCTTTGAAGCAACAGAACAAAAAAACCCACACCCACACATCACTCCTCCCATTTCGATCAGAAATAGGTACTGCAAAATCTTCCTGCTTGCTTCAGAATCCAGAACTCTCCATTAATTTCTCGAAACAACTGCCTCTAGTACAGTACAGTGATAGAAAAACATAACAAAATGATAAAGAAAAAGAGAGCAGGATTCAGTCAATTGACAGCCACAGATAAAAGCAAGAAACATTTTTCTTTCACTCCTGCCGATTTTGTTTCTGAATTTCTGATGACAGTTAATTTTTGTGGTTAAGGAGGAGTCCAGAACATCAGATGCCACTAGAAAGAAGATCATTCAAGGCGATGAGTGGTAGAAAATCATCCACACAACTAAGGCCAGGGTAAAGCCAGCCGGCCTCTACTCTGAAGAGTCAAAAACCAAAAAAGATTCAGAGAAAGTTTCAGTGAGAGAGAGATGACAATTCAGAATTCACTGTGATGATGGAGGTGGTGGTGTTGGCGATGGCGACAAGCCTCCTCTCCACACCGCAAATAATCTCCACCATTATCGCCATCGCTAGCTAGATGCCGGTGGAGTTCGTGCTTGCAATTCGGTTTGTCACCACGCTCTTGCTGGGACGGACAGTGCAGGTCTCTTTCATGGCCATGGAAAATTTTTCTCCCCTTCCCTTTAATTCCTTTTCCTTTGGGAAATTGCAACCTGAATATATGATAGCTAGCGAGTTCAATCGATCGATCGATAGACGATGACGAGATGTGTGTTTTCACCAGAGGTTGTTTTGCTCCTGAAATATTCTTGCCTGTTCTTTTTTTTTTCTATGGTAGAGATTGTGACAAAAAATCAACAGTTCATCATCCATGGCATGTGAAATTTTTCAGTGAATATATATATAC]
consensusID : consensus_10058#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1280 fasta sequence
[CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCNGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAA-TCT-CATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGG-GCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATTGCATATTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAGCTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGGCTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTGAACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCACACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCAAGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATTCAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCGTTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTTTTTCAGGGTATGGAATTCTAAGAATCTTATGGA]
[+] EMBL AK108556 [CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCT CATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGATCGGG GCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATTGCATATTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAGCTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGGCTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTGAACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCACACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCAAGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATTCAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCGTTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTTTTTCAGGGTATGGAATTCTAAGAATCTTATGGA]
[+] EMBL AU064207 [ AAAATATCTCGCNGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAA TCT CATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGG GAAGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACNTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGNAGCAACCATGTCGGT ]
[+] EMBL C73534 [ AAAATATCTCGCNGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAA TCTNCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGG GGNGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTC ]
[+] EMBL C73292 [ CTCGCNGTCGTTGCGCGCGGTA NTAGCTAGCTAGCTGCGCCATCGACGACGAA GCT CATCCATGGAGGCGGCGGCTGCCCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGCNCGGCGGCTGCGGGCGCTGCCGCCGCAGGTAAG ]
consensusID : consensus_10058#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence
[CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCAGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGCGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATT]
[+] EMBL AK120934 [CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCAGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGCGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATT]
consensusID : consensus_10058#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 694 fasta sequence
[CTCCAACAATTGACAAAAACCAGGACTTGATAGTCACTGTATGGTCAGTGAGCTCAGACTCAAACATGACAGTCTAGATGGTTACTGTATTTTACACCAGCTGCAAAAATATGCGATCAATACGCATCTAATTAACAGCATAACCTCACATCTGACAAATGCCACAAAATTCAGGACTCATTGATTTTTGCCTCTCTGTTTTTTCTTTAACTTTTGTTGATGGATGTTCTTGCGCCTGTGTGCAAAATGCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTTGCCGGCGACGGCCAACCTGGAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAAGGGGGGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAAAAAA]
[-] EMBL CA760538 [CTCCAACAATTGACAAAAACCAGGACTTGATAGTCACTGTATGGTCAGTGAGCTCAGACTCAAACATGACAGTCTAGATGGTTACTGTATTTTACACCAGCTGCAAAAATATGCGATCAATACGCATCTAATTAACAGCATAACCTCACATCTGACAAATGCCACAAAATTCAGGACTCATTGATTTTTGCCTCTCTGTTTTTTCTTTAACTTTTGTTGATGGATGTTCTTGCGCCTGTGTGCAAAATGCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTTGCCGGCGACGGCCAACCTGGAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAAGGGGGGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10058#0 GCTACTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCT 60
consensus_10058#1 ----CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCNGTCGTTGCGCGCGGTAGCT 56
consensus_10058#2 ----CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCT 56
consensus_10058#3 ----CTCCAA-CAATTGACAAAAACCAGGA----CTTGATAGTCACTGTATG-GTCAGTG 50
***** ** * * ** * * * *** ** * * **
consensus_10058#0 AGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAG-GCGGCGGCTGCGCTG 119
consensus_10058#1 AGCTAGCTAGCTGCGCCATCGACGACGAA-TCTCATCCATGGAG-GCGGCGGCTGCGCTG 114
consensus_10058#2 AGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAG-GCGGCGGCTGCGCTG 115
consensus_10058#3 AGCT--CAGACTCAAACATGACAGTCTAGATGGTTACTGTATTTTACACCAGCTGCAAAA 108
**** * ** *** * * * * * * * * *****
consensus_10058#0 ACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGG-CGCCGC 178
consensus_10058#1 ACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGG-CGCCGC 173
consensus_10058#2 ACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGC--------- 166
consensus_10058#3 ATAT--GCGATCAATACGCA-TCTAATTAACAGCATAACCTCACATCTGACAAATGCCAC 165
* *** * * ** * * * *** * ** *
consensus_10058#0 ACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCT 238
consensus_10058#1 ACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCT 233
consensus_10058#2 ------------------------AGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCT 202
consensus_10058#3 AAAATTCAGGACT-------CATTGATTTTTGCCTCTCTGTTTTTTCTTTAACTTTTGTT 218
*** * * * * * * *
consensus_10058#0 GCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTC 298
consensus_10058#1 GCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTC 293
consensus_10058#2 GCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTC 262
consensus_10058#3 GATGGATGTTCTTGCGCCTGTGTGCAAAATGCAGTGCTCTGAT--GCTGTTCTTCTACTT 276
* ** * * *** *** ** * * * ** * ** **** ** * **
consensus_10058#0 GCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAG------------------ 340
consensus_10058#1 GCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTT 353
consensus_10058#2 GCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTT 322
consensus_10058#3 CGTGTCCAAC-TGGGTGGTGCCT--------GAGTTAATCA------------------- 308
* ** ** ** * * ** *****
consensus_10058#0 -------------------------------------GCAAAG----------AGCCCAA 353
consensus_10058#1 CTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAA 413
consensus_10058#2 CTACTTCGCGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAA 382
consensus_10058#3 --------------------------------------TGAAGGATTTGCAGGAGCCCAA 330
*** *******
consensus_10058#0 AAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGG 413
consensus_10058#1 AAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGG 473
consensus_10058#2 AAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGG 442
consensus_10058#3 AAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTTGCCGG 390
****************************************************** *****
consensus_10058#0 CGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAA 473
consensus_10058#1 CGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAA 533
consensus_10058#2 CGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAA 502
consensus_10058#3 CGACGGCCAACCTGGAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAA 450
************** *********************************************
consensus_10058#0 GGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTT 533
consensus_10058#1 GGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTT 593
consensus_10058#2 GGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTT 562
consensus_10058#3 GGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTT 510
************************************************************
consensus_10058#0 ATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCT 593
consensus_10058#1 ATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCT 653
consensus_10058#2 ATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCT 622
consensus_10058#3 ATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCT 570
************************************************************
consensus_10058#0 AATTATAATCAAAGAGAAGATTAATTCTCCATCAGAA------GGGGGGGGCTTACATAT 647
consensus_10058#1 AATTATAATCAAAGAGAAGATTAATTCTCCATCAGAA------GGGGGGGGCTTACATAT 707
consensus_10058#2 AATTATAATCAAAGAGAAGATTAATTCTCCATCAGAA------GGGGGGGGCTTACATAT 676
consensus_10058#3 AATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAAGGGGGGGGGGGGGCTTACATAT 630
************************************* *****************
consensus_10058#0 AGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAT 707
consensus_10058#1 AGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAT 767
consensus_10058#2 AGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAT 736
consensus_10058#3 AGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAA 690
***********************************************************
consensus_10058#0 TGCAT-TTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAG 766
consensus_10058#1 TGCATATTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAG 827
consensus_10058#2 T----------------------------------------------------------- 737
consensus_10058#3 AAAA-------------------------------------------------------- 694
consensus_10058#0 CTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGG 826
consensus_10058#1 CTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGG 887
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 CTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTG 886
consensus_10058#1 CTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTG 947
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 AACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCA 946
consensus_10058#1 AACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCA 1007
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 CACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCA 1006
consensus_10058#1 CACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCA 1067
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 AGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATT 1066
consensus_10058#1 AGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATT 1127
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 CAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCG 1126
consensus_10058#1 CAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCG 1187
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 TTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTT 1186
consensus_10058#1 TTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTT 1247
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 TTTCAGGGTATGGAATTCTAAGAATCTTATGGAGAATTTTATCCATGTGGCTCTCTCAAA 1246
consensus_10058#1 TTTCAGGGTATGGAATTCTAAGAATCTTATGGA--------------------------- 1280
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 CAAAAGAATGAACTTTTCTGCATAGCCATGTGTTCACATGTAATAGGCAGCCACACAGGA 1306
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 AATCTAACAGAAGGTCAAACTTTCTTTAATACTCTCTCCAAATTCATATAGAAATTTATC 1366
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 CAATAGCTCAATTGAGCAAATCATATTCTGCAATTCCTTATGATTCAACTTGGCGAGCCA 1426
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 CTTTTGTTTTGTATTTTTTTTTATATGGCAGATTCCACCAGAGTGTAAATCTGTTGTTCC 1486
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 AGAATTTCGCAATTTGTCCGGTACCATGCCCTTCTAGAATATCTGACGAGACCAAAATAT 1546
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 GGAGGCATAACCACTTGCAATGAACTGAACTGAAACCATATGTAAAGTATGCTGCAGAGA 1606
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 TCGATGAAGGATGATAGATAGATATATTCCATTTCTTGCTTTGAAGCAACAGAACAAAAA 1666
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 AACCCACACCCACACATCACTCCTCCCATTTCGATCAGAAATAGGTACTGCAAAATCTTC 1726
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 CTGCTTGCTTCAGAATCCAGAACTCTCCATTAATTTCTCGAAACAACTGCCTCTAGTACA 1786
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 GTACAGTGATAGAAAAACATAACAAAATGATAAAGAAAAAGAGAGCAGGATTCAGTCAAT 1846
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 TGACAGCCACAGATAAAAGCAAGAAACATTTTTCTTTCACTCCTGCCGATTTTGTTTCTG 1906
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 AATTTCTGATGACAGTTAATTTTTGTGGTTAAGGAGGAGTCCAGAACATCAGATGCCACT 1966
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 AGAAAGAAGATCATTCAAGGCGATGAGTGGTAGAAAATCATCCACACAACTAAGGCCAGG 2026
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 GTAAAGCCAGCCGGCCTCTACTCTGAAGAGTCAAAAACCAAAAAAGATTCAGAGAAAGTT 2086
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 TCAGTGAGAGAGAGATGACAATTCAGAATTCACTGTGATGATGGAGGTGGTGGTGTTGGC 2146
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 GATGGCGACAAGCCTCCTCTCCACACCGCAAATAATCTCCACCATTATCGCCATCGCTAG 2206
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 CTAGATGCCGGTGGAGTTCGTGCTTGCAATTCGGTTTGTCACCACGCTCTTGCTGGGACG 2266
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 GACAGTGCAGGTCTCTTTCATGGCCATGGAAAATTTTTCTCCCCTTCCCTTTAATTCCTT 2326
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 TTCCTTTGGGAAATTGCAACCTGAATATATGATAGCTAGCGAGTTCAATCGATCGATCGA 2386
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 TAGACGATGACGAGATGTGTGTTTTCACCAGAGGTTGTTTTGCTCCTGAAATATTCTTGC 2446
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 CTGTTCTTTTTTTTTTCTATGGTAGAGATTGTGACAAAAAATCAACAGTTCATCATCCAT 2506
consensus_10058#1 ------------------------------------------------------------
consensus_10058#2 ------------------------------------------------------------
consensus_10058#3 ------------------------------------------------------------
consensus_10058#0 GGCATGTGAAATTTTTCAGTGAATATATATATAC 2540
consensus_10058#1 ----------------------------------
consensus_10058#2 ----------------------------------
consensus_10058#3 ----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||