cluster # 10063

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10063 cluster # 10063 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10063#0 length = 643 sequences # 7
consensusID : consensus_10063#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 643
fasta sequence
                              [CACCGACAGTTCTTCGGTCAACGAGCTGGCAAAGCTGGTTACGCCGCCGGTGCACAAGCTTGGGCTGGAGGTGCAGACCACAGTCGGTGCCCA-ACCCGCGGGTGGAAGCGGAGGAACACTACTACAACGCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTCCTCGACTCGCTGCTCAACTTCGCCGTCCAGTACA-AGGACAGGGTCGACA-CGGCGCAGATCATGCCCA-GCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTCTAAGAGGAGGCTGGTTTTGCCATGGCGGGGTATAATGTCAACCGTGACATTGACATTATAAATTTGGTGTGTAGTAATG-CAATAATTATGTGCGTTTAGTATAATGCACGTTGTAGTGGGTGTGGTTACGGTGTTAGATTTCTTTTTTGTTCTTCCTCACGAATAGATGCTGCAATCTGATCGAAGGGGATTCCTTCTGTATTTCTGTTGTAAACTTTTATCCAGCTCTTGATCAGCAAATGGGTATCCAGGATGCAGGGGGGTATTTGAGCC--TTTTTTTTTTTTTTGAGTGTTTCCGAACTGAAGATGGTGTAATAATACCATACATACCACTAATTTCT]

[+] EMBL BI811726             [CACCGACAGTTCTTCGGTCAACGAGCTGGCAAAGCTGGTTACGCCGCCGGTGCACAAGCTTGGGCTGGAGGTGCAGACCACAGTCGGTGCCCACACCCGCGGGTGGAA CGGAGGAACACTACTACAACGCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTCCTCGACTCGCTGCTCAACTTC CCGTCCAGTACACAGGACAGGGTCGACACCGGCGCAGATCATGCCCACGCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTCTAAGAGGAGGCTGGTTTTGCCCTGGCGGGGTATAATGTCAACCGTGACCTTGACATTATAAATTTGGTGTGTAGTAATGCCAATAATTATGTGCGTTTAGTATAATGCACGTTGTAGTGGGTGTGGTTACGGTGTTAGATTTCTTTTTTGTTCTTCCTCACGAATAGATGCTGCCATCTGATCGAAGGGGATTCCTTCTGTATTTCTGTTGTAAACTTTTATCCCGCTCTTGATCAGCCAAaaaaaaaa                                                                                               ]
[+] EMBL AK061359             [                                                                                 AGTCGGTGCCCA ACCCGCGGGTGGAAGCGGAGGAACACTACTACAACGCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTCCTCGACTCGCTGCTCAACTTCGCCGTCCAGTACA AGGACAGGGTCGACA CGGCGCAGATCATGCCCA GCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTCTAAGAGGAGGCTGGTTTTGCCATGGCGGGGTATAATGTCAACCGTGACATTGACATTATAAATTTGGTGTGTAGTAATG CAATAATTATGTGCGTTTAGTATAATGCACGTTGTAGTGGGTGTGGTTACGGTGTTAGATTTCTTTTTTGTTCTTCCTCACGAATAGATGCTGCAATCTGATCGAAGGGGATTCCTTCTGTATTTCTGTTGTAAACTTTTATCCAGCTCTTGATCAGCAAATGGGTATCCAGGATGCAGGGGGGTATTTGAGCC  TTTTTTTTTTTTTTGAGTGTTTCCGAACTGAAGATGGTGTAATAATACCATACATACCACTAATTTC ]
[+] EMBL AK104679             [                                                                                 AGTCGGTGCCCA ACCCGCGGGTGGAAGCGGAGGAACACTACTACAACGCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTCCTCGACTCGCTGCTCAACTTCGCCGTCCAGTACA AGGACAGGGTCGACA CGGCGCAGATCATGCCCA GCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTCTAAGAGGAGGCTGGTTTTGCCATGGCGGGGTATAATGTCAACCGTGACATTGACATTATAAATTTGGTGTGTAGTAATG CAATAATTATGTGCGTTTAGTATAATGCACGTTGTAGTGGGTGTGGTTACGGTGTTAGATTTCTTTTTTGTTCTTCCTCACGAATAGATGCTGCAATCTGATCGAAGGGGATTCCTTCTGTATTTCTGTTGTAAACTTTTATCCAGCTCTTGATCAGCAAATGGGTATCCAGGATGCAGGGGGGTATTTGAGCC  TTTTTTTTTTTTTTGAGTGTTTCCGAACTGAAGATGGTGTAATAATACCATACATACCACTAATTTC ]
[+] EMBL CA999567             [                                                                                 AGTCGGTGCCCA ACCCGCGGGTGGAAGCGGAGGAACACTACTACAACGCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTCCTCGACTCGCTGCTCAACTTCGCCGTCCAGTACA AGGACAGGGTCGACA CGGCGCAGATCATGCCCA GCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTCTAAGAGGAGGCTGGTTTTGCCATGGCGGGGTATAATGTCAACCGTGACATTGACATTATAAATTTGGTGTGTAGTAATG CAATAATTATGTGCGTTTAGTATA                                                                                                                                                                                                                                                ]
[-] EMBL CB645459             [                                                                                  GTCGGTGCCCA ACCCGCGGGTGGAAGCGGAGGAACACTATTACAACGCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTCCTCGACTCGCTGCTCAACTTCGCCGTCCAGTACA AGGACAGGGTCGACA CGGCGCAGATCATGCCCA GCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTTTAAGAGGAGGCTGGTTTTGCCATGGCGGGGTATAATGTCAACCGTGACATTGACATTATAAATTTGGTGTGTAGTAATG CAATAATTATGTGCGTTTAGTATAATGCACGTTGTAGTGGGTGTGGTTACGGTGTTAGATTTCTTTTTTGTTCTTCCTCACGAATAGATGCTGCAATTTGATCGAAGGGGATTCCTTCTGTATTTCTGTTGTAAACTTTTATCCAGCTCTTGATCAGCAAATGGGTATCCAGGATGCAGGGGGGTATTTGAGCCTTTTTTTTTTTTTTTTGAGTGTTTCCGATCTGAAGGGGGTGTAATAATACCATACATA            ]
[-] EMBL CB625976             [                                                                                  GTCGGTGCCCA ACCCGCGGGTGGAAGCGGAGGAACACTATTACAACGCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTCCTCGACTCGCTGCTCAACTTCGCCGTCCAGTACA AGGACAGGGTCGACA CGGCGCAGATCATGCCCA GCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTCTAAGAGGAGGCTGGTTTTGCCATGGCGGGGTATAATGTCAACCGTGACATTGACATTATAAATTTGGTGTGTAGTAATG CAATAATTATGTGCGTTTAGTATAATGCACGTTGTAGTGGGTGTGGTTACGGTGTTAGATTTCTTTTTTGTTCTTCCTCACGAATAGATGCTGCAATCTGATCGAAGGGGATTCATTCTGTATTTCTGTTGTAAACTTTTATCCAGCTCTTGATCAGCAAATGGGTATCCAGGATGCAG                                                                                     ]
[-] EMBL CB682802             [                                                                                  GTCGGTGCCCA ACCCGCGGGTGGAAGCGGAGGAACACTACTACAACGCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTCCTCGACTCGCTGCTCAACTTCGCCGTCCAGTACA AGGACAGGGTCGACA CGGCGCAGATCATGCCCA GCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTCTAAGAGGAGGCTGGTTTTGCCATGGCGGGGTATAATGTCAACCGTGACATTGACATTATAAATTTGGTGTGTAGTAATG CAATAATTATGTGCGTTTAGTATAATGCACGTTGTAGTGGGTGTGGTTACGGTGTTAGATTTCTTTTTTGTTCTTCCTCACGAATAGATGCTGCAATCTGATCGAAGGGGATTCCTTCTGTATTTCTGTTGTAAACTTTTATCCAGCTCTTGATCAGCAAATGGGTATCCAGGATGCAGGGGGGTATTTGAGCC   TTTTTTTTTTTTTGAGTGTTTCCGAACTGAAGATGGTGTAATAATACCATACATACCACTAATTTCT]




>consensus_10063#0
CACCGACAGTTCTTCGGTCAACGAGCTGGCAAAGCTGGTTACGCCGCCGGTGCACAAGCT
TGGGCTGGAGGTGCAGACCACAGTCGGTGCCCAACCCGCGGGTGGAAGCGGAGGAACACT
ACTACAACGCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGG
ACTCGCTCCTCGACTCGCTGCTCAACTTCGCCGTCCAGTACAAGGACAGGGTCGACACGG
CGCAGATCATGCCCAGCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCG
TCTAAGAGGAGGCTGGTTTTGCCATGGCGGGGTATAATGTCAACCGTGACATTGACATTA
TAAATTTGGTGTGTAGTAATGCAATAATTATGTGCGTTTAGTATAATGCACGTTGTAGTG
GGTGTGGTTACGGTGTTAGATTTCTTTTTTGTTCTTCCTCACGAATAGATGCTGCAATCT
GATCGAAGGGGATTCCTTCTGTATTTCTGTTGTAAACTTTTATCCAGCTCTTGATCAGCA
AATGGGTATCCAGGATGCAGGGGGGTATTTGAGCCTTTTTTTTTTTTTTGAGTGTTTCCG
AACTGAAGATGGTGTAATAATACCATACATACCACTAATTTCT
clustalw multiple alignements is not computed in this case