These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10069#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1890 fasta sequence [TCTTCCCCTTCCTCCTCCTCCTCCTCCTCCTCCACGCTTCCGCAAATTTCCGATCTCCTCCTCCTCCTCATCCAGCTCGCTCGCTCGCTCGCGGCGGAGAATCCAGCCCGAGCAGGCTGGCTTGTGCTTGAGCTAGAATCTCCGGCCCCGTCGCAGGCTCCGTATCAACCAAGATATAAGCTCCACACGGTTTATTGAACATTTGTGCCAGACTATTGGGGTGAACATTCAGTCAAGTCTTCAAAGTGTTTATTCCAAAACAAATGCAATGA-GTTGTCATACAAGGGGCTTGTTGAAGGAATACAACATATATTTATAGGCGATCACCTATATTTTTCTGACTCATGGGCGACTGGGTTATAGGAGCACTGATCAACATTGTGGGGAGTGTTGCCATAAACTTTGGTACCAACCTTCTGAAATTGGGCCATGATCAGAGAGAGAAGCTTTCGACAACCAACAACAATCAAGGCAATGACAAATTTGTTCAGAAGTCAGTTATGCATTTTCAAACTTGGAGAATAGGCATACTGTTCTTTGCTGCGGGAAACTGCCTCAACTTCATGTCCTTCGCATATGCCGCACAGTCACTTCTTGCAGCTCTTGGATCGATTCAATTTGTGTCCAATATTGCATTTGCTTACTTTGTGTTGAACAAGACCATTTCAGTGAAAGTCATGGTAGCAACAACATTTATTGTATTTGGCAATATCTTCCTAGTTTCCTTTGGTAATCATCAATCTCCAGTTTACACCCCGGAGCAGCTAGTTGCGAAATACAGCAATTTAGTGTTTGTTCTCTATTGCATGTCACTGGTCTTTGTGGTTGCATTCAATCAGTATCTCTACAGGAGTGGAGAAACTATCATTTCGGATAGTGCGAAACATACTGGCTCACATTGGCGGACATTGTTGCCATTTTCTTATGCTATTGTATCTGGTGCTATTGGATCTTGTTCTGTCTTATTTGCAAAATCATTGTCAAACATGCTGAGGCTAACAATGAGCAGCAGATACCAGTTCCATAGCTGGTTCACATACTCAATGCTTCTGTTGTTCCTCTTTACAGCTGGCTTTTGGATGGCGAGATTGAATGAAGGCCTGTCTCTTTTTGATGCAATACTGATTGTTCCAATGTTTCAGATTGCTTGGACCTTTTTTTCTATTTGCACAGGATTTGTGTACTTTCAAGAATATCAAGTATTTGATACCCTGAGGATAGTGATGTTTGTATTGGGCATGACATCTGTCTTTATAGGCATCTCCTTACTGGCACCCGACGACAGTAAAGATGGTTCTAGTGCCACCCAGGAACCTGCAATTGATGCAAACAGGCCTGGAAAGATGCAGACGGAGGAGACAGAAGTTGATGGTACTAACTCCTTCACAAGTTCAGTAAAAGTAAAAGCAAAACGCATACTGTCCAAGGCAAAGTCGGCTTGCTCCATGTCACTTGGCCTTGGGGAGGAGACCATCAGCGCTTCATCGGTGCTTGCGATGCCGATGGTCTCCTCACGAACAA-CAGGGTTCAGAGGAATCGCAACCGACCGATCAAAGTACATTCCTTTGCGGTCGACCGATTGGGACAATCTATAGTTGACGATGATTTGAATTACAGGTATACAAGCCAAATGTCTTACTTGGATGTTGCCAAGCGGATGCCAGTAAATTTTTGTTGCTTCCGGAAGGCAACTGTTTATTCCACCCCTATAGCTTAGCTGTAACATGAGTGTATAGTTCGATAAAACTTCCCTTGAAACACTGTCCATACCCA-GGTTGTTGTATTTCTTCGAAA-CAGGTGCCTACAATA-CTTGTATAAACACGCCACACATGTTAGAACAAACTTCAATGATTCAATTCACTCTTCCCATTGGTNTTCCAAAAAAAAAAA] [+] EMBL AK103390 [TCTTCCCCTTCCTCCTCCTCCTCCTCCTCCTCCACGCTTCCGCAAATTTCCGATCTCCTCCTCCTCCTCATCCAGCTCGCTCGCTCGCTCGCGGCGGAGAATCCAGCCCGAGCAGGCTGGCTTGTGCTTGAGCTAGAATCTCCGGCCCCGTCGCAGGCTCCGTATCAACCAAGATATAAGCTCCACACGGTTTATTGAACATTTGTGCCAGACTATTGGGGTGAACATTCAGTCAAGTCTTCAAAGTGTTTATTCCAAAACAAGTGCAATGA GTTGTCATACAAGGGGCTTGTTGAAGGAATACAACATATATTTATAGGCGATCACCTATATTTTTCTGACTCATGGGCGACTGGGTTATAGGAGCACTGATCAACATTGTGGGGAGTGTTGCCATAAACTTTGGTACCAACCTTCTGAAATTGGGCCATGATCAGAGAGAGAAGCTTTCGACAACCAACAACAATCAAGGCAATGACAAATTTGTTCAGAAGTCAGTTATGCATTTTCAAACTTGGAGAATAGGCATACTGTTCTTTGCTGCGGGAAACTGCCTCAACTTCATGTCCTTCGCATATGCCGCACAGTCACTTCTTGCAGCTCTTGGATCGATTCAATTTGTGTCCAATATTGCATTTGCTTACTTTGTGTTGAACAAGACCATTTCAGTGAAAGTCATGGTAGCAACAACATTTATTGTATTTGGCAATATCTTCCTAGTTTCCTTTGGTAATCATCAATCTCCAGTTTACACCCCGGAGCAGCTAGTTGCGAAATACAGCAATTTAGTGTTTGTTCTCTATTGCATGTCACTGGTCTTTGTGGTTGCATTCAATCAGTATCTCTACAGGAGTGGAGAAACTATCATTTCGGATAGTGCGAAACATACTGGCTCACATTGGCGGACATTGTTGCCATTTTCTTATGCTATTGTATCTGGTGCTATTGGATCTTGTTCTGTCTTATTTGCAAAATCATTGTCAAACATGCTGAGGCTAACAATGAGCAGCAGATACCAGTTCCATAGCTGGTTCACATACTCAATGCTTCTGTTGTTCCTCTTTACAGCTGGCTTTTGGATGGCGAGATTGAATGAAGGCCTGTCTCTTTTTGATGCAATACTGATTGTTCCAATGTTTCAGATTGCTTGGACCTTTTTTTCTATTTGCACAGGATTTGTGTACTTTCAAGAATATCAAGTATTTGATACCCTGAGGATAGTGATGTTTGTATTGGGCATGACATCTGTCTTTATAGGCATCTCCTTACTGGCACCCGACGACAGTAAAGATGGTTCTAGTGCCACCCAGGAACCTGCAATTGATGCAAACAGGCCTGGAAAGATGCAGACGGAGGAGACAGAAGTTGATGGTACTAACTCCTTCACAAGTTCAGTAAAAGTAAAAGCAAAACGCATACTGTCCAAGGCAAAGTCGGCTTGCTCCATGTCACTTGGCCTTGGGGAGGAGACCATCAGCGCTTCATCGGTGCTTGCGATGCCGATGGTCTCCTCACGAACAA CAGGGTTCAGAGGAATCGCAACCGACCGATCAAAGTACATTCCTTTGCGGTCGACCGATTGGGACAATCTATAGTTGACGATGATTTGAATTACAGGTATACAAGCCAAATGTCTTACTTGGATGTTGCCAAGCGGATGCCAGTAAATTTTTGTTGCTTCCGGAAGGCAACTGTTTATTCCACCCCTATAGCTTAGCTGTAACATGAGTGTATAGTTCGATAAAACTTCCCTTGAAACACTGTCCATACCCA GGTTGTTGTATTTCTTCGAAA CAGGTGCCTACAATA CTTGTATAAACACGCCACACATGTTAGAACAAACTTCAATGATTCAATTCACTCTTCCCATTGG ] [+] EMBL AU056673 [ CCTTCCTCCTCCTCCTCCTCCTCCTCCACGCTTCCGCAAATTTCCGATCTCCTCCTCCTCCTCATCCAGCTCGCTCGCTCGCTCGCGGCGGAGAATCCAGCCCGAGCAGGCTGGCTTGTGCTTGAGCTAGAATCTCCGGCCCCGTCGCAGGCTCCGTATCAACCAAGATATAAGCTCCACACGGTTTATTGAACATTTGTGCCAGACTATTGGGGTGAACATTCAGTCAAGTCTTCAAAGTGTTTATTCCAAAACAAATGCAATGA GTTGTCATACAAGGGGCTTGTTGAAGGAATACAACATATATTTATAGGCGATCACCTATATTTTTCTGACTCATGGGCGACTGGGTTATAGGAGCACTGATCAACATTGTGGGGAGTGTTGCCATAAACTTTGGTACCAACCTTCTGAAATTGGGCCATGATCAGAGAGAGAAGCTTTCGACAACCAACAACAATCAAGGCAATGACAAATTTGTTCCGAAGTCAGTTATGCATTTTCAAACTTGGAGAATAGGCATACTGTTCTTTGCTGCGGGAAACTGCCTCAACTTCATGTCCTTCGCATATGCCGCACAGTCACTTCTTGCAGCTCTTGGATCGATTCAATTTGTGTCCAATATTGCATTTGCTTACTTTGTGTTGAACAAGACCATTTCAGTGAAAGTCATGGTAGCAACA ] [+] EMBL OSS10383A [ TCGCTCGCTCGCGGCGGAGAATCCAGCCCGAGCAGGCTGGCTTGTGCTTGAGCTAGAATCTCCGGCCCCGTCGCAGGCTCCGTATCAACCAAGATATAAGCTCCACACGGTTTATTGAACATTTGTGCCAGACTATTGGGGTGAACATTCAGTCAAGTCTTCAAAGTGTTTATTCCAAAACAAATGCAATGAGGTTGTCATACAAGGGGCTTGTTGAAGGAATACAACATATATTTATAGGCGATCACCTATATTTTTCTGACTCATGGGCGACTGGGTTATAGGAGCACTGATCAACATTGTGGGGAGTGTTGCCATAAACTTTGGgta ] [+] EMBL BM038503 [ AGGAGACCATCAGCGCTTCATCGGTGCTTGCGATCCCGATGGTCTCCTCACGAACAACCAGGGTTCAGAGGAATCGCAACCGACCGATCCAAGTACATTCCTTTGCGGTCGACCGATTGGGNCCATCTATAGTTGACGATGATTTGAATTACAGGTATACAAGCCCAATGTCTTACTTGGATGTTGCCCAGCGGATGCCAGTAAATTTTTGTTGCTTCCGGAAGGCAACTGTTTATTCCACCCCTATAGCTTAGCTGTAACATGAGTGTATAGTTCGATAAAACTTCCCTTGAAACCCTGTCCATACCCACGGTTGTTGTATTTCTTCGAAACCCGGTGCCTACCATACCTTGTATAAACACCCCACACNTGTTAGAACCAACTTCAATGATTCNATTCACTCTTCCCCTTGGTNTTCCAAAAAAAAAAA] consensusID : consensus_10069#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence [TAGTGATGTTTGTATTGGCATNACATCTGTCTTTATAGGCATCTCCTTACTGNCACCCGACGACAGTAAAGTTGACNCCAAAGATGGTTCCTAGTGCCACCCAGGAACCTGCAATTGATGCAAACAGGCCTGGAAAGATGCAGACGGAGGAGCCAGAAGTTGATGGTACTAACTCCTTCACAAGTTCAGTAAAAGTAAAAGCAAAACGCATACTGTCCAAGGCAAAGTCGGCTTGCTCCATGTCACTTGGCCTTGGGGAGGAGACCATCCAGCGCTTCATCGGTGCTTGCGATGCCGATGGTCTCCTCACGAACAACAGGGTTCAGAGGAATCGCAACCGACCGATCNAAGTACATTCCTTTGCGGTCGACCGATTGGGACAATCTATAGTTGACGATGATTTGAATTACAGGTATACAAGCCAAATGTCTTACTTGGATGTTGCCAAGCGGATGCCAGTAAATTTTTGTTGCTTCCGGAAGGCAACTGTTTATTCCACCCCTATAGCTTAGCTGTAACATGAGTGTATAGTTCGATAAAACTTCCCTTGAAACACTGTCCATACCCAGGTTGTTGTATTTCTTCGAAACAGGTGCCTACAATACTTGTATAAACACGCCACACATGTTAGAACAAACTTCAATGATTCAAAAAA] [+] EMBL AU056674 [TAGTGATGTTTGTATTGGCATNACATCTGTCTTTATAGGCATCTCCTTACTGNCACCCGACGACAGTAAAGTTGACNCCAAAGATGGTTCCTAGTGCCACCCAGGAACCTGCAATTGATGCAAACAGGCCTGGAAAGATGCAGACGGAGGAGCCAGAAGTTGATGGTACTAACTCCTTCACAAGTTCAGTAAAAGTAAAAGCAAAACGCATACTGTCCAAGGCAAAGTCGGCTTGCTCCATGTCACTTGGCCTTGGGGAGGAGACCATCCAGCGCTTCATCGGTGCTTGCGATGCCGATGGTCTCCTCACGAACAACAGGGTTCAGAGGAATCGCAACCGACCGATCNAAGTACATTCCTTTGCGGTCGACCGATTGGGACAATCTATAGTTGACGATGATTTGAATTACAGGTATACAAGCCAAATGTCTTACTTGGATGTTGCCAAGCGGATGCCAGTAAATTTTTGTTGCTTCCGGAAGGCAACTGTTTATTCCACCCCTATAGCTTAGCTGTAACATGAGTGTATAGTTCGATAAAACTTCCCTTGAAACACTGTCCATACCCAGGTTGTTGTATTTCTTCGAAACAGGTGCCTACAATACTTGTATAAACACGCCACACATGTTAGAACAAACTTCAATGATTCAAAAAA] consensusID : consensus_10069#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence [CAATACCGCCCACCGGAACGGGAATCGTTAGCGCCGCCATCCGGCAACCGGCAAACGGATCCCGACCAANANACGGGAAACGCGGGCACAACGCGGCAAACCGGAAAGGGCAACGGTCGTCGGATACGGTAACAACGTTCCGTACGGAGTAGGCAACGCGCACGCATCGGTGTGCAAGGCGAAAATCGGCCGGCTGGGTAGTGGATTGGGCCTTGGGGAGGGGACGAGTCAGCAATTGATCGGTGCCTGAAAGGCCGATGGTATCCTCAAGAGCAACAGGGTTCAGAGGAATCGCAACCGGCCGATCAAAGTGCGTTCCTTTGCGGTGGACCGATTGGGGCAATCTATAGTTGCCGATGATTTGAATTACAGGTATGCAAGCCAAATGTCTTACTTGGATGTTGCCAAGCGCATGCCAGTAAATTTTTGTTGCTTCCGGAAGGCAACTGTTTATTCCACCCCTATAGCTTAGCTGTAACATGAGTGTATAGTTCGATAAAACTTCCCTTGAAACACTGTCCATACCCAGGTTGTTGTATTTCTTCGAAACAGGTGCCTACAATACTTGTATAAACACGCCACACATGTTAGAACAAACTTCAATGATTCAATTCACTCTTCCCATTGGTGTCCAAAAAAAA] [-] EMBL CA761378 [CAATACCGCCCACCGGAACGGGAATCGTTAGCGCCGCCATCCGGCAACCGGCAAACGGATCCCGACCAANANACGGGAAACGCGGGCACAACGCGGCAAACCGGAAAGGGCAACGGTCGTCGGATACGGTAACAACGTTCCGTACGGAGTAGGCAACGCGCACGCATCGGTGTGCAAGGCGAAAATCGGCCGGCTGGGTAGTGGATTGGGCCTTGGGGAGGGGACGAGTCAGCAATTGATCGGTGCCTGAAAGGCCGATGGTATCCTCAAGAGCAACAGGGTTCAGAGGAATCGCAACCGGCCGATCAAAGTGCGTTCCTTTGCGGTGGACCGATTGGGGCAATCTATAGTTGCCGATGATTTGAATTACAGGTATGCAAGCCAAATGTCTTACTTGGATGTTGCCAAGCGCATGCCAGTAAATTTTTGTTGCTTCCGGAAGGCAACTGTTTATTCCACCCCTATAGCTTAGCTGTAACATGAGTGTATAGTTCGATAAAACTTCCCTTGAAACACTGTCCATACCCAGGTTGTTGTATTTCTTCGAAACAGGTGCCTACAATACTTGTATAAACACGCCACACATGTTAGAACAAACTTCAATGATTCAATTCACTCTTCCCATTGGTGTCCAAAAAAAA] consensusID : consensus_10069#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence [GGGGATGGAGACACATCATGCGCTTCATCGGTGCTTGCGATGCCGATGGTCTGCCTGCACCGAACACACCACGGGTTCCAGAGGAATCTGCACACCGACCGATGCCAAGTACATTCCTGTTGGCGGTCGACCCGATTGGGACCATCTATAGTTGGAGCGATGGATTTGAATGTACCAGGTATACACAGCCTCAATGGTGCTGTAGCTTGGGATGGTTGGCCCAGCGGATGCCAGTGAAATTTGTTGTTGCTTCCGGAAGGCACACTGTGTTATGTCCACCCCCTATAGGCTTAGCTGTAACACTGGAGTGGTATAGTTGCGATAAAACTTGCCCTTGGAAACCCTGGTGCCATACCCCACGGTTGTTGGTGATTTCTTGCGAAACCACGGTGCCTACNATACTGTGTATAAACNCCCCACACNTGTTAGAACCAACTTCAATGATTCAATTCACTCTTCCCCTTGGTGTTCCAAAAAAAAAA] [+] EMBL BM038527 [GGGGATGGAGACACATCATGCGCTTCATCGGTGCTTGCGATGCCGATGGTCTGCCTGCACCGAACACACCACGGGTTCCAGAGGAATCTGCACACCGACCGATGCCAAGTACATTCCTGTTGGCGGTCGACCCGATTGGGACCATCTATAGTTGGAGCGATGGATTTGAATGTACCAGGTATACACAGCCTCAATGGTGCTGTAGCTTGGGATGGTTGGCCCAGCGGATGCCAGTGAAATTTGTTGTTGCTTCCGGAAGGCACACTGTGTTATGTCCACCCCCTATAGGCTTAGCTGTAACACTGGAGTGGTATAGTTGCGATAAAACTTGCCCTTGGAAACCCTGGTGCCATACCCCACGGTTGTTGGTGATTTCTTGCGAAACCACGGTGCCTACNATACTGTGTATAAACNCCCCACACNTGTTAGAACCAACTTCAATGATTCAATTCACTCTTCCCCTTGGTGTTCCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TCTTCCCCTTCCTCCTCCTCCTCCTCCTCCTCCACGCTTCCGCAAATTTCCGATCTCCTC 60 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 CTCCTCCTCATCCAGCTCGCTCGCTCGCTCGCGGCGGAGAATCCAGCCCGAGCAGGCTGG 120 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 CTTGTGCTTGAGCTAGAATCTCCGGCCCCGTCGCAGGCTCCGTATCAACCAAGATATAAG 180 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 CTCCACACGGTTTATTGAACATTTGTGCCAGACTATTGGGGTGAACATTCAGTCAAGTCT 240 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TCAAAGTGTTTATTCCAAAACAAATGCAATGAGTTGTCATACAAGGGGCTTGTTGAAGGA 300 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 ATACAACATATATTTATAGGCGATCACCTATATTTTTCTGACTCATGGGCGACTGGGTTA 360 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TAGGAGCACTGATCAACATTGTGGGGAGTGTTGCCATAAACTTTGGTACCAACCTTCTGA 420 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 AATTGGGCCATGATCAGAGAGAGAAGCTTTCGACAACCAACAACAATCAAGGCAATGACA 480 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 AATTTGTTCAGAAGTCAGTTATGCATTTTCAAACTTGGAGAATAGGCATACTGTTCTTTG 540 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 CTGCGGGAAACTGCCTCAACTTCATGTCCTTCGCATATGCCGCACAGTCACTTCTTGCAG 600 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 CTCTTGGATCGATTCAATTTGTGTCCAATATTGCATTTGCTTACTTTGTGTTGAACAAGA 660 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 CCATTTCAGTGAAAGTCATGGTAGCAACAACATTTATTGTATTTGGCAATATCTTCCTAG 720 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TTTCCTTTGGTAATCATCAATCTCCAGTTTACACCCCGGAGCAGCTAGTTGCGAAATACA 780 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 GCAATTTAGTGTTTGTTCTCTATTGCATGTCACTGGTCTTTGTGGTTGCATTCAATCAGT 840 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 ATCTCTACAGGAGTGGAGAAACTATCATTTCGGATAGTGCGAAACATACTGGCTCACATT 900 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 GGCGGACATTGTTGCCATTTTCTTATGCTATTGTATCTGGTGCTATTGGATCTTGTTCTG 960 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TCTTATTTGCAAAATCATTGTCAAACATGCTGAGGCTAACAATGAGCAGCAGATACCAGT 1020 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TCCATAGCTGGTTCACATACTCAATGCTTCTGTTGTTCCTCTTTACAGCTGGCTTTTGGA 1080 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TGGCGAGATTGAATGAAGGCCTGTCTCTTTTTGATGCAATACTGATTGTTCCAATGTTTC 1140 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------------------------------ consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 AGATTGCTTGGACCTTTTTTTCTATTTGCACAGGATTTGTGTACTTTCAAGAATATCAAG 1200 consensus_10069#1 ------------------------------------------------------------ consensus_10069#2 ------------------------------------CAATACCGCCCACCGGAACGGGAA 24 consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TATTTGATACCCTGAGGATAGTGATGTTTGTATTGGGCATGACATCTGTCTTTATAGGCA 1260 consensus_10069#1 ------------------TAGTGATGTTTGTATTGG-CATNACATCTGTCTTTATAGGCA 41 consensus_10069#2 TCGTTAGCGCCGCCATCCGGCAACCGGCAAA-------C------GGATC------CCGA 65 consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TC-TCCTTACTGGCACCCGACGACAGTAAAG------------ATGGTTC-TAGTGCCAC 1306 consensus_10069#1 TC-TCCTTACTGNCACCCGACGACAGTAAAGTTGACNCCAAAGATGGTTCCTAGTGCCAC 100 consensus_10069#2 CCAANANACGGGAA---ACGCGGGCACAACGCGGCAAACCGGAAAGGGCAACGGTCGTCG 122 consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 CCAGGAACCTGCAATTGATGCAAACA-GGCCTGGAAAGATGCAGACGGAGGAGACAGAAG 1365 consensus_10069#1 CCAGGAACCTGCAATTGATGCAAACA-GGCCTGGAAAGATGCAGACGGAGGAGCCAGAAG 159 consensus_10069#2 GATACGGTAACAACGTTCCGTACGGAGTAGGCAACGCGCACGCAT------CGGTGTGCA 176 consensus_10069#3 ------------------------------------------------------------ consensus_10069#0 TTGATGGTACTAACTCCTTCACAAGTTCAGTAAAAGTAAAAGCAAAACGCATACTGTCCA 1425 consensus_10069#1 TTGATGGTACTAACTCCTTCACAAGTTCAGTAAAAGTAAAAGCAAAACGCATACTGTCCA 219 consensus_10069#2 AGGCGAAAATCGGCCGGCTGGGTAGTGGATTGGGCCTTGGGGAGGGGACGAGTCA-GCAA 235 consensus_10069#3 -------------------------------------GGGGATGGAGACACATCATGCGC 23 consensus_10069#0 AGGC-AAAGTCGGCTTGCTCCATGTC--ACTTGGCCTTGGGGAGGAGACCATC-A-GCGC 1480 consensus_10069#1 AGGC-AAAGTCGGCTTGCTCCATGTC--ACTTGGCCTTGGGGAGGAGACCATCCA-GCGC 275 *** ** *** * ** consensus_10069#2 TTGATCGGTGCCTGAAAGGCCGATGGTATCCT-----CAAGAGCA--ACAGGGTTCAGAG 288 consensus_10069#3 TTCATCGGTGCTTGCGATGCCGATGGTCTGCCTGCACCGAACACACCACGGGTTCCAGAG 83 consensus_10069#0 TTCATCGGTGCTTGCGATGCCGATGGTCTCCT-----CACGAACA--ACAGGGTTCAGAG 1533 consensus_10069#1 TTCATCGGTGCTTGCGATGCCGATGGTCTCCT-----CACGAACA--ACAGGGTTCAGAG 328 ** ******** ** * ********* * * * ** ** ** * ***** consensus_10069#2 GAATC-GCA-ACCGGCCGAT-CAAAGTGCGTTCCTTT--GCGGTGGACC-GATTGGGGCA 342 consensus_10069#3 GAATCTGCACACCGACCGATGCCAAGTACATTCCTGTTGGCGGTCGACCCGATTGGGACC 143 consensus_10069#0 GAATC-GCA-ACCGACCGAT-CAAAGTACATTCCTTT--GCGGTCGACC-GATTGGGACA 1587 consensus_10069#1 GAATC-GCA-ACCGACCGAT-CNAAGTACATTCCTTT--GCGGTCGACC-GATTGGGACA 382 ***** *** **** ***** * **** * ***** * ***** **** ******* * consensus_10069#2 ATCTATAGTTGC--CGATG-ATTTGAAT-TAC-AGGTATGCA-AGCCA-AATG----TCT 391 consensus_10069#3 ATCTATAGTTGGAGCGATGGATTTGAATGTACCAGGTATACACAGCCTCAATGGTGCTGT 203 consensus_10069#0 ATCTATAGTTGA--CGATG-ATTTGAAT-TAC-AGGTATACA-AGCCA-AATG----TCT 1636 consensus_10069#1 ATCTATAGTTGA--CGATG-ATTTGAAT-TAC-AGGTATACA-AGCCA-AATG----TCT 431 *********** ***** ******** *** ****** ** **** **** * * consensus_10069#2 TACTTGG-ATG--TTGCCAAGCGCATGCCAGTAAATTTT--TGTTGCTTCCGGAAGGCA- 445 consensus_10069#3 AGCTTGGGATGGTTGGCCCAGCGGATGCCAGTGAAATTTGTTGTTGCTTCCGGAAGGCAC 263 consensus_10069#0 TACTTGG-ATG--TTGCCAAGCGGATGCCAGTAAATTTT--TGTTGCTTCCGGAAGGCA- 1690 consensus_10069#1 TACTTGG-ATG--TTGCCAAGCGGATGCCAGTAAATTTT--TGTTGCTTCCGGAAGGCA- 485 ***** *** * *** **** ******** ** *** ****************** consensus_10069#2 ACTGT-TTAT-TCCACCCC-TATAG-CTTAGCTGTAACAT--GAGTG-TATAGTT-CGAT 497 consensus_10069#3 ACTGTGTTATGTCCACCCCCTATAGGCTTAGCTGTAACACTGGAGTGGTATAGTTGCGAT 323 consensus_10069#0 ACTGT-TTAT-TCCACCCC-TATAG-CTTAGCTGTAACAT--GAGTG-TATAGTT-CGAT 1742 consensus_10069#1 ACTGT-TTAT-TCCACCCC-TATAG-CTTAGCTGTAACAT--GAGTG-TATAGTT-CGAT 537 ***** **** ******** ***** ************* ***** ******* **** consensus_10069#2 AAAACTTCCCTT--GAAACACTGT--CCATACCC--AGGTTGTTG--TATTTCTT-CGAA 548 consensus_10069#3 AAAACTTGCCCTTGGAAACCCTGGTGCCATACCCCACGGTTGTTGGTGATTTCTTGCGAA 383 consensus_10069#0 AAAACTTCCCTT--GAAACACTGT--CCATACCC--AGGTTGTTG--TATTTCTT-CGAA 1793 consensus_10069#1 AAAACTTCCCTT--GAAACACTGT--CCATACCC--AGGTTGTTG--TATTTCTT-CGAA 588 ******* ** * ***** *** ******** ******** ******* **** consensus_10069#2 AC--AGGTGCCTACAATACT-TGTATAAACACGCCACACATGTTAGAACAAACTTCAATG 605 consensus_10069#3 ACCACGGTGCCTACNATACTGTGTATAAACNCCCCACACNTGTTAGAACCAACTTCAATG 443 consensus_10069#0 AC--AGGTGCCTACAATACT-TGTATAAACACGCCACACATGTTAGAACAAACTTCAATG 1850 consensus_10069#1 AC--AGGTGCCTACAATACT-TGTATAAACACGCCACACATGTTAGAACAAACTTCAATG 645 ** ********* ***** ********* * ****** ********* ********** consensus_10069#2 ATTCAATTCACTCTTCCCATTGGTGTCCAAAAAAAA---- 641 consensus_10069#3 ATTCAATTCACTCTTCCCCTTGGTGTTCCAAAAAAAAAA- 482 consensus_10069#0 ATTCAATTCACTCTTCCCATTGGTNTTCCAAAAAAAAAAA 1890 consensus_10069#1 ATTCAAAAAA------------------------------ 655 ****** * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||