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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10071#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1593 fasta sequence
[GTCGCGTCGCCCTCCTCGGGCCGCTCATCACCTTCGCCTCCCCGCCCTGCCTTGGCCGCCGCCGCGCACAGCCAAGCCGGCTGCGCGGGCGCCGCCTCCGCACACGGCCGAGCCGGCTCGCGCGGGCGCTTCCTCCACGACCCCGGCCGTCTCCGTCCCTGCCTGGCCGGGAGGTCGCCGAAACCGCCGCCACCGACTGGCTAAGCCGCTCGCCTCCTTCAACCGCGGCGCCGTCGCCTCGTCTCCCTCGCCTGGCCACGCTGGTGCAGCGTGTTCGCCACCCATGCAGAGCCGGCCAAGTCGATGCACCGCCGGCCGAGCCATCGGCGCCCCGATCTCCTCCTCGTGCCGCCACCTCCTCTTCCCCGCCTCCCCAAGAGTAGCCGCCGGGCTGCCGACGCCGGCCGTGGCCTCCTCACACCCGCCGGCCTCCGTGCTGCCGCGCCGCCCGGCCTCCTTTTCCCCACCGGCGCCCCGGTCTCTCCTCCCCGGCGTGCCGCGCTGCGCCAGGCCGCCGCTGTGGCCGGCCGCTGCCCTTGTTCAGCCGGTCGCCTCCTGCTCAAGCGTGCGTGCGCGCGTGGTCAGGAGAAAAGCGAAAGAAGAGGAGAAGCCTAGGAGAAGAAAACACAAAGAAGGATCGGGAGAAAGAAATAAGAAGAAAAGAAAGAGAGAGAGAAAAGAGACCGTGAGACCCACTGGCGGGACCGACGTGCTTGACTCATTCTCCCTGCCCTTTTGACCCCTCCTAAAGTCTGTTTCATCTCCCTTTTCTCCCTCGGGCCAAAATTCTTATTACATCCCTCCAGAACCCAAGTTCCTCCCTGAAAGTCTAAGATACGTCCCTACCCGACCTCCTGTATCCTTGGGTTGAAGCCCAAGCTCACCCAAGGATAAGTTCATTGTACGTCCTATTTTGTCTCATTGTCAGGTGGGACCCAGTGGACCCCGTGAGGAATATTCCTTCGGAATATTCTTTTCCAGTGAGGGAAATCATCCTTTTCCTCGGTTTATAAATCCTTTTTAAACTTCGGAAATCCATATCTTCCAAACCGTGACTCCGATTGATTCCGTTCAACTTCCGGAATTTTTCTAAAATCAGGATCTATCCAATGACACTTCTGGTTTGAATTGATTGGTACTTTATTTGGAGCATGTTATATGGTTTTCTCGTGCTAACCGCGTATCGGGTATTCCGGCTATTCGTCGACCGTGGTTTTCTCGAAGATATCGGTTTCTAAAAGCAAGAGAAGAGTTGGAGTCGACTGTTCGGAAATAATGCTGATGAACAGATGTCGAAGATGGTGGAGTCGGGACCTAGGTTCACCAGTCGATGCCTGTGGAGTACGATGGACCACCGCTGCTTCGCTTCCGCCATCTCATCTACTTCTTCTGGTATTTTGTAATGTACCTGTCCATGCTAGGTCTATTTGGGTCTCATTTGGGCTACCCTTGTAATATTAATATACAGTTTAACCGGTATAACGATGTCAGCTTGAGATATTCAACTGTGCCATGTGTGTACCATCTACTGATCCAGGGAATGGTATTGTAAGACACATGGGGATTCCGGTGTATAAAACCGGGGGCCCACAG]
[+] EMBL AK120918 [GTCGCGTCGCCCTCCTCGGGCCGCTCATCACCTTCGCCTCCCCGCCCTGCCTTGGCCGCCGCCGCGCACAGCCAAGCCGGCTGCGCGGGCGCCGCCTCCGCACACGGCCGAGCCGGCTCGCGCGGGCGCTTCCTCCACGACCCCGGCCGTCTCCGTCCCTGCCTGGCCGGGAGGTCGCCGAAACCGCCGCCACCGACTGGCTAAGCCGCTCGCCTCCTTCAACCGCGGCGCCGTCGCCTCGTCTCCCTCGCCTGGCCACGCTGGTGCAGCGTGTTCGCCACCCATGCAGAGCCGGCCAAGTCGATGCACCGCCGGCCGAGCCATCGGCGCCCCGATCTCCTCCTCGTGCCGCCACCTCCTCTTCCCCGCCTCCCCAAGAGTAGCCGCCGGGCTGCCGACGCCGGCCGTGGCCTCCTCACACCCGCCGGCCTCCGTGCTGCCGCGCCGCCCGGCCTCCTTTTCCCCACCGGCGCCCCGGTCTCTCCTCCCCGGCGTGCCGCGCTGCGCCAGGCCGCCGCTGTGGCCGGCCGCTGCCCTTGTTCAGCCGGTCGCCTCCTGCTCAAGCGTGCGTGCGCGCGTGGTCAGGAGAAAAGCGAAAGAAGAGGAGAAGCCTAGGAGAAGAAAACACAAAGAAGGATCGGGAGAAAGAAATAAGAAGAAAAGAAAGAGAGAGAGAAAAGAGACCGTGAGACCCACTGGCGGGACCGACGTGCTTGACTCATTCTCCCTGCCCTTTTGACCCCTCCTAAAGTCTGTTTCATCTCCCTTTTCTCCCTCGGGCCAAAATTCTTATTACATCCCTCCAGAACCCAAGTTCCTCCCTGAAAGTCTAAGATACGTCCCTACCCGACCTCCTGTATCCTTGGGTTGAAGCCCAAGCTCACCCAAGGATAAGTTCATTGTACGTCCTATTTTGTCTCATTGTCAGGTGGGACCCAGTGGACCCCGTGAGGAATATTCCTTCGGAATATTCTTTTCCAGTGAGGGAAATCATCCTTTTCCTCGGTTTATAAATCCTTTTTAAACTTCGGAAATCCATATCTTCCAAACCGTGACTCCGATTGATTCCGTTCAACTTCCGGAATTTTTCTAAAATCAGGATCTATCCAATGACACTTCTGGTTTGAATTGATTGGTACTTTATTTGGAGCATGTTATATGGTTTTCTCGTGCTAACCGCGTATCGGGTATTCCGGCTATTCGTCGACCGTGGTTTTCTCGAAGATATCGGTTTCTAAAAGCAAGAGAAGAGTTGGAGTCGACTGTTCGGAAATAATGCTGATGAACAGATGTCGAAGATGGTGGAGTCGGGACCTAGGTTCACCAGTCGATGCCTGTGGAGTACGATGGACCACCGCTGCTTCGCTTCCGCCATCTCATCTACTTCTTCTGGTATTTTGTAATGTACCTGTCCATGCTAGGTCTATTTGGGTCTCATTTGGGCTACCCTTGTAATATTAATATACAGTTTAACCGGTATAACGATGTCAGCTTGAGATATTCAACTGTGCCATGTGTGTACCATCTACTGATCCAGGGAATGGTATTGTAAGACACATGGGGATTCCGGTGTATAAAACCGGGGGCCCACAG]
consensusID : consensus_10071#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1511 fasta sequence
[GACCATCTTCCCCAGTCCAACCGGCGCCGCCCCGACGACCTCCGCCGTCGCCGCACAGGCCATTCCCCATCCGCCGTCACCTCAGGCCGCGCCATCGCGATCGGTCAACGGCCAGGCCGCGGCGCCAAGCGCCGAGCGCCGCCGTGTGGAGCGCCGCCTCCTCGCGTGGCCGCCTCCACGCGCGCCGCCTCTGCGACCATCCAGCGGCCAGCACCTCCACCTCCGCCTCCTCTGGTCGGCGCCGCCCCGATCTCCTCCTCGCCGCGCCGACCATCTTCCCCGTCCAACCGGCGCCGCCCCGACGACCTCCGTCGTCGCCGCACAGGCCATTCCCCATCCGCCGTCACCTCAGGCCGCGCCATCGCGATCGGTCACCGGCCAGGCCGCGGCGCCAAGCGCCGAGCGCCGCCGTGTCGCCTCCTGCCGCGCCGCTGGTGCCCCGGCCCTCTTCCTTCCCCGACGCCGCCGGGCCATCTCCAGGCTGCCGTCGCACGGGCCGGCACCCAGTCACCGCGCCGTCGCCGACCCTCGCCCCGGCCTCCCTTTCCCCACCGGCGCCGCTCCCTTTCTCCTTTCTCCTTCCCCCACCGCCGCCCAGCACCAGGCCCCCGTCGCCGGCACTCCTCTTCTCTCGGGCACGCGTGAGGAAACCGAGGCAGAGAAGGAATCGAGAGAGAGATGCGAGGAGAAGAAAGCGAGAAACAGATCAGGTTAAGAGAGAGAGGAAATAAAAGGAAAGGAAAAGAAAGGGACAGTGGGACCCAC-TAGGGCTCCACCATCTTGACTCCTCTCTCTGACCTCCTTTGACCTGGAAACTACCAAAAAGTCTAGCTTGCATACCTCTGTCTTCCTCGGGACAGAGCCCACTTTCAGCCCCTTTATCCACCAAAGTCCATATTACATCTCTCCAGAA-CCCAAGTTCCTCTCTGAAAGTCTGTATTTTATCCCTCCTCCAAACTTCGGGCAGTA-CCCATCAGTAGTCTTCA-TCT-CACCCAAGTCCAATATATC-CCTCCCATTTAGAGGATCNNC-CGGGGTTATTTCTTCC-AACAT-AAAGGAA--CTCATTTGGGTATCCTTTTCCTCGATTTATAAATCATCTAATCTTCGAGAATTCATATCTTGCAAACTGTGACTCCGATTGATTCCATTCAACTTCCGAAACTCTTCTAAAATCGAGATCTATCCAATGACACTGCTGGTTTGAATTGATTGGTACTTTATTTGGAGGTTGGTATATGGNTTTCTCGTGCTAACCACGTATCGAGTATTCCGGATATTCGNCGATCGNGGATTTCTCGAAGATACCGGGTTCTAAAAGCAAGGCAAGTCACTACGCTCCCCCTNCTTGAGCATATTGAACCCAGGTTATAAACGGTTTGGTTATAAATAAAGGTGCATGCTAATTATAAAATGGNGNGCCTAAATTGNATGNGAACCATCCTTGANATTGGTACCTTTATATATCCCTTGGTGCCTGAGTCAAAAGCGGCCGCGAATTCGCGGCCGCTAGCGGC]
[-] EMBL CB643034 [GACCATCTTCCCCAGTCCAACCGGCGCCGCCCCGACGACCTCCGCCGTCGCCGCACAGGCCATTCCCCATCCGCCGTCACCTCAGGCCGCGCCATCGCGATCGGTCAACGGCCAGGCCGCGGCGCCAAGCGCCGAGCGCCGCCGTGTGGAGCGCCGCCTCCTCGCGTGGCCGCCTCCACGCGCGCCGCCTCTGCGACCATCCAGCGGCCAGCACCTCCACCTCCGCCTCCTCTGGTCGGCGCCGCCCCGATCTCCTCCTCGCCGCGCCGACCATCTTCCCCGTCCAACCGGCGCCGCCCCGACGACCTCCGTCGTCGCCGCACAGGCCATTCCCCATCCGCCGTCACCTCAGGCCGCGCCATCGCGATCGGTCACCGGCCAGGCCGCGGCGCCAAGCGCCGAGCGCCGCCGTGTCGCCTACTGCCGCGCCGCTGGTGCCCCGGCCCTCTTCCTTCCCCGACGCCGCCGGGCCATCTCCAGGCTGCCGTCGCACGGGCCGGCACCCAGTCACCGCGCCGTCGCCGACCCTCGCCCCGGCCTCCCTTTCCCCACCGGCGCCGCTCCCTTTCTCCTTTCTCCTTCCCCCACCGCCGCCCAGCACCAGGCCCCCGTCGCCGGCACTCCTCTTCTCTCGGGCACGCGTGAGGAAACCGAGGCAGAGAAGGAATCGAGAGAG ]
[+] EMBL AK111126 [ GCGCCGACCATCTTCCCCGTCCAACCGGCGCCGCCCCGACGACCTCCGTCGTCGCCGCACAGGCCATTCCCCATCCGCCGTCACCTCAGGCCGCGCCATCGCGATCGGTCACCGGCCAGGCCGCGGCGCCAAGCGCCGAGCGCCGCCGTGTCGCCTCCTGCCGCGCCGCTGGTGCCCCGGCCCTCTTCCTTCCCCGACGCCGCCGGGCCATCTCCAGGCTGCCGTCGCACGGGCCGGCACCCAGTCACCGCGCCGTCGCCGACCCTCGCCCCGGCCTCCCTTTCCCCACCGGCGCCGCTCCCTTTCTCCTTTCTCCTTCCCCCACCGCCGCCCAGCACCAGGCCCCCGTCGCCGGCACTCCTCTTCTCTCGGGCACGCGTGAGGAAACCGAGGCAGAGAAGGAATCGAGAGAGAGATGCGAGGAGAAGAAAGCGAGAAACAGATCAGGTTAAGAGAGAGAGGAAATAAAAGGAAAGGAAAAGAAAGGGACAGTGGGACCCAC TAGGGCTCCACCATCTTGACTCCTCTCTCTGACCTCCTTTGACCTGGAAACTACCAAAAAGTCTAGCTTGCATACCTCTGTCTTCCTCGGGACAGAGCCCACTTTCAGCCCCTTTATCCACCAAAGTCCATATTACATCTCTCCAGAA CCCAAGTTCCTCTCTGAAAGTCTGTATTTTCTCCCTCCTCCAAACTTCGGGCAGTA ]
[+] EMBL CA753310 [ GCCGTGTCGCCTCCTGCCGCGCCGCTGGTGCCCCGGCCCTCTTCCTTCCCCGACGCCGCCGGGCCATCTCCAGGCTGCCGTCGCACGGGCCGGCACCCAGTCACCGCGCCGTCGCCGACCCTCGCCCCGGCCTCCCTTTCCCCACCGGCGCCGCTCCCTTTCTCCTTTCTCCTTCCCCCACCGCCGCCCAGCACCAGGCCCCCGTCGCCGGCACTCCTCTTCTCTCGGGCACGCGTGAGGAAACCGAGGCAGAGAAGGAATCGAGAGAGAGATGCGAGGAGGAGAAAGCGAGAAACAGATCAGGTTA AGAGAGAGGAAATAAAAGGAAAGGAAAAGAAAGGGACAGTGGGACCCACTTAGGGCTCCACCATCTTGACTCCTCTCTCTGACCTCCTTCGACCTGGAAACTACCAAAAAGTTTAGCTTGCATACCTCTGTTTCCCTCGGGACAGAGCCCACTTTCAGCCCCTTTATCCACCAAAGTCCATATGACATGTCTCCAGAACCCCAAGTACCAC CTGAACGTGGGTATCTTATCCCTCCTCCAAACTTCGGGCAGTA CCCATCAGTAGTCTTCATTCT CACCCAAGTCCAATATATC CCTCCCATTTAGAGGATCNNC CGGGGTTATTTCTTCC AACAT AAAGGAA CTCATTTGGGg ]
[+] EMBL CA765521 [ GCCCACTTTGAGCCCCNNNATCCACCAAAGTCCATATTACATCTCTCCAGAA CCCAAGTTCCTCTCTGAAAGTCTGTATTTTATCCCTCCTCCAAACTTCGGGCAGTAGCCCATCAGTAGTCTTCA TCTCCACCCAAGTCCAATATATCTCCTCCAATCTAGAGGACCACCTTGGGTTTATTTCTTCCGAAAATAAAAGGAATCCTATTTTGGGTATCCTTTTCCTCGATTTATAAATCATCTAATCTTCGAGAATTCATATCTTGCAAACTGTGACTCCGATTGATTCCATTCAACTTCCGAAACTCTTCTAAAATCGAGATCTATCCAATGACACTGCTGGTTTGAATTGATTGGTACTTTATTTGGAGGTTGGTATATGGNTTTCTCGTGCTAACCACGTATCGAGTATTCCGGATATTCGNCGATCGNGGATTTCTCGAAGATACCGGGTTCTAAAAGCAAGGCAAGTCACTACGCTCCCCCTNCTTGAGCATATTGAACCCAGGTTATAAACGGTTTGGTTATAAATAAAGGTGCATGCTAATTATAAAATGGNGNGCCTAAATTGNATGNGAACCATCCTTGANATTGGTACCTTTATATATCCCTTGGT ]
[-] EMBL AU225579 [ GGTATCC TTTCCTCGATTTATAAATCATCTCATCTTCGAGAATTCATATCTTGC AACCGTGACTCCGATTGATTCCATTCAACTTCCGAAACTCTTCTAAAATCGAGATCTATCCAATGACACTGCTGGTTTGAATTGATTGGTACTTTATTTGGAGGTTGTTATATGGTTTTCTCGTGCTAACCACGTATCGAGTATTCCGGATATTCGTCGATCGTGGATTTCTCGAAGATACCGATTTCTAAAAGCAAGGCAAGTCACTACGCT CCCCTCCTTGAGCATATTGAACCCAGTTTATAAATGTTTTGTTTATAAATAAAGTTGCATGCTAATTATAAAATGGCGTGCCTAAATTGTATGTGAACCATCCTTGATATTGTTACCTTTATATAT CCTTGTTGCCTGAGTCAAAAGCGGCCGCGAATTCGCGGCCGCTAGCGGC]
consensusID : consensus_10071#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 972 fasta sequence
[TCGCGTCGCCCTCCTCGGGCCGCTCATCACCTTCGCCTCCCCGCCCTGCCTTGGCCGCCGCCGCGCACAGCCAAGCCGGCTGCGCGGGCGCCGCCTCCGCACACGGCCGAGCCGGCTCGCGCGGGCGCTTCCTCCACGACCCCGGCCGTCTCCGTCCCTGCCTGGCCGGGAGGTCGCCGAAACCGCCGCCACCGACTGGCTAAGCCGCTCGCCTCCTTCAACCGCGGCGCCGTCGCCTCGTCTCCCTCGCCTGGCCACGCTGGTGCAGCGTGTTCGCCACCCATGCAGAGCCGGCCAAGTCGATGCACCGCCGGCCGAGCCATCGGCGCCCCGATCTCCTCCTCGTGCCGCCACCTCCTCTTCCCCGCCTCCCCAAGAGTAGCCGCCAGGCTGCCGACGCCGGCCGTGGCCTCCTCACACCCGCCGGCCTCCGTGCTGCCGCGCCGCCCGGCCTCCTTTTCCCCACCGGCGCCCCGGTCTCTCCTCCCCGGCGTGCCGCGCTGCGCCAGGCCGCCGCTGTGGCCGGCCGCTGCCCTTGTTCAGCCGGTCGCCTCCTGCTCAAGCGTGCGTGCGCGCGTGGTCAGGAGAAAAGCGAAAGAAGAGGAGAAGCCTAGGAGAAGAAAACACAAAGAAGGATCGGGAGAAAGAAATAAGAAGAAAAGAAAGAGAGAGAGAAAAGGGACCGTGAGACCCACTGGCGGGACCGACGTGCTTGACTCATTCTCCCTGCCCTTTTGACCCCTCCTAAAGTCTGTTTCATCTCCCTTTTCTCCCTCGGGCCAAAATTCTTATTACATCCCTCCAGAACCCAAGTTCCTCCCTGAAAGTCTAAGATACGTCCCTACCCGACCTCCTGTATCCTTGGGTTGAAGCCCAAGCTCACCCAAGGATAAGTTCATTGTACGTCCTATTTTGTCTCATTTGGGCTACCCTTGTAATATTAATATACAGTTTAACCGGTATAACGATGTC]
[+] EMBL AK119445 [TCGCGTCGCCCTCCTCGGGCCGCTCATCACCTTCGCCTCCCCGCCCTGCCTTGGCCGCCGCCGCGCACAGCCAAGCCGGCTGCGCGGGCGCCGCCTCCGCACACGGCCGAGCCGGCTCGCGCGGGCGCTTCCTCCACGACCCCGGCCGTCTCCGTCCCTGCCTGGCCGGGAGGTCGCCGAAACCGCCGCCACCGACTGGCTAAGCCGCTCGCCTCCTTCAACCGCGGCGCCGTCGCCTCGTCTCCCTCGCCTGGCCACGCTGGTGCAGCGTGTTCGCCACCCATGCAGAGCCGGCCAAGTCGATGCACCGCCGGCCGAGCCATCGGCGCCCCGATCTCCTCCTCGTGCCGCCACCTCCTCTTCCCCGCCTCCCCAAGAGTAGCCGCCAGGCTGCCGACGCCGGCCGTGGCCTCCTCACACCCGCCGGCCTCCGTGCTGCCGCGCCGCCCGGCCTCCTTTTCCCCACCGGCGCCCCGGTCTCTCCTCCCCGGCGTGCCGCGCTGCGCCAGGCCGCCGCTGTGGCCGGCCGCTGCCCTTGTTCAGCCGGTCGCCTCCTGCTCAAGCGTGCGTGCGCGCGTGGTCAGGAGAAAAGCGAAAGAAGAGGAGAAGCCTAGGAGAAGAAAACACAAAGAAGGATCGGGAGAAAGAAATAAGAAGAAAAGAAAGAGAGAGAGAAAAGGGACCGTGAGACCCACTGGCGGGACCGACGTGCTTGACTCATTCTCCCTGCCCTTTTGACCCCTCCTAAAGTCTGTTTCATCTCCCTTTTCTCCCTCGGGCCAAAATTCTTATTACATCCCTCCAGAACCCAAGTTCCTCCCTGAAAGTCTAAGATACGTCCCTACCCGACCTCCTGTATCCTTGGGTTGAAGCCCAAGCTCACCCAAGGATAAGTTCATTGTACGTCCTATTTTGTCTCATTTGGGCTACCCTTGTAATATTAATATACAGTTTAACCGGTATAACGATGTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10071#0 -------------------------------------------------GTCGCGTCGCC 11
consensus_10071#2 --------------------------------------------------TCGCGTCGCC 10
consensus_10071#1 GACCATCTTCCCCAGTCCAACCGGCGCCGCCCCGACGACCTCCGCCGTCGCCGCACAGGC 60
*** * *
consensus_10071#0 CTCCTCGGGCCGCTCATCACCTT------CGCCTCCCCGCCCTGCCT-TGGCC--GCCGC 62
consensus_10071#2 CTCCTCGGGCCGCTCATCACCTT------CGCCTCCCCGCCCTGCCT-TGGCC--GCCGC 61
consensus_10071#1 CATTCCCCATCCGCCGTCACCTCAGGCCGCGCCATCGCGATCGGTCAACGGCCAGGCCGC 120
* * * * ****** **** * ** * * * **** *****
consensus_10071#0 CGCGCACAGC--CAAGC-CGGCTGCGCGG-GCGCCGCCTCCGCACACGGCCGAGCCGGCT 118
consensus_10071#2 CGCGCACAGC--CAAGC-CGGCTGCGCGG-GCGCCGCCTCCGCACACGGCCGAGCCGGCT 117
consensus_10071#1 GGCGCCAAGCGCCGAGCGCCGCCGTGTGGAGCGCCGCCTCCTCGCGTGGCCGCCTCCACG 180
**** *** * *** * ** * * ** *********** * * ***** * *
consensus_10071#0 CGCGCGGGCGCTTCCTCCA--CGACCCCGGCCGTCTCCGTCCCTGCCTGGCCGGGAGGTC 176
consensus_10071#2 CGCGCGGGCGCTTCCTCCA--CGACCCCGGCCGTCTCCGTCCCTGCCTGGCCGGGAGGTC 175
consensus_10071#1 CGCGCCGCCTCTGCGACCATCCAGCGGCCAGCACCTCCACCTCCGCCTCCTCTGGTCGGC 240
***** * * ** * *** * * * * **** * * **** * ** * *
consensus_10071#0 GCCGAAACCGCCGCCACCGACTGGCTAAGCCGCTCGCCTCCTTCAACCG--CGGCGCCGT 234
consensus_10071#2 GCCGAAACCGCCGCCACCGACTGGCTAAGCCGCTCGCCTCCTTCAACCG--CGGCGCCGT 233
consensus_10071#1 GCCG---CCCCGATCTCCTCCTCGCCGCGCCGACCATCTTCCCCGTCCAACCGGCGCCGC 297
**** ** * * ** ** ** **** * ** * * ** ********
consensus_10071#0 CGCCTCG-TCTCCCTCGCCTGGCCACGCTGGT-GCAGCGTGTTCGCCACCCATGCAGAGC 292
consensus_10071#2 CGCCTCG-TCTCCCTCGCCTGGCCACGCTGGT-GCAGCGTGTTCGCCACCCATGCAGAGC 291
consensus_10071#1 CCCGACGACCTCCGTCGTC--GCCGCACAGGCCATTCCCCATCCGCCGTCACCTCAGGCC 355
* * ** **** *** * *** * * ** * * **** * *** *
consensus_10071#0 CGGCCAAGTCGATGCACCGCCGGCCGAGCCATCGGCGCCCCGATCTCCTCCTCGTGCCGC 352
consensus_10071#2 CGGCCAAGTCGATGCACCGCCGGCCGAGCCATCGGCGCCCCGATCTCCTCCTCGTGCCGC 351
consensus_10071#1 GCGCCATCGCGATCGGTCACCGGCCAGGCCG-CGGCGCCAAGCGCCGAGCGCCGCCGTGT 414
**** **** * ****** *** ******* * * * ** *
consensus_10071#0 CACCTCCT-CTTCCCCGCCTCCCCAAGAGTAGCCGCCGGGCTGCCGACGCCGGCCGTGGC 411
consensus_10071#2 CACCTCCT-CTTCCCCGCCTCCCCAAGAGTAGCCGCCAGGCTGCCGACGCCGGCCGTGGC 410
consensus_10071#1 CGCCTCCTGCCGCGCCGCTGGTGCCCCGGCCCTCTTCCTTCC-CCGACGCCG-CCG-GGC 471
* ****** * * **** * * * * * ********* *** ***
consensus_10071#0 CTCCTCACACCCGCCGGCCTCCGTGCTGCCGCGCCGCCCGGCCTCCTTTTCCCCACCGGC 471
consensus_10071#2 CTCCTCACACCCGCCGGCCTCCGTGCTGCCGCGCCGCCCGGCCTCCTTTTCCCCACCGGC 470
consensus_10071#1 CATCTCCAGGCTGCCGTCGCACGGGCCGGCAC-CCAGTCACCGCGCCGTCGCCGACCCTC 530
* *** * **** * ** ** * * * ** * * * * ** *** *
consensus_10071#0 GCCCCGGTCTCTCCTCCCCGGCGTGCCGCGCTGCGCCAGGCCGC-CGCTGTGGCCGGCCG 530
consensus_10071#2 GCCCCGGTCTCTCCTCCCCGGCGTGCCGCGCTGCGCCAGGCCGC-CGCTGTGGCCGGCCG 529
consensus_10071#1 GCCCCGGCCTCCCTTTCCCCACCGGCGCCGCTCCCTTTCTCCTTTCTCCTTCCCCCACCG 590
******* *** * * *** * ** **** * ** * * * ** ***
consensus_10071#0 CTGCCCTTGTTCAG---CCGGTCGCC-----TCCTGCTCAAGCGTGCGTGCGCGCGTGGT 582
consensus_10071#2 CTGCCCTTGTTCAG---CCGGTCGCC-----TCCTGCTCAAGCGTGCGTGCGCGCGTGGT 581
consensus_10071#1 CCGCCCAGCACCAGGCCCCCGTCGCCGGCACTCCTCTTCTCTCGGGCACGCGTGAGGAAA 650
* **** *** ** ****** **** ** ** ** *** * *
consensus_10071#0 C--AGGAGAAAAGCGAAAGAAGAGGAGAAGCCTAGGAGAAGAAAACACAAAGAAGGATCG 640
consensus_10071#2 C--AGGAGAAAAGCGAAAGAAGAGGAGAAGCCTAGGAGAAGAAAACACAAAGAAGGATCG 639
consensus_10071#1 CCGAGGCAGAGAAGGAATCGAGAGAGAGATGCGAGGAGAAGAAAGCG-AGAAACAGATCA 709
* *** * * *** **** * * *********** * * * * ****
consensus_10071#0 GGAGAAAGAAATAAGAAGAAAAGAAAGAGAGAGAGAAAAGAGACCGTGAGACCCACTGGC 700
consensus_10071#2 GGAGAAAGAAATAAGAAGAAAAGAAAGAGAGAGAGAAAAGGGACCGTGAGACCCACTGGC 699
consensus_10071#1 GGTTAAGAGAGAGAGGAAATAAAAGGAAAGGAAAAGAAAGGGACAGTGGGACCCACTAG- 768
** ** * ** * * ** * * ** * **** *** *** ******** *
consensus_10071#0 GGGACCGACGTGCTTGACTCATTCTCCCTGCCCT--TTTGACCC-----CTCCTAAA--G 751
consensus_10071#2 GGGACCGACGTGCTTGACTCATTCTCCCTGCCCT--TTTGACCC-----CTCCTAAA--G 750
consensus_10071#1 -GGCTCCACCATCTTGACTC-CTCTCTCTGACCTCCTTTGACCTGGAAACTACCAAAAAG 826
** * ** ******** **** *** *** ******* ** * *** *
consensus_10071#0 TCTGTTTCATCTCCCTTT-TCTCCCTCGGGCCAAAATTCTTATTACATCCCTCCAGAACC 810
consensus_10071#2 TCTGTTTCATCTCCCTTT-TCTCCCTCGGGCCAAAATTCTTATTACATCCCTCCAGAACC 809
consensus_10071#1 TCTAGCTTGCATACCTCTGTCTTCCTCGGGACAGAGCCCACTTTCAGCCCCTTTATCCAC 886
*** * * *** * *** ******* ** * * ** **** * *
consensus_10071#0 CAAGTTCCTCCCTGAAAGTCT----AAGATACGTCCCTACCCGACCTCCTGTAT-----C 861
consensus_10071#2 CAAGTTCCTCCCTGAAAGTCT----AAGATACGTCCCTACCCGACCTCCTGTAT-----C 860
consensus_10071#1 CAAAGTCCATATTACATCTCTCCAGAACCCAAGTTCCTCTCTGAAAGTCTGTATTTTATC 946
*** *** * * *** ** * ** *** * ** ****** *
consensus_10071#0 CTTGGGTTGAAGCCCAAGCT-CACCCAAGGATAAGTTCATTGTACGTCCTATTTTGTCTC 920
consensus_10071#2 CTTGGGTTGAAGCCCAAGCT-CACCCAAGGATAAGTTCATTGTACGTCCTATTTTGTCTC 919
consensus_10071#1 CCTCCTCCAAACTTCGGGCAGTACCCATCAGTAGTCTTCATCT-CACCCAAGTCCAATAT 1005
* * ** * ** ***** ** * * * * ** * *
consensus_10071#0 ATTGTCAGGTGGGACCCAGTGGACCCCGTGAGGAATATTCCTTCGGAATATTCTTTTCCA 980
consensus_10071#2 ATT---TGGGCTACCCTTGTAATATTAATATACAG--TTTAACCGGTATAACGATGTC-- 972
consensus_10071#1 ATC----CCTCCCATTTAGAGGATCNNCCGGGGTTATTTCTTCCAACATAAAGGAACTCA 1061
** * ** * ***
consensus_10071#0 GTGAGGGAAATCATCCTTTTCCTCGGTTTATAAATCCTTTTTAAACTTCGGAAATCCATA 1040
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 TTTGGG-----TATCCTTTTCCTCGATTTATAAATCATCT--AATCTTCGAGAATTCATA 1114
consensus_10071#0 TCTTCCAAACCGTGACTCCGATTGATTCCGTTCAACTTCCGGAATTTTTCTAAAATCAGG 1100
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 TCTTGCAAACTGTGACTCCGATTGATTCCATTCAACTTCCGAAACTCTTCTAAAATCGAG 1174
consensus_10071#0 ATCTATCCAATGACACTTCTGGTTTGAATTGATTGGTACTTTATTTGGAGCATGTTATAT 1160
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 ATCTATCCAATGACACTGCTGGTTTGAATTGATTGGTACTTTATTTGGAGGTTGGTATAT 1234
consensus_10071#0 GGTTTTCTCGTGCTAACCGCGTATCGGGTATTCCGGCTATTCGTCGACCGTGGTTTTCTC 1220
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 GGNTTTCTCGTGCTAACCACGTATCGAGTATTCCGGATATTCGNCGATCGNGGATTTCTC 1294
consensus_10071#0 GAAGATATCGGTTTCTAAAAGCAAGAGAAGAGTTGGAGTCGACTGTTCGGAAATAATGCT 1280
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 GAAGATACCGGGTTCTAAAAGCAAGGCAAGTCACTACGCTCCCCCTNCTTGAGCA----T 1350
consensus_10071#0 GATGAACAGATGTCGAAGATGGTGGAGTCGGGACCTAGGTTCACCAGTCGATGCCTGTGG 1340
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 ATTGAACCCAGGTTATAAACGGTTTGGTTATAAATAAAGGT----GCATGCTAATTATAA 1406
consensus_10071#0 AGTACGATGGACCACCGCTGCTTCGCTTCCGCCATCTCATCTACTTCTTCTGGTATTTTG 1400
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 AATG-GNGNGCCTAAATTGNATGNGAACCATCCTTGANATTGGTACCTTTATATATCCCT 1465
consensus_10071#0 TAATGTACCTGTCCATGCTAG--GTCTATTTGGGTCTCATTTGGGCTACCCTTGTAATAT 1458
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 TGGTGCCTGAGTCAAAAGCGGCCGCGAATTCGCGGCCGCTAGCGGC-------------- 1511
consensus_10071#0 TAATATACAGTTTAACCGGTATAACGATGTCAGCTTGAGATATTCAACTGTGCCATGTGT 1518
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 ------------------------------------------------------------
consensus_10071#0 GTACCATCTACTGATCCAGGGAATGGTATTGTAAGACACATGGGGATTCCGGTGTATAAA 1578
consensus_10071#2 ------------------------------------------------------------
consensus_10071#1 ------------------------------------------------------------
consensus_10071#0 ACCGGGGGCCCACAG 1593
consensus_10071#2 ---------------
consensus_10071#1 ---------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||