cluster # 10078

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Oryza sativa
cluster # 10078 cluster # 10078 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10078#0 length = 1068 sequences # 7
consensusID : consensus_10078#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1068
fasta sequence
                              [TTTTTGTTTTTTTTTTTGACGTATCAATCCATTACATTACATTGCCCTTTTCACATCATTACAATTTCAGGCTCAGCTCAGACATTCAGTAGAACAAAATTTTTCCTAATAATGCAGCTTTCTTGTTATTGTTTTATTATTAGACATGTTATGGAAGAGAAAAAACTCACAACCGAGAAACACAAGCAAATAAACCATACACCAAAATAGGTTGGCACCCACAAAGCACACACATATATCTAGCTTTGGTAATATTTATAAGCGGATCAATTTCTTCCGTGGCCAAGCTGCTGCAGGAGTTGTCCATGCCCCCTCCCATTAGCGTTTCCATGATCGTTGTCCGATATCTTAAGCTTGCGAACGACTTCATGCATGTGTACCTCCTGATGCATATGATTCATCTTCTGATGCACCTCCACGCCGTGATACTCAATTGATGTCCCTCCCTTGTGCTTTTGCTCGAGATCCTTAATTTTTCGCTGCAATTTCTTGTTCTCCTCCTCGAGACGCCTGTTCTCTTTCCTCTTTGTGTCTACCTTTAAATTGAGATTTTCTTTGTCTCTCTTCAATCTTTTCTGCTCTTCCTCGGCAGCTGTTTTGTCGGCCTGGAGAACCTTTTTTTCTTCCCTTTTTTCCCTTAGTTTTATGTCTAGATCTTCCTTCTGTCTCTTCATTCTTTCAAGGTCTTTCTTGTATCTCTCTATTTCTTCCTTTACATCATCCGGAATAACCGATTCAATCTTGACACTGGATGCCATCTTCTTGAGGCGTTCGTACAGCTTCCCCACATCCACAGTCCCTCGCACCTCCACCTTCAAACTGCTGCTCTCTGGATTTTTGCTGTAGTTTCTATACTCGATAGATTCTTTGAATTCTTGACGAAGTACATTCTTGACCTCAGTCTCGCTTGCACCCCGAACCTTTAGCTTCACTTGTTTCTTGTCACCCATTTTGCTTCAGCTATGGAATGAAACAAAAACGAGAAGGAAGTCGGAGACAAGTGCAAGATCGAGCTAGCTAGTTCTGCTTCAAGCACAACATCGCCATGTGTTCTGAACTTAAATACGG]

[+] EMBL CF319984             [TTTTTGTTTTTTTTTTTGACGTATCAATCCATTACATTACATTGCCCTTTTCACATCATTACAATTTCAGGCTCAGCTCAGACATTCAGTAGAACAAAACGGTTCCTAATAATGCAGCTTTCTTGTTATTGTTTTATTATTAGACATGTTATGGAAGAGAAAAAACTCACAACCGAGAAACACAAGCAAATAAACCATACACCAAAATAGGTTGGCACCCACAAAGCACACACATATATCTAGCTTTGGTAATATTTATAAGCGGATCAATTTCTTCCGTGGCCAAGCTGCTGCAGGAGTTGTCCATGCCCCCTCCCATTAGCGTTTCCATGATCGTTGTCCGATATCTTAAGCTTGCGAACGACTTCATGCATGTGTACCTCCTGATGCATATGATTCATCTTCTGATGCACCTCCACGCCGTGATACTCAATTGATGTCCCTCCCTTGTGCTTTTGCTCGAGATCCTTAATTTTTCGCTGCAATTTCTTGTTCTCCTCCTCGAGACGCCTGTTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF318755             [                                                                                                   TTTTTCCTAATAATGCAGCTTTCTTGTTATTGTTTTATTATTAGACATGTTATGGAAGAGAAAAAACTCACAACCGAGAAACACAAGCAAATAAACCATACACCAAAATAGGTTGGCACCCACAAAGCACACACATATATCTAGCTTTGGTAATATTTATAAGCGGATCAATTTCTTCCGTGGCCAAGCTGCTGCAGGAGTTGTCCATGCCCCCTCCCATTAGCGTTTCCATGATCGTTGTCCGATATCTTAAGCTTGCGAACGACTTCATGCATGTGTACCTCCTGATGCATATGATTCATCTTCTGATGCACCTCCACGCCGTGATACTCAATTGATGTCCCTCCCTTGTGCTTTTGCTCGAGATCCTTAATTTTTCGCTGCAATTTCTTGTTCTCCTCCTCGAGACGCCTGTTCTCTTTCCTCTTTGTGTCTACCTTTAAATTGAGATTTTCTTTGTCTCTCTTCAATCTTTTCTGCTCTTCCTCGGCAGCTGTTTTGTCGGCCTGGAGAACCTTTTTTTCTTCCCTTTTTTCCCTTAGTTTTATGTCTAGATCTTCCTTCTGTCT                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AU166333             [                                                                                                 ttTTTTTCCTAATAATGCAGCTTTCTTGTTATTGTTTTATTATTAGACATGTTATGGAAGAGAAAAAACTCACAACCGAGAAACACAAGCAAATAAACCATACACCAAAATAGGTTGGCACCCACAAAGCACACACATATATCTAGCTTTGGTAATATTTATAAGCGGATCAATTTCTTCCGTGGCCAAGCTGCTGCAGGAGTTGTCCATGCCCCCTCCCATTAGCGTTTCCATGATCGTTGTCCGATATCTTAAGCTTGCGAACGACTTCATGCATGTGTACCTCCTGATGCATATGATTCATCTTCTGATGCACCTCCACGCCGTGATACTCAATTGATGTCCCTCCCTTGTGCTTTTGCTCGAGATCCTTAATTTTTCGCTGCAATTTCTTGTTCTCCTCCTCGAGACGCCTGTTCTCTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CF319983             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTCGAGACGCCTGTTCTCTTTCCTCTTTGTGTCTACCTTTAAATTGAGATTTTCTTTGTCTCTCTTCAATCTTTTCTGCTCTTCCTCGGCAGCTGTTTTGTCGGCCTGGAGAACCTTTTTTTCTTCCCTTTTTTCCCTTAGTTTTATGTCTAGATCTTCCTTCTGTCTCTTCATTCTTTCAAGGTCTTTCTTGTATCTCTCTATTTCTTCCTTTACATCATCCGGAATAA CGATTCAATCTTGACACTGGATGCCATCTTCTTGAGGCGTTCGTACAGCTTCCCCACATCCACAGTCCCTCGCACCTCCACCTTCAAACTGCTGCTCTCTGGATTTTTGCTGTAGTTTCTATACTCGATAGATTCTTTGAATTCTTGACGAAGTACATTCTTGACCTCAGTCTCGCTTGCACCCCGAACCTTTAGCTTCACTTGTTTCTTGTCACCCATTTTGCTTCAGCTATGGAATGAAACAAAAACGAGAAGGAAGTCGGAGACAAGTGCAAGATCGAGCTAGCTAG                                               ]
[-] EMBL CF318754             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTGTGTCTACCTTTAAATTGAGATTTTCTTTGTCTCTCTTCAATCTTTTCTGCTCTTCCTCGGCAGCTGTTTTGTCGGCCTGGAGAACCTTTTTTTCTTCCCTTTTTTCCCTTAGTTTTATGTCTAGATCTTCCTTCTGTCTCTTCATTCTTTCAAGGTCTTTCTTGTATCTCTCTATTTCTTCCTTTACATCATCCGGAATAACCGATTCAATCTTGACACTGGATGCCATCTTCTTGAGGCGTTCGTACAGCTTCCCCACATCCACAGTCCCTCGCACCTCCACCTTCAAACTGCTGCTCTCTGGATTTTTGCTGTAGTTTCTATACTCGATAGATTCTTTGAATTCTTGACGAAGTACATTCTTGACCTCAGTCTCGCTTGCACCCCGAACCTTTAGCTTCACTTGTTTCTTGTCACCCATTTTGCTTCAGCTATGGAATGAATCAAAAACGAGAAGGAAGTCGGAGACAAGTGCAAGATCGAGCTAGCTAGTTCTGCTTCAAGCACAACATCGCCATGTGTTCTGAACTTAAATACGG]
[-] EMBL AK062765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TATGTCTAGATCTTCCTTCTGTCTCTTCATTCTTTCAAGGTCTTTCTTGTATCTCTCTATTTCTTCCTTTACATCATCCGGAATAACCGATTCAATCTTGACACTGGATGCCATCTTCTTGAGGCGTTCGTACAGCTTCCCCACATCCACAGTCCCTCGCACCTCCACCTTCAAACTGCTGCTCTCTGGATTTTTGCTGTAGTTTCTATACTCGATAGATTCTTTGAATTCTTGACGAAGTACATTCTTGACCTCAGTCTCGCTTGCACCCCGAACCTTTAGCTTCACTTGTTTCTTGTCACCCATTTTGCTTCAGCTATGGAATGAAACAAAAACGAGAAGGAAGTCGGAGACAAGTGCAAGATCGAGCTAGCTAG                                               ]
[-] EMBL OSC111461            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTCAAGGTCTTTCTTGTATCTCTCTATTTCTTCCTTTACATCATCCGGAATAACCGATTCAATCTTGACACTGGATGCCATCTTCTTGAGGCGTTCGTACAGCTTCCCCACATCCACAGTCCCTCGCACCTCCACCTTCAAACTGCTGCTCTCTGGATTTTTGCTGTAGTTTCTATACTCGATAGATTCTTTGAATTCTTGACGAAGTACATTCTTGACCTCAGTCTCGCTTGCACCCCGAACCTTTAGCTTCACTTGTTTCTTGTCACCCATTTTGCTTCAGCTATGGAATGAAACAAAAACGAGAAGGAAGTCGGcgg                                                                       ]




>consensus_10078#0
TTTTTGTTTTTTTTTTTGACGTATCAATCCATTACATTACATTGCCCTTTTCACATCATT
ACAATTTCAGGCTCAGCTCAGACATTCAGTAGAACAAAATTTTTCCTAATAATGCAGCTT
TCTTGTTATTGTTTTATTATTAGACATGTTATGGAAGAGAAAAAACTCACAACCGAGAAA
CACAAGCAAATAAACCATACACCAAAATAGGTTGGCACCCACAAAGCACACACATATATC
TAGCTTTGGTAATATTTATAAGCGGATCAATTTCTTCCGTGGCCAAGCTGCTGCAGGAGT
TGTCCATGCCCCCTCCCATTAGCGTTTCCATGATCGTTGTCCGATATCTTAAGCTTGCGA
ACGACTTCATGCATGTGTACCTCCTGATGCATATGATTCATCTTCTGATGCACCTCCACG
CCGTGATACTCAATTGATGTCCCTCCCTTGTGCTTTTGCTCGAGATCCTTAATTTTTCGC
TGCAATTTCTTGTTCTCCTCCTCGAGACGCCTGTTCTCTTTCCTCTTTGTGTCTACCTTT
AAATTGAGATTTTCTTTGTCTCTCTTCAATCTTTTCTGCTCTTCCTCGGCAGCTGTTTTG
TCGGCCTGGAGAACCTTTTTTTCTTCCCTTTTTTCCCTTAGTTTTATGTCTAGATCTTCC
TTCTGTCTCTTCATTCTTTCAAGGTCTTTCTTGTATCTCTCTATTTCTTCCTTTACATCA
TCCGGAATAACCGATTCAATCTTGACACTGGATGCCATCTTCTTGAGGCGTTCGTACAGC
TTCCCCACATCCACAGTCCCTCGCACCTCCACCTTCAAACTGCTGCTCTCTGGATTTTTG
CTGTAGTTTCTATACTCGATAGATTCTTTGAATTCTTGACGAAGTACATTCTTGACCTCA
GTCTCGCTTGCACCCCGAACCTTTAGCTTCACTTGTTTCTTGTCACCCATTTTGCTTCAG
CTATGGAATGAAACAAAAACGAGAAGGAAGTCGGAGACAAGTGCAAGATCGAGCTAGCTA
GTTCTGCTTCAAGCACAACATCGCCATGTGTTCTGAACTTAAATACGG
clustalw multiple alignements is not computed in this case