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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10079#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2168 fasta sequence
[AAATCGTCCAAATTTTGCCTGTTGATCTGGTTCTGTAGCGAGGATTTCGTCTGTGGCGTGCTTCACATGAAAGAGAGTAGAATTGGCTGAATTATGAGGATTACATGGCAAAAGGGAGAAAAATAATCTATTGCTTTGAAAATATTGATACTCTGATCTTTTACAAGTGAAGTAAACCTGCGTTGCAGAGTACAATTGTGTTCCTTAAGCATATTTCTTTTTGCCAAGCAAAGAAATTCGACATTTCTATCTTCATGGAAGATTGGCTCGATACTAGTTTCCTCTATTGAGTTTTATTTCTCCAAATTCCAAGGTTTCAGCTTCCTTGACGTGCTTAGTTCCATCTGCAGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATATGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGGTTGGTAGGTCACTTGAGTATCAGGTCCATTTTTCTAGAATGTAAAACCATCTGCTGTGGGTCCAACGCATGATAATCCTTCATTTCGATTATGCTCTTGGGAGAGTAAATAATAAATTAACGGATTAGCAGATGCAATTTAAATAAGATATTAGAATTATGCGCTGATGGAAAGATTCATAAGAACTGGTTTTTGACAAGATTAAGCTGATGACTTTTCATACACATATTACATATATGTTCCTTAATTTGACCATGTGCGTATTTTTCTAACATGCAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCT-ATTAGCTAAGCTTAGCAAAAGAGG-AAAAAAAAGGCCTTTTTTGCCAAAAAAAAA]
[+] EMBL AK072416 [AAATCGTCCAAATTTTGCCTGTTGATCTGGTTCTGTAGCGAGGATTTCGTCTGTGGCGTGCTTCACATGAAAGAGAGTAGAATTGGCTGAATTATGAGGATTACATGGCAAAAGGGAGAAAAATAATCTATTGCTTTGAAAATATTGATACTCTGATCTTTTACAAGTGAAGTAAACCTGCGTTGCAGAGTACAATTGTGTTCCTTAAGCATATTTCTTTTTGCCAAGCAAAGAAATTCGACATTTCTATCTTCATGGAAGATTGGCTCGATACTAGTTTCCTCTATTGAGTTTTATTTCTCCAAATTCCAAGGTTTCAGCTTCCTTGACGTGCTTAGTTCCATCTGCAGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATATGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGGTTGGTAGGTCACTTGAGTATCAGGTCCATTTTTCTAGAATGTAAAACCATCTGCTGTGGGTCCAACGCATGATAATCCTTCATTTCGATTATGCTCTTGGGAGAGTAAATAATAAATTAACGGATTAGCAGATGCAATTTAAATAAGATATTAGAATTATGCGCTGATGGAAAGATTCATAAGAACTGGTTTTTGACAAGATTAAGCTGATGACTTTTCATACACATATTACATATATGTTCCTTAATTTGACCATGTGCGTATTTTTCTAACATGCAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCT ATTAGCTAAGCTTAGCAAAAGAGG AAAAAAAAGGCCTT ]
[-] EMBL CF327520 [ ATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTCATTAGCTAAGCTTAGCAAAAGAGGCAAAAAAAAGGCCCTTTTTGCCAAAAAAAAA]
consensusID : consensus_10079#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1915 fasta sequence
[ACTTTGGCGGCTTTTCGAGGGGGGGAGGGGAGGAGGGGCAATACCCCGGCCGGTTTTACTCCTGCCGATCGAGTCGAGGGGAGCGCGGGTCCGCCGCTTTTCGGCCTCCCTCCCATTGGAGCGAGCAAAGCTGGGCGGCACCATCTCTCTTTAAAGAAGAACCAAACAACAACACTAGCACCACCACCACCACCACCTCCACCACCATCAGTGTCCATCAACCACCCACCGCGCTCACCGTCACACCCCGCTCGCCCGCGCGCGCGCGCGCGCACACACACGAGGGACCGATCGATCGATCGCTCCAGGCGATCGAGTCGCACTGAAGCTGCTTGAAGAGCTTGGCGATCTCTCGCTCCCTGCAGATTAGATCGGTTTCAACCCGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATCTGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTTTTGCCCG]
[+] EMBL CB674870 [ACTTTGGCGGCTTTTCGAGGGGGGGAGGGGAGGAGGGGCAATACCCCGGCCGGTTTTACTCCTGCCGATCGAGTCGAGGGGAGCGCGGGTCCGCCGCTTTTCGGCCTCCCTCCCATTGGAGCGAGCAAAGCTGGGCGGCACCATCTCTCTTTAAAGAAGAACCAAACAACAACACTAGCACCACCACCACCACCACCTCCACCACCATCAGTGTCCATCAACCACCCACCGCGCTCACCGTCACACCCCGCTCGCCCGCGCGCGCGCGCGCGCACACACACGAGGGACCGATCGATCGATCGCTCCAGGCGATCGAGTCGCACTGAAGCTGCTTGAAGAGCTTGGCGATCTCTCGCTCCCTGCAGATTAGATCGGTTTCAACCCGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTT ]
[+] EMBL AK119597 [ ACCACCTCCACCACCATCAGTGTCCATCAACCACCCACCGCGCTCACCGTCACACCCCGCTCGCCCCCGCGCGCGCGCGCGCACACACACGAGGGACCGATCGATCGATCGCTCCAGGCGATCGAGTCGCACTGAAGCTGCTTGAAGAGCTTGGCGATCTCTCGCTCCCTGCAGATTAGATCGGTTTCAACCCGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATCTGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTTTT ]
[+] EMBL CF327519 [ GTTCCAGTGGTATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATGCGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGGTGGCCTCCAGAAATATGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGG ]
[-] EMBL CB674871 [ AGTTCAGACGGACACAAGAGTTCTTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAAATGAGCAAAAGAGGAAAAAAAAGGCCTTTTTGCCCG]
consensusID : consensus_10079#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 729 fasta sequence
[TCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGNTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTT]
[+] EMBL CA767142 [TCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGNTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10079#1 ACTTTGGCGGCTTTTCGAGGGGGGGAGGGGAGGAGGGGCAATACCCCGGCCGGTTTTACT 60
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 ------------------------------------------AAATCGTCCAAATTT-TG 17
consensus_10079#1 CCTGCCGATCGAGTCGAGGGGAGCGCGGGTCCGCCGCTTTTCGGCCTCCCTCCCATTGGA 120
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 CCTGTTGATCTGGTTCTGT--AGCGAGGATTT--CG-TCTGTGGCGTGCTTCACATGAAA 72
consensus_10079#1 GCGAGCAAAGCTGGGCGG--CACCATCTCTCTTTAAAGAAGAACCAAACAACAA-CACTA 177
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 GAGAGTAGAATTGGCTGAATTATGAGGATTACATGGCAAAAGGGAGAAAAATAATCTATT 132
consensus_10079#1 GCACCACCACCACCACCACCTCCACCACCATCAGTGTCCATCAACCACCCACCGC-GCTC 236
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 GCTTTGAAAATATTGATACTCTGATCTTTTACAA-GTGAAGTAAACCTGCGTTGCAGAGT 191
consensus_10079#1 ACCGTCACACCCCGCTCGCCCGCGCGCGCGCGCGCGCACACACACGAGGGACCGATCGAT 296
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 ACAATTGTGTTCCTTAAGCATATTTCTTTTTGC-----CAAGCAAAGAAATTCGACATTT 246
consensus_10079#1 CGATCGCTCCAGGCGATCGAGTCG-CACTGAAGCTGCTTGAAGAGCTTGGCGATCTCTCG 355
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 CTATCTTCATGGAAGATTGGCTCGATACTAGTTTCCTCTATTGAGTTTTATTTCTCCAAA 306
consensus_10079#1 CTCC----CTGCAGATTA--------GATCGGTTTCAAC--CCGGGAACAATATATTGTG 401
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 TTCCAAGGTTTCAGCTTCCTTGACGTGCTTAGTTCCATCTGCAGGGAACAATATATTGTG 366
consensus_10079#1 GAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGA 461
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 GAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGA 426
consensus_10079#1 GCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGT 521
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 GCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGT 486
consensus_10079#1 GCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGAT 581
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 GCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGAT 546
consensus_10079#1 GGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGT 641
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 GGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGT 606
consensus_10079#1 TGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGA 701
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 TGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGA 666
consensus_10079#1 CTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGT 761
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 CTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGT 726
consensus_10079#1 CTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCC 821
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 CTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCC 786
consensus_10079#1 CCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATC 881
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 CCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATA 846
consensus_10079#1 TGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGAC 941
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 TGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGAC 906
consensus_10079#1 TGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCG 1001
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 TGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCG 966
consensus_10079#1 GAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGA 1061
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 GAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGA 1026
consensus_10079#1 GCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGT 1121
consensus_10079#2 ------------------------------TCAGACGGACACAAGAGTTCCTTCGTTTGT 30
consensus_10079#0 GCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGT 1086
******************************
consensus_10079#1 GTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAG------------------- 1162
consensus_10079#2 GTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAG------------------- 71
consensus_10079#0 GTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGGTTGGTAGGTCACTTGAGT 1146
*****************************************
consensus_10079#1 ------------------------------------------------------------
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 ATCAGGTCCATTTTTCTAGAATGTAAAACCATCTGCTGTGGGTCCAACGCATGATAATCC 1206
consensus_10079#1 ------------------------------------------------------------
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 TTCATTTCGATTATGCTCTTGGGAGAGTAAATAATAAATTAACGGATTAGCAGATGCAAT 1266
consensus_10079#1 ------------------------------------------------------------
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 TTAAATAAGATATTAGAATTATGCGCTGATGGAAAGATTCATAAGAACTGGTTTTTGACA 1326
consensus_10079#1 ------------------------------------------------------------
consensus_10079#2 ------------------------------------------------------------
consensus_10079#0 AGATTAAGCTGATGACTTTTCATACACATATTACATATATGTTCCTTAATTTGACCATGT 1386
consensus_10079#1 ---------------------CCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTAC 1201
consensus_10079#2 ---------------------CCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTAC 110
consensus_10079#0 GCGTATTTTTCTAACATGCAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTAC 1446
***************************************
consensus_10079#1 AAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACA 1261
consensus_10079#2 AAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACA 170
consensus_10079#0 AAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACA 1506
************************************************************
consensus_10079#1 ATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACC 1321
consensus_10079#2 ATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACC 230
consensus_10079#0 ATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACC 1566
************************************************************
consensus_10079#1 AAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTG 1381
consensus_10079#2 AAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTG 290
consensus_10079#0 AAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTG 1626
************************************************************
consensus_10079#1 CTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGG 1441
consensus_10079#2 CTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGG 350
consensus_10079#0 CTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGG 1686
************************************************************
consensus_10079#1 AGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAAC 1501
consensus_10079#2 AGGAACCAAGAGGATG-------------------------------------------- 366
consensus_10079#0 AGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAAC 1746
****************
consensus_10079#1 TCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATG 1561
consensus_10079#2 --------------------------------------------ATGGTGATGACTGATG 382
consensus_10079#0 TCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATG 1806
****************
consensus_10079#1 AGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAAC 1621
consensus_10079#2 AGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAAC 442
consensus_10079#0 AGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAAC 1866
************************************************************
consensus_10079#1 CAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGAC 1681
consensus_10079#2 CAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGAC 502
consensus_10079#0 CAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGAC 1926
************************************************************
consensus_10079#1 AAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCT 1741
consensus_10079#2 AAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCT 562
consensus_10079#0 AAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCT 1986
************************************************************
consensus_10079#1 TGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCT 1801
consensus_10079#2 TGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCT 622
consensus_10079#0 TGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCT 2046
************************************************************
consensus_10079#1 CAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCT 1861
consensus_10079#2 CAGTATAGTGAATAGAGGATGTAGAATAGGAAGNTAGTTAATAATAAGTACTAGCTAGCT 682
consensus_10079#0 CAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCT 2106
********************************* **************************
consensus_10079#1 AGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTTTTGCCCG------ 1915
consensus_10079#2 AGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTT------------- 729
consensus_10079#0 AGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTTTTTGCCAAAAAAA 2166
***********************************************
consensus_10079#1 --
consensus_10079#2 --
consensus_10079#0 AA 2168
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||