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Oryza sativa
cluster # 10080 cluster # 10080       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10080#0 length = 2065 sequences # 6  
consensus_10080#1 length = 407 sequences # 1  

consensusID : consensus_10080#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2065
fasta sequence
                              [TCAACTTGCAACTCTTCATTCCAGTTCGCTTCCTCCCTCCCACCTCTTCTCCACTTCTTCTTCCTCCTCCCCTTTCACACTCCACTTCTTTGGTCTGCTCTTCTTGGTATCCTTCTCCTACGCATAGTTAAGCTCCGAGCTCAGGAGGTAGGTTGGTAGGTTTCTATTGCTTCTTCTCAGCTGGGAGAGTGAAAATACCGAGGAGAAAAGGCACATCAAGATTGTTTCTTTCGGTTTCTTGGGCTTCTCTTGCGGCAACATGAAGAAGCTCTTCTTCTTCCTCTTCCTGCTGATACTGGCCGCCTCGGTTGTTCACGGCGAGGACGGGGCGTACATCGGCGTCAACATTGGCACGGCCATGACGTCGGTACCGGCGCCGACACAGATCACGACGCTGCTCCGCTCGCAGAACATCCGCCACGTGCGGCTGTACGACGCCGACCCGGCGATGCTCGCGGCGCTCGCCAACACCGGCATCCGCGTCATCGTCTCCGTGCCGAACGAGCAGCTCCTCGCCATCGGCAACTCCAACGCCACGGCGGCCAACTGGGTGGCGCGCAACGTGGCCGCGCACTACCCTTCCGTGAACATCACGGCCATCGCGGTCGGCTCCGAGGTGCTCTCCACGCTGCCCAACGCGGCGCCGCTCCTCATGCCGGCCATCCGCTACCTCCAGAACGCGCTGGTGGCCGCGGCGCTCGACCGGTACATCAAGATCTCGACGCCGCACTCCTCGTCCATCATCCTCGACTCGTTCCCGCCGTCGCAGGCCTTCTTCAACCGCTCCCTGGACCCGGTGCTGGTGCCGCTGCTCAAGTTCTTGCAGTCCACGGGCTCGCCGCTGATGCTCAACGTGTACCCGTACTACGACTACATGCGCTCCAACGGCGTCATCCCGCTGGACTACGCGCTGTTCCGGCCGCTGCCGCCGAACAAGGAGGCGGTGGACGCCAACACCCTGCTGCACTACACCAACGTGTTCGACGCGGTCGTGGACGCTGCCTACTTCGCCATGGCGTACCTCAACGTCACCAACGTGCCGGTGATGGTGACGGAGACCGGGTGGCCGCACAAGGGCGACCCGTCCAACGAGCCCGACGCCACCTCCGACAACGCCGACACCTACAACAGTAACCTCATCCGGCACGTGATGAACACCACCGGCACGCCGAAGCACCCCGGCGTCGCCGTGCCGACGTACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCGGAGAAGTACTGGGGCCTGTTCGACATGAACGGCATCCCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTGCTGCTCGCCAACGACACGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGACGAGAAGATGCTGCAGGCGGCGCTCGACTGGGCTTGCGGCCCGGGCAAGGTGGACTGCTCCGCGCTGATGCAGGGGCAGCCGTGCTACGACCCGGACAACGTCGAGGCGCACGCCACCTACGCCTTCAACGCCTACTACCATGGCATGGGCATGGGCTCCGGGACGTGCTACTTCAGCGGTGTCGCCGTGATCACCACCACCGATCCCAGCCACGGGTCTTGCGTTTACGCTGGAAGTGGTGGGAAGAACGGGACGTCGTTGCTGAACGGCACATCGCTGGCGCCGTCGTCGAACTCCACGGCGGGGGACTCCGGCGCGCACCGGGCGATCGGGGACGTCTCGTCGTTCGTCCGCGCCGTCGTCGCGGCGCTGCTGTTGAGCGTCGTCCTCCTGTTGTAGGCAGTGAGACGAGAGTGGTTAGTTTAGTAGGCAAGGCAGCAGAGTCCGTAGGAATTCATGGGGGGATTCTTTTTTTGGTGTCGAGTGGGATTGGCCTCGGTGTTATGGGTGGGTGGTGATCATTGAGAACGAACAAGATGATGTGCCTGTGTTCATCTGTTGCTCTAAGATGTTGTCTGGGAACTTGGTATTGGGTGGTACGTTGCCTGGAAAAGGAAATTGGTACTAGGTTGTATTTGCAGAAGGTGTCAGTGTTTGTGCGCTGACCACAATCAAAATCTTCTTCTGAGC]

[+] EMBL AK103138             [TCAACTTGCAACTCTTCATTCCAGTTCGCTTCCTCCCTCCCACCTCTTCTCCACTTCTTCTTCCTCCTCCCCTTTCACACTCCACTTCTTTGGTCTGCTCTTCTTGGTATCCTTCTCCTACGCATAGTTAAGCTCCGAGCTCAGGAGGTAGGTTGGTAGGTTTCTATTGCTTCTTCTCAGCTGGGAGAGTGAAAATACCGAGGAGAAAAGGCACATCAAGATTGTTTCTTTCGGTTTCTTGGGCTTCTCTTGCGGCAACATGAAGAAGCTCTTCTTCTTCCTCTTCCTGCTGATACTGGCCGCCTCGGTTGTTCACGGCGAGGACGGGGCGTACATCGGCGTCAACATTGGCACGGCCATGACGTCGGTACCGGCGCCGACACAGATCACGACGCTGCTCCGCTCGCAGAACATCCGCCACGTGCGGCTGTACGACGCCGACCCGGCGATGCTCGCGGCGCTCGCCAACACCGGCATCCGCGTCATCGTCTCCGTGCCGAACGAGCAGCTCCTCGCCATCGGCAACTCCAACGCCACGGCGGCCAACTGGGTGGCGCGCAACGTGGCCGCGCACTACCCTTCCGTGAACATCACGGCCATCGCGGTCGGCTCCGAGGTGCTCTCCACGCTGCCCAACGCGGCGCCGCTCCTCATGCCGGCCATCCGCTACCTCCAGAACGCGCTGGTGGCCGCGGCGCTCGACCGGTACATCAAGATCTCGACGCCGCACTCCTCGTCCATCATCCTCGACTCGTTCCCGCCGTCGCAGGCCTTCTTCAACCGCTCCCTGGACCCGGTGCTGGTGCCGCTGCTCAAGTTCTTGCAGTCCACGGGCTCGCCGCTGATGCTCAACGTGTACCCGTACTACGACTACATGCGCTCCAACGGCGTCATCCCGCTGGACTACGCGCTGTTCCGGCCGCTGCCGCCGAACAAGGAGGCGGTGGACGCCAACACCCTGCTGCACTACACCAACGTGTTCGACGCGGTCGTGGACGCTGCCTACTTCGCCATGGCGTACCTCAACGTCACCAACGTGCCGGTGATGGTGACGGAGACCGGGTGGCCGCACAAGGGCGACCCGTCCAACGAGCCCGACGCCACCTCCGACAACGCCGACACCTACAACAGTAACCTCATCCGGCACGTGATGAACACCACGGGCACGCCGAAGCACCCCGGCGTCGCCGTGCCGACGTACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCGGAGAAGTACTGGGGCCTGTTCGACATGAACGGCATCCCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTGCTGCTCGCCAACGACACGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGACGAGAAGATGCTGCAGGCGGCGCTCGACTGGGCTTGCGGCCCGGGCAAGGTGGACTGCTCCGCGCTGATGCAGGGGCAGCCGTGCTACGACCCGGACAACGTCGAGGCGCACGCCACCTACGCCTTCAACGCCTACTACCATGGCATGGGCATGGGCTCCGGGACGTGCTACTTCAGCGGTGTCGCCGTGATCACCACCACCGATCCCAGCCACGGGTCTTGCGTTTACGCTGGAAGTGGTGGGAAGAACGGGACGTCGTTGCTGAACGGCACATCGCTGGCGCCGTCGTCGAACTCCACGGCGGGGGACTCCGGCGCGCACCGGGCGATCGGGGACGTCTCGTCGTTCGTCCGCGCCGTCGTCGCGGCGCTGCTGTTGAGCGTCGTCCTCCTGTTGTAGGCAGTGAGACGAGAGTGGTTAGTTTAGTAGGCAAGGCAGCAGAGTCCGTAGGAATTCATGGGGGGATTCTTTTTTTGGTGTCGAGTGGGATTGGCCTCGGTGTTATGGGTGGGTGGTGATCATTGAGAACGAACAAGATGATGTGCCTGTGTTCATCTGTTGCTCTAAGATGTTGTCTGGGAACTTGGTATTGGGTGGTACGTTGCCTGGAAAAGGAAATTGGTACTAGGTTGTATTTGCAGAAGGTGTCAGTGTTTGTGCGCTGACCACAATCAAAATCTT         ]
[+] EMBL AK119620             [                          CGCTTCCTCCCTCCCACCTCTTCTCCACTTCTTCTTCCTCCTCCCCTTTCACACTCCACTTCTTTGGTCTGCTCTTCTTGGTATCCTTCTCCTACGCATAGTTAAGCTCCGAGCTCAGGAGGTAGGTTGGTAGGTTTCTATTGCTTCTTCTCAGCTGGGAGAGTGAAAATACCGAGGAGAAAAGGCACATCAAGATTGTTTCTTTCGGTTTCTTGGGCTTCTCTTGCGGCAACATGAAGAAGCTCTTCTTCTTCCTCTTCCTGCTGATACTGGCCGCCTCGGTTGTTCACGGCGAGGACGGGGCGTACATCGGCGTCAACATTGGCACGGCCATGACGTCGGTACCGGCGCCGACACAGATCACGACGCTGCTCCGCTCGCAGAACATCCGCCACGTGCGGCTGTACGACGCCGACCCGGCGATGCTCGCGGCGCTCGCCAACACCGGCATCCGCGTCATCGTCTCCGTGCCGAACGAGCAGCTCCTCGCCATCGGCAACTCCAACGCCACGGCGGCCAACTGGGTGGCGCGCAACGTGGCCGCGCACTACCCTTCCGTGAACATCACGGCCATCGCGGTCGGCTCCGAGGTGCTCTCCACGCTGCCCAACGCGGCGCCGCTCCTCATGCCGGCCATCCGCTACCTCCAGAACGCGCTGGTGGCCGCGGCGCTCGACCGGTACATCAAGATCTCGACGCCGCACTCCTCGTCCATCATCCTCGACTCGTTCCCGCCGTCGCAGGCCTTCTTCAACCGCTCCCTGGACCCGGTGCTGGTGCCGCTGCTCAAGTTCTTGCAGTCCACGGGCTCGCCGCTGATGCTCAACGTGTACCCGTACTACGACTACATGCGCTCCAACGGCGTCATCCCGCTGGACTACGCGCTGTTCCGGCCGCTGCCGCCGAACAAGGAGGCGGTGGACGCCAACACCCTGCTGCACTACACCAACGTGTTCGACGCGGTCGTGGACGCTGCCTACTTCGCCATGGCGTACCTCAACGTCACCAACGTGCCGGTGATGGTGACGGAGACCGGGTGGCCGCACAAGGGCGACCCGTCCAACGAGCCCGACGCCACCTCCGACAACGCCGACACCTACAACAGTAACCTCATCCGGCACGTGATGAACACCACCGGCACGCCGAAGCACCCCGGCGTCGCCGTGCCGACGTACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCGGAGAAGTACTGGGGCCTGTTCGACATGAACGGCATCCCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTGCTGCTCGCCAACGACACGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGACGAGAAGATGCTGCAGGCGGCGCTCGACTGGGCTTGCGGCCCGGGCAAGGTGGACTGCTCCGCGCTGATGCAGGGGCAGCCGTGCTACGACCCGGACAACGTCGAGGCGCACGCCACCTACGCCTTCAACGCCTACTACCATGGCATGGGCATGGGCTCCGGGACGTGCTACTTCAGCGGTGTCGCCGTGATCACCACCACCGATCCCAGCCACGGGTCTTGCGTTTACGCTGGAAGTGGTGGGAAGAACGGGACGTCGTTGCTGAACGGCACATCGCTGGCGCCGTCGTCGAACTCCACGGCGGGGGACTCCGGCGCGCACCGGGCGATCGGGGACGTCTCGTCGTTCGTCCGCGCCGTCGTCGCGGCGCTGCTGTTGAGCGTCGTCCTCCTGTTGTAGGCAGTGAGACGAGAGTGGTTAGTTTAGTAGGCAAGGCAGCAGAGTCCGTAGGAATTCATGGGGGGATTCTTTTTTTGGTGTCGAGTGGGATTGGCCTCGGTGTTATGGGTGGGTGGTGATCATTGAGAACGAACAAGATGATGTGCCTGTGTTCATCTGTTGCTCTAAGATGTTGTCTGGGAACTTGGTATTGGGTGGTACGTTGCCTGGAAAAGGAAATTGGTACTAGGTTGTATTTGCAGAAGGTGTCAGTGTTTGTGCGCTGACCACAATCAAAATCTT         ]
[+] EMBL C91833               [                                            TCTTCTCCACTTCTTCTTCCTCCTCCCCTTTCACACTCCACTTCTTTGGTCTGCTCTTCTTGGTATCCTTCTCCTACGCATAGTTAAGCTCCGAGCTCAGGAGGTAGGTTGGTAGGTTTCTATTGCTTCTTCTCAGCTGGGAGAGTGAAAATACCGAGGAGAAAAGGCACATCAAGATTGTTTCTTTCGGTTTCTTGGGCTTCTCTTGCGGCAACATGAAGAAGCTCTTCTTCTTCCTCTTCCTGCTGATACTGGCCGCCTCGGCTTTTTACGGCGAGGACGGGGCGTACATCGGCGTCAACATTGGCACGGCCATGACGTCGGTANCGGCGCCGACACAGATCACGACGCTGCTCCGCTCGCAGAACATCCGCCANGTGCGGCTGTACGACGCCGA CCGGNGATGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK109516             [                                                                                                                                                                                                                                                      CTCTTGCGGCAACATGAAGAAGCTCTTCTTCTTCCTCTTCCTGCTGATACTGGCCGCCTCGGTTGTTCACGGCGAGGACGGGGCGTACATCGGCGTCAACATTGGCACGGCCATGACGTCGGTACCGGCGCCGACACAGATCACGACGCTGCTCCGCTCGCAGAACATCCGCCACGTGCGGCTGTACGACGCCGACCCGGCGATGCTCGCGGCGCTCGCCAACACCGGCATCCGCGTCATCGTCTCCGTGCCGAACGAGCAGCTCCTCGCCATCGGCAACTCCAACGCCACGGCGGCCAACTGGGTGGCGCGCAACGTGGCCGCGCACTACCCTTCCGTGAACATCACGGCCATCGCGGTCGGCTCCGAGGTGCTCTCCACGCTGCCCAACGCGGCGCCGCTCCTCATGCCGGCCATCCGCTACCTCCAGAACGCGCTGGTGGCCGCGGCGCTCGACCGGTACATCAAGATCTCGACGCCGCACTCCTCGTCCATCATCCTCGACTCGTTCCCGCCGTCGCAGGCCTTCTTCAACCGCTCCCTGGACCCGGTGCTGGTGCCGCTGCTCAAGTTCTTGCAGTCCACGGGCTCGCCGCTGATGCTCAACGTGTACCCGTACTACGACTACATGCGCTCCAACGGCGTCATCCCGCTGGACTACGCGCTGTTCCGGCCGCTGCCGCCGAACAAGGAGGCGGTGGACGCCAACACCCTGCTGCACTACACCAACGTGTTCGACGCGGTCGTGGACGCTGCCTACTTCGCCATGGCGTACCTCAACGTCACCAACGTGCCGGTGATGGTGACGGAGACCGGGTGGCCGCACAAGGGCGACCCGTCCAACGAGCCCGACGCCACCTCCGACAACGCCGACACCTACAACAGTAACCTCATCCGGCACGTGTTGAACACCACCGGCACGCCGAAGCACCCCGGCGTCGCCGTGCCGACGTACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCGGAGAAGTACTGGGGCCTGTTCGACATGAACGGCATCCCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTGCTGCTCGCCAACGACACGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGTCGAGAAGATGCTGCAGGCGGCGCTCGACTGGGCTTGCGGCCCGGGCAAGGTGGACTGCTCCGCGCTGATGCAGGGGCAGCCGTGCTACGACCCGGACAACGTCGAGGCGCACGCCACCTACGCCTTCAACGCCTACTACCATGGCATGGGCATGGGCTCCGGGACGTGCTACTTCAGCGGTGTCGCCGTGATCACCACCACCGATCCCAGCCACGGGTCTTGCGTTTACGCTGGAAGTGGTGGGAAGAACGGGACGTCGTTGCTGAACGGCACATCGCTGGCGCCGTCGTCGAACTCCACGGCGGGGGACTCCGGCGCGCACCGGGCGATCGGGGACGTCTCGTCGTTCGTCCGCGCCGTCGTCGCGGCGCTGCTGTTGAGCGTCGTCCTCCTGTTGTAGGCAGTGAGACGAGAGTGGTTAGTTTAGTAGGCAAGGCAGCAGAGTCCGTAGGAATTCATGGGGGGATTCTTTTTTTGGTGTCGAGTGGGATTGGCCTCGGTGTTATGGGTGGGTGGTGATCATTGAGAACGAACAAGATGATGTGCCTGCGTTCATCTGTTGCTCTAAGATGTTGTCTGGGAACTTGGTATTGGGTGGTACGTTGCCTGGAAAAGGAAATTGGTACTAGGTTGTATTTGCAGAAGGTGTCAGTGTTTGTGCGCTGACCACAATCAAAATCTTCTTCTGAGC]
[+] EMBL AY217745             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AACGGCGTCATCCCGCTGGACTACGCGCTGTTCCGGCCGCTGCCGCCGAACAAGGAGGCGGTGGACGCCAACACCCTGCTGCACTACACCAACGTGTTCGACGCGGTCGTGGACGCTGCCTACTTCGCCATGGCGTACCTCAACGTCACCAACGTGCCGGTGATGGTGACGGAGACCGGGTGGCCGCACAAGGGCGACCCGTCCAACGAGCCCGACGCCACCTCCGACAACGCCGACACCTACAACAGTAACCTCATCCGGCACGTGATGAACACCACCGGCACGCCGAAGCACCCCGGCGTCGCCGTGCCGACGTACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCGGAGAAGTACTGGGGCCTGTTCGACATGAACGGCATCCCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTGCTGCTCGCCAACGACACGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGACGAGAAGATGCTGCAGGCGGCGCTCGACTGGGCTTGCGGCCCGGGCAAGGTGGACTGCTCCGCGCTGATGCAGGGGCAGCCGTGCTACGACCCGGACAACGTCGAGGCGCACGCCACCTACGCCTTCAACGCCTACTACCATGGCATGGGCATGGGCTCCGGGACGTGCTACTTCAGCGGTGTCGCCGTGATCACCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA998079             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGCACCCCGGCGTCGCCGTGCCGACGTACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCGGAGAAGTACTGGGGCCTGTTCGACATGAACGGCATCCCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTGCTGCTCGCCAACGACACGACGAACCAGACCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_10080#0 TCAACTTGCAACTCTTCATTCCAGTTCGCTTCCTCCCTCCCACCTCTTCTCCACTTCTTC TTCCTCCTCCCCTTTCACACTCCACTTCTTTGGTCTGCTCTTCTTGGTATCCTTCTCCTA CGCATAGTTAAGCTCCGAGCTCAGGAGGTAGGTTGGTAGGTTTCTATTGCTTCTTCTCAG CTGGGAGAGTGAAAATACCGAGGAGAAAAGGCACATCAAGATTGTTTCTTTCGGTTTCTT GGGCTTCTCTTGCGGCAACATGAAGAAGCTCTTCTTCTTCCTCTTCCTGCTGATACTGGC CGCCTCGGTTGTTCACGGCGAGGACGGGGCGTACATCGGCGTCAACATTGGCACGGCCAT GACGTCGGTACCGGCGCCGACACAGATCACGACGCTGCTCCGCTCGCAGAACATCCGCCA CGTGCGGCTGTACGACGCCGACCCGGCGATGCTCGCGGCGCTCGCCAACACCGGCATCCG CGTCATCGTCTCCGTGCCGAACGAGCAGCTCCTCGCCATCGGCAACTCCAACGCCACGGC GGCCAACTGGGTGGCGCGCAACGTGGCCGCGCACTACCCTTCCGTGAACATCACGGCCAT CGCGGTCGGCTCCGAGGTGCTCTCCACGCTGCCCAACGCGGCGCCGCTCCTCATGCCGGC CATCCGCTACCTCCAGAACGCGCTGGTGGCCGCGGCGCTCGACCGGTACATCAAGATCTC GACGCCGCACTCCTCGTCCATCATCCTCGACTCGTTCCCGCCGTCGCAGGCCTTCTTCAA CCGCTCCCTGGACCCGGTGCTGGTGCCGCTGCTCAAGTTCTTGCAGTCCACGGGCTCGCC GCTGATGCTCAACGTGTACCCGTACTACGACTACATGCGCTCCAACGGCGTCATCCCGCT GGACTACGCGCTGTTCCGGCCGCTGCCGCCGAACAAGGAGGCGGTGGACGCCAACACCCT GCTGCACTACACCAACGTGTTCGACGCGGTCGTGGACGCTGCCTACTTCGCCATGGCGTA CCTCAACGTCACCAACGTGCCGGTGATGGTGACGGAGACCGGGTGGCCGCACAAGGGCGA CCCGTCCAACGAGCCCGACGCCACCTCCGACAACGCCGACACCTACAACAGTAACCTCAT CCGGCACGTGATGAACACCACCGGCACGCCGAAGCACCCCGGCGTCGCCGTGCCGACGTA CATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCGGAGAAGTACTGGGG CCTGTTCGACATGAACGGCATCCCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTGCT GCTCGCCAACGACACGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGACGAGAA GATGCTGCAGGCGGCGCTCGACTGGGCTTGCGGCCCGGGCAAGGTGGACTGCTCCGCGCT GATGCAGGGGCAGCCGTGCTACGACCCGGACAACGTCGAGGCGCACGCCACCTACGCCTT CAACGCCTACTACCATGGCATGGGCATGGGCTCCGGGACGTGCTACTTCAGCGGTGTCGC CGTGATCACCACCACCGATCCCAGCCACGGGTCTTGCGTTTACGCTGGAAGTGGTGGGAA GAACGGGACGTCGTTGCTGAACGGCACATCGCTGGCGCCGTCGTCGAACTCCACGGCGGG GGACTCCGGCGCGCACCGGGCGATCGGGGACGTCTCGTCGTTCGTCCGCGCCGTCGTCGC GGCGCTGCTGTTGAGCGTCGTCCTCCTGTTGTAGGCAGTGAGACGAGAGTGGTTAGTTTA GTAGGCAAGGCAGCAGAGTCCGTAGGAATTCATGGGGGGATTCTTTTTTTGGTGTCGAGT GGGATTGGCCTCGGTGTTATGGGTGGGTGGTGATCATTGAGAACGAACAAGATGATGTGC CTGTGTTCATCTGTTGCTCTAAGATGTTGTCTGGGAACTTGGTATTGGGTGGTACGTTGC CTGGAAAAGGAAATTGGTACTAGGTTGTATTTGCAGAAGGTGTCAGTGTTTGTGCGCTGA CCACAATCAAAATCTTCTTCTGAGC



consensusID : consensus_10080#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 407
fasta sequence
                              [CAAAAACCCCCCGGCGTAAAAAGCGCCGACGTACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCAGAGAAGTACTGGGGCCTGTTCGACATGAACGGAATACCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTTCTTTTTGCCAACGACTCGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGACTACAAAATGCTGCAGGCGGCGCTCCACTGGGCTTGCGAGCCCGGGAAACGTGGACTGCTCNCGCCCTGAATGAAGGGCAACCGATCCTAGAACCCGGACAACTTCAAGGGCCAACCCCCCTCACCCTTTAAACCCCTACTTAACATGGGCAGGCGCCAATGGGCTCCGGATCAGGGCTAATCCCCAGGGGTTGCGCTGG]

[+] EMBL BU099207             [CAAAAACCCCCCGGCGTAAAAAGCGCCGACGTACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCAGAGAAGTACTGGGGCCTGTTCGACATGAACGGAATACCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTTCTTTTTGCCAACGACTCGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGACTACAAAATGCTGCAGGCGGCGCTCCACTGGGCTTGCGAGCCCGGGAAACGTGGACTGCTCNCGCCCTGAATGAAGGGCAACCGATCCTAGAACCCGGACAACTTCAAGGGCCAACCCCCCTCACCCTTTAAACCCCTACTTAACATGGGCAGGCGCCAATGGGCTCCGGATCAGGGCTAATCCCCAGGGGTTGCGCTGG]


>consensus_10080#1 CAAAAACCCCCCGGCGTAAAAAGCGCCGACGTACATCTACGAGCTCTACGACGAGGACAC CCGCCCCGGCTCGACGTCAGAGAAGTACTGGGGCCTGTTCGACATGAACGGAATACCGGC GTACACCCTGCACCTGACAGGCTCCGGCGTTCTTTTTGCCAACGACTCGACGAACCAGAC CTACTGCGTGGCGCGGGAGGGCGCTGACTACAAAATGCTGCAGGCGGCGCTCCACTGGGC TTGCGAGCCCGGGAAACGTGGACTGCTCNCGCCCTGAATGAAGGGCAACCGATCCTAGAA CCCGGACAACTTCAAGGGCCAACCCCCCTCACCCTTTAAACCCCTACTTAACATGGGCAG GCGCCAATGGGCTCCGGATCAGGGCTAATCCCCAGGGGTTGCGCTGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10080#0      TCAACTTGCAACTCTTCATTCCAGTTCGCTTCCTCCCTCCCACCTCTTCTCCACTTCTTC 60
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      TTCCTCCTCCCCTTTCACACTCCACTTCTTTGGTCTGCTCTTCTTGGTATCCTTCTCCTA 120
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CGCATAGTTAAGCTCCGAGCTCAGGAGGTAGGTTGGTAGGTTTCTATTGCTTCTTCTCAG 180
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CTGGGAGAGTGAAAATACCGAGGAGAAAAGGCACATCAAGATTGTTTCTTTCGGTTTCTT 240
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GGGCTTCTCTTGCGGCAACATGAAGAAGCTCTTCTTCTTCCTCTTCCTGCTGATACTGGC 300
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CGCCTCGGTTGTTCACGGCGAGGACGGGGCGTACATCGGCGTCAACATTGGCACGGCCAT 360
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GACGTCGGTACCGGCGCCGACACAGATCACGACGCTGCTCCGCTCGCAGAACATCCGCCA 420
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CGTGCGGCTGTACGACGCCGACCCGGCGATGCTCGCGGCGCTCGCCAACACCGGCATCCG 480
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CGTCATCGTCTCCGTGCCGAACGAGCAGCTCCTCGCCATCGGCAACTCCAACGCCACGGC 540
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GGCCAACTGGGTGGCGCGCAACGTGGCCGCGCACTACCCTTCCGTGAACATCACGGCCAT 600
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CGCGGTCGGCTCCGAGGTGCTCTCCACGCTGCCCAACGCGGCGCCGCTCCTCATGCCGGC 660
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CATCCGCTACCTCCAGAACGCGCTGGTGGCCGCGGCGCTCGACCGGTACATCAAGATCTC 720
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GACGCCGCACTCCTCGTCCATCATCCTCGACTCGTTCCCGCCGTCGCAGGCCTTCTTCAA 780
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CCGCTCCCTGGACCCGGTGCTGGTGCCGCTGCTCAAGTTCTTGCAGTCCACGGGCTCGCC 840
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GCTGATGCTCAACGTGTACCCGTACTACGACTACATGCGCTCCAACGGCGTCATCCCGCT 900
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GGACTACGCGCTGTTCCGGCCGCTGCCGCCGAACAAGGAGGCGGTGGACGCCAACACCCT 960
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GCTGCACTACACCAACGTGTTCGACGCGGTCGTGGACGCTGCCTACTTCGCCATGGCGTA 1020
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CCTCAACGTCACCAACGTGCCGGTGATGGTGACGGAGACCGGGTGGCCGCACAAGGGCGA 1080
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CCCGTCCAACGAGCCCGACGCCACCTCCGACAACGCCGACACCTACAACAGTAACCTCAT 1140
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CCGGCACGTGATGAACACCACCGGCACGCCGAAGCACCCCGGCGTCGCC-GTGCCGACGT 1199
consensus_10080#1      ----------------------------CAAAAACCCCCCGGCGTAAAAAGCGCCGACGT 32
                                                   *  ** * *********     * ********

consensus_10080#0      ACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCGGAGAAGTACTGGG 1259
consensus_10080#1      ACATCTACGAGCTCTACGACGAGGACACCCGCCCCGGCTCGACGTCAGAGAAGTACTGGG 92
                       ********************************************** *************

consensus_10080#0      GCCTGTTCGACATGAACGGCATCCCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTGC 1319
consensus_10080#1      GCCTGTTCGACATGAACGGAATACCGGCGTACACCCTGCACCTGACAGGCTCCGGCGTTC 152
                       ******************* ** *********************************** *

consensus_10080#0      TGCTCGCCAACGACACGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGACGAGA 1379
consensus_10080#1      TTTTTGCCAACGACTCGACGAACCAGACCTACTGCGTGGCGCGGGAGGGCGCTGACTACA 212
                       *  * ********* ***************************************** * *

consensus_10080#0      AGATGCTGCAGGCGGCGCTCGACTGGGCTTGCG-GCCCGGGCAAGGTGGACTGCTCC-GC 1437
consensus_10080#1      AAATGCTGCAGGCGGCGCTCCACTGGGCTTGCGAGCCCGGGAAACGTGGACTGCTCNCGC 272
                       * ****************** ************ ******* ** ***********  **

consensus_10080#0      GCTGATGCAGGGGCAGCCG-TGCTACGACCCGGACAACGTCGAGGCGCACGCCACCT-AC 1495
consensus_10080#1      CCTGAATGAAGGGCAACCGATCCTAGAACCCGGACAACTTCAAGGGCCAACCCCCCTCAC 332
                        ****   * ***** *** * ***  *********** ** ***  **  ** *** **

consensus_10080#0      GCCTTCAACGCCTACT-ACCATGG-CATGGGC--ATGGGCTCCGGGAC-GTGCTACTTCA 1550
consensus_10080#1      CCTTTAAACCCCTACTTAACATGGGCAGGCGCCAATGGGCTCCGGATCAGGGCTAATCCC 392
                        * ** *** ****** * ***** ** * **  ***********  * * **** * * 

consensus_10080#0      GCGGTGTCGCCGTGATCACCACCACCGATCCCAGCCACGGGTCTTGCGTTTACGCTGGAA 1610
consensus_10080#1      CAGGGGTTGCGCTGG--------------------------------------------- 407
                         ** ** **  **                                              

consensus_10080#0      GTGGTGGGAAGAACGGGACGTCGTTGCTGAACGGCACATCGCTGGCGCCGTCGTCGAACT 1670
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CCACGGCGGGGGACTCCGGCGCGCACCGGGCGATCGGGGACGTCTCGTCGTTCGTCCGCG 1730
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      CCGTCGTCGCGGCGCTGCTGTTGAGCGTCGTCCTCCTGTTGTAGGCAGTGAGACGAGAGT 1790
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GGTTAGTTTAGTAGGCAAGGCAGCAGAGTCCGTAGGAATTCATGGGGGGATTCTTTTTTT 1850
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GGTGTCGAGTGGGATTGGCCTCGGTGTTATGGGTGGGTGGTGATCATTGAGAACGAACAA 1910
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GATGATGTGCCTGTGTTCATCTGTTGCTCTAAGATGTTGTCTGGGAACTTGGTATTGGGT 1970
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      GGTACGTTGCCTGGAAAAGGAAATTGGTACTAGGTTGTATTTGCAGAAGGTGTCAGTGTT 2030
consensus_10080#1      ------------------------------------------------------------
                                                                                   

consensus_10080#0      TGTGCGCTGACCACAATCAAAATCTTCTTCTGAGC 2065
consensus_10080#1      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)