cluster # 10088

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Oryza sativa
cluster # 10088 cluster # 10088 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10088#0 length = 1807 sequences # 6

consensus_10088#1 length = 467 sequences # 1

consensusID : consensus_10088#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1807
fasta sequence

                              [GAGCATTCCACCGTGCGCGAAAGCGCCCCGTCACCATGCGCCTCCAACTCTGCTTCCTCTGCTTCGGCTTGCTTCTCGTCTCCTCCTCGCTGCAATGCCACGGGCTGCTTCTGCCGCTCACCAACACCCTCTCCTCGCTCCGCCCAGCCAATGACACCGCCACCATCCACCGCCTCCTCCGCTCCTCCTCCCTCCGTTCCGCCGCGCGCCACCGCGGCCGCCGCCACGGCACGCGCCGCGCGCCTCCTCCTCCACGGCACCGCCAGCTCTCGCTGCCGCTCGCGCCGGGGAGCGACTACACGCTGTCGCTCTCGGTCGGCCCGCCTTCCACGGCCAGCTCCGTGTCGCTCTTCCTCGACACCGGCAGCGACCTCGTCTGGTTCCCCTGCGCGCCGTTCACCTGCATGCTCTGCGAAGGCAAGGCGACGCCTGGTGGCAACCACTCCAGCCCGCTCCCCCCACCGATCGACTCCCGCCGCATCTCCTGCGCGTCGCCGCTCTGCTCCGCGGCGCACTCCTCCGCGCCCACCTCCGACCTGTGCGCCGCGGCGCGGTGCCCGCTCGACGCGATCGAGACCGACTCGTGCGCGTCCCACGCGTGCCCGCCGCTGTACTACGCGTACGGGGACGGCAGCCTCGTCGCGAACCTGAGGCGCGGACGCGTCGGGCTGGCCGCGTCCATGGCCGTGGAGAACTTCACCTTCGCCTGCGCGCACACGGCGCTCGCCGAGCCCGTCGGGGTGGCCGGGTTCGGGCGCGGCCCGCTCTCGCTCCCGGCCCAGCTCGCCCCGTCGCTCTCCGGCAGGTTTTCCTACTGCCTCGTCGCCCACTCATTCCGCGCCGACCGGCTCATCCGGTCAAGCCCGCTGATCCTCGGCCGCAGCACGGACGCCGCCGCGATCGGCGCCTCCGAGACGGACTTCGTGTACACGCCGCTGCTGCACAACCCGAAGCACCCCTACTTCTACTCGGTGGCGCTCGAAGCCGTCTCGGTGGGCGGGAAGAGGATACAGGCCCAGCCCGAGCTCGGGGACGTGGACCGCGACGGCAACGGCGGGATGGTGGTGGACTCGGGCACGACGTTCACCATGCTGCCGAGCGACACGTTCGCGCGGGTGGCCGACGAGTTCGCGCGCGCGAT-GGCCGCGGCGCGG-TTCACGCGCGCCGAGGGCGCGGAGGCCCAGACAGGGCTCGCCCCCTGCTACCACTACTCCCCGTCGGACCGCGCCGTGCCGCCGGTGGCGCTCCACTTCCGTGGCAACGCGACGGTGGCGCTGCCGCGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGCGGAGCGTCGGGTGCCTGATGCTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACGGTGGTGGTCCGGCAGGGACGCTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTGTACGACGTGGACGCCGGTCGCGTCGGCTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACGCTCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAGCTCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGTTCTTCTTGCGACGTTACTGTTTTGTTTCTCGTGTTTCTGCTTGTAAATCTGTCTTGCTCTGCCCGTATGGAACCTGATTAACGATTAACCGATGGCAACGACTCGGACGGCGAGACATGTCTCCACACGGGTTTTTGCTACCAACAGAGAAACTGCAGTAAACAAACTCGAACCTTTGGCACATTTGA]

[+] EMBL AK101505             [GAGCATTCCACCGTGCGCGAAAGCGCCCCGTCACCATGCGCCTCCAACTCTGCTTCCTCTGCTTCGGCTTGCTTCTCGTCTCCTCCTCGCTGCAATGCCACGGGCTGCTTCTGCCGCTCACCAACACCCTCTCCTCGCTCCGCCCAGCCAATGACACAGCCACCATCCACCGCCTCCTCCGCTCCTCCTCCCTCCGTTCCGCCGCGCGCCACCGCGGCCGCCGCCACGGCACGCGCCGCGCGCCTCCTCCTCCACGGCACCGCCAGCTCTCGCTGCCGCTCGCGCCGGGGAGCGACTACACGCTGTCGCTCTCGGTCGGCCCGCCTTCCACGGCCAGCTCCGTGTCGCTCTTCCTCGACACCGGCAGCGACCTCGTCTGGTTCCCCTGCGCGCCGTTCACCTGCATGCTCTGCGAAGGCAAGGCGACGCCTGGTGGCAACCACTCCAGCCCGCTCCCCCCACCGATCGACTCCCGCCGCATCTCCTGCGCGTCGCCGCTCTGCTCCGCGGCGCACTCCTCCGCGCCCACCTCCGACCTGTGCGCCGCGGCGCGGTGCCCGCTCGACGCGATCGAGACCGACTCGTGCGCGTCCCACGCGTGCCCGCCGCTGTACTACGCGTACGGGGACGGCAGCCTCGTCGCGAACCTGAGGCGCGGACGCGTCGGGCTGGCCGCGTCCATGGCCGTGGAGAACTTCACCTTCGCCTGCGCGCACACGGCGCTCGCCGAGCCCGTCGGGGTGGCCGGGTTCGGGCGCGGCCCGCTCTCGCTCCCGGCCCAGCTCGCCCCGTCGCTCTCCGGCAGGTTTTCCTACTGCCTCGTCGCCCACTCATTCCGCGCCGACCGGCTCATCCGGTCAAGCCCGCTGATCCTCGGCCGCAGCACGGACGCCGCCGCGATCGGCGCCTCCGAGACGGACTTCGTGTACACGCCGCTGCTGCACAACCCGAAGCACCCCTACTTCTACTCGGTGGCGCTCGAAGCCGTCTCGGTGGGCGGGAAGAGGATACAGGCCCAGCCCGAGCTCGGGGACGTGGACCGCGACGGCAACGGCGGGATGGTGGTGGACTCGGGCACGACGTTCACCATGCTGCCGAGCGACACGTTCGCGCGGGTGGCCGACGAGTTCGCGCGCGCGAT GGCCGCGGCGCGG TTCACGCGCGCCGAGGGCGCGGAGGCCCAGACAGGGCTCGCCCCCTGCTACCACTACTCCCCGTCGGACCGCGCCGTGCCGCCGGTGGCGCTCCACTTCCGTGGCAACGCGACGGTGGCGCTGCCGCGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGCGGAGCGTCGGGTGCCTGATGCTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACGGTGGTGGTCCGGCAGGGACGCTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTGTACGACGTGGACGCCGGTCGCGTCGGCTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACGCTCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAGCTCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGTTCTTCTTGCGACGTTACTGTTTTGTTTCTCGTGTTTCTGCTTGTAAATCTGTCTTGCTCTGCCCGTATGGAACCTGATTAACGATTAACCGATGGCAACGACTCGGACGGCGAGACATGTCTCCACACGGGTTTTTGCTACCAACAGAGAAACTGCAGTAAACAAACTCG                  ]
[+] EMBL AK060585             [ AGCATTCCACCGTGCGCGAAAGCGCCCCGTCACCATGCGCCTCCAACTCTGCTTCCTCTGCTTCGGCTTGCTTCTCGTCTCCTCCTCGCTGCAATGCCACGGGCTGCTTCTGCCGCTCACCAACACCCTCTCCTCGCTCCGCCCAGCCAATGACACCGCCACCATCCACCGCCTCCTCCGCTCCTCCTCCCTCCGTTCCGCCGCGCGCCACCGCGGCCGCCGCCACGGCACGCGCCGCGCGCCTCCTCCTCCACGGCACCGCCAGCTCTCGCTGCCGCTCGCGCCGGGGAGCGACTACACGCTGTCGCTCTCGGTCGGCCCGCCTTCCACGGCCAGCTCCGTGTCGCTCTTCCTCGACACCGGCAGCGACCTCGTCTGGTTCCCCTGCGCGCCGTTCACCTGCATGCTCTGCGAAGGCAAGGCGACGCCTGGTGGCAACCACTCCAGCCCGCTCCCCCCACCGATCGACTCCCGCCGCATCTCCTGCGCGTCGCCGCTCTGCTCCGCGGCGCACTCCTCCGCGCCCACCTCCGACCTGTGCGCCGCGGCGCGGTGCCCGCTCGACGCGATCGAGACCGACTCGTGCGCGTCCCACGCGTGCCCGCCGCTGTACTACGCGTACGGGGACGGCAGCCTCGTCGCGAACCTGAGGCGCGGACGCGTCGGGCTGGCCGCGTCCATGGCCGTGGAGAACTTCACCTTCGCCTGCGCGCACACGGCGCTCGCCGAGCCCGTCGGGGTGGCCGGGTTCGGGCGCGGCCCGCTCTCGCTCCCGGCCCAGCTCGCCCCGTCGCTCTCCGGCAGGTTTTCCTACTGCCTCGTCGCCCACTCATTCCGCGCCGACCGGCTCATCCGGTCAAGCCCGCTGATCCTCGGCCGCAGCACGGACGCCGCCGCGATCGGCGCCTCCGAGACGGACTTCGTGTACACGCCGCTGCTGCACAACCCGAAGCACCCCTACTTCTACTCGGTGGCGCTCGAAGCCGTCTCGGTGGGCGGGAAGAGGATACAGGCCCAGCCCGAGCTCGGGGACGTGGACCGCGACGGCAACGGCGGGATGGTGGTGGACTCGGGCACGACGTTCACCATGCTGCCGAGCGACACGTTCGCGCGGGTGGCCGACGAGTTCGCGCGCGCGAT GGCCGCGGCGCGG TTCACGCGCGCCGAGGGCGCGGAGGCCCAGACAGGGCTCGCCCCCTGCTACCACTACTCCCCGTCGGACCGCGCCGTGCCGCCGGTGGCGCTCCACTTCCGTGGCAACGCGACGGTGGCGCTGCCGCGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGCGGAGCGTCGGGTGCCTGATGCTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACGGTGGTGGTCCGGCAGGGACGCTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTGTACGACGTGGACGCCGGTCGCGTCGGCTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACGCTCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAGCTCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGTTCTTCTTGCGACGTTACTGTTTTGTTTCTCGTGTTTCTGCTTGTAAATCTGTCTTGCTCTGCCCGTATGGAACCTGATTAA                                                                                                           ]
[+] EMBL AK119767             [   CATTCCACCGTGCGCGAAAGCGCCCCGTCACCATGCGCCTCCAACTCTGCTTCCTCTGCTTCGGCTTGCTTCTCGTCTCCTCCTCGCTGCAATGCCACGGGCTGCTTCTGCCGCTCACCAACACCCTCTCCTCGCTCCGCCCAGCCAATGACACCGCCACCATCCACCGCCTCCTCCGCTCCTCCTCCCTCCGTTCCGCCGCGCGCCACCGCGGCCGCCGCCACGGCACGCGCCGCGCGCCTCCTCCTCCACGGCACCGCCAGCTCTCGCTGCCGCTCGCGCCGGGGAGCGACTACACGCTGTCGCTCTCGGTCGGCCCGCCTTCCACGGCCAGCTCCGTGTCGCTCTTCCTCGACACCGGCAGCGACCTCGTCTGGTTCCCCTGCGCGCCGTTCACCTGCATGCTCTGCGAAGGCAAGGCGACGCCTGGTGGCAACCACTCCAGCCCGCTCCCCCCACCGATCGACTCCCGCCGCATCTCCTGCGCGTCGCCGCTCTGCTCCGCGGCGCACTCCTCCGCGCCCACCTCCGACCTGTGCGCCGCGGCGCGGTGCCCGCTCGACGCGATCGAGACCGACTCGTGCGCGTCCCACGCGTGCCCGCCGCTGTACTACGCGTACGGGGACGGCAGCCTCGTCGCGAACCTGAGGCGCGGACGCGTCGGGCTGGCCGCGTCCATGGCCGTGGAGAACTTCACCTTCGCCTGCGCGCACACGGCGCTCGCCGAGCCCGTCGGGGTGGCCGGGTTCGGGCGCGGCCCGCTCTCGCTCCCGGCCCAGCTCGCCCCGTCGCTCTCCGGCAGGTTTTCCTACTGCCTCGTCGCCCACTCATTCCGCGCCGACCGGCTCATCCGGTCAAGCCCGCTGATCCTCGGCCGCAGCACGGACGCCGCCGCGATCGGCGCCTCCGAGACGGACTTCGTGTACACGCCGCTGCTGCACAACCCGAAGCACCCCTACTTCTACTCGGTGGCGCTCGAAGCCGTCTCGGTGGGCGGGAAGAGGATACAGGCCCAGCCCGAGCTCGGGGACGTGGACCGCGACGGCAACGGCGGGATGGTGGTGGACTCGGGCACGACGTTCACCATGCTGCCGAGCGACACGTTCGCGCGGGTGGCCGACGAGTTCGCGCGCGCGAT GGCCGCGGCGCGG TTCACGCGCGCCGAGGGCGCGGAGGCCCAGACAGGGCTCGCCCCCTGCTACCACTACTCCCCGTCGGACCGCGCCGTGCCGCCGGTGGCGCTCCACTTCCGTGGCAACGCGACGGTGGCGCTGCCGCGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGCGGAGCGTCGGGTGCCTGATGCTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACGGTGGTGGTCCGGCAGGGACGCTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTGTACGACGTGGACGCCGGTCGCGTCGGCTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACGCTCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAGCTCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGTTCTTCTTGCGACGTTACTGTTTTGTTTCTCGTGTTTCTGCTTGTAAATCTGTCTTGCTCTGCCCGTATGGAACCTGATTAACGATTAACCGATGGCAACGACTCGGACGGCGAGACATGTCTCCACACGGGTTTTTGCTACCAACAGAGAAACTGCAGTAAACAAACTCGAACCTTTGGCACATTTGA]
[+] EMBL AU068297             [                                                                                                                                                                                                                                      ACGCGCCGCGCGCCTCCTCCTCCACGGCACCGCCAGCTCTCGCTGCCGCTCGCGCCGGGGAGCGACTACACGCTGTCGCTCTCGGTCGGCCCGCCTTCCACGGCCAGCTCCGTGTCGCTCTTCCTCGACACCGGCAGCGACCTCGTCTGGTTCCCCTGCGCGCCGTTCACCTGCATGCTCTGCGAAGGCAAGGCGACGCCTGGTGGCAACCACTCCAGCCCGCTCCCCCCACCGATCGACTCCCGCCGCATCTCCTGCGCGTCGCCGCTCTGCTCCGCGGCGCACTCCTCCGCGCCCACCTCCGACCTGTGCGCCGCGGCGCGGTGCCCGCTCGACGCGATCGAGACCGACTCGTGCGCGTCCCACGCGTGCCCGCCGCTGTACTACGCGTACGGGGACGGCAGCCTCGTCGCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C74684               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGTACACNCCGCTGCTGCACAACCCGAAGCACCCCTACTTCTACTCGGTGGCGCTCGAAGCCGTCTCGGTGGGCGGGAAGAGGATACAGGCCCAGCCCGAGCTCGGGGACGTGGACCGCGACGGCAACGGCGGGATNGTGGTGGACTCGGGCACGACGTTCACCATGCTGCCGAGCGACACGTTCGCGCGGGTNGCCGACGAGTTCGCGCGCGCGATNNGCCGCGGCGCGGTTTCACGC NGCCGAGGGCNGGAAGGCCCAGACANGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB659043             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGCAGCAGGGGTTCGACGTGGTGTACGATGTGGACGCCGGTCGCGTCGGCTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACGCTCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAGCTCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGTTCTTCTAGAGGGGTTACTGTTTTGTTTCTC                                                                                                                                                              ]




>consensus_10088#0
GAGCATTCCACCGTGCGCGAAAGCGCCCCGTCACCATGCGCCTCCAACTCTGCTTCCTCT
GCTTCGGCTTGCTTCTCGTCTCCTCCTCGCTGCAATGCCACGGGCTGCTTCTGCCGCTCA
CCAACACCCTCTCCTCGCTCCGCCCAGCCAATGACACCGCCACCATCCACCGCCTCCTCC
GCTCCTCCTCCCTCCGTTCCGCCGCGCGCCACCGCGGCCGCCGCCACGGCACGCGCCGCG
CGCCTCCTCCTCCACGGCACCGCCAGCTCTCGCTGCCGCTCGCGCCGGGGAGCGACTACA
CGCTGTCGCTCTCGGTCGGCCCGCCTTCCACGGCCAGCTCCGTGTCGCTCTTCCTCGACA
CCGGCAGCGACCTCGTCTGGTTCCCCTGCGCGCCGTTCACCTGCATGCTCTGCGAAGGCA
AGGCGACGCCTGGTGGCAACCACTCCAGCCCGCTCCCCCCACCGATCGACTCCCGCCGCA
TCTCCTGCGCGTCGCCGCTCTGCTCCGCGGCGCACTCCTCCGCGCCCACCTCCGACCTGT
GCGCCGCGGCGCGGTGCCCGCTCGACGCGATCGAGACCGACTCGTGCGCGTCCCACGCGT
GCCCGCCGCTGTACTACGCGTACGGGGACGGCAGCCTCGTCGCGAACCTGAGGCGCGGAC
GCGTCGGGCTGGCCGCGTCCATGGCCGTGGAGAACTTCACCTTCGCCTGCGCGCACACGG
CGCTCGCCGAGCCCGTCGGGGTGGCCGGGTTCGGGCGCGGCCCGCTCTCGCTCCCGGCCC
AGCTCGCCCCGTCGCTCTCCGGCAGGTTTTCCTACTGCCTCGTCGCCCACTCATTCCGCG
CCGACCGGCTCATCCGGTCAAGCCCGCTGATCCTCGGCCGCAGCACGGACGCCGCCGCGA
TCGGCGCCTCCGAGACGGACTTCGTGTACACGCCGCTGCTGCACAACCCGAAGCACCCCT
ACTTCTACTCGGTGGCGCTCGAAGCCGTCTCGGTGGGCGGGAAGAGGATACAGGCCCAGC
CCGAGCTCGGGGACGTGGACCGCGACGGCAACGGCGGGATGGTGGTGGACTCGGGCACGA
CGTTCACCATGCTGCCGAGCGACACGTTCGCGCGGGTGGCCGACGAGTTCGCGCGCGCGA
TGGCCGCGGCGCGGTTCACGCGCGCCGAGGGCGCGGAGGCCCAGACAGGGCTCGCCCCCT
GCTACCACTACTCCCCGTCGGACCGCGCCGTGCCGCCGGTGGCGCTCCACTTCCGTGGCA
ACGCGACGGTGGCGCTGCCGCGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGC
GGAGCGTCGGGTGCCTGATGCTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACG
GTGGTGGTCCGGCAGGGACGCTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTGTACG
ACGTGGACGCCGGTCGCGTCGGCTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACGC
TCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAGC
TCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGTT
CTTCTTGCGACGTTACTGTTTTGTTTCTCGTGTTTCTGCTTGTAAATCTGTCTTGCTCTG
CCCGTATGGAACCTGATTAACGATTAACCGATGGCAACGACTCGGACGGCGAGACATGTC
TCCACACGGGTTTTTGCTACCAACAGAGAAACTGCAGTAAACAAACTCGAACCTTTGGCA
CATTTGA

consensusID : consensus_10088#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 467
fasta sequence

                              [GGACCGCGCCTTGCCCCGTTGGCGCTTCACTTCCGTGGCAACGCGACGGTTGGCCTGCCCCGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGCGGAGCGTCGGGTGCCTGATGCTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACGGTGNTGGTCCGGCAGGGACNCTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTNTACGACGTGGACGCCGGTTCGCGTTCGTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACCTCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAGCTCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGTTCTTCTTGCGACGTTACTGTTTTGTTTCTCGTGTTTCTGCTTGTAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU068296             [GGACCGCGCCTTGCCCCGTTGGCGCTTCACTTCCGTGGCAACGCGACGGTTGGCCTGCCCCGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGCGGAGCGTCGGGTGCCTGATGCTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACGGTGNTGGTCCGGCAGGGACNCTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTNTACGACGTGGACGCCGGTTCGCGTTCGTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACCTCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAGCTCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGTTCTTCTTGCGACGTTACTGTTTTGTTTCTCGTGTTTCTGCTTGTAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10088#1
GGACCGCGCCTTGCCCCGTTGGCGCTTCACTTCCGTGGCAACGCGACGGTTGGCCTGCCC
CGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGCGGAGCGTCGGGTGCCTGATG
CTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACGGTGNTGGTCCGGCAGGGACN
CTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTNTACGACGTGGACGCCGGTTCGCGT
TCGTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACCTCTCGCGCCGGTGAGCTGCTG
GTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAGCTCTCAGGTGTACAGAGTACAG
ACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGTTCTTCTTGCGACGTTACTGTTT
TGTTTCTCGTGTTTCTGCTTGTAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10088#0      GAGCATTCCACCGTGCGCGAAAGCGCCCCGTCACCATGCGCCTCCAACTCTGCTTCCTCT 60
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      GCTTCGGCTTGCTTCTCGTCTCCTCCTCGCTGCAATGCCACGGGCTGCTTCTGCCGCTCA 120
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      CCAACACCCTCTCCTCGCTCCGCCCAGCCAATGACACCGCCACCATCCACCGCCTCCTCC 180
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      GCTCCTCCTCCCTCCGTTCCGCCGCGCGCCACCGCGGCCGCCGCCACGGCACGCGCCGCG 240
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      CGCCTCCTCCTCCACGGCACCGCCAGCTCTCGCTGCCGCTCGCGCCGGGGAGCGACTACA 300
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      CGCTGTCGCTCTCGGTCGGCCCGCCTTCCACGGCCAGCTCCGTGTCGCTCTTCCTCGACA 360
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      CCGGCAGCGACCTCGTCTGGTTCCCCTGCGCGCCGTTCACCTGCATGCTCTGCGAAGGCA 420
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      AGGCGACGCCTGGTGGCAACCACTCCAGCCCGCTCCCCCCACCGATCGACTCCCGCCGCA 480
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      TCTCCTGCGCGTCGCCGCTCTGCTCCGCGGCGCACTCCTCCGCGCCCACCTCCGACCTGT 540
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      GCGCCGCGGCGCGGTGCCCGCTCGACGCGATCGAGACCGACTCGTGCGCGTCCCACGCGT 600
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      GCCCGCCGCTGTACTACGCGTACGGGGACGGCAGCCTCGTCGCGAACCTGAGGCGCGGAC 660
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      GCGTCGGGCTGGCCGCGTCCATGGCCGTGGAGAACTTCACCTTCGCCTGCGCGCACACGG 720
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      CGCTCGCCGAGCCCGTCGGGGTGGCCGGGTTCGGGCGCGGCCCGCTCTCGCTCCCGGCCC 780
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      AGCTCGCCCCGTCGCTCTCCGGCAGGTTTTCCTACTGCCTCGTCGCCCACTCATTCCGCG 840
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      CCGACCGGCTCATCCGGTCAAGCCCGCTGATCCTCGGCCGCAGCACGGACGCCGCCGCGA 900
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      TCGGCGCCTCCGAGACGGACTTCGTGTACACGCCGCTGCTGCACAACCCGAAGCACCCCT 960
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      ACTTCTACTCGGTGGCGCTCGAAGCCGTCTCGGTGGGCGGGAAGAGGATACAGGCCCAGC 1020
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      CCGAGCTCGGGGACGTGGACCGCGACGGCAACGGCGGGATGGTGGTGGACTCGGGCACGA 1080
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      CGTTCACCATGCTGCCGAGCGACACGTTCGCGCGGGTGGCCGACGAGTTCGCGCGCGCGA 1140
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      TGGCCGCGGCGCGGTTCACGCGCGCCGAGGGCGCGGAGGCCCAGACAGGGCTCGCCCCCT 1200
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      GCTACCACTACTCCCCGTCGGACCGCGCCGTGCCGCCGGTGGCGCTCCACTTCCGTGGCA 1260
consensus_10088#1      -------------------GGACCGCGCCTTGCC-CCGTTGGCGCTTCACTTCCGTGGCA 40
                                          ********** **** *** ******* *************

consensus_10088#0      ACGCGACGGTGGCGCTGCCGCGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGC 1320
consensus_10088#1      ACGCGACGGTTGGCCTGCCCCGGAGGAACTACTTCATGGGGTTCAAGAGCGAGGAGGGGC 100
                       ********** *  ***** ****************************************

consensus_10088#0      GGAGCGTCGGGTGCCTGATGCTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACG 1380
consensus_10088#1      GGAGCGTCGGGTGCCTGATGCTGATGAACGTCGGCGGGAACAACGACGACGGCGAAGACG 160
                       ************************************************************

consensus_10088#0      GTGGTGGTCCGGCAGGGACGCTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTGTACG 1440
consensus_10088#1      GTGNTGGTCCGGCAGGGACNCTTGGCAACTTCCAGCAGCAGGGGTTCGAGGTGGTNTACG 220
                       *** *************** *********************************** ****

consensus_10088#0      ACGTGGACGCCGGT-CGCGTCGGCTTCGCCCGCCGCCGGTGTACGGACCTGTGGGACACG 1499
consensus_10088#1      ACGTGGACGCCGGTTCGCGTTCG-TTCGCCCGCCGCCGGTGTACGGACCTGTGGGACAC- 278
                       ************** *****  * *********************************** 

consensus_10088#0      CTCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAG 1559
consensus_10088#1      CTCTCGCGCCGGTGAGCTGCTGGTGCGGACTTACGATGATCGAGTATGATTTGTCCTAAG 338
                       ************************************************************

consensus_10088#0      CTCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGT 1619
consensus_10088#1      CTCTCAGGTGTACAGAGTACAGACTAGTGGTAGCTGCCATGCATGTATCTGTAGGATTGT 398
                       ************************************************************

consensus_10088#0      TCTTCTTGCGACGTTACTGTTTTGTTTCTCGTGTTTCTGCTTGTAAATCTGTCTTGCTCT 1679
consensus_10088#1      TCTTCTTGCGACGTTACTGTTTTGTTTCTCGTGTTTCTGCTTGTAAAAAAAAAAAAAAAA 458
                       ***********************************************             

consensus_10088#0      GCCCGTATGGAACCTGATTAACGATTAACCGATGGCAACGACTCGGACGGCGAGACATGT 1739
consensus_10088#1      AAAAAAAAA--------------------------------------------------- 467
                             *                                                     

consensus_10088#0      CTCCACACGGGTTTTTGCTACCAACAGAGAAACTGCAGTAAACAAACTCGAACCTTTGGC 1799
consensus_10088#1      ------------------------------------------------------------
                                                                                   

consensus_10088#0      ACATTTGA 1807
consensus_10088#1      --------