These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10097#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1021 fasta sequence [TCGCAACCACAGGCTAATTTAATTAGCACCAGAAATATGGCTTCTTCCAAGATGACGCTGCTCCCCGTCCTCCTCCTCCTCGCCGCGGCCTCGCCGGCGG-GC-TGGGCGCCTTCGACGTGAACCAGATGCTCGCCGACAAGTCCCAGTACGGGTCGTTCCTGAAGTTGCTGACGCAGACGAAGGTCGCGGAGGAGACGAACCGGCTCAAGTCGGCGTCGCTGCTGGTCCTCCAAGACAAGGCCATGAAGCCGATCACGTCGCTCCCCGCCGACAAGCAGCGGATGGCCATGGCCAACCACGTCCTCCTCAAGTACTTCGA-CCCCATCC-AGCTGGGCGAGATGAAGGACCGCACCGCCATGCTCCCCACGCTGCTGTCCAACACCGACAAGAAGCTCGGCGTCGTCAACTACACCAAGGCCAGCGACGGGCAGATGTACCTGGGCGCCCCCGGCGCGGCCTGCGTCGCCAAGCTCGTCAAGGTCGTCGCCGCGCGCCCCTACGCCATCTCCATCATGGAGGTCAGCGAGGCCATCCTGCCGCCCGCGCTCGGTGGCAGCGGCGGCCCCGGCCGGCGCGCCAAGGGCGGCAAGGGAAAGGTCAAGCCGAAGTCCAGCGACGCCGACGAAGCCGCGGCCAAGCCCGCCACGGAGCCAAAGGCAACCGATGTCCCTAAGTAAGCCGGTGG-CAAGGTCGACGCCGATCGACGCGCTCGTCCGTCCACGTACAAGTTTGGAATTGGATAGCGCAATAACCACGCACGGCTAGGCGTAATGTGTGACGACACGTACGGCGCATTACCAGTCTAGTATACCATCACCTTTGACCTGTACTGCTAATTTTCAGTTTAATTTGTATTCGATCAAGTACGTGAAATTGGGTCGAGTTCGATCGATCGGTTGTTTCATACGAACCGAGTTTTGTACTGCTACTAATTAATGTAATGGCTTATGGCTAATGCAAATATTTGCATGTATACGGCTGATCGATGTGCATATACTGCACATTATGTTCAAGNGAAAAA] [+] EMBL AK071402 [TCGCAACCACAGGCTAATTTAATTAGCACCAGAAATATGGCTTCTTCCAAGATGACGCTGCTCCCCGTCCTCCTCCTCCTCGCCGCGGCCTCGCCGGCGGCGC TGGGCGCCTTCGACGTGAACCAGATGCTCGCCGACAAGTCCCAGTACGGGTCGTTCCTGAAGTTGCTGACGCAGACGAAGGTCGCGGAGGAGACGAACCGGCTCAAGTCGGCGTCGCTGCTGGTCCTCCAAGACAAGGCCATGAAGCCGATCACGTCGCTCCCCGCCGACAAGCAGCGGATGGCCATGGCCAACCACGTCCTCCTCAAGTACTTCGA CCCCATCC AGCTGGGCGAGATGAAGGACCGCACCGCCATGCTCCCCACGCTGCTGTCCAACACCGACAAGAAGCTCGGCGTCGTCAACTACACCAAGGCCAGCGACGGGCAGATGTACCTGGGCGCCCCCGGCGCGGCCTGCGTCGCCAAGCTCGTCAAGGTCGTCGCCGCGCGCCCCTACGCCATCTCCATCATGGAGGTCAGCGAGGCCATCCTGCCGCCCGCGCTCGGTGGCAGCGGCGGCCCCGGCCGGCGCGCCAAGGGCGGCAAGGGAAAGGTCAAGCCGAAGTCCAGCGACGCCGACGAAGCCGCGGCCAAGCCCGCCACGGAGCCAAAGGCAACCGATGTCCCTAAGTAAGCCGGTGG CAAGGTCGACGCCGATCGACGCGCTCGTCCGTCCACGTACAAGTTTGGAATTGGATAGCGCAATAACCACGCACGGCTAGGCGTAATGTGTGACGACACGTACGGCGCATTACCAGTCTAGTATACCATCACCTTTGACCTGTACTGCTAATTTTCAGTTTAATTTGTATTCGATCAAGTACGTGAAATTGGGTCGAGTTCGATCGATCGGTTGTTTCATACGAACCGAGTTTTGTACTGCTACTAATTAATGTAATGGCTTATGGCTAATGCAAATATTTGCATGTATACGGCTGATCGATGTGCATATACTGCAC ] [+] EMBL C98818 [ AGGCTAATTTAATTAGCACCAGAAATATGGCTTCTTCCAAGATGACGCTGCTCCCCGTCCTCCTCCTCCTCGCCGCGGCCTCGCCGGCGG GCTTGGGCG CTTCGACGTGAACCAGATGCTCGCCGACAAGTCCCAGTACGGGTCGTTCCTGAAGTTGCTGACGCAGACGAAGGTCGCGGAGGAGACGAACCGGCTCAAGTCGGCGTCGCTGCTGGTCCTCCAAGACAAGGCCATGAAGCCGATCACGTCGCTCCCCGCCGACAAGCAGCGGATGGCCATGGCCAACCACGTCCTCCTCAAGTACTTCGA CNCCATCC AGCTGG ] [+] EMBL C71937 [ AATATGGCTTCTTCCAAGATGACGCTGCTCCCCGTCCTCCTCCTCCTCGCCGCGGCCTCGCCGGCGG GCTTGGGCGCTNTCNACGTGAACCANATGCTCGCCGACAAGTCCCAGTACGGGTCGTTCCTGAAGTTGCTGACGCAGACGAAGGTCGCGGAGGAGACGAACCGGCTCAAGTCGGCGTCGCTGCTGGTCCTCCAAGACAAGGCCATGAAGCCGATCACGTCGCTCCCCGCCGACAAGCAGCGGATGGCCATGGCCAACCACGTCCTCCTCAAGTACTTCGA CCCCATCC AGCTGGGCGAGATGAAGGACCGNACCGCCAT ] [+] EMBL C72218 [ CAAGTCGGCGTCGCTGCTGGTCCTCCAAGACAAGGCCATGAAGCCGATCACGTCGCTCCCCGCCGACAAGCAGCGGATGGCCATGGCCAACCACGTCCTCCTCAAGTACTTCGA CCCCATCC AGCTGGGCGAGATGAAGGACCGCACCGCCATGCTCCCCACGCTGCTGTCCAACACCGACAAGAAGCTCGGCGTCGTCAACTACACCAAGGCCAGCGACGGGCAGATGTACCTGGGCG CCCCGG GGGGCCTNCGTCG CAAGTTCGTCAAGGTCGTCGCCGNG GCCCCTACGGCATCTTCATCATGGAGGT ANCGAGG CATTCTGCCG CCGNGTTC GTTGCANCGGCGGCCCCGGCCG ] [+] EMBL AU165454 [ TCGACCCCCATCCAAGCTGGGCGAGATGAAGGACCGNA CGCAATGTTCCCCAGGCTGCTGTCNAACACCGACAAGAAGCTCGNCGTCGTCAACTACACCAAGNCCAGCGACGGGNAGATGTACCTGGG GCCCCCGGNGCGGCTTGCGTCGCCAAGCTCGTCAAGGTCGTCGCCGCGCGCCCNTACGCCATCTCCATCATGGAGGTCAGCGAGGCCATCCTGCCGCCCGCGCTCGGTGGCAGCGGCGGCCCCGGCCGGCGCGCCAAGGGCGGCAAGGGAAAGGTCAAGCCGAAGTCCAGCGACGCCGACGAAGCCGCGGCCAAGCCCGCCACGGAGCCAAAGGCAACCGATGTCCCTAAGTAAGCCGGTGG CAAGGTCGACGCCGATCGACGCGCTCGTCCGTCCACGTACAAGTTTGGAATTGGATAGCGCAATAACCACGCACGGCTAGGCGTAATGTGTGACGACACGTACGGCGCATTACCAGTCTAGTATACCATCACCTTTGACCTGTACTGCTAATTTTCAGTTTAATTTGTATTCGATCAAGTACGTGAAATTGGGTCGAGTTCGATCGATCGGTTGTTTCATACGAACCGAGTTTTGTACTGCTAaaaaaaa ] [+] EMBL C98819 [ naCGACGCCGACGAACCCGCGGCCAAGCCCGCCACGGAGCCAAAGGCAACCGATGTCCCTAAGTAAACCGNTGGCCAAGGTCGACGCCGATCGACGCGCTCGTCCGTCCACGTACAAGTTTGGAATTGGATAGCGCAATAACCACGCACGGCTAGGCGTAATGTGTGACGACACGTACGGCGCATTACCAGTCTAGTATACCATCACCTTTGACCTGTACTGCTAATTTTCAGTTTAATTTGTATTCGATCAAGTACGTGAAATTGGGTCGAGTTCGATCGATCGGTTGTTTCATACGAACCGAGTTTTGTACTGCTACTAATTAATGTAATGGCTTATGGCTAATGCAAATATTTGCATGTATACGGCTGATCGATGTGCATATACTGCACATTATGTTCAAGNGAAAAA] [+] EMBL AU197244 [ AATTGGATAGCGCAATAACCACGCACGGCTAGGCGTAATGTGTGACGACACGTACGGNGNATTACCAGTCTAGTATACCATCACCTTTGACCTGTACTGCTAATTTTCAGTTTAATTTGTATTCGATCAAGTACGTGAAATTGGGTCGAGTTCGATCGATCGGTTGTTTCATACGAACCGAGTTTTGTACTGCTACTAATTAATGTAATGGCTTATGGCTAATGCAAATATTTGCAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||