cluster # 10109

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Oryza sativa
cluster # 10109 cluster # 10109 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10109#0 length = 1527 sequences # 5

consensus_10109#1 length = 801 sequences # 1
consensus_10109#2 length = 767 sequences # 1

consensusID : consensus_10109#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1527
fasta sequence

                              [CAGCCTTCCAAGTTCCAACCCCCCCGCCGCATCCCCTCCCCCCACTCCACTCCTCCCGAATCCCAATGGCGTCGTCGTCGTCGTCTTCTTCGTCGTCGCCGCCGCCGCCTCCGCCGCGCCGCTCCGTGTTCGACGCCGCCTACATCCGCGCGGAGTTCGCGGCGGCCGGCATCTCCCCTCACTTCATCCCTCTCATCTGGAAGTATGTGTTGCAGAACCCCAGGTGCGGCGACCTGGACGCCGTCCCGTCGCTCCCGGCGGCCGCGTACGCGCTCCTTCGGCAGAAGTTCCAGCCGACCACGTCGACGCTCACCACCGCCGCGGAGTCCAAGGACCGCACCACTACCAAGCTCCTTATCCGACTCAAGAATGGGGAATCTGTAGAAGCAGTGATCATGCGGTATGACACGCGATTGGGGAAGTATGACGGGAAGCCTCGGCCTGGTGGCGTGCGCTCAACCCTCTGTGTCTCCTCACAGGTAGGATGCAAGATGGGCTGTAGATTCTGTGCTACAGGAACGATGGGCTTCAAAAGCAATCTGTCTTCAGGAGAAATTGTGGAGCAGTTGGTTCATGCATCCCGTTATTCTCAGATTCGGAATGTTGTTTTCATGGGAATGGGGGAGCCATTAAACAACTATACTGCTTTGGTTGAAGCTATCCAAGTCTTGATAGGCTCTCCATTCCAGCTTTCACCTAAGAGAATTACTGTATCTACTGTTGGGATTATCCATTCCATCAATAAGTTCAATAATGATCTTCCCAATATAAATCTAGCTGTGTCCTTGCACGCTCCTGACCAAGACATACGCTGTCATATAATGCCTGCTGCCCGGGCCTTTCCTTTAGTAAAGCTAATGAATGCACTGCAATCATATCAAAATGAGAGCAAGCAGACCATCTTTATTGAGTACATCATGCTCGATGGAGTTAACGATCAGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGACTAGCAGCGAACATAATGTGAAGAAGTTCCAGAAGATCCTAAGAGGAATTTACAACATCAGAACCACTATTCGCCAGCAAATGGGTCAAGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGGTGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAATCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAAGTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGCTACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTTTGCGCAACAAACCCTGTTATTGTAGATGGGGTAATGTTATCTCAGCAACCCATCCTTGCAATGAACTGTGAAAAATCGCTTTGCCTTGCAAAAAAAAAAAAA]

[+] EMBL AK071317             [CAGCCTTCCAAGTTCCAACCCCCCCGCCGCATCCCCTCCCCCCACTCCACTCCTCCCGAATCCCAATGGCGTCGTCGTCGTCGTCTTCTTCGTCGTCGCCGCCGCCGCCTCCGCCGCGCCGCTCCGTGTTCGACGCCGCCTACATCCGCGCGGAGTTCGCGGCGGCCGGCATCTCCCCTCACTTCATCCCTCTCATCTGGAAGTATGTGTTGCAGAACCCCAGGTGCGGCGACCTGGACGCCGTCCCGTCGCTCCCGGCGGCCGCGTACGCGCTCCTTCGGCAGAAGTTCCAGCCGACCACGTCGACGCTCACCACCGCCGCGGAGTCCAAGGACCGCACCACTACCAAGCTCCTTATCCGACTCAAGAATGGGGAATCTGTAGAAGCAGTGATCATGCGGTATGACACGCGATTGGGGAAGTATGACGGGAAGCCTCGGCCTGGTGGCGTGCGCTCAACCCTCTGTGTCTCCTCACAGGTAGGATGCAAGATGGGCTGTAGATTCTGTGCTACAGGAACGATGGGCTTCAAAAGCAATCTGTCTTCAGGAGAAATTGTGGAGCAGTTGGTTCATGCATCCCGTTATTCTCAGATTCGGAATGTTGTTTTCATGGGAATGGGGGAGCCATTAAACAACTATACTGCTTTGGTTGAAGCTATCCAAGTCTTGATAGGCTCTCCATTCCAGCTTTCACCTAAGAGAATTACTGTATCTACTGTTGGGATTATCCATTCCATCAATAAGTTCAATAATGATCTTCCCAATATAAATCTAGCTGTGTCCTTGCACGCTCCTGACCAAGACATACGCTGTCATATAATGCCTGCTGCCCGGGCCTTTCCTTTAGTAAAGCTAATGAATGCACTGCAATCATATCAAAATGAGAGCAAGCAGACCATCTTTATTGAGTACATCATGCTTGATGGAGTTAACGATCAGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAGTGTTTAAAGCGGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGACTAGCAGCGAACATAATGTGAAGAAGTTCCAGAAGATCCTAAGAGGAATTTACAACATCAGAACCACTATTCGCCAGCAAATGGGTCAAGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGGTGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAATCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAAGTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGCTACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTCTGCGCAACAAACCCTGTTATTGTAGATGGGGTAATGTTATCTCAGCAACCCATCCTTGCAATGAACTGTGAAAAATCGC                       ]
[-] EMBL CB672474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATGATCTTCCCAATATAAATCTAGCTGTGTCCTTGCACGCTCCTGACCAAGACATACGCTGTCATATAATGCCTGCTGCCCGGGCCTTTCCTTTAGTAAAGCTAATGAATGCACTGCAATCATATCAAAATGAGAGCAAGCAGACCATCTTTATTGAGTACATCATGCTTGATGGAGTTAACGATCAGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGACTAGCAGCGAACATAATGTGAAGAAGTTCCAGAAGATCCTAAGAGGAATTTACAACATCAGAACCACTATTCGCCAGCAAATGGGTCAAGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGGTGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAATCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAAGTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGCTACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTCTGCGCAACAAACCCTGTTATTGTAGATGGGGTAATGTTATCTCAGCAACCCATCAAGGCAATGAACTGTGAAAAATC                         ]
[-] EMBL CA762249             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GACATACGCTGTTATATAATGCCTGCTGCCCGGGCCTTTCCTTTAGTAAAGCTAATGAATGCCCTGCAATCATATCAAAATGAGAGCAAGCAGACCATCTTTATTGAGTACATCATGCTCGATGGAGTTAACGATCAGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGACTAGCAGCGAACATAATGTGAAGAAGTTCCAGAAGATCCTAAGAGGAATTTACAACATCAGAACCACTATTCGCCAGCAAATGGGTCAAGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGGTGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAATCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAAGTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGCTACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTTTGCGCAACAAACCCTGTTATTGTAGATGGGGTAATGTTATCTCAGCAACCCATCCTTGCAAaaaaaaaaa                                ]
[-] EMBL CA762248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCAAAATGAGAGCAAGCAGACCATCTTTATTGAGTACATCATGCTCGATGGAGTTAACGATCAGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGACTAGCAGCGAACATAATGTGAAGAAGTTCCAGAAGATCCTAAGAGGAATTTACAACATCAGAACCACTATTCGCCAGCAAATGGGTCAAGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGGTGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAATCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAAGTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGCTACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTTTGCGCAACAAACCCTGTTATTGTAGATGGGGTAATGTTATCTCAGCAACCCATCCTTGCAATGAACTGTGAAAAATCGCTTTGCCTTGCAAAAAAAAAAAAA]
[-] EMBL CA762247             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCAAAATGAGAGCAAGCAGACCATCTTTATTGAGTACATCATGCTCGATGGAGTTAACGATCAGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGACTAGCAGCGAACATAATGTGAAGAAGTTCCAGAAGATCCTAAGAGGAATTTACAACATCAGAACCACTATTCGCCAGCAAATGGGTCAAGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGGTGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAATCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAAGTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGCTACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTTTGCGCAACAAACCCTGTTATTGTAGATGGGGTAATGTTATCTCAGCAACCCATCCTTGCAATGAACTGTGAAAAATCGCTTTGCCTTGCAAAAAAAAAAAAA]




>consensus_10109#0
CAGCCTTCCAAGTTCCAACCCCCCCGCCGCATCCCCTCCCCCCACTCCACTCCTCCCGAA
TCCCAATGGCGTCGTCGTCGTCGTCTTCTTCGTCGTCGCCGCCGCCGCCTCCGCCGCGCC
GCTCCGTGTTCGACGCCGCCTACATCCGCGCGGAGTTCGCGGCGGCCGGCATCTCCCCTC
ACTTCATCCCTCTCATCTGGAAGTATGTGTTGCAGAACCCCAGGTGCGGCGACCTGGACG
CCGTCCCGTCGCTCCCGGCGGCCGCGTACGCGCTCCTTCGGCAGAAGTTCCAGCCGACCA
CGTCGACGCTCACCACCGCCGCGGAGTCCAAGGACCGCACCACTACCAAGCTCCTTATCC
GACTCAAGAATGGGGAATCTGTAGAAGCAGTGATCATGCGGTATGACACGCGATTGGGGA
AGTATGACGGGAAGCCTCGGCCTGGTGGCGTGCGCTCAACCCTCTGTGTCTCCTCACAGG
TAGGATGCAAGATGGGCTGTAGATTCTGTGCTACAGGAACGATGGGCTTCAAAAGCAATC
TGTCTTCAGGAGAAATTGTGGAGCAGTTGGTTCATGCATCCCGTTATTCTCAGATTCGGA
ATGTTGTTTTCATGGGAATGGGGGAGCCATTAAACAACTATACTGCTTTGGTTGAAGCTA
TCCAAGTCTTGATAGGCTCTCCATTCCAGCTTTCACCTAAGAGAATTACTGTATCTACTG
TTGGGATTATCCATTCCATCAATAAGTTCAATAATGATCTTCCCAATATAAATCTAGCTG
TGTCCTTGCACGCTCCTGACCAAGACATACGCTGTCATATAATGCCTGCTGCCCGGGCCT
TTCCTTTAGTAAAGCTAATGAATGCACTGCAATCATATCAAAATGAGAGCAAGCAGACCA
TCTTTATTGAGTACATCATGCTCGATGGAGTTAACGATCAGGAGCAGCATGCCCACCAGC
TTGGTAAATTACTTGAAATGTTTAAAGCGGTTGTTAATCTGATACCATTCAATCCCATTG
GCTCATCAAACAATTTCAAGACTAGCAGCGAACATAATGTGAAGAAGTTCCAGAAGATCC
TAAGAGGAATTTACAACATCAGAACCACTATTCGCCAGCAAATGGGTCAAGACATAGCTG
GCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGGTGGTGCCACCC
TTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAATCCTCACAAGA
TACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAAGTTGATTTTGGC
CGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGCTACACATTGGCA
AAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTTTGCGCAACAAACCCT
GTTATTGTAGATGGGGTAATGTTATCTCAGCAACCCATCCTTGCAATGAACTGTGAAAAA
TCGCTTTGCCTTGCAAAAAAAAAAAAA

consensusID : consensus_10109#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 801
fasta sequence

                              [AAGACCTGCTGAAGATTCTGTGCTACAGGAACGATGGGCTTCAAAAGCAATCTGTCTTCAGGAGAAATTGTGGAGCAGTTGGTTCATGCATCCCGTTATTCTCAGATTCGGAATGTTGTTTTCATGGGAATGGGGGAGCCATTAAACAACTATACTGCTTTGGTTGAAGCTATCCAAGTCTTGATAGGCTCTCCATTCCAGCTTTCACCTAAGAGAATTACTGTATCTACTGTGAGTATAACTGCACAAGTACCTCATTTTGCATGTGGAATAATTGTTCTTGAGATGGCTGTTGGAAGGCTATCTTGTGTTTGCATTTAACCTTTTAAAAGTTCAATTTAACCTTCTGAACAACCTAGTACTTGCTCCTGTGCCATGCTAAACACATTTTGGAAAATACGGAAAAGAGTTTCACCAACTTTGCAAGTATTGCAGTTGGCTTTTGGATATTCTAAGGATATCCTGTTTTAATATTGTACAATGCCTTTCTAAATGAATAATGAATTTCAGATGTTCTATCAGGTTTCTAATATCATACATTTCTTAGGAATCAAAAATATATTTCCACCCACCTATTATTGAGTCCTTTCTAGTATTTACTCCTCAGATTTACTTTTCAGTATAGCATGGTTCTTATCATTCTGTCTGGTGAAAGCTTTGCTGCTGATTTACTTGATCTTTTACAGTTTTATGCTCGTGTTTTGACATTAGTAAATCGTTGTGATTATGATGCATGTCCCTATATGATCCATTAAGTTGTAAATCCTGCTAATATTTAGTTTAGCAATTGAATTTTCCTTG]

[+] EMBL CB624399             [AAGACCTGCTGAAGATTCTGTGCTACAGGAACGATGGGCTTCAAAAGCAATCTGTCTTCAGGAGAAATTGTGGAGCAGTTGGTTCATGCATCCCGTTATTCTCAGATTCGGAATGTTGTTTTCATGGGAATGGGGGAGCCATTAAACAACTATACTGCTTTGGTTGAAGCTATCCAAGTCTTGATAGGCTCTCCATTCCAGCTTTCACCTAAGAGAATTACTGTATCTACTGTGAGTATAACTGCACAAGTACCTCATTTTGCATGTGGAATAATTGTTCTTGAGATGGCTGTTGGAAGGCTATCTTGTGTTTGCATTTAACCTTTTAAAAGTTCAATTTAACCTTCTGAACAACCTAGTACTTGCTCCTGTGCCATGCTAAACACATTTTGGAAAATACGGAAAAGAGTTTCACCAACTTTGCAAGTATTGCAGTTGGCTTTTGGATATTCTAAGGATATCCTGTTTTAATATTGTACAATGCCTTTCTAAATGAATAATGAATTTCAGATGTTCTATCAGGTTTCTAATATCATACATTTCTTAGGAATCAAAAATATATTTCCACCCACCTATTATTGAGTCCTTTCTAGTATTTACTCCTCAGATTTACTTTTCAGTATAGCATGGTTCTTATCATTCTGTCTGGTGAAAGCTTTGCTGCTGATTTACTTGATCTTTTACAGTTTTATGCTCGTGTTTTGACATTAGTAAATCGTTGTGATTATGATGCATGTCCCTATATGATCCATTAAGTTGTAAATCCTGCTAATATTTAGTTTAGCAATTGAATTTTCCTTG]




>consensus_10109#1
AAGACCTGCTGAAGATTCTGTGCTACAGGAACGATGGGCTTCAAAAGCAATCTGTCTTCA
GGAGAAATTGTGGAGCAGTTGGTTCATGCATCCCGTTATTCTCAGATTCGGAATGTTGTT
TTCATGGGAATGGGGGAGCCATTAAACAACTATACTGCTTTGGTTGAAGCTATCCAAGTC
TTGATAGGCTCTCCATTCCAGCTTTCACCTAAGAGAATTACTGTATCTACTGTGAGTATA
ACTGCACAAGTACCTCATTTTGCATGTGGAATAATTGTTCTTGAGATGGCTGTTGGAAGG
CTATCTTGTGTTTGCATTTAACCTTTTAAAAGTTCAATTTAACCTTCTGAACAACCTAGT
ACTTGCTCCTGTGCCATGCTAAACACATTTTGGAAAATACGGAAAAGAGTTTCACCAACT
TTGCAAGTATTGCAGTTGGCTTTTGGATATTCTAAGGATATCCTGTTTTAATATTGTACA
ATGCCTTTCTAAATGAATAATGAATTTCAGATGTTCTATCAGGTTTCTAATATCATACAT
TTCTTAGGAATCAAAAATATATTTCCACCCACCTATTATTGAGTCCTTTCTAGTATTTAC
TCCTCAGATTTACTTTTCAGTATAGCATGGTTCTTATCATTCTGTCTGGTGAAAGCTTTG
CTGCTGATTTACTTGATCTTTTACAGTTTTATGCTCGTGTTTTGACATTAGTAAATCGTT
GTGATTATGATGCATGTCCCTATATGATCCATTAAGTTGTAAATCCTGCTAATATTTAGT
TTAGCAATTGAATTTTCCTTG

consensusID : consensus_10109#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 767
fasta sequence

                              [TCTTTTAAATGGTTGAAAACCTTCCTGATCATCTTTGCGGTATACTTACCCTGGATGTTCAATTGTTTGATATTCTAATTTCTGCCCACTTGTATTATGATTTATGACCCATGGTCTTTCTGTTGGGTCACGGTGTATTTGTTTGGAGAATTTCCTTTTAGTGGTTTGACTTTTCATATATTAACATCTTCAGTTGGTTTGCCTGTTATTGTCTTCATAATATGTGTTATATCCTCATATTGGAACCTTTGAATCAATTCTCTCTTGATTGCTTCCTCTCTTGATCACTAACAGGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGACTAGCAGCGAACATAATGTGAAGAAGTTCCAGAAGATCCTAAGAGGAATTTACAACATCAGAACCACTATTCGCCAGCAAATGGGTCAAGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGGTGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAATCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAAGTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGCTACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTCTGCGCAACAAACCCTGTTATTGTAGATGGGGTAATGT]

[-] EMBL CB624400             [TCTTTTAAATGGTTGAAAACCTTCCTGATCATCTTTGCGGTATACTTACCCTGGATGTTCAATTGTTTGATATTCTAATTTCTGCCCACTTGTATTATGATTTATGACCCATGGTCTTTCTGTTGGGTCACGGTGTATTTGTTTGGAGAATTTCCTTTTAGTGGTTTGACTTTTCATATATTAACATCTTCAGTTGGTTTGCCTGTTATTGTCTTCATAATATGTGTTATATCCTCATATTGGAACCTTTGAATCAATTCTCTCTTGATTGCTTCCTCTCTTGATCACTAACAGGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGACTAGCAGCGAACATAATGTGAAGAAGTTCCAGAAGATCCTAAGAGGAATTTACAACATCAGAACCACTATTCGCCAGCAAATGGGTCAAGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGGTGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAATCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAAGTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGCTACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTCTGCGCAACAAACCCTGTTATTGTAGATGGGGTAATGT]




>consensus_10109#2
TCTTTTAAATGGTTGAAAACCTTCCTGATCATCTTTGCGGTATACTTACCCTGGATGTTC
AATTGTTTGATATTCTAATTTCTGCCCACTTGTATTATGATTTATGACCCATGGTCTTTC
TGTTGGGTCACGGTGTATTTGTTTGGAGAATTTCCTTTTAGTGGTTTGACTTTTCATATA
TTAACATCTTCAGTTGGTTTGCCTGTTATTGTCTTCATAATATGTGTTATATCCTCATAT
TGGAACCTTTGAATCAATTCTCTCTTGATTGCTTCCTCTCTTGATCACTAACAGGTTGTT
AATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGACTAGCAGCGAACAT
AATGTGAAGAAGTTCCAGAAGATCCTAAGAGGAATTTACAACATCAGAACCACTATTCGC
CAGCAAATGGGTCAAGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGAT
GAAAGATCAGCGGGTGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCT
CATCAAAGATGAAATCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTT
TAAAATATGGAAAGTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCA
CAATTTTGTTTGCTACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTA
CGCGAAAGTCTGCGCAACAAACCCTGTTATTGTAGATGGGGTAATGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10109#0      CAGCCTTCCAAGTTCCAACCCCCCCGCCGCATCCCCTCCCCCCACTCCACTCCTCCCGAA 60
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      TCCCAATGGCGTCGTCGTCGTCGTCTTCTTCGTCGTCGCCGCCGCCGCCTCCGCCGCGCC 120
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      GCTCCGTGTTCGACGCCGCCTACATCCGCGCGGAGTTCGCGGCGGCCGGCATCTCCCCTC 180
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      ACTTCATCCCTCTCATCTGGAAGTATGTGTTGCAGAACCCCAGGTGCGGCGACCTGGACG 240
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      CCGTCCCGTCGCTCCCGGCGGCCGCGTACGCGCTCCTTCGGCAGAAGTTCCAGCCGACCA 300
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      CGTCGACGCTCACCACCGCCGCGGAGTCCAAGGACCGCACCACTACCAAGCTCCTTATCC 360
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      GACTCAAGAATGGGGAATCTGTAGAAGCAGTGATCATGCGGTATGACACGCGATTGGGGA 420
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      AGTATGACGGGAAGCCTCGGCCTGGTGGCGTGCGCTCAACCCTCTGTGTCTCCTCACAGG 480
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      TAGGATGCAAGATGGGCTGTAGATTCTGTGCTACAGGAACGATGGGCTTCAAAAGCAATC 540
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      --------AAGACCTGCTGAAGATTCTGTGCTACAGGAACGATGGGCTTCAAAAGCAATC 52
                                                                                   

consensus_10109#0      TGTCTTCAGGAGAAATTGTGGAGCAGTTGGTTCATGCATCCCGTTATTCTCAGATTCGGA 600
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      TGTCTTCAGGAGAAATTGTGGAGCAGTTGGTTCATGCATCCCGTTATTCTCAGATTCGGA 112
                                                                                   

consensus_10109#0      ATGTTGTTTTCATGGGAATGGGGGAGCCATTAAACAACTATACTGCTTTGGTTGAAGCTA 660
consensus_10109#2      ------------------------------------------------------------
consensus_10109#1      ATGTTGTTTTCATGGGAATGGGGGAGCCATTAAACAACTATACTGCTTTGGTTGAAGCTA 172
                                                                                   

consensus_10109#0      TCCAAGTCTTGATAGGCTCTCCATTCCAGCTTTCACCTAA--GAGAATTACTGTATCTAC 718
consensus_10109#2      ----------------------------TCTTTTAAATGGTTGAAAACCTTCCTGATCAT 32
consensus_10109#1      TCCAAGTCTTGATAGGCTCTCCATTCCAGCTTTCACCTAA--GAGAATTACTGTATCTAC 230
                                                    **** *  *    ** **      *    * 

consensus_10109#0      TGTTGGGATTATCCATTCCATCAATAAGTTCAATAAT--GATCTTCCCAATATAAATCTA 776
consensus_10109#2      CTTTGCGGT-ATACTTACCCTGGAT--GTTCAATTGTTTGATATTCT-AATTTCTGCCCA 88
consensus_10109#1      TGTGAGTATAACT--------------GCACAAGTACCTCATTTTGC--ATGTGGAATAA 274
                         *     * *                *  ***       ** **    ** *      *

consensus_10109#0      GCTGTGTCCTTGCACGCTCCTGACCAAGACATACGCTGTCATATAATGCCTGCTGCCCGG 836
consensus_10109#2      CTTGTATTATGATTTATGACCCAT-GGTCTTTCTGTTGGGTCACGGTGTATTTGTTTGGA 147
consensus_10109#1      T---TGTTCTTG--------------AGATGGCTGTTGGAAGGC--TATCTTGTGTTTGC 315
                           * *  *                        * **        *   *       * 

consensus_10109#0      GCCTTTCCTTTAGTAAAGCTAATGAATGCACTGCAATCATATCAAAATGAGAGCAAGCAG 896
consensus_10109#2      GAATTTCCTTTTAGTGGTTTGACTTTTCATATATTAACATCTTCAGTTGGTTTGCCTGTT 207
consensus_10109#1      ATTTAACCTTTTAAAAGTTCAATTTAACCTTCTGAACAACCT---AGTACTTGCTCCTGT 372
                          *  *****          *             *  *  *     *            

consensus_10109#0      ACCATCTTTATTGAGTACATCATGCTCGATGGAGTTAACGATCAGGAGCAGCATGCCCAC 956
consensus_10109#2      ATTGTCTTCATAATATGTGTTATATCCT-CATATTGGAACCTTTGAATCA--ATTCTCTC 264
consensus_10109#1      GCCAT----GCTAAACACATTTTGGAAAATACGGAAAAGAGTTTC-ACCAACTTTGCAAG 427
                           *              *  *              *   *    * **   *      

consensus_10109#0      CAGCTTGGTAAATTACTTGAAATGTTTAAAGCGGTTGTTAATCTGATACCATTCAATCCC 1016
consensus_10109#2      TTGATTGCTTCCTCTCTTG--ATCACTAACA-GGTTGTTAATCTGATACCATTCAATCCC 321
consensus_10109#1      TATTGCAGTTGGCTTTTGG--ATATTCTAAGGATATCCTGTTTTAATATTGTACAATGCC 485
                               *       * *  **     *      *  *  * * ***   * **** **

consensus_10109#0      ATT--GGCTCATCAAACAATTTCAAGACTAGCAGCGAACAT--AATGTGAAGAAGTTCCA 1072
consensus_10109#2      ATT--GGCTCATCAAACAATTTCAAGACTAGCAGCGAACAT--AATGTGAAGAAGTTCCA 377
consensus_10109#1      TTTCTAAATGAATAATGAATTTCAGATGTTCTATCAGGTTTCTAATATCATACATTTCTT 545
                        **     * *  **  *******    *   * *     *  *** * *   * ***  

consensus_10109#0      GAAGATCCTAAGAGGAATTTACA---ACATCAGAACCACTATTCGCCAGCAAATGGGTCA 1129
consensus_10109#2      GAAGATCCTAAGAGGAATTTACA---ACATCAGAACCACTATTCGCCAGCAAATGGGTCA 434
consensus_10109#1      AGGAATCA-AAAATATATTTCCACCCACCTATTATTGAGTCCTTTCTAGTATTTACTCCT 604
                           ***  ** *   **** **   ** *   *   * *  *  * ** *  *    * 

consensus_10109#0      AGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGG 1189
consensus_10109#2      AGACATAGCTGGCGCCTGTGGCCAGCTAGTGGTTAGCCTCCCCGATGAAAGATCAGCGGG 494
consensus_10109#1      CAGATTTACTTTTCAGTATAGCATGGTTCTTATCATTCTGTCTGGTGAAAGCTTTGCTGC 664
                            *  **      * * **  * *  *  * *  **  * * ****** *  ** * 

consensus_10109#0      TGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAA 1249
consensus_10109#2      TGGTGCCACCCTTCTCTCAGACATTGAAGACATCAGGATCTGACCTCATCAAAGATGAAA 554
consensus_10109#1      TGATTTACTTGATCTTTTACAGTTTTATGC--TCGTGTTTTGACATTAGTAAAT-CGTTG 721
                       ** *        *** * * *  ** * *   **  * * **** * *  ***   *   

consensus_10109#0      TCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAA- 1308
consensus_10109#2      TCCTCACAAGATACCTGTAACTAGCATTATAGTTTCAATGCAGGTTTAAAATATGGAAA- 613
consensus_10109#1      TGATTAT--GATGCATGT------CCCTATATGATCCATTAAGTTGTAAATCCTGCTAAT 773
                       *  * *   *** * ***      *  ****   ** **  ** * ****   **  ** 

consensus_10109#0      GTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGC 1368
consensus_10109#2      GTTGATTTTGGCCGGTGTGGTGTGTTTCCCTTCATATTTGGGAGGCACAATTTTGTTTGC 673
consensus_10109#1      ATTTAGTTTAGCAATTGAATTTTCCTTG-------------------------------- 801
                        ** * *** **   **   * *  **                                 

consensus_10109#0      TACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTTTGC 1428
consensus_10109#2      TACACATTGGCAAAAGGCCCCAGCTTTTGTGTATAGGCAACTATCTACGCGAAAGTCTGC 733
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      GCAACAAACCCTGTTATTGTAGATGGGGTAATGTTATCTCAGCAACCCATCCTTGCAATG 1488
consensus_10109#2      GCAACAAACCCTGTTATTGTAGATGGGGTAATGT-------------------------- 767
consensus_10109#1      ------------------------------------------------------------
                                                                                   

consensus_10109#0      AACTGTGAAAAATCGCTTTGCCTTGCAAAAAAAAAAAAA 1527
consensus_10109#2      ---------------------------------------
consensus_10109#1      ---------------------------------------