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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10127#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 4812 fasta sequence
[AAACCCTAGCCCCGCGCCGCTCCATCTCCCACCGGCGCGCGCCGTCGCCGCCGCCGCCGCCTCCGCCTCCGCCTCGCGCCGTCGCCGCCACTTCCGCCTTCGCCTCCACCTCCGCCTCGTTTCCCCAACGCGCCACGGCAAAAGCGGGGGAACCCGCGCTGGAAAACTTGAAAAACCCCAACCTAACCCCCTCCCACCCCGCCATTCCTCACATTTGCACCCCCATCGCTGCGCTCTAGGTTTTTTTTTTTCCTCCGCGCCTTCTCCCCGCAAGAGGCGTATTGCTCCGGCGATGGCTTGGGCGGAGGACGAGGCGATTGGCCCCGACGTGGCCTCCGCGGGGCTCCACGTCTCGGAGCGGATCGGCCGCGACGCCGCCGCTCAGCCCGACCTGGAGGAGGCCCTCGAGGCCTCGCGCTACGCCTCCCATCCCTACTCCTCGCATCCCAAGGAGTGGCCTCCTTTGGTGGAAGTAGCAGAAACTAGGCAGTTACCTCCTATGCTGGTTGAAAGATATAATGCCGCTGCTGGTGAAGGAACAGCTCTTTGTGGAATATTTTCTGAAGTACACCGTGCCTGGGCAACTGTTGACAATTCATTTTTTATTTGGCGCTTTGATAAGTGGGATGGGCAATGTCAAGAGCATAACGCGGATGAACAAGTGATTTGTGCTGTTGGCCTTGCTAGAGCAAAGCCTGGTGTTTTTGTTGCAGCCATTCAGTACCTTTTAGTATTAGCAACTCCTGTTGAGCTGATACTTGTCGGAGTTTGCTGTTCAGCTAGTGGTGATGGAACTGATCCGTATGCGGAGCTCTCATTGCAACCTTTACCTGAGTACATTATTTCTACTGATGGTGTCACAATGACATGCATCACTTGTACAGATAAGGGTCAAATTTTCCTATCTGGGCGTGATGGCCATATATATGAGCTGCAATATACAACTGGTTCAGGTTGGCGAAAGCGCTGCCGTAAAGTTTGCCTTACTACTGGTTTAGGCAGCCTTCTTTCCAGGTGGGTTTTGCCAAATGCATTCAAGTTCTCGGCTGTTGATCCTATTGTTGATATGGTTATTGATGAGGAGAGAAATACAATTTATGCGCGCACAGAAGGCATGAAGATGCAGCTATTTGATTTAGGAGCTACTGGCGATGGTCCTCTGAGAAAGATCACTGAAGAAAAGAATCTTGTTGATCCACGAGATGCACCTTATGGCAGTCGGAGGCCTAATGCACAAAGAGCTGCACGATCCCCAAAACCATCAATTGTCTGCATTGCACCTTTGTCAGCTATGGAATCAAAATGGCTTCATGCTGTTGCTGTTTTATCAGATGGCAAGAGACTGTTCCTTTCTACATCAGGTGGGAGTAGTTCAGTTGGACTTAGCACTGGTTTGCAGAGGCCAAGCTGTCTAAAAATTGTTGCTACCAGGCCTTCCCCACCTCTAGGGGTTGGTGGTGGTCTCACATTTGGTGCTGTTTCAGCTGCTGGCAGAGCTCAACCTGAGGATCTTGCTTTAAAAGTGGAGTCAGCTTTCTATTCTGCCGGTGCTCTTATAATGTCAGATTCATCTGCTACAGCTATGTCCTCCCTTCTCGCTGTGCAGAAAGATTCAGCTGCCCAATTATCCCTTCCCAGTACTTTTGGGACAGCATCTAGAAGCTCGAGGGCTCTGCGAGAAACAGTCTCTGCTTTGCCTGTTGAAGGTCGGATGCTTTGTGCCTCTGATGTCTTCCCGCTTCCAGATGCTGCTTTCATCATGCAGTCATTATATGCAGACGTGGAATGCTTTGCATCTTTTGGAAAACCTTCTGAGAAGTCATCCATTAAACTGTGGGCTAAAGGAGATCTTCCTACCCAGCATATCTTACCTCGGAGGAGGATTGTTATATTCAATACTATGGGTTTGATGGAGGTAGTTTTTAACAGACCTGTTGATATCCTAAGAAAATTGTTTGATGGGAACACTTTGAGATCTCAGTTAGAAGAATTCTTTAGCCGCTTTGGTGCTGGAGAGGCTGCAGCAATGTGCTTAATGCTAGCTGCTAAGCTGCTTTATGCTGAAGATAGCCTGATAAGCAATGCAGTTTCTGAGAAAGCTGCTGAAGCATTTGAGGACCCTGGACTTGTCGGAATGCCTCAAATTGATGGCAGTACTGCCTTGTCTAACACTCGAACTCAGGCTGGAGGCTTTAGTATGGGACAAGTTGTTCAAGAAGCACAACCTATATTTTCTGGTGCATATGAAGGGCTTTGCTTGTGCTCTTCTAGACTACTGTATCCTATCTGGGAACTTCCAATTATGGTGGTTCGAGGACTGGTAGGTTCCAATGATCGTGGTGATGGTGTGGTTGTTTGCAGGCTTTCTACTGGGGCCATGAAGGTTCTTGAGAGTAAGATCCGTTCATTGGAAACATTTTTGAGGTCAAGAAGAAACAAAAGAAGAGGACTTTATGGTTATGTTGCTGGTCTAGGAGATTCTGGTTCCATACTGTACAAAGCAGGGCCTATCATTGGGTCTGGTGGTCATAGCAGTGGGAAGAGTCCATACAGCTCTCGCATTAGAGACGCTGATCCAACAGATCAGTCTGCATCAAATAAAAAGCAAAGGCTGCCTTACACATCAGCCGAACTAGCTGCGATGGAGGTGAGGGCAATTGAGTGCCTTAGGCGGTTGCTTCGAAGATCTGGTGAAGCACTCTTTCTGCTTCAACTTATTTGCCAGCATAATGTTGCTCGCTTGGTTCAGACACTAGGTAATGATTTGCGCAAGAAACTAGTTCAGTTAACATTTCATCAGTTGGTATGTTCTGAGGATGGTGACCAGCTTGCCATGCGCCTTATTTCTGCACTCATGGAGTACTATATCGGTCCAGAGGGCAGGGGAACTGTTGATGAGATCAGCACTAAATTGGGAGAGGGTTGTCCTAGTTACTTCAATGAGTCAGATTATAAATATTACTTAGCAGTGGAATGCCTTGAGAGAGCATCTATGACAAACAATCATGACGAGAAAGACATCCTTGCTAGAGATGCCTTCAATCTTTTAACTAAAATTCCTGACTCTGCTGACTTGAGTGCTATATGCAAGAGATTTGAGAACCTAAGGTTCTACGAGGCAGTAGTCCGTTTGCCTTTACAGAAAGCTCAAGCACTTGATTCCAATGCTGATGTTATTAATGGGCAAATCGACGCAAGGCATCATGATACTATAACTGCACAGCGTGAACAGTGCTATAAAATAGTTATGAATGCTTTACGTACCCTCAAGGGTGTTGGACAGAGTGGCACACAAGGTGCAGACAAGTCATCTGCTTCAGTTACTGCACTTGATCCAGCTTCTCGAGGGAAGTATATTAAACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAGGACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGTTGCTTTTCTCCAGAGCGCTGGTCGTAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGTTGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAAGTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAGAATGTTGTTGATATTGGCAGAAAGACAGTGCTCCAGTGCGGAAGAAGCTCCAACTCTTGACCAGAGGTATCAATATCTGAGCAGTGCAGCGATTCAGGCCAAAAGTGCAGGCATTACTGCAGATTCTTCGAGGAATCCTATTGATAGCAGCACGATAGATCTACTTGAAGGCAAACTTGCAGTTCTTCGGTTCCAAATGCAAATCAAGCAAGAACTAGAGTTCATGGCTTCACAGCTTGAAAATCTGTCAGGCAGTTCTGAATCACCAAATGATCCCTTTCCTCGTGATAACATTCTAGCTGATGCGGATACTGCTAGATTTGCCATGGACAAGGCTAAAGAGCTTTCACTGAATC-TAAAGAGTATTACTCAACTTTACAACGATTATGCTGTTCCATTTAATCTTTGGGAGGTTTGCCTGGAAATGCTCAACTTTGCAAATTATTCTGGAGATGCTGACAGTAAAATTGTTCGAGAAATTTGGGCCAGGCTTCTTGACCAGGCACTTACAAGAGGTGGTGTTGCAGAAGCATGTTCTGTGGTGAGAAGAGTAGGTTCAAAACTTGATCCTGCAGATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCGAGAAGGCTGCATTGGATAGATTAAGCTCAGGAGAAGAATTAGTTGGTGACGAGGATGTTGCAAGAGCCCTTCTCGGAGCCTGTAAAGGTCTACCTGAACCTGTGCTTGCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGGCTTCTGAGATCAGTTCTTGCAATCCTTCGTGAATGGGGCATGACTGTCATTGCACATAAACTAGGCACCACAACTGCTGGGGCTTCATTCTTTCTTGATGGAACATTTTCGCTGAATCAAACATGGTCTTTAAATCAAGGCGTTCGAGATAAAATAAGTAGTTTGGCAAACCGGTATATGGCTGAGGTGAGGCGGTTAAGCCTTCCAAAGAACCAAACAGAGAATGTCTATCGAGGTTTCCAAGAGCTAGAGGAGAAATTATTAACTAATTAGACATTTCAATTTGTATTCTCGGCACTGTAAAACATGGGTTCGTGCATTTGTTGTACCCAAGTAGAGAGATAAAGCTAAGCCATCCTGGTTCA]
[+] EMBL AK120378 [AAACCCTAGCCCCGCGCCGCTCCATCTCCCACCGGCGCGCGCCGTCGCCGCCGCCGCCGCCTCCGCCTCCGCCTCGCGCCGTCGCCGCCACTTCCGCCTTCGCCTCCACCTCCGCCTCGTTTCCCCAACGCGCCACGGCAAAAGCGGGGGAACCCGCGCTGGAAAACTTGAAAAACCCCAACCTAACCCCCTCCCACCCCGCCATTCCTCACATTTGCACCCCCATCGCTGCGCTCTAGGTTTTTTTTTTTCCTCCGCGCCTTCTCCCCGCAAGAGGCGTATTGCTCCGGCGATGGCTTGGGCGGAGGACGAGGCGATTGGCCCCGACGTGGCCTCCGCGGGGCTCCACGTCTCGGAGCGGATCGGCCGCGACGCCGCCGCTCAGCCCGACCTGGAGGAGGCCCTCGAGGCCTCGCGCTACGCCTCCCATCCCTACTCCTCGCATCCCAAGGAGTGGCCTCCTTTGGTGGAAGTAGCAGAAACTAGGCAGTTACCTCCTATGCTGGTTGAAAGATATAATGCCGCTGCTGGTGAAGGAACAGCTCTTTGTGGAATATTTTCTGAAGTACACCGTGCCTGGGCAACTGTTGACAATTCATTTTTTATTTGGCGCTTTGATAAGTGGGATGGGCAATGTCAAGAGCATAACGCGGATGAACAAGTGATTTGTGCTGTTGGCCTTGCTAGAGCAAAGCCTGGTGTTTTTGTTGCAGCCATTCAGTACCTTTTAGTATTAGCAACTCCTGTTGAGCTGATACTTGTCGGAGTTTGCTGTTCAGCTAGTGGTGATGGAACTGATCCGTATGCGGAGCTCTCATTGCAACCTTTACCTGAGTACATTATTTCTACTGATGGTGTCACAATGACATGCATCACTTGTACAGATAAGGGTCAAATTTTCCTATCTGGGCGTGATGGCCATATATATGAGCTGCAATATACAACTGGTTCAGGTTGGCGAAAGCGCTGCCGTAAAGTTTGCCTTACTACTGGTTTAGGCAGCCTTCTTTCCAGGTGGGTTTTGCCAAATGCATTCAAGTTCTCGGCTGTTGATCCTATTGTTGATATGGTTATTGATGAGGAGAGAAATACAATTTATGCGCGCACAGAAGGCATGAAGATGCAGCTATTTGATTTAGGAGCTACTGGCGATGGTCCTCTGAGAAAGATCACTGAAGAAAAGAATCTTGTTGATCCACGAGATGCACCTTATGGCAGTCGGAGGCCTAATGCACAAAGAGCTGCACGATCCCCAAAACCATCAATTGTCTGCATTGCACCTTTGTCAGCTATGGAATCAAAATGGCTTCATGCTGTTGCTGTTTTATCAGATGGCAAGAGACTGTTCCTTTCTACATCAGGTGGGAGTAGTTCAGTTGGACTTAGCACTGGTTTGCAGAGGCCAAGCTGTCTAAAAATTGTTGCTACCAGGCCTTCCCCACCTCTAGGGGTTGGTGGTGGTCTCACATTTGGTGCTGTTTCAGCTGCTGGCAGAGCTCAACCTGAGGATCTTGCTTTAAAAGTGGAGTCAGCTTTCTATTCTGCCGGTGCTCTTATAATGTCAGATTCATCTGCTACAGCTATGTCCTCCCTTCTCGCTGTGCAGAAAGATTCAGCTGCCCAATTATCCCTTCCCAGTACTTTTGGGACAGCATCTAGAAGCTCGAGGGCTCTGCGAGAAACAGTCTCTGCTTTGCCTGTTGAAGGTCGGATGCTTTGTGCCTCTGATGTCTTCCCGCTTCCAGATGCTGCTTTCATCATGCAGTCATTATATGCAGACGTGGAATGCTTTGCATCTTTTGGAAAACCTTCTGAGAAGTCATCCATTAAACTGTGGGCTAAAGGAGATCTTCCTACCCAGCATATCTTACCTCGGAGGAGGATTGTTATATTCAATACTATGGGTTTGATGGAGGTAGTTTTTAACAGACCTGTTGATATCCTAAGAAAATTGTTTGATGGGAACACTTTGAGATCTCAGTTAGAAGAATTCTTTAGCCGCTTTGGTGCTGGAGAGGCTGCAGCAATGTGCTTAATGCTAGCTGCTAAGCTGCTTTATGCTGAAGATAGCCTGATAAGCAATGCAGTTTCTGAGAAAGCTGCTGAAGCATTTGAGGACCCTGGACTTGTCGGAATGCCTCAAATTGATGGCAGTACTGCCTTGTCTAACACTCGAACTCAGGCTGGAGGCTTTAGTATGGGACAAGTTGTTCAAGAAGCACAACCTATATTTTCTGGTGCATATGAAGGGCTTTGCTTGTGCTCTTCTAGACTACTGTATCCTATCTGGGAACTTCCAATTATGGTGGTTCGAGGACTGGTAGGTTCCAATGATCGTGGTGATGGTGTGGTTGTTTGCAGGCTTTCTACTGGGGCCATGAAGGTTCTTGAGAGTAAGATCCGTTCATTGGAAACATTTTTGAGGTCAAGAAGAAACAAAAGAAGAGGACTTTATGGTTATGTTGCTGGTCTAGGAGATTCTGGTTCCATACTGTACAAAGCAGGGCCTATCATTGGGTCTGGTGGTCATAGCAGTGGGAAGAGTCCATACAGCTCTCGCATTAGAGACGCTGATCCAACAGATCAGTCTGCATCAAATAAAAAGCAAAGGCTGCCTTACACATCAGCCGAACTAGCTGCGATGGAGGTGAGGGCAATTGAGTGCCTTAGGCGGTTGCTTCGAAGATCTGGTGAAGCACTCTTTCTGCTTCAACTTATTTGCCAGCATAATGTTGCTCGCTTGGTTCAGACACTAGGTAATGATTTGCGCAAGAAACTAGTTCAGTTAACATTTCATCAGTTGGTATGTTCTGAGGATGGTGACCAGCTTGCCATGCGCCTTATTTCTGCACTCATGGAGTACTATATCGGTCCAGAGGGCAGGGGAACTGTTGATGAGATCAGCACTAAATTGGGAGAGGGTTGTCCTAGTTACTTCAATGAGTCAGATTATAAATATTACTTAGCAGTGGAATGCCTTGAGAGAGCATCTATGACAAACAATCATGACGAGAAAGACATCCTTGCTAGAGATGCCTTCAATCTTTTAACTAAAATTCCTGACTCTGCTGACTTGAGTGCTATATGCAAGAGATTTGAGAACCTAAGGTTCTACGAGGCAGTAGTCCGTTTGCCTTTACAGAAAGCTCAAGCACTTGATTCCAATGCTGATGTTATTAATGGGCAAATCGACGCAAGGCATCATGATACTATAACTGCACAGCGTGAACAGTGCTATAAAATAGTTATGAATGCTTTACGTACCCTCAAGGGTGTTGGACAGAGTGGCACACAAGGTGCAGACAAGTCATCTGCTTCAGTTACTGCACTTGATCCAGCTTCTCGAGGGAAGTATATTAAACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAGGACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGTTGCTTTTCTCCAGAGCGCTGGTCGTAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGTTGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAAGTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAGAATGTTGTTGATATTGGCAGAAAGACAGTGCTCCAGTGCGGAAGAAGCTCCAACTCTTGACCAGAGGTATCAATATCTGAGCAGTGCAGCGATTCAGGCCAAAAGTGCAGGCATTACTGCAGATTCTTCGAGGAATCCTATTGATAGCAGCACGATAGATCTACTTGAAGGCAAACTTGCAGTTCTTCGGTTCCAAATGCAAATCAAGCAAGAACTAGAGTTCATGGCTTCACAGCTTGAAAATCTGTCAGGCAGTTCTGAATCACCAAATGATCCCTTTCCTCGTGATAACATTCTAGCTGATGCGGATACTGCTAGATTTGCCATGGACAAGGCTAAAGAGCTTTCACTGAATC TAAAGAGTATTACTCAACTTTACAACGATTATGCTGTTCCATTTAATCTTTGGGAGGTTTGCCTGGAAATGCTCAACTTTGCAAATTATTCTGGAGATGCTGACAGTAAAATTGTTCGAGAAATTTGGGCCAGGCTTCTTGACCAGGCACTTACAAGAGGTGGTGTTGCAGAAGCATGTTCTGTGGTGAGAAGAGTAGGTTCAAAACTTGATCCTGCAGATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCGAGAAGGCTGCATTGGATAGATTAAGCTCAGGAGAAGAATTAGTTGGTGACGAGGATGTTGCAAGAGCCCTTCTCGGAGCCTGTAAAGGTCTACCTGAACCTGTGCTTGCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGGCTTCTGAGATCAGTTCTTGCAATCCTTCGTGAATGGGGCATGACTGTCATTGCACATAAACTAGGCACCACAACTGCTGGGGCTTCATTCTTTCTTGATGGAACATTTTCGCTGAATCAAACATGGTCTTTAAATCAAGGCGTTCGAGATAAAATAAGTAGTTTGGCAAACCGGTATATGGCTGAGGTGAGGCGGTTAAGCCTTCCAAAGAACCAAACAGAGAATGTCTATCGAGGTTTCCAAGAGCTAGAGGAGAAATTATTAACTAATTAGACATTTCAATTTGTATTCTCGGCACTGTAAAACATGGGTTCGTGCATTTGTTGTACCCAAGTAGAGAGATAAAGCTAAGCCATCCTGGTTCA]
[+] EMBL CB668198 [ GCTGCCCAATTATCCCTTCCCAGTACTTTTGGGACAGCATCTAGAAGCTCGAGGGCTCTGCGAGAAACAGTCTCTGCTTTGCCTGTTGAAGGTCGGATGCTTTGTGCCTCTGATGTCTTCCCGCTTCCAGATGCTGCTTTCATCATGCAGTCATTATATGCAGACGTGGAATGCTTTGCATCTTTTGGAAAACCTTCTGAGAAGTCATCCATTAAACTGTGGGCTAAAGGAGATCTTCCTACCCAGCATATCTTACCTCGGAGGAGGATTGTTATATTCAATACTATGGGTTTGATGGAGGTAGTTTTTAACAGACCTGTTGATATCCTAAGAAAATTGTTTGATGGGAACACTTTGAGATCTCAGTTAGAAGAATTCTTTAGCCGCTTTGGTGCTGGAGAGGCTGCAGCAATGTGCTTAATGCTAGCTGCTAAGCTGCTTTATGCTGAAGATAGCCTGATAAGCAATGCAGTTTCTGAGAAAGCTGCTGAAGCATTTGAGGACCCTGGACTTGTCGGAATGCCTCAAATTGATGGCAGTACTGCCTTGTCTAACACTCGAACTCAGGCTGGAGGCTTTAGTATGGGACAAGTTGTTCAAGAAGCACAACCTATATTTTCTGGTGCATATGAAGGGCTTTGCTTGTGCTCTTCTAGACTACTGTATCCTATCTGGGAACTTCCAATTATGGTGGTTCGAGGACTGGTANGTTCCAATGATCGTGGTGATGGTGTGGTTGTTTGCAGGCTTTCTACTGGGGCCATG ]
[-] EMBL CB668199 [ AAGCAGGGCGTATCATTGGGTCTGGTGGTCATAGCAGTGGGAAGAGTCCATACAGCTCTCGCATTAGAGACGCTGATCCAACAGATCAGTCTGCATCAAATAAAAAGCAAAGGCTGCCTTACACATCAGCCGAACTAGCTGCGATGGAGGTGAGGGCAATTGAGTGCCTTAGGCGGTTGCTTCGAAGATCTGGTGAAGCACTCTTTCTGCTTCAACTTATTTGCCAGCATAATGTTGCTCGCTTGGTTCAGACACTAGGTAATGATTTGCGCAAGAAACTAGTTCAGTTAACATTTCATCAGTTGGTATGTTCTGAGGATGGTGACCAGCTTGCCATGCGCCTTATTTCTGCACTCATGGAGTACTATATCGGTCCAGAGGGCAGGGGAACTGTTGATGAGATCAGCACTAAATTGAGAGAGGGTTGTCCTAGTTACTTCAATGAGTCAGATTATAAATATTACTTAGCAGTGGAATGCCTTGAGAGAGCATCTATGACAAACAATCATGACGAGAAAGACATCCTTGCTAGAGATGCCTTCAATCTTTTAACTAAAATTCCTGACTCTGCTGACTTGAGTGCTATATGCAAGAGATTTGAGAACCTAAGGTTCTACGAGGCAGTAGTCCGTTTGCCTTTACAGAAAGCTCAAGCACTTGATTCCAATGCTGATGTTATTAATGGGCAAATCGACGCAAGGCATCATGATACTATAACTGCACAGCGTGAACAGTGCTATAAAATAGTTATGAATGCTTTACGTACCCTCAAGGGTGTTGGACAGAGTGGCACACAAGGTGCAGACAAGTCATCTGCTTCAGTTACTGCACTGGA ]
[+] EMBL CA765150 [ TGGACAGAGTGGCACACAAGGTGCAGACAAGTCNTCTGCTTCAGTTACTGCACTTGATCCAGCTTCTCGAGGGAAGTATATTAAACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAGGACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGTTGCTTTTCTCCAGAGCGCTGGTCGNAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGTTGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAAGTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAGAATGTTGTTGATATTGGCAGAAAGACAGTGCTCCAATGCGGAAGAAGCTCCAACTCTTGACCAGAGGTATCAATATCTGAGCAGTGCAGCGATTCAGGCCAAAAGTGCAGGCATTACTGCAGATTCTTCAAGGAATCCTATTGATAGCAGCACGATAGATCTACTTGAAGGCAAACTTGCAGTTCTTCGGTTCCAAATGCAAATCAAGCAAGAACTAGAGTTCATGGCTTCACAGCTTGAAAATCTGTCAGGCAGTTCTGAATCACCAAATGATCCCTTTCCTCGNGATAACATTCTAGCTGATGCGGAGACTGCTAGATTTGCCATGGACAAGGCTAAAGAGCTTTCACTGAATCTTAAAGAGTATTACTCAACTTTACAACGATTATGCTG ]
[+] EMBL CB629012 [ TTAAACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAGGACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGTTGCTTTTCTCCAGAGCGCTGGTCGTAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGTTGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAAGTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAGAATGTTGTTG ]
[+] EMBL AK062221 [ GACAGTAAAATTGTTCGAGAAGTTTGGGCCAGGCTTCTTGACCAGGCACTTACAAGAGGTGGTGTTGCAGAAGCATGTTCTGTGGTGAGAAGAGTAGGTTCAAAACTTGATCCTGCAGATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCGAGAAGGCTGCATTGGATAGATTAAGCTCAGGAGAAGAATTAGTTGGTGACGAGGATGTTGCAAGAGCCCTTCTCGGAGCCTGTAAAGGTCTACCTGAACCTGTGCTTGCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGGCTTCTGAGATCAGTTCTTGCAATCCTTCGTGAATGGGGCATGACTGTCATTGCACATAAACTAGGCACCACAACTGCTGGGGCTTCATTCTTTCTTGATGGAACATTTTCGCTGAATCAAACATGGTCTTTAAATCAAGGCGTTCGAGATAAAATAAGTAGTTTGGCAAACCGGTATATGGCTGAGGTGAGGCGGTTAAGCCTTCCAAAGAACCAAACAGAGAATGTCTATCGAGGTTTCCAAGAGCTAGAGGAGAAATTATTAACTAATTAGACATTTCAATTTGTATTCTCGGCACTGTAAAACATGGGTTCGTGCATTTGTTGTACCCAAGTAGAGAGATAAAGCTAAGCCATCCTG ]
consensusID : consensus_10127#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence
[TTTGGGCCAGGCTTCTTGACCAGGCACTTACAACACGTGGTGTTGCACAACCATGTTCTGTGGTGACAACACTACGTTCAAAACTTGATCCTGCACATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCCACAAGCTGCATTGGATACATTAACCTCACGACAACAATTACTTGGTCACCACGATGTTGCAACAGCCCTTCTCGAGCCTGTAAACGTCTACCTGAACCTGTGCTTGCCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGCTTCTGAGATCAGTTCTTTGCAATCCTTCCTTGAATTGGGGCATTACTGTCATTTGCCCATAAACTAGGCCCCACAAACTTGCTTGGGGGCTTCCATTCCTTTC]
[+] EMBL AA754096 [TTTGGGCCAGGCTTCTTGACCAGGCACTTACAACACGTGGTGTTGCACAACCATGTTCTGTGGTGACAACACTACGTTCAAAACTTGATCCTGCACATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCCACAAGCTGCATTGGATACATTAACCTCACGACAACAATTACTTGGTCACCACGATGTTGCAACAGCCCTTCTCGAGCCTGTAAACGTCTACCTGAACCTGTGCTTGCCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGCTTCTGAGATCAGTTCTTTGCAATCCTTCCTTGAATTGGGGCATTACTGTCATTTGCCCATAAACTAGGCCCCACAAACTTGCTTGGGGGCTTCCATTCCTTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10127#0 AAACCCTAGCCCCGCGCCGCTCCATCTCCCACCGGCGCGCGCCGTCGCCGCCGCCGCCGC 60
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CTCCGCCTCCGCCTCGCGCCGTCGCCGCCACTTCCGCCTTCGCCTCCACCTCCGCCTCGT 120
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TTCCCCAACGCGCCACGGCAAAAGCGGGGGAACCCGCGCTGGAAAACTTGAAAAACCCCA 180
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 ACCTAACCCCCTCCCACCCCGCCATTCCTCACATTTGCACCCCCATCGCTGCGCTCTAGG 240
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TTTTTTTTTTTCCTCCGCGCCTTCTCCCCGCAAGAGGCGTATTGCTCCGGCGATGGCTTG 300
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GGCGGAGGACGAGGCGATTGGCCCCGACGTGGCCTCCGCGGGGCTCCACGTCTCGGAGCG 360
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GATCGGCCGCGACGCCGCCGCTCAGCCCGACCTGGAGGAGGCCCTCGAGGCCTCGCGCTA 420
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CGCCTCCCATCCCTACTCCTCGCATCCCAAGGAGTGGCCTCCTTTGGTGGAAGTAGCAGA 480
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AACTAGGCAGTTACCTCCTATGCTGGTTGAAAGATATAATGCCGCTGCTGGTGAAGGAAC 540
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGCTCTTTGTGGAATATTTTCTGAAGTACACCGTGCCTGGGCAACTGTTGACAATTCATT 600
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TTTTATTTGGCGCTTTGATAAGTGGGATGGGCAATGTCAAGAGCATAACGCGGATGAACA 660
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGTGATTTGTGCTGTTGGCCTTGCTAGAGCAAAGCCTGGTGTTTTTGTTGCAGCCATTCA 720
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GTACCTTTTAGTATTAGCAACTCCTGTTGAGCTGATACTTGTCGGAGTTTGCTGTTCAGC 780
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TAGTGGTGATGGAACTGATCCGTATGCGGAGCTCTCATTGCAACCTTTACCTGAGTACAT 840
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TATTTCTACTGATGGTGTCACAATGACATGCATCACTTGTACAGATAAGGGTCAAATTTT 900
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CCTATCTGGGCGTGATGGCCATATATATGAGCTGCAATATACAACTGGTTCAGGTTGGCG 960
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AAAGCGCTGCCGTAAAGTTTGCCTTACTACTGGTTTAGGCAGCCTTCTTTCCAGGTGGGT 1020
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TTTGCCAAATGCATTCAAGTTCTCGGCTGTTGATCCTATTGTTGATATGGTTATTGATGA 1080
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GGAGAGAAATACAATTTATGCGCGCACAGAAGGCATGAAGATGCAGCTATTTGATTTAGG 1140
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGCTACTGGCGATGGTCCTCTGAGAAAGATCACTGAAGAAAAGAATCTTGTTGATCCACG 1200
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGATGCACCTTATGGCAGTCGGAGGCCTAATGCACAAAGAGCTGCACGATCCCCAAAACC 1260
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 ATCAATTGTCTGCATTGCACCTTTGTCAGCTATGGAATCAAAATGGCTTCATGCTGTTGC 1320
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGTTTTATCAGATGGCAAGAGACTGTTCCTTTCTACATCAGGTGGGAGTAGTTCAGTTGG 1380
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 ACTTAGCACTGGTTTGCAGAGGCCAAGCTGTCTAAAAATTGTTGCTACCAGGCCTTCCCC 1440
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 ACCTCTAGGGGTTGGTGGTGGTCTCACATTTGGTGCTGTTTCAGCTGCTGGCAGAGCTCA 1500
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 ACCTGAGGATCTTGCTTTAAAAGTGGAGTCAGCTTTCTATTCTGCCGGTGCTCTTATAAT 1560
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GTCAGATTCATCTGCTACAGCTATGTCCTCCCTTCTCGCTGTGCAGAAAGATTCAGCTGC 1620
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CCAATTATCCCTTCCCAGTACTTTTGGGACAGCATCTAGAAGCTCGAGGGCTCTGCGAGA 1680
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AACAGTCTCTGCTTTGCCTGTTGAAGGTCGGATGCTTTGTGCCTCTGATGTCTTCCCGCT 1740
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TCCAGATGCTGCTTTCATCATGCAGTCATTATATGCAGACGTGGAATGCTTTGCATCTTT 1800
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGGAAAACCTTCTGAGAAGTCATCCATTAAACTGTGGGCTAAAGGAGATCTTCCTACCCA 1860
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GCATATCTTACCTCGGAGGAGGATTGTTATATTCAATACTATGGGTTTGATGGAGGTAGT 1920
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TTTTAACAGACCTGTTGATATCCTAAGAAAATTGTTTGATGGGAACACTTTGAGATCTCA 1980
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GTTAGAAGAATTCTTTAGCCGCTTTGGTGCTGGAGAGGCTGCAGCAATGTGCTTAATGCT 2040
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGCTGCTAAGCTGCTTTATGCTGAAGATAGCCTGATAAGCAATGCAGTTTCTGAGAAAGC 2100
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGCTGAAGCATTTGAGGACCCTGGACTTGTCGGAATGCCTCAAATTGATGGCAGTACTGC 2160
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CTTGTCTAACACTCGAACTCAGGCTGGAGGCTTTAGTATGGGACAAGTTGTTCAAGAAGC 2220
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 ACAACCTATATTTTCTGGTGCATATGAAGGGCTTTGCTTGTGCTCTTCTAGACTACTGTA 2280
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TCCTATCTGGGAACTTCCAATTATGGTGGTTCGAGGACTGGTAGGTTCCAATGATCGTGG 2340
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGATGGTGTGGTTGTTTGCAGGCTTTCTACTGGGGCCATGAAGGTTCTTGAGAGTAAGAT 2400
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CCGTTCATTGGAAACATTTTTGAGGTCAAGAAGAAACAAAAGAAGAGGACTTTATGGTTA 2460
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGTTGCTGGTCTAGGAGATTCTGGTTCCATACTGTACAAAGCAGGGCCTATCATTGGGTC 2520
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGGTGGTCATAGCAGTGGGAAGAGTCCATACAGCTCTCGCATTAGAGACGCTGATCCAAC 2580
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGATCAGTCTGCATCAAATAAAAAGCAAAGGCTGCCTTACACATCAGCCGAACTAGCTGC 2640
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GATGGAGGTGAGGGCAATTGAGTGCCTTAGGCGGTTGCTTCGAAGATCTGGTGAAGCACT 2700
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CTTTCTGCTTCAACTTATTTGCCAGCATAATGTTGCTCGCTTGGTTCAGACACTAGGTAA 2760
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGATTTGCGCAAGAAACTAGTTCAGTTAACATTTCATCAGTTGGTATGTTCTGAGGATGG 2820
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGACCAGCTTGCCATGCGCCTTATTTCTGCACTCATGGAGTACTATATCGGTCCAGAGGG 2880
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CAGGGGAACTGTTGATGAGATCAGCACTAAATTGGGAGAGGGTTGTCCTAGTTACTTCAA 2940
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGAGTCAGATTATAAATATTACTTAGCAGTGGAATGCCTTGAGAGAGCATCTATGACAAA 3000
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CAATCATGACGAGAAAGACATCCTTGCTAGAGATGCCTTCAATCTTTTAACTAAAATTCC 3060
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGACTCTGCTGACTTGAGTGCTATATGCAAGAGATTTGAGAACCTAAGGTTCTACGAGGC 3120
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGTAGTCCGTTTGCCTTTACAGAAAGCTCAAGCACTTGATTCCAATGCTGATGTTATTAA 3180
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGGGCAAATCGACGCAAGGCATCATGATACTATAACTGCACAGCGTGAACAGTGCTATAA 3240
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AATAGTTATGAATGCTTTACGTACCCTCAAGGGTGTTGGACAGAGTGGCACACAAGGTGC 3300
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGACAAGTCATCTGCTTCAGTTACTGCACTTGATCCAGCTTCTCGAGGGAAGTATATTAA 3360
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 ACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAG 3420
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGT 3480
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGCTTTTCTCCAGAGCGCTGGTCGTAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGT 3540
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAA 3600
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAG 3660
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AATGTTGTTGATATTGGCAGAAAGACAGTGCTCCAGTGCGGAAGAAGCTCCAACTCTTGA 3720
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 CCAGAGGTATCAATATCTGAGCAGTGCAGCGATTCAGGCCAAAAGTGCAGGCATTACTGC 3780
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGATTCTTCGAGGAATCCTATTGATAGCAGCACGATAGATCTACTTGAAGGCAAACTTGC 3840
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AGTTCTTCGGTTCCAAATGCAAATCAAGCAAGAACTAGAGTTCATGGCTTCACAGCTTGA 3900
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AAATCTGTCAGGCAGTTCTGAATCACCAAATGATCCCTTTCCTCGTGATAACATTCTAGC 3960
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGATGCGGATACTGCTAGATTTGCCATGGACAAGGCTAAAGAGCTTTCACTGAATCTAAA 4020
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GAGTATTACTCAACTTTACAACGATTATGCTGTTCCATTTAATCTTTGGGAGGTTTGCCT 4080
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 GGAAATGCTCAACTTTGCAAATTATTCTGGAGATGCTGACAGTAAAATTGTTCGAGAAAT 4140
consensus_10127#1 -----------------------------------------------------------T 1
*
consensus_10127#0 TTGGGCCAGGCTTCTTGACCAGGCACTTACAAGAGGTGGTGTTGCAGAAGCATGTTCTGT 4200
consensus_10127#1 TTGGGCCAGGCTTCTTGACCAGGCACTTACAACACGTGGTGTTGCACAACCATGTTCTGT 61
******************************** * *********** ** **********
consensus_10127#0 GGTGAGAAGAGTAGGTTCAAAACTTGATCCTGCAGATGGCGCTTGTTTACCATTGGATAT 4260
consensus_10127#1 GGTGACAACACTACGTTCAAAACTTGATCCTGCACATGGCGCTTGTTTACCATTGGATAT 121
***** ** * ** ******************** *************************
consensus_10127#0 AATATGCCTTCATCTCGAGAAGGCTGCATTGGATAGATTAAGCTCAGGAGAAGAATTAGT 4320
consensus_10127#1 AATATGCCTTCATCTCCACAAG-CTGCATTGGATACATTAACCTCACGACAACAATTACT 180
**************** * *** ************ ***** **** ** ** ***** *
consensus_10127#0 TGGTGACGAGGATGTTGCAAGAGCCCTTCTCGGAGCCTGTAAAGGTCTACCTGAACCTGT 4380
consensus_10127#1 TGGTCACCACGATGTTGCAACAGCCCTTCTCG-AGCCTGTAAACGTCTACCTGAACCTGT 239
**** ** * ********** *********** ********** ****************
consensus_10127#0 GCTTGCC-GTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGA 4439
consensus_10127#1 GCTTGCCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGA 299
******* ****************************************************
consensus_10127#0 AGCTGCGGCTTCTGAGATCAGTTCTT-GCAATCCTTCGTGAA--TGGGGCATGACTGTCA 4496
consensus_10127#1 AGCTGCG-CTTCTGAGATCAGTTCTTTGCAATCCTTCCTTGAATTGGGGCATTACTGTCA 358
******* ****************** ********** * * ******** *******
consensus_10127#0 TT-GCACATAAACTAGGCACCACAA--CTGCT--GGGGCTTC-ATTCTTTCTTGATGGAA 4550
consensus_10127#1 TTTGCCCATAAACTAGGCCCCACAAACTTGCTTGGGGGCTTCCATTCCTTTC-------- 410
** ** ************ ****** **** ******** **** **
consensus_10127#0 CATTTTCGCTGAATCAAACATGGTCTTTAAATCAAGGCGTTCGAGATAAAATAAGTAGTT 4610
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TGGCAAACCGGTATATGGCTGAGGTGAGGCGGTTAAGCCTTCCAAAGAACCAAACAGAGA 4670
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 ATGTCTATCGAGGTTTCCAAGAGCTAGAGGAGAAATTATTAACTAATTAGACATTTCAAT 4730
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 TTGTATTCTCGGCACTGTAAAACATGGGTTCGTGCATTTGTTGTACCCAAGTAGAGAGAT 4790
consensus_10127#1 ------------------------------------------------------------
consensus_10127#0 AAAGCTAAGCCATCCTGGTTCA 4812
consensus_10127#1 ----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||