These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10131#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1569 fasta sequence [CACTACAACACAAAAAGCGAGAGAGATCTCTCCCGAGCTCGATCCGGTCCACCGCGACACGAAGACGACCATGGCGATGGCTCGCTCCCAGCTTGCCGCCGTGTTCCTCGCCGTCCTCGTCTCGGTGGCGCCGCTCGCCGGCGCGGCGGACAACCTCCAGGACGCGTGCAACCGGACGCTGTTCCCCAAGGTGTGCATCCAGGCGCTGACGACGAACCCGGAGAGCCGGACGGCGAACGCGCGGCGGCTGGCGGAGCTGTCGGTGTACGTGGCGGCGGAGGTGGGCACGGCGGTGGCGGCGTTCGCGCACCACGAGC-TGAACGGCGTGAAGGAGGACGCCCTGTTCAAGTGCGTGGACAGCTGC-TCCGACGACA-TCGAGGAGGCGGTGGCGCACCTCAGCGCGCTCA-CCCGCG-AGCTCACCGACGCCAAGTTCCTCGAGGTCAAGGCCTGGCTCTCCGCCACGCTCGGCGGCTCCTCCACCTGCGAGGACACCTGCAAGGACGCCCCCATCAGCGAGATCAAGAACGCCGTCGTCACCAAGAGCCTCGAGTTCGAGAAGCTCCTCCGCGTCACGCTCGACCTCATCACCGAGGCCTCCGGCTCCATGTCCGCCGACGTCGCCCTCCCGCCCGCCACCGGCGGCGGCGGCGGCGGCTATGGCTATGAATCCAGCAGCGCCGCCGCCGCGCCGGCGCCTTCCGAGTCCGACTCCGACGTCGGCTCCGGCTCAGGCTCCGCCGCCAGCGCGCCGGGCCCGAGCCCATCCGACGACACCGGCTACGGCGGCTCCTCCGGCAGCCCATCCAGCAGCCCATCCAGCAGCCCCTCCAGCAGCCCCTCCGGCAGCCCCTCCAGCAGCCCCTCCGGCAGCCCCTCCGGCAGCCCCGCCGGCAGCCCCGCCGGCGGCCCCACCGCCGGCGGCCCTGCATCTGGACCGTCGTCGTACGGCGCCGCCTCTGGCCCCGCCGAAGGGCCGTCGTCGTCCGGCGCCGCCTCTGGCCCCGCCGAAGGGCCGTCGCCGTCCGGCGCCGCCGGCCCCGCCGAAGGGCCCTCGTCGTACGGCTCCACCGAAGGGCCGTCTCCATCGCCGTCGTCGTCCGGCTCCGCCGACGCGCCGGGACCCGGCGCCAGCGCACCGGATTCCGAGGAGTACTGAGCGACGTACGGCGCATGCATGGCTACACAGATTTTTCCTTCTTCATATCACCATTTCTTTTTCTCCAGTCTTCTTTGAACTAATCCGTTGACACTAGCGAAGATTATGATGGGTTGATCATTAAGCCTACGTAGAAAATCCATTGACATAATTATTACAATGGTGTATGGGGAAAAGGGGAAAAATATTAGTATGGTTTATGAGGATTATTTCGGATCAAGAAATGAGGCCCATATAGGAGAGATGGCATGTGGCCCCAAATGGGAGATTTTTATTTTATTTTATTTTTTTGGGAAAAGGAGATTTTTTTTATTATTATTGTAATATTGTTATATGTTGTATTGGTTTTCTTTGATGAAATTATATCTGTTNTAAGNGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK072232 [CACTACAACACAAAAAGCGAGAGAGATCTCTCCCGAGCTCGATCCGGTCCACCGCGACACGAAGACGACCATGGCGATGGCTCGCTCCCAGCTTGCCGCCGTGTTCCTCGCCGTCCTCGTCTCGGTGGCGCCGCTCGCCGGCGCGGCGGACAACCTCCAGGACGCGTGCAACCGGACGCTGTTCCCCAAGGTGTGCATCCAGGCGCTGACGACGAACCCGGAGAGCCGGACGGCGAACGCGCGGCGGCTGGCGGAGCTGTCGGTGTACGTGGCGGCGGAGGTGGGCACGGCGGTGGCGGCGTTCGCGCACCACGAGC TGAACGGCGTGAAGGAGGACGCCCTGTTCAAGTGCGTGGACAGCTGC TCCGACGACA TCGAGGAGGCGGTGGCGCACCTCAGCGCGCTCA CCCGCG AGCTCACCGACGCCAAGTTCCTCGAGGTCAAGGCCTGGCTCTCCGCCACGCTCGGCGGCTCCTCCACCTGCGAGGACACCTGCAAGGACGCCCCCATCAGCGAGATCAAGAACGCCGTCGTCACCAAGAGCCTCGAGTTCGAGAAGCTCCTCCGCGTCACGCTCGACCTCATCACCGAGGCCTCCGGCTCCATGTCCGCCGACGTCGCCCTCCCGCCCGCCACCGGCGGCGGCGGCGGCGGCTATGGCTATGAATCCAGCAGCGCCGCCGCCGCGCCGGCGCCTTCCGAGTCCGACTCCGACGTCGGCTCCGGCTCAGGCTCCGCCGCCAGCGCGCCGGGCCCGAGCCCATCCGACGACACCGGCTACGGCGGCTCCTCCGGCAGCCCATCCAGCAGCCCATCCAGCAGCCCCTCCAGCAGCCCCTCCGGCAGCCCCTCCAGCAGCCCCTCCGGCAGCCCCTCCGGCAGCCCCGCCGGCAGCCCCGCCGGCGGCCCCACCGCCGGCGGCCCTGCATCTGGACCGTCGTCGTACGGCGCCGCCTCTGGCCCCGCCGAAGGGCCGTCGTCGTCCGGCGCCGCCTCTGGCCCCGCCGAAGGGCCGTCGCCGTCCGGCGCCGCCGGCCCCGCCGAAGGGCCCTCGTCGTACGGCTCCACCGAAGGGCCGTCTCCATCGCCGTCGTCGTCCGGCTCCGCCGACGCGCCGGGACCCGGCGCCAGCGCACCGGATTCCGAGGAGTACTGAGCGACGTACGGCGCATGCATGGCTACACAGATTTTTCCTTCTTCATATCACCATTTCTTTTTCTCCAGTCTTCTTTGAACTAATCCGTTGACACTAGCGAAGATTATGATGGGTTGATCATTAAGCCTACGTAGAAAATCCATTGACATAATTATTACAATGGTGTATGGGGAAAAGGGGAAAAATATTAGTATGGTTTATGAGGATTATTTCGGATCAAGAAATGAGGCCCATATAGGAGAGATGGCATGTGGCCCCAAATGGGAGATTTTTATTTTATTTTATTTTTTTGGGAAAAGGAGATTTTTTTTATTATTATTGTAATATTGTTATATGTTGTATTGGTTTTCTTTGATGAAATTATATCTGT ] [+] EMBL AK099091 [CACTACAACACAAAAAGCGAGAGAGATCTCTCCCGAGCTCGATCCGGTCCACCGCGACACGAAGACGACCATGGCGATGGCTCGCTCCCAGCTTGCCGCCGTGTTCCTCGCCGTCCTCGTCTCGGTGGCGCCGCTCGCCGGCGCGGCGGACAACCTCCAGGACGCGTGCAACCGGACGCTGTTCCCCAAGGTGTGCATCCAGGCGCTGACGACGAACCCGGAGAGCCGGACGGCGAACGCGCGGCGGCTGGCGGAGCTGTCGGTGTACGTGGCGGCGGAGGTGGGCACGGCGGTGGCGGCGTTCGCGCACCACGAGC TGAACGGCGTGAAGGAGGACGCCCTGTTCAAGTGCGTGGACAGCTGC TCCGACGACA TCGAGGAGGCGGTGGCGCACCTCAGCGCGCTCA CCCGCG AGCTCACCGACGCCAAGTTCCTCGAGGTCAAGGCCTGGCTCTCCGCCACGCTCGGCGGCTCCTCCACCTGCGAGGACACCTGCAAGGACGCCCCCATCAGCGAGATCAAGAACGCCGTCGTCACCAAGAGCCTCGAGTTCGAGAAGCTCCTCCGCGTCACGCTCGACCTCATCACCGAGGCCTCCGGCTCCATGTCCGCCGACGTCGCCCTCCCGCCCGCCACCGGCGGCGGCGGCGGCGGCTATGGCTATGAATCCAGCAGCGCCGCCGCCGCGCCGGCGCCTTCCGAGTCCGACTCCGACGTCGGCTCCGGCTCAGGCTCCGCCGCCAGCGCGCCGGGCCCGAGCCCATCCGACGACACCGGCTACGGCGGCTCCTCCGGCAGCCCATCCAGCAGCCCATCCAGCAGCCCCTCCAGCAGCCCCTCCGGCAGCCCCTCCAGCAGCCCCTCCGGCAGCCCCTCCGGCAGCCCCGCCGGCAGCCCCGCCGGCGGCCCCACCGCCGGCGGCCCTGCATCTGGACCGTCGTCGTACGGCGCCGCCTCTGGCCCCGCCGAAGGGCCGTCGTCGTCCGGCGCCGCCTCTGGCCCCGCCGAAGGGCCGTCGCCGTCCGGCGCCGCCGGCCCCGCCGAAGGGCCCTCGTCGTACGGCTCCACCGAAGGGCCGTCTCCATCGCCGTCGTCGTCCGGCTCCGCCGACGCGCCGGGACCCGGCGCCAGCGCACCGGATTCCGAGGAGTACTGAGCGACGTACGGCGCATGCATGGCTACACAGATTTTTCCTTCTTCATATCACCATTTCTTTTTCTCCAGTCTTCTTTGAA TAATCCGTTGACACTAGCGAAGATTATGATGGGTTGATCATTAAGCCTACGTAGAAAATCCATTGACATAATTATTACAATGGTGTATGGGGAAAAGGGGAAAAATATTAGTATGGTTTATGAGGATTATTTCGGATCAAGAAATGAGGCCCATATAGGAGAGATGGCATGTGGCCCCAAATGGGAGATTTTTATTTTATTTTATTTTTTTGGGAAAAGGAGATTTTTTTTATTATTATTGTAATATTGTTATATGTTGTATTGGTTTTCTTTGATGAAATTATATCTGT ] [+] EMBL AU163567 [ CGAGAGAGATCTCTCCCGAGCTCGATCAGGTCAACCGCGACACGAAGACGACNATGGCGATGGCTCGCTCCCAGCTTGCCGCCGTGTTCCTCGCCGTCCTCGTCTCGGTGGCGCCGCTCGCCGGCGCGGCGGACAGCCTCCAGGACGCGTGCANCCGGACGCTGTTCCCCAAGGTGTGCATCCAGGCGCTGACGACGAACCCGGAGAGCCGGACGGCNAACGCGCGGCGGCTGGCGGANTTGTCGGTGTACGTGGCGGCGGAGGTGGGCACGGCGGTGGCGGCGTTCGCGCACCACGAGC TGAACGGCGTGAAGGAGGACGCCCTGTTCAAGTGCGTGGACAGCTNCTTCCGACGACA TCGAGGAGGCGGTTGCGAACCTNAGCGCGTTTANCCCGCGAAGTTNAACGACGCCAAGTTCCTNGAGGTAAAGNCTTGttt ] [+] EMBL AU182383 [ GAGAGAGATCTCTCCCGAGCTCGATCCGGTCCACCGCGACACGAAGACGACCATGGCGATGGCTCGCTCCCAGCTTGCCGCCGTGTTCCTCGCCGTCCTCGTCTCGGTGGCGCCGCTCGCCGGCGCGGCGGACAACCTCCAGGACGCGTGCAACCGGACGCTGTTCCCCAAGGTGTGCATCCAGGCGCTGACGACGAACCCGGAGAGCCGGACGGCGAACGCGCGGCGGCTGGCGGAGCTGTCGGTGTACGTGGCGGCGGAGGTGGGCACGGCGGTGGCGGCGTTCGCGCACCACGAGC TGAACGGCGTGAAGGAGGACGCCCTGTTCAAGTGCGTGGACAGCTGC TCCGACGACA TCGAGGAGGCGGTGGCGCACCTCAGCGCGCTCA CCCGCG AGCTCACCGACGCCAAGTTCCTCGAGGTCAAG ] [+] EMBL AU163560 [ AGAGAGATCTCTCCCGAGCTCGATCCGGTCCACCGCGACACGAAGACGACCATGGCGATGGCTCGCTCCCAGCTTGCCGCCGTGTTCCTCGCCGTCCTCGTCTCGGTGGCGCCGCTCGCCGGCGCGGCGGACAACCTCCAGGACGCGTGCAACCGGACGCTGTTCCCCAAGGTGTGCATCCAGGCGCTGACGACGAACCCGGAGAGCCGGACGGCGAACGCGCGGCGGCTGGCGGANTTGTCGGTGTACGTGGCGGCGGAGGTGGGCACGGCGGTGGCGGCGTTCGCGCACCACGAGCTTGAACGGCGTGAAGGAGGACGNCCTGTTCAAGTGCGTTGACAACTTCTTCCGACGACANTCGAGGAGGCGTTTGCGAACttaacg ] [+] EMBL C72768 [ GAGAGATCTCTCCCGAGCTCGATCCGGTCCACCGCGACACGAAGACGACCATGGCGATGGCTCGCTCCCAGCTTGCCGCCGTGTTCCTCGCCGTCCTCGTCTCGGTGGCGCCGCTCGCCGGCNCGGCGGACAACCTCCAGGACGCGTGCAACCGGACGCTGTTCCCCAAGGTGTGCATCCAGGCGCTGACGACGAACCCGGAGAGCCGGACGGCAAACGCGCGGCGGCTGGCGGA NTGTCGGTGTACGTGGCGGCGGAGGTGGGCACGGCGGTGGCGGCGTTCGCGCACCACGAGC TGAACGGCGTGAAGGAGGACG CCTGT ] [+] EMBL AU182384 [ TATGATGGGTTGATCATTAAGCCTACGTANAAAATCCATTGACATAATTATTCCAATGGNGTATGGGGAAAAGGGGAAAAATATTAGTATGGTTTATGAGGATTATTTNGGATCAANAAATNAGGCCCATATAGGANANATGGCATGTGGCCCCAAATGGGAGATTTTTATTTTATTTTATTTTTTTGGGAAAAGGANATTTTTTTTATTATTATTGTAANATTGTTATATGTTGNATTGGTTTTCTTTGATGAAATTANATCTGTTNTAAGNGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||