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Oryza sativa
cluster # 10132 cluster # 10132       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10132#0 length = 2319 sequences # 4  
consensus_10132#1 length = 343 sequences # 1  
consensus_10132#2 length = 292 sequences # 2  

consensusID : consensus_10132#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2319
fasta sequence
                              [GTACTACAACCCTAGCAGTCAGCTCTGCTTTCCCCAACGCGTTCTCAACCCTACTCCATCCCACTTCGTTGTCATCTCTGATGAATCTTTTCTCTCCTGCTGCAGGCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAATCCTTACGAAGCCAAAATTTCGCAGAGAGGAGGATATCTGTTTGAGGAAAAAAAGGACGGGGTCTCCCTTCCTGCAACAGAACCGCGTGATGATGTTACCGTTTGATGTGACGTACCTTAGTTTGTACGCGAGATTCAACAAGATGAAGGGGCCGGTGGGCAAGGCGTCACTTATTTGCGGAGGAAAGGAAACCCATGATGCCAAAATTTTGCAGATAGGAGATGGAGGAGATTCAGTTCATTGTGTGCAAAAAAGACGACTGATCTCCCCCTGCAAATGTGTACGGAGGAAGCCTATGATTGGTATTACAACTCGTATTGATGAGCACTACACCATGGTGTTTTTCGAGATCCCGGCGAGCGTGGATTCAGCACAAGGCCCAATCTTTCTTTGGAACAGTTGAGTGTTGGCCCTGGGGACACTGCGGACTTACTGCGGAAAGTACTTCCAGGCATTCGTGATGCAAGTAAGACCTTTGCTATCCCTGCGTTGAAGCAAGTGTTTGAGGACAGCATTCGTCCACTACTTGTTTCAAAGTGTTTACTCATTCACCAGCCTCTTGATAAATCCATGAAAACTTTCAACCAAAGAACAAATAACCTGTTGAAGAAGTCTCCACGCTACCTCAGTGCCCTAGATGTGACCACAGAAAAGGAAATCCTGCTGGAAGATGAATGGACTTTGTTCCTTGAGCACATCTTTAAACATAGGGTCATTGTTGTAGATGATTGGACAAAGTGCTACGGGACCGTTCAGACCTTCCTCCACTCGAGTGATGCTGAATCATGCAGTGATTCTTTCAAGGGGGAGTGTGATGCTTCATTCTGTGAGCAAACTGGAAAGGCAAAACTTGCCTTTGTCATCTTTAAAGAGGGTAAACTTGTCTGGGCTGAGGTTTTCCATGAGGTACCTTGCAAGAGTGTTGTGGAGGCAGAGGCTTTGGCAGTCATAGCTCTCCTCTTCAAGCTTATTGACCTTAACTTGTTAAGAGGGACTGTTTGGACCGACAACAAGGTCTGTTATAATGTGCTGAATGGTGAATATGAGATAAAGGTTGATGATCCCAACAGGTCGCTGTTTCTGTTTCTGAGGAGTTTGAGAGGTCGCTTTGAGTCCTTGACCCCGGTCTGGAAACCCAGAGAACTACTGCTGATCCCAGATCGTCTGGTTAGTATGGTTGATGACCCCCTGATATCAAGGAATAGATTGGTACTCAGTATACTGGAAAAAACAGTTCCAATTCTTAGTCAGCCGCAGTTCAGGATATCATGGAGCAGCTATCTGGGAACAATTTTTGACAAACGTGATGGTGGAAAACAAATTTCTAACACAACAAATGAAATTAAGGAATCAGATGAATCCGAGGATTCAATCTGTTGGGTTAAGGCTGATGATGAAGAAGCTGAAATTGCTTCCTTTCTTGAAATTATGAAAACTTTTTCAGCCCATCGCTTGCTTATTGTGGTTGACAACTTTGAAGACAAATCTCCTCATTATCAAAAGTTAATTAAGGATCTCTCTCAAAAGTTTTACACGTGTTGGATGAGTAAAGAAGGCAGTGTCACAATTGTGGAGTATGACTCTCCTAACACTGAAGAGAAAGAGACCAAAAGATTGGTGGTTATGTTTGGTGGGACAATGGCACTGGATGAATATATCCACCAAAAAAATCTCTGTACAGTTGTTTTGGTGAAGACATCTGAGATTAAGCTGCTAAGAGATGCTGGAATCGAAGAAATAAGTGCTAAGACACTTCTGAGTTTTCGCAACATCAAAGCAAAACCAGTTGTGCCAAAGAAACCTCGGGAGGATGAGGATCTAGAGAAGGGGGGGGGGGGGGGGGGGGAGGGCAGGTGGTGAATAGGATGAGGAGAGGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACTTCAGTCTTTTGCATGATTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTTTGATACTTTGATGCATCGTTGAGACAGTTTTTTTTGTACCTGAATCATGATGTTCATGTCACAACCGTACGTGATGCTCAAGTAATCTTATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAGGTGGACAACTCACTGGACTTCAGTCTTTTGCATGATTCCTTGCGACGGC]

[+] EMBL AK067852             [GTACTACAACCCTAGCAGTCAGCTCTGCTTTCCCCAACGCGTTCTCAACCCTACTCCATCCCACTTCGTTGTCATCTCTGATGAATCTTTTCTCTCCTGCTGCAGGCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAATCCTTACGAAGCCAAAATTTCGCAGAGAGGAGGATATCTGTTTGAGGAAAAAAAGGACGGGGTCTCCCTTCCTGCAACAGAACCGCGTGATGATGTTACCGTTTGATGTGACGTACCTTAGTTTGTACGCGAGATTCAACAAGATGAAGGGGCCGGTGGGCAAGGCGTCACTTATTTGCGGAGGAAAGGAAACCCATGATGCCAAAATTTTGCAGATAGGAGATGGAGGAGATTCAGTTCATTGTGTGCAAAAAAGACGACTGATCTCCCCCTGCAAATGTGTACGGAGGAAGCCTATGATTGGTATTACAACTCGTATTGATGAGCACTACACCATGGTGTTTTTCGAGATCCCGGCGAGCGTGGATTCAGCACAAGGCCCAATCTTTCTTTGGAACAGTTGAGTGTTGGCCCTGGGGACACTGCGGACTTACTGCGGAAAGTACTTCCAGGCATTCGTGATGCAAGTAAGACCTTTGCTATCCCTGCGTTGAAGCAAGTGTTTGAGGACAGCATTCGTCCACTACTTGTTTCAAAGTGTTTACTCATTCACCAGCCTCTTGATAAATCCATGAAAACTTTCAACCAAAGAACAAATAACCTGTTGAAGAAGTCTCCACGCTACCTCAGTGCCCTAGATGTGACCACAGAAAAGGAAATCCTGCTGGAAGATGAATGGACTTTGTTCCTTGAGCACATCTTTAAACATAGGGTCATTGTTGTAGATGATTGGACAAAGTGCTACGGGACCGTTCAGACCTTCCTCCACTCGAGTGATGCTGAATCATGCAGTGATTCTTTCAAGGGGGAGTGTGATGCTTCATTCTGTGAGCAAACTGGAAAGGCAAAACTTGCCTTTGTCATCTTTAAAGAGGGTAAACTTGTCTGGGCTGAGGTTTTCCATGAGGTACCTTGCAAGAGTGTTGTGGAGGCAGAGGCTTTGGCAGTCATAGCTCTCCTCTTCAAGCTTATTGACCTTAACTTGTTAAGAGGGACTGTTTGGACCGACAACAAGGTCTGTTATAATGTGCTGAATGGTGAATATGAGATAAAGGTTGATGATCCCAACAGGTCGCTGTTTCTGTTTCTGAGGAGTTTGAGAGGTCGCTTTGAGTCCTTGACCCCGGTCTGGAAACCCAGAGAACTACTGCTGATCCCAGATCGTCTGGTTAGTATGGTTGATGACCCCCTGATATCAAGGAATAGATTGGTACTCAGTATACTGGAAAAAACAGTTCCAATTCTTAGTCAGCCGCAGTTCAGGATATCATGGAGCAGCTATCTGGGAACAATTTTTGACAAACGTGATGGTGGAAAACAAATTTCTAACACAACAAATGAAATTAAGGAATCAGATGAATCCGAGGATTCAATCTGTTGGGTTAAGGCTGATGATGAAGAAGCTGAAATTGCTTCCTTTCTTGAAATTATGAAAACTTTTTCAGCCCATCGCTTGCTTATTGTGGTTGACAACTTTGAAGACAAATCTCCTCATTATCAAAAGTTAATTAAGGATCTCTCTCAAAAGTTTTACACGTGTTGGATGAGTAAAGAAGGCAGTGTCACAATTGTGGAGTATGACTCTCCTAACACTGAAGAGAAAGAGACCAAAAGATTGGTGGTTATGTTTGGTGGGACAATGGCACTGGATGAATATATCCACCAAAAAAATCTCTGTACAGTTGTTTTGGTGAAGACATCTGAGATTAAGCTGCTAAGAGATGCTGGAATCGAAGAAATAAGTGCTAAGACACTTCTGAGTTTTCGCAACATCAAAGCAAAACCAGTTGTGCCAAAGAAACCTCGGGAGGATGAGGATCTAGAGAAGGGGGGGGGGGGGGGGGGGGAGGGCAGGTGGTGAATAGGATGAGGAGAGGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACTTCAGTCTTTTGCATGATTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTTTGATACTTTGATGCATCGTTGAGACAGTTTTTTTTGTACCTGAATCATGATGTTCATGTCACAACCGTACGTGATGCTCAAGTAATCTTATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAGGTGGACAACTCACTGGACTTCAGTCTTTTGCATGATTCCTTGCGACGGC]
[+] EMBL CB640806             [           taacccGTCGGATGTGCTTTGCCCAACGCGTTCTCAACCCTACTCCATCCCACTTGGTTGTCATCTCTGATGAATCTTTTCTCTCCTGCTGCATGCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAATCCTTACGAAGCCAAAATTTCGCAGAGAGGAGGATATCTGTTTGAGGAAAAAAAGGACGGGGTCTCCCTTCCTGCAACAGAACCGCGTGATGATGTTACCGTTTGATGTGACGTACCTTAGTTCGTACGCGAGATTCAACAAGATGAATGGGCCGGCGGGCAATGCGTCACTTATCTGCGGAGGAAAGGAAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB637192             [                          GCTTTCCCC ACGCGTTCTCAACCCTACTCCATCCCACTTCGTTGTCATCTCTGATGAATCTTTTCTCTCCTGCTGCACGCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAATCCTTACTAAGCCAAAATTTCGCACAGAGGAGGATATCTGTTTGAGGAAAAAAAGGACGGGGTCTCCCTTCCTGCAACAGAACCGCGTGATGATGTTACCGTTTGATGTGACGTACCTTAGTTTGTACGCGAGATTCAACAACATGAACGGGCCGGTGGGCAAGGCGTCACTTATTTGCGGAGGAAAGGAAACCCATGATGCCAAAATTTTGCAGATAGGAGATGGACGAGATTCAGCTCATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB645218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGAGCTTTCGGAGAGCGTGGATTCAGCACAAGGCCCAATCTTTCTTTGGAACAGTTGAGTGTTGGCCCTGGGGACACTGCGGACTTACTGCGGAAAGTACTTCCAGGCATTCGTGATGCAAGTAAGACCTTTGCTATCCCTGCGTTGAAGCAAGTGTTTGAGGACAGCATTCGTCCACTACTTGTTTCAAAGTGTTTACTCATTCACCAGCCTCTTGATAAATCCATGAAAACTTTCAACCAAAGAACAAATAACCTGTTGAAGAAGTCTCCACGCTACCTCAGTGCCCTAGATGTGACCACAGAAAAGGAAATCCTGCTGGAAGATGAATGGACTTTGTTCCTTGAGCACATCTTTAAACATAGGGTCATTGTTGTAGATGATTGGACAAAGTGCTACGGGACCGTTCAGACCTTCCTCCACTCGAGTGATGCTGAATCATGCAGTGATTCTTTCAAGGGGGAGTGTGATGCTTCATTCTGTGAGCAAACTGGAAAGGCAAAACTTGCCTTTGTCATCTTTAAAGAGGGTAAACTTGTCTGGGCTGAGGTTTTCCATGAGGTACCTTGCAAGAGTGTTGTGGAGGCAGAGGCTTTGGCAGTCATAGCTCTCCTCTTCAAGCTTATTGACCTTAACTTGTTAAGAGGGACTGTTTGGACCGACAACAAGGTCTGTTATAATGTGCTGAATGGTGAATATGAGATAAAGGTTGATGATCCCAACAGGTCGCTGTTTCTGTTTCTGAGGAGTTTGAGAGGTCGCTTTGAGTCCTTGACCCCGGTCTGGAAACCCAGAGAACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_10132#0 GTACTACAACCCTAGCAGTCAGCTCTGCTTTCCCCAACGCGTTCTCAACCCTACTCCATC CCACTTCGTTGTCATCTCTGATGAATCTTTTCTCTCCTGCTGCAGGCTGCGTGTGCGCGG AGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAATCCTTACGAAG CCAAAATTTCGCAGAGAGGAGGATATCTGTTTGAGGAAAAAAAGGACGGGGTCTCCCTTC CTGCAACAGAACCGCGTGATGATGTTACCGTTTGATGTGACGTACCTTAGTTTGTACGCG AGATTCAACAAGATGAAGGGGCCGGTGGGCAAGGCGTCACTTATTTGCGGAGGAAAGGAA ACCCATGATGCCAAAATTTTGCAGATAGGAGATGGAGGAGATTCAGTTCATTGTGTGCAA AAAAGACGACTGATCTCCCCCTGCAAATGTGTACGGAGGAAGCCTATGATTGGTATTACA ACTCGTATTGATGAGCACTACACCATGGTGTTTTTCGAGATCCCGGCGAGCGTGGATTCA GCACAAGGCCCAATCTTTCTTTGGAACAGTTGAGTGTTGGCCCTGGGGACACTGCGGACT TACTGCGGAAAGTACTTCCAGGCATTCGTGATGCAAGTAAGACCTTTGCTATCCCTGCGT TGAAGCAAGTGTTTGAGGACAGCATTCGTCCACTACTTGTTTCAAAGTGTTTACTCATTC ACCAGCCTCTTGATAAATCCATGAAAACTTTCAACCAAAGAACAAATAACCTGTTGAAGA AGTCTCCACGCTACCTCAGTGCCCTAGATGTGACCACAGAAAAGGAAATCCTGCTGGAAG ATGAATGGACTTTGTTCCTTGAGCACATCTTTAAACATAGGGTCATTGTTGTAGATGATT GGACAAAGTGCTACGGGACCGTTCAGACCTTCCTCCACTCGAGTGATGCTGAATCATGCA GTGATTCTTTCAAGGGGGAGTGTGATGCTTCATTCTGTGAGCAAACTGGAAAGGCAAAAC TTGCCTTTGTCATCTTTAAAGAGGGTAAACTTGTCTGGGCTGAGGTTTTCCATGAGGTAC CTTGCAAGAGTGTTGTGGAGGCAGAGGCTTTGGCAGTCATAGCTCTCCTCTTCAAGCTTA TTGACCTTAACTTGTTAAGAGGGACTGTTTGGACCGACAACAAGGTCTGTTATAATGTGC TGAATGGTGAATATGAGATAAAGGTTGATGATCCCAACAGGTCGCTGTTTCTGTTTCTGA GGAGTTTGAGAGGTCGCTTTGAGTCCTTGACCCCGGTCTGGAAACCCAGAGAACTACTGC TGATCCCAGATCGTCTGGTTAGTATGGTTGATGACCCCCTGATATCAAGGAATAGATTGG TACTCAGTATACTGGAAAAAACAGTTCCAATTCTTAGTCAGCCGCAGTTCAGGATATCAT GGAGCAGCTATCTGGGAACAATTTTTGACAAACGTGATGGTGGAAAACAAATTTCTAACA CAACAAATGAAATTAAGGAATCAGATGAATCCGAGGATTCAATCTGTTGGGTTAAGGCTG ATGATGAAGAAGCTGAAATTGCTTCCTTTCTTGAAATTATGAAAACTTTTTCAGCCCATC GCTTGCTTATTGTGGTTGACAACTTTGAAGACAAATCTCCTCATTATCAAAAGTTAATTA AGGATCTCTCTCAAAAGTTTTACACGTGTTGGATGAGTAAAGAAGGCAGTGTCACAATTG TGGAGTATGACTCTCCTAACACTGAAGAGAAAGAGACCAAAAGATTGGTGGTTATGTTTG GTGGGACAATGGCACTGGATGAATATATCCACCAAAAAAATCTCTGTACAGTTGTTTTGG TGAAGACATCTGAGATTAAGCTGCTAAGAGATGCTGGAATCGAAGAAATAAGTGCTAAGA CACTTCTGAGTTTTCGCAACATCAAAGCAAAACCAGTTGTGCCAAAGAAACCTCGGGAGG ATGAGGATCTAGAGAAGGGGGGGGGGGGGGGGGGGGAGGGCAGGTGGTGAATAGGATGAG GAGAGGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACTTCAGTCTTTTGCATGATT CCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTTTGATACTTTGATGCATCGTTGAG ACAGTTTTTTTTGTACCTGAATCATGATGTTCATGTCACAACCGTACGTGATGCTCAAGT AATCTTATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAGGTGGACAACT CACTGGACTTCAGTCTTTTGCATGATTCCTTGCGACGGC



consensusID : consensus_10132#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 343
fasta sequence
                              [TGCCATAAGATACCGTCGGGAGGGATGAGGATCNAGAGAAGGGGGGGGGAGGCACGGNGGTGAATAGGATGAGGAGAGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACTGNCAGTCTNTNGCATGATTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTGGNGATACNCNTGANGCATCGTTGAGACAGTTTNTTTGTTGTACCTGAATCATGGATGTTCATGTCACAACCGTACGGGATGCGCAAGTAATGCTNTGATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAGGTGGACAACTCACTGAACTTCAGTCCAAAAAA]

[+] EMBL BI807220             [TGCCATAAGATACCGTCGGGAGGGATGAGGATCNAGAGAAGGGGGGGGGAGGCACGGNGGTGAATAGGATGAGGAGAGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACTGNCAGTCTNTNGCATGATTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTGGNGATACNCNTGANGCATCGTTGAGACAGTTTNTTTGTTGTACCTGAATCATGGATGTTCATGTCACAACCGTACGGGATGCGCAAGTAATGCTNTGATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAGGTGGACAACTCACTGAACTTCAGTCCAAAAAA]


>consensus_10132#1 TGCCATAAGATACCGTCGGGAGGGATGAGGATCNAGAGAAGGGGGGGGGAGGCACGGNGG TGAATAGGATGAGGAGAGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACTGNCAGT CTNTNGCATGATTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTGGNGATACNCN TGANGCATCGTTGAGACAGTTTNTTTGTTGTACCTGAATCATGGATGTTCATGTCACAAC CGTACGGGATGCGCAAGTAATGCTNTGATCTGACAATGTAGCTTAGCTAACTAAAACATA TGAAGATAAAGGTGGACAACTCACTGAACTTCAGTCCAAAAAA



consensusID : consensus_10132#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 292
fasta sequence
                              [GGAGGGCAGGTGGTGAATAGGATGAGGAGAGGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACTTCAGTCTTTTGCATGATTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTTTGATACTTTGATGCATCGTTGAGACAGTTTTTTTTGTACCTGAATCATGATGTTCATGTCACAACCGTACGTGATGCTCAAGTAATCTTATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAGGTGGACAACTCACTGAACTTCAGTCTAAAAAAAAAA]

[-] EMBL CB645219             [GGAGGGCAGGTGGTGAATAGGATGAGGAGAGGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACTTCAGTCTTTTGCATGATTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTTTGATACTTTGATGCATCGTTGAGACAGTTTTTTTTGTACCTGAATCATGATGTTCATGTCACAACCGTACGTGATGCTCAAGTAATCTTATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAGGTGGACAACTCACTGAACTTCAGTCTAAAAAAAAAA]
[-] EMBL CB637193             [        GGTGGTGAATAGGATGAGGAGAGGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACTTCAGTCTTTTGCATGATTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTTTGATACTTTGATGCATCGTTGAGACAGTTTTTTTTGTACCTGAATCATGATGTTCATGTCACAACCGTACGTGATGCTCAAGTAATCTTATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAGGTGGACAACTCACTGAACT                 ]


>consensus_10132#2 GGAGGGCAGGTGGTGAATAGGATGAGGAGAGGGCAGGTGTGAAGATAAGGTGGACAACTC ACTGAACTTCAGTCTTTTGCATGATTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACAT GTTTGATACTTTGATGCATCGTTGAGACAGTTTTTTTTGTACCTGAATCATGATGTTCAT GTCACAACCGTACGTGATGCTCAAGTAATCTTATCTGACAATGTAGCTTAGCTAACTAAA ACATATGAAGATAAAGGTGGACAACTCACTGAACTTCAGTCTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10132#0      GTACTACAACCCTAGCAGTCAGCTCTGCTTTCCCCAACGCGTTCTCAACCCTACTCCATC 60
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      CCACTTCGTTGTCATCTCTGATGAATCTTTTCTCTCCTGCTGCAGGCTGCGTGTGCGCGG 120
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      AGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAATCCTTACGAAG 180
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      CCAAAATTTCGCAGAGAGGAGGATATCTGTTTGAGGAAAAAAAGGACGGGGTCTCCCTTC 240
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      CTGCAACAGAACCGCGTGATGATGTTACCGTTTGATGTGACGTACCTTAGTTTGTACGCG 300
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      AGATTCAACAAGATGAAGGGGCCGGTGGGCAAGGCGTCACTTATTTGCGGAGGAAAGGAA 360
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      ACCCATGATGCCAAAATTTTGCAGATAGGAGATGGAGGAGATTCAGTTCATTGTGTGCAA 420
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      AAAAGACGACTGATCTCCCCCTGCAAATGTGTACGGAGGAAGCCTATGATTGGTATTACA 480
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      ACTCGTATTGATGAGCACTACACCATGGTGTTTTTCGAGATCCCGGCGAGCGTGGATTCA 540
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      GCACAAGGCCCAATCTTTCTTTGGAACAGTTGAGTGTTGGCCCTGGGGACACTGCGGACT 600
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      TACTGCGGAAAGTACTTCCAGGCATTCGTGATGCAAGTAAGACCTTTGCTATCCCTGCGT 660
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      TGAAGCAAGTGTTTGAGGACAGCATTCGTCCACTACTTGTTTCAAAGTGTTTACTCATTC 720
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      ACCAGCCTCTTGATAAATCCATGAAAACTTTCAACCAAAGAACAAATAACCTGTTGAAGA 780
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      AGTCTCCACGCTACCTCAGTGCCCTAGATGTGACCACAGAAAAGGAAATCCTGCTGGAAG 840
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      ATGAATGGACTTTGTTCCTTGAGCACATCTTTAAACATAGGGTCATTGTTGTAGATGATT 900
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      GGACAAAGTGCTACGGGACCGTTCAGACCTTCCTCCACTCGAGTGATGCTGAATCATGCA 960
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      GTGATTCTTTCAAGGGGGAGTGTGATGCTTCATTCTGTGAGCAAACTGGAAAGGCAAAAC 1020
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      TTGCCTTTGTCATCTTTAAAGAGGGTAAACTTGTCTGGGCTGAGGTTTTCCATGAGGTAC 1080
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      CTTGCAAGAGTGTTGTGGAGGCAGAGGCTTTGGCAGTCATAGCTCTCCTCTTCAAGCTTA 1140
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      TTGACCTTAACTTGTTAAGAGGGACTGTTTGGACCGACAACAAGGTCTGTTATAATGTGC 1200
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      TGAATGGTGAATATGAGATAAAGGTTGATGATCCCAACAGGTCGCTGTTTCTGTTTCTGA 1260
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      GGAGTTTGAGAGGTCGCTTTGAGTCCTTGACCCCGGTCTGGAAACCCAGAGAACTACTGC 1320
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      TGATCCCAGATCGTCTGGTTAGTATGGTTGATGACCCCCTGATATCAAGGAATAGATTGG 1380
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      TACTCAGTATACTGGAAAAAACAGTTCCAATTCTTAGTCAGCCGCAGTTCAGGATATCAT 1440
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      GGAGCAGCTATCTGGGAACAATTTTTGACAAACGTGATGGTGGAAAACAAATTTCTAACA 1500
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      CAACAAATGAAATTAAGGAATCAGATGAATCCGAGGATTCAATCTGTTGGGTTAAGGCTG 1560
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      ATGATGAAGAAGCTGAAATTGCTTCCTTTCTTGAAATTATGAAAACTTTTTCAGCCCATC 1620
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      GCTTGCTTATTGTGGTTGACAACTTTGAAGACAAATCTCCTCATTATCAAAAGTTAATTA 1680
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      AGGATCTCTCTCAAAAGTTTTACACGTGTTGGATGAGTAAAGAAGGCAGTGTCACAATTG 1740
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      TGGAGTATGACTCTCCTAACACTGAAGAGAAAGAGACCAAAAGATTGGTGGTTATGTTTG 1800
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      GTGGGACAATGGCACTGGATGAATATATCCACCAAAAAAATCTCTGTACAGTTGTTTTGG 1860
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      TGAAGACATCTGAGATTAAGCTGCTAAGAGATGCTGGAATCGAAGAAATAAGTGCTAAGA 1920
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      ------------------------------------------------------------
                                                                                   

consensus_10132#0      CACTTCTGAGTTTTCGCAACATCAAAGCAAAACCAGTTGTGCCAAAGAAACCTCGGGAGG 1980
consensus_10132#2      ------------------------------------------------------------
consensus_10132#1      -------------------------------------TGCCATAAGATACCGTCGGGAGG 23
                                                                                   

consensus_10132#0      -ATGAGGATCTAGAGAAGGGGGGGGGGGGGGGGGGGGAGGGCAGGTGGTGAATAGGATGA 2039
consensus_10132#2      -----------------------------------GGAGGGCAGGTGGTGAATAGGATGA 25
consensus_10132#1      GATGAGGATCNAGAGAAGGG-----------GGGGGGAGGCACGGNGGTGAATAGGATGA 72
                                                          *****   ** **************

consensus_10132#0      GGAGAGGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACT-TCAGTCTTTTGCATGA 2098
consensus_10132#2      GGAGAGGGCAGGTGTGAAGATAAGGTGGACAACTCACTGAACT-TCAGTCTTTTGCATGA 84
consensus_10132#1      GGAGAGG-CAGGTGTGAAGATAAGGTGGACAACTCACTGAACTGNCAGTCTNTNGCATGA 131
                       ******* ***********************************  ****** * ******

consensus_10132#0      TTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTT-TGATACT-TTGATGCATCGT 2156
consensus_10132#2      TTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTT-TGATACT-TTGATGCATCGT 142
consensus_10132#1      TTCCTTGCGACGGCAGATTCCTTCGGTCTTTTACATGTGGNGATACNCNTGANGCATCGT 191
                       **************************************   *****   *** *******

consensus_10132#0      TGAGACAGTTTTTTT--TGTACCTGAATCATG-ATGTTCATGTCACAACCGTACGTGATG 2213
consensus_10132#2      TGAGACAGTTTTTTT--TGTACCTGAATCATG-ATGTTCATGTCACAACCGTACGTGATG 199
consensus_10132#1      TGAGACAGTTTNTTTGTTGTACCTGAATCATGGATGTTCATGTCACAACCGTACGGGATG 251
                       *********** ***  *************** ********************** ****

consensus_10132#0      CTCAAGTAAT---CTTATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAG 2270
consensus_10132#2      CTCAAGTAAT---CTTATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAG 256
consensus_10132#1      CGCAAGTAATGCTNTGATCTGACAATGTAGCTTAGCTAACTAAAACATATGAAGATAAAG 311
                       * ********    * ********************************************

consensus_10132#0      GTGGACAACTCACTGGACTTCAGTCTTTTGCATGATTCCTTGCGACGGC 2319
consensus_10132#2      GTGGACAACTCACTGAACTTCAGTCTAAAAAAAAAA------------- 292
consensus_10132#1      GTGGACAACTCACTGAACTTCAGTCCAAAAAA----------------- 343
                       *************** *********      *                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)