|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10146#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1888 fasta sequence
[CTTTCTGCTCTTTCTATTCCCTCCCTCCCTTCTCCCTTCATAGTTCCACCCTCCTTCCATTCCTCTCTGCTGGTCAGGGACGAGAGAAACGTAAACCCAGCCGTGACATTATATTGCCTAGCTAGTTGATTAATTTGTTGCAAGAACTGGCTAGCTAGCTCGAGAAATTCTGTGTACCTGGCCGGGTGCATGGGCAGCGGCGGCGAAGGAGGTGGTGGAGCAGCGAGCGTACGGGATCAGCCGCCGCATGACTTCGCCAACGTCGCGTCCTTCTCCGAGTTGCCGTTCCTGCGGCCGGCTCCGGCGCCCAGGGAGAGCCCCAACAACTCCGCCATCCGCCTCTTCGGCATCGACGTCCCGCACGCGTCGTCGTCGCCTGACGGCAAAGCCTCCAAGGAATCCGTCGTCGTCTCCACCGCCGCCGCCGCGGCGTCCACGCATGGCGCTGCCGCTGCCGCCATTGCCGCGGCCGCCGACAGCAGCCGCAAGTTCGAGTGCCACTACTGCTGCAGGCACTTCCCGACGTCGCAGGCGCTCGGGGGCCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGGGTGCAGATGCAGACCGCGATGGCCGCTGCCGCCGCGGCGGCCAGCGGCGCGCACCACCACCACCACCACCACCAGCTGCTCGGCTACCCGCAGCATCATCACCGCTTCGGCTTGGCAGGCCCCACGGTGGCGGCATTGTATCAACACCCGTCGTGGCCGACGATGAGCGGCGGCGGCGGCGGTATCTCCTCAATTGGCCCTCAGTTCTATAGCGGGATCGGATCGGTCACCCAGCCGATCAACGGGAGCCCGCTGCCGGCGGGGCTCTGGAGGCCGGGCCCGATGGCGGCGCCGCCGCTGCTGGCCGGAGAGCGGCGGCCGGTCGCGGTGTCGACGTCGTCCGTGTTCCGAGGAGACGAGCCAAGAGCTTCAGCTTCTCTTGTGGCGTCCCAGACAGCTTCTTCCTCTTTGCTGCTGTCTCCGCAAGGTCAGTTCGCTTGTGAGCAGCCGCCGGCGACCACCGCAGCTGAGGGCGTGAGCTTAGATTTGCACCTATAATTGTTCTTTTTTCTTCTGTTGGTTTTAGCGGATTACTACGTACAATAACTGATTTCTCGCTACCTTTTCTTCCTTGCCTGGGAATGAGATTGCCCTTTACTAAATTCAGATGAATCGTGCGCCTTTTTTTTTTCTCCTGACACGTGCAAAAGAATTCCATTTGCCAAACTTTGATCCTTTTGTTAATGTGCATATATACACATGACAAAATAATTTGGGTACATTGTTAGGGTTTGAATTATCATAAATTACGTCCAATACAAAACGCCTATGCATTTGAAAATGTTTACTAAGTAGTTAGTTGAGGAACAGTCAGGTTTCATGCTGTTTCTAGACAATAAATGTGCATATTAATTCCTACGATGAAAGAGAACAGAAATTACAACTGCATGCATTAACCAATTTCAATTTCGGATTGCAAAAGCACCAGGGACAATAAAAGAGTAAGATTTTAACTGATCATATTTTTCACGGAATCGGTCACATATAAGTAAGCTGAAAGTGCACAATACTTTTTCAACAATTGAAAAAAAAAATCATAATGCATATACTTTTCATGCGGCCCAGTAAACTGCTGCAGCTTGCAGGGCCGGCCTGTACGTATGCACACGCTAAAAAACATGAAGGATATAGACACTAAAATTCTTTCTGAAGCGGGTGCAGAGTTTTTTGTTTTTTTTAATCCTCTGTACGTGCGTACCTATGGGCAACAGTTCTAGCAACTGCTGCTGCTTGTATGCAATGAGGCTGTAGCTTTATGTGTAGCTTTCGCATGTCGCTAGGGTCAGGTATATGCACAACTGCA]
[+] EMBL AK109827 [CTTTCTGCTCTTTCTATTCCCTCCCTCCCTTCTCCCTTCATAGTTCCACCCTCCTTCCATTCCTCTCTGCTGGTCAGGGACGAGAGAAACGTAAACCCAGCCGTGACATTATATTGCCTAGCTAGTTGATTAATTTGTTGCAAGAACTGGCTAGCTAGCTCGAGAAATTCTGTGTACCTGGCCGGGTGCATGGGCAGCGGCGGCGAAGGAGGTGGTGGAGCAGCGAGCGTACGGGATCAGCCGCCGCATGACTTCGCCAACGTCGCGTCCTTCTCCGAGTTGCCGTTCCTGCGGCCGGCTCCGGCGCCCAGGGAGAGCCCCAACAACTCCGCCATCCGCCTCTTCGGCATCGACGTCCCGCACGCGTCGTCGTCGCCTGACGGCAAAGCCTCCAAGGAATCCGTCGTCGTCTCCACCGCCGCCGCCGCGGCGTCCACGCATGGCGCTGCCGCTGCCGCCATTGCCGCGGCCGCCGACAGCAGCCGCAAGTTCGAGTGCCACTACTGCTGCAGGCACTTCCCGACGTCGCAGGCGCTCGGGGGCCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGGGTGCAGATGCAGACCGCGATGGCCGCTGCCGCCGCGGCGGCCAGCGGCGCGCACCACCACCACCACCACCACCAGCTGCTCGGCTACCCGCAGCATCATCACCGCTTCGGCTTGGCAGGCCCCACGGTGGCGGCATTGTATCAACACCCGTCGTGGCCGACGATGAGCGGCGGCGGCGGCGGTATCTCCTCAATTGGCCCTCAGTTCTATAGCGGGATCGGATCGGTCACCCAGCCGATCAACGGGAGCCCGCTGCCGGCGGGGCTCTGGAGGCCGGGCCCGATGGCGGCGCCGCCGCTGCTGGCCGGAGAGCGGCGGCCGGTCGCGGTGTCGACGTCGTCCGTGTTCCGAGGAGACGAGCCAAGAGCTTCAGCTTCTCTTGTGGCGTCCCAGACAGCTTCTTCCTCTTTGCTGCTGTCTCCGCAAGGTCAGTTCGCTTGTGAGCAGCCGCCGGCGACCACCGCAGCTGAGGGCGTGAGCTTAGATTTGCACCTATAATTGTTCTTTTTTCTTCTGTTGGTTTTAGCGGATTACTACGTACAATAACTGATTTCTCGCTACCTTTTCTTCCTTGCCTGGGAATGAGATTGCCCTTTACTAAATTCAGATGAATCGTGCGCCTTTTTTTTTTCTCCTGACACGTGCAAAAGAATTCCATTTGCCAAACTTTGATCCTTTTGTTAATGTGCATATATACACATGACAAAATAATTTGGGTACATTGTTAGGGTTTGAATTATCATAAATTACGTCCAATACAAAACGCCTATGCATTTGAAAATGTTTACTAAGTAGTTAGTTGAGGAACAGTCAGGTTTCATGCTGTTTCTAGACAATAAATGTGCATATTAATTCCTACGATGAAAGAGAACAGAAATTACAACTGCATGCATTAACCAATTTCAATTTCGGATTGCAAAAGCACCAGGGACAATAAAAGAGTAAGATTTTAACTGATCATATTTTTCACGGAATCGGTCACATATAAGTAAGCTGAAAGTGCACAATACTTTTTCAACAATTGAAAAAAAAAATCATAATGCATATACTTTTCATGCGGCCCAGTAAACTGCTGCAGCTTGCAGGGCCGGCCTGTACGTATGCACACGCTAAAAAACATGAAGGATATAGACACTAAAATTCTTTCTGAAGCGGGTGCAGAGTTTTTTGTTTTTTTTAATCCTCTGTACGTGCGTACCTATGGGCAACAGTTCTAGCAACTGCTGCTGCTTGTATGCAATGAGGCTGTAGCTTTATGTGTAGCTTTCGCATGTCGCTAGGGTCAGGTATATGCACAACTGCA]
consensusID : consensus_10146#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1345 fasta sequence
[CCATCAGATCACCTTGAACCTACCTAGCTAGCGAGCTAATCTCCTGTAGTTCAGTAGCTATCTAGCTAGCTTGCCCTAGCTACCTTGCCGGCGAGCTAGGCGGTGGCCGGCTGGCCGGCGATGAGCGAGCACGACGCGAAACACGTCGGAGACGTGCCGGCGGCCGCGGGCATCGAGTCGTTCTCGCAGCTGCCGTTCGTGCGCCCGAGGCCGGCGGCGATGGCCGGCTCCAGCCCCGCGTCGTCCATCCGGCTGTTCGGGTTCGAGCTCCCGCCCGACGGCGTCGTCTCCGCCGCCGGATTAGGAGGCGGCGGCGGCGGCGGCGGGCGCAAGTTCGAGTGCCACTACTGCTGCCGAAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGCGCGCAGTTCCAGAGCGCCATGGCCATGCACGCGCACTACCCGGCCTACCCTGCCTACGCCAGCTACTACGGCTCGCACCGCTTCGGCCCCTAGCCGCCGCACATGGCGCCGCCGCCGCCGCCGCCGTACCCCTCGTGGTCCAACCACCACCACCTCCCGCCCGGCGGTCCCGCGCCCATGGTGGCGGCGAGGTACTACGGCCCGGCGCCGCCAGGCTCCGTCTCGCACCCGATCAACGGCAGCCCGGTGGTGCCGGCCGCCGCTGCGCTGTGGCGTGTCCCCGCCGCCGCCATCGCCGTGGCGGCGGCCGCCGCGCCGCTGGCGCGCCAAGAACGGCAGCCGCCGCTGTCGCTGGCCGGTGGACGCGAGGAGGAGGACGCAATGGTGGAGGTAAGGAGAGGGAACGGGGTAGGCGGCGCCGCCGCCGCGGTGGTGCAACTGCAACCCGGCTCGCGGCTGTCGCGGTCGTCGTCCTCGTCGTCGTCGGCGTCGTCGTCTTCGCAGCATCACCACGAGCGCCGCCGCCTGGGAGACCTGGCAGAGATTAACCGGGAGAATGTGAGCTTGGATCTCACCTTGTAATTCTCCATGAGAATTGAGAGATGCGTGCGCGATTAATTAGCGGGTTCTTGCCTTCTTGGTAAGTGCGAATTAAGAGAAAAAAATAATTCTTTTTCTTTAGTTCGTGAATTCGTTTAGCTAGAGATGCTCACAAGAGAGGGATTTTCTTTTTCTTCAGTGCCTTTTTTGCAGTCCTTTTTCGCCGCTGCACTCATTCAATATTCCAACCTCGTTCTGTAACTTGTAACTTCTGTTCATCACATTAGATTTCTTTGTTAGAAATAGAGATAAATTCAAGGACAAGACGTATGGAGCATGAAAGATTGTGGTCTCATAATTAATTACTATCTCCCTA]
[+] EMBL AK120514 [CCATCAGATCACCTTGAACCTACCTAGCTAGCGAGCTAATCTCCTGTAGTTCAGTAGCTATCTAGCTAGCTTGCCCTAGCTACCTTGCCGGCGAGCTAGGCGGTGGCCGGCTGGCCGGCGATGAGCGAGCACGACGCGAAACACGTCGGAGACGTGCCGGCGGCCGCGGGCATCGAGTCGTTCTCGCAGCTGCCGTTCGTGCGCCCGAGGCCGGCGGCGATGGCCGGCTCCAGCCCCGCGTCGTCCATCCGGCTGTTCGGGTTCGAGCTCCCGCCCGACGGCGTCGTCTCCGCCGCCGGATTAGGAGGCGGCGGCGGCGGCGGCGGGCGCAAGTTCGAGTGCCACTACTGCTGCCGAAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGCGCGCAGTTCCAGAGCGCCATGGCCATGCACGCGCACTACCCGGCCTACCCTGCCTACGCCAGCTACTACGGCTCGCACCGCTTCGGCCCCTAGCCGCCGCACATGGCGCCGCCGCCGCCGCCGCCGTACCCCTCGTGGTCCAACCACCACCACCTCCCGCCCGGCGGTCCCGCGCCCATGGTGGCGGCGAGGTACTACGGCCCGGCGCCGCCAGGCTCCGTCTCGCACCCGATCAACGGCAGCCCGGTGGTGCCGGCCGCCGCTGCGCTGTGGCGTGTCCCCGCCGCCGCCATCGCCGTGGCGGCGGCCGCCGCGCCGCTGGCGCGCCAAGAACGGCAGCCGCCGCTGTCGCTGGCCGGTGGACGCGAGGAGGAGGACGCAATGGTGGAGGTAAGGAGAGGGAACGGGGTAGGCGGCGCCGCCGCCGCGGTGGTGCAACTGCAACCCGGCTCGCGGCTGTCGCGGTCGTCGTCCTCGTCGTCGTCGGCGTCGTCGTCTTCGCAGCATCACCACGAGCGCCGCCGCCTGGGAGACCTGGCAGAGATTAACCGGGAGAATGTGAGCTTGGATCTCACCTTGTAATTCTCCATGAGAATTGAGAGATGCGTGCGCGATTAATTAGCGGGTTCTTGCCTTCTTGGTAAGTGCGAATTAAGAGAAAAAAATAATTCTTTTTCTTTAGTTCGTGAATTCGTTTAGCTAGAGATGCTCACAAGAGAGGGATTTTCTTTTTCTTCAGTGCCTTTTTTGCAGTCCTTTTTCGCCGCTGCACTCATTCAATATTCCAACCTCGTTCTGTAACTTGTAACTTCTGTTCATCACATTAGATTTCTTTGTTAGAAATAGAGATAAATTCAAGGACAAGACGTATGGAGCATGAAAGATTGTGGTCTCATAATTAATTACTATCTCCCTA]
consensusID : consensus_10146#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1217 fasta sequence
[AAAGAAAGAAAGAAAAATCTTCAATAGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCTTCTCCTCCTCTCTTCTCTTCTCTTCTCCCCCTTCGCTTCTCTTTCCCCCCACTCAATCAAACCCTAACCCTACTGCGTACGCCGCGCCATCGACGACGACGCGCTCGCGCGATGAGCGTTGAGCGAGATGGGCGCGACCAGCCCAACATCGACTCGTTCTCGCAGCTGCCGTTCATCCGCCAGGCGGCCCGCGAGAAGCCGCCGTCGTCGTCGTCCGGCGGCTCCGTCGTCGTCCCTCCTGCGCCCATCCGGCTGTTCGGCTTCGACGTGCCGCCGGACGCGTCCACCACCGCCGATGTGCTAGGAGAGAACAAGGAGAGCGCCGCCGCCGTCGTCGCCGCTGAGGGGAGTAAACAAACGGCGTCCGGTCTGGACGCAATCGGCGGCGGCGGCGGGAGCCGGAAGTTCGAGTGCCACTACTGCTGCCGGAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGGAGCGGCAGCGCGCGAAGCACGCGCAGTTCCAGACGGCCATGGCCATGCACCACGGCCACGGTCAGTACTACCCGCTCCCGGACCCCTACGCGGCGGCGTTCGCGGCGTACCCCGGCCACCACCACCACCACCGCTTCGCCGCCACCGCCGCCGCCGCCATGCCTCCGCCGCCGCACTACCCGTCGTGGGCTGCAGGCTCCAGGTACTACAGCGGTCCAGGATCCATCTCGCAGCCGATCAACGGGAGCCCGGTGGCGCCGGCCGGGATGTGGCGGCTCCCTGCCGCCGCCAGCTGCGTCGGCTTGGCGACGACGACGACTACGGCGGCGCCGCTGCCCGCGCGGCGCCAAGAGCGGCCGGCGGCGACAATTCCTTCGCTGCTCGGAGGCGGCGAGGAGCCCGTGGTGCTGGGAGGAGCTGGCTCCACCTCGTTCTCGCCGTCGACGTCCTCCTCCTCGTCGTCGGCGTCGCCGCACGAGCGGCGCGCGCAGCCAGCGCGTAAAGAGAATGTGAGTTTGGATCTGAGCTTGTAGCAGCGGAGGAATGATGGCCGGTGTCAGCCTCATAATTGTTTCTTAATTACAAAACAAAATCAAGTGCCTTTTCATTTCACGTTTGGATTTATTTTCAGCTCGTTGAGCTAATACCAATGGTACTAGAGATCAGCTACTAATTA]
[+] EMBL AK058457 [AAAGAAAGAAAGAAAAATCTTCAATAGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCTTCTCCTCCTCTCTTCTCTTCTCTTCTCCCCCTTCGCTTCTCTTTCCCCCCACTCAATCAAACCCTAACCCTACTGCGTACGCCGCGCCATCGACGACGACGCGCTCGCGCGATGAGCGTTGAGCGAGATGGGCGCGACCAGCCCAACATCGACTCGTTCTCGCAGCTGCCGTTCATCCGCCAGGCGGCCCGCGAGAAGCCGCCGTCGTCGTCGTCCGGCGGCTCCGTCGTCGTCCCTCCTGCGCCCATCCGGCTGTTCGGCTTCGACGTGCCGCCGGACGCGTCCACCACCGCCGATGTGCTAGGAGAGAACAAGGAGAGCGCCGCCGCCGTCGTCGCCGCTGAGGGGAGTAAACAAACGGCGTCCGGTCTGGACGCAATCGGCGGCGGCGGCGGGAGCCGGAAGTTCGAGTGCCACTACTGCTGCCGGAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGGAGCGGCAGCGCGCGAAGCACGCGCAGTTCCAGACGGCCATGGCCATGCACCACGGCCACGGTCAGTACTACCCGCTCCCGGACCCCTACGCGGCGGCGTTCGCGGCGTACCCCGGCCACCACCACCACCACCGCTTCGCCGCCACCGCCGCCGCCGCCATGCCTCCGCCGCCGCACTACCCGTCGTGGGCTGCAGGCTCCAGGTACTACAGCGGTCCAGGATCCATCTCGCAGCCGATCAACGGGAGCCCGGTGGCGCCGGCCGGGATGTGGCGGCTCCCTGCCGCCGCCAGCTGCGTCGGCTTGGCGACGACGACGACTACGGCGGCGCCGCTGCCCGCGCGGCGCCAAGAGCGGCCGGCGGCGACAATTCCTTCGCTGCTCGGAGGCGGCGAGGAGCCCGTGGTGCTGGGAGGAGCTGGCTCCACCTCGTTCTCGCCGTCGACGTCCTCCTCCTCGTCGTCGGCGTCGCCGCACGAGCGGCGCGCGCAGCCAGCGCGTAAAGAGAATGTGAGTTTGGATCTGAGCTTGTAGCAGCGGAGGAATGATGGCCGGTGTCAGCCTCATAATTGTTTCTTAATTACAAAACAAAATCAAGTGCCTTTTCATTTCACGTTTGGATTTATTTTCAGCTCGTTGAGCTAATACCAATGGTACTAGAGATCAGCTACTAATTA]
consensusID : consensus_10146#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1215 fasta sequence
[ATGGTCCCCCTCTTCGTCCCCCTCTCCTCCGCCCCAGCTTACAACTCCCATATCCCCTTAAAACCACACCAACTCGTAGCCAATTTCTTCAGCGCGGAGACGCAAGATATAGCAGCAGCTAGCAAGAATTGCCCCGAGTTGGGTGGTTAATTCTTGGTTTTGGTTCACGTAGAAGCAGATAGCTTGGTTGGTTGGTTAGACGGCCATGGCGAAGCCGCAGGACATGCGCAGCGTCGACTCGTTCTCGCAGCTGCCGTTCATCCGGCCGGCGCCGCCGCCGCAGCAGCAGGCGCGGGACACAATCCGGCTGTTCGGCTGCGAATTCTCCAACGACCTGCAGCTGCGGCCCACGGAGGCCGGTGCAGGCTCCCCCGACGCGGCCAACGGCAGCACGGTCACGTCAGAGGGCAGCAACGGCGGCGACGGCGGCACCAAGAACGGCGGCGCCGCGACGGCGGCGGCGGAGCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGGAGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACCGCTACATGCCGGGGCACATGTACGGCCTCTTCAACTACCACCACCACATCGGCGGCCGCTTCGACCACCACCCGCCGCCGCCGCCGCCGCCGCCACCGCCGGCGCACTACCCGATGTGGACGAGCGCCGCCCCGGGCGCCTTCGCCGGGCCAGGTTCCATGGCGCAGCCCATCAACGGTAGCCCCGTGCAGGCCGGGCTGTGGAGCGTGCCGCCGCCGACGGAGAATTTCGGCAGCACGGCCGGCAGGCAGGGCGCTGACAAGCTGGCTACTACGGTGGCGGGCACGCCGGCGGCGGGGGAGGTGGCATGCAAGGACGAGATGGTGCCGATGAGCTTGCTGTCCTCGTCGCCTTCGTTGTCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGGTGTGAATTGGGGCAGAAGGAGGGTGTCAGCTTGGACCTCCATTTGTAATCCATGTCTAATTAGGTTTTCTTCTTGTGGATTAGCAGTCGCAAGAAAGGGTATGTTAATTCTCATAGCTTAAATAATCTACTCTTTTTGCCTTGTCCGGATCCAAGTTTAGCTAGCTACCTAGCTTGTGTTGCCACTTTATTTTTACCAGGCAAAGAAAAAGAAAATCC]
[+] EMBL AK068762 [ATGGTCCCCCTCTTCGTCCCCCTCTCCTCCGCCCCAGCTTACAACTCCCATATCCCCTTAAAACCACACCAACTCGTAGCCAATTTCTTCAGCGCGGAGACGCAAGATATAGCAGCAGCTAGCAAGAATTGCCCCGAGTTGGGTGGTTAATTCTTGGTTTTGGTTCACGTAGAAGCAGATAGCTTGGTTGGTTGGTTAGACGGCCATGGCGAAGCCGCAGGACATGCGCAGCGTCGACTCGTTCTCGCAGCTGCCGTTCATCCGGCCGGCGCCGCCGCCGCAGCAGCAGGCGCGGGACACAATCCGGCTGTTCGGCTGCGAATTCTCCAACGACCTGCAGCTGCGGCCCACGGAGGCCGGTGCAGGCTCCCCCGACGCGGCCAACGGCAGCACGGTCACGTCAGAGGGCAGCAACGGCGGCGACGGCGGCACCAAGAACGGCGGCGCCGCGACGGCGGCGGCGGAGCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGGAGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACCGCTACATGCCGGGGCACATGTACGGCCTCTTCAACTACCACCACCACATCGGCGGCCGCTTCGACCACCACCCGCCGCCGCCGCCGCCGCCGCCACCGCCGGCGCACTACCCGATGTGGACGAGCGCCGCCCCGGGCGCCTTCGCCGGGCCAGGTTCCATGGCGCAGCCCATCAACGGTAGCCCCGTGCAGGCCGGGCTGTGGAGCGTGCCGCCGCCGACGGAGAATTTCGGCAGCACGGCCGGCAGGCAGGGCGCTGACAAGCTGGCTACTACGGTGGCGGGCACGCCGGCGGCGGGGGAGGTGGCATGCAAGGACGAGATGGTGCCGATGAGCTTGCTGTCCTCGTCGCCTTCGTTGTCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGGTGTGAATTGGGGCAGAAGGAGGGTGTCAGCTTGGACCTCCATTTGTAATCCATGTCTAATTAGGTTTTCTTCTTGTGGATTAGCAGTCGCAAGAAAGGGTATGTTAATTCTCATAGCTTAAATAATCTACTCTTTTTGCCTTGTCCGGATCCAAGTTTAGCTAGCTACCTAGCTTGTGTTGCCACTTTATTTTTACCAGGCAAAGAAAAAGAAAATCC]
[+] EMBL AK058592 [ ACGCAAGATATAGCAGCAGCTAGCAAGAATTGCCTCGAGTTGGGTGGTTAATTCTTGGTTTTGGTTCACGTAGAAGCAGATAGCTTGGTTGGTTGGTTAGACGGCCATGGCGAAGCCGCAGGACATGCGCAGCGTCGACTCGTTCTCGCAGCTGCCGTTCATCCGGCCGGCGCCGCCGCCGCAGCAGCAGGCGCGGGACACAATCCGGCTGTTCGGCTGCGAATTCTCCAACGACCTGCAGCTGCGGCCCACGGAGGCCGGTGCAGGCTCCCCCGACGCGGCCAACGGCAGCACGGTCACGTCAGAGGGCAGCAACGGCGGCGACGGCGGCACCAAGAACGGCGGCGCCGCGACGGCGGCGGCGGAGCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGGAGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACCGCTACATGCCGGGGCACATGTACGGCCTCTTCAACTACCACCACCACATCGGCGGCCGCTTCGACCACCACCCGCCGCCGCCGCCGCCGCCGCCACCGCCGGCGCACTACCCGATGTGGACGAGCGCCGCCCCGGGCGCCTTCGCCGGGCCAGGTTCCATGGCGCAGCCCATCAACGGTAGCCCCGTGCAGGCCGGGCTGTGGAGCGTGCCGCCGCCGACGGAGAATTTCGGCAGCACGGCCGGCAGGCAGGGCGCTGACAAGCTGGCTACTACGGTGGCGGGCACGCCGGCGGCGGGGGAGGTGGCATGCAAGGACGAGATGGTGCCGATGAGCTTGCTGTCCTCGTCGCCTTCGTTGTCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGGTGTGAATTGGGGCAGAAGGAGGGTGTCAGCTTGGACCTCCATTTGTAATCCATGTCTAATTAGGTTTTCTTCTTGTGGATTAGCAGTCGCAAGAAAGGGTATGTTAATTCTCATAGCTTAAATAATCTACT ]
[-] EMBL BI305764 [ TGCAGCTGCGGCCCACGGAGGCCGGTGCAGGCTCCCCCGACGCGGCCAACGGCAGCACGGTCACGTCAGAGGGCAGCA ACGGCGGCACCAAGAACGGCGGCGCCGCGACGGCGGCGGCGGAGCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGGAGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACCGCTACATGCCGGGGCACATGTACGGCCTCTTCAACTACCACC ]
[+] EMBL CB631908 [ CCGCCGGCGCACTACCCGATGTGGACGAGCGCCGCCCCGGGCGCCTTCGCCGGGCCCGGCTCCATGGCGCAGCCCATCAACGGTAGCCCCGTGCAGGCCGGGCTGTGGAGCGTGCCGCCGCCGACGGAGAATTTCGGCAGCACGGCCGGCAGGCAGGGCGCTGACAAACTGGCTACTACGGTGGCGGGCACGCCGGCGGCGGGGGAGGTGGCATGCAAGGACGAGATGGTGCCGATGAGCTTGCTGTCCTCGTCGCCTTCGTTGTCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGGTGTGAATTGGGGCAGAAGGAGGGTGTCAGCTTGGACCTCCATTTGTAATCCATGTCTAATTAGGTTTTCTTCTTGTGGATTAGCAGTCGCAAGAAAGGGTATGTTAATT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10146#2 ------------------------------------------AAAGAAAGAAAGAAAAAT 18
consensus_10146#3 ---------------ATGGTCCCCCTCTTCGTCCCCCTCTCCTCCGCCCCAGCTTACAAC 45
consensus_10146#1 ------------------------------------------------------------
consensus_10146#0 CTTTCTGCTCTTTCTATTCCCTCCCTCCCTTCTCCCTTCATAGTTCCACCCTCCTTCCAT 60
consensus_10146#2 CTTCAATAGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCTTCTCCTCCTCTCTTCTCT 78
consensus_10146#3 TCCCATATCCCCTTAAAACCACACCAACTCGTAGCCAATTTCTTCAGCGCGGAGACGCAA 105
consensus_10146#1 ------------------------------------------------------------
consensus_10146#0 TCCTCTCTGCTGGTCAGGGACGAGAGAAACGTAAACCCAGCCGTGACATTATATTGCCTA 120
consensus_10146#2 TCTCTTCTCCCCCTTCGCTTCTCTTTCC--CCCCACT---CAATCAAACCCTAACCCTAC 133
consensus_10146#3 GATATAGCAGCAGCTAGCAAGAATTGCC--CCGAGTTGGGTGGTTAATTCTTGGTTTTGG 163
consensus_10146#1 ----------------------------------------CCATCAGATC---ACCTTGA 17
consensus_10146#0 GCTAGTTGATTAATTTGTTGCAAGAACTGGCTAGCTAGCTCGAGAAATTCTGTGTACCTG 180
* *
consensus_10146#2 TGCGTACGCCGCGCCATCGACGACGACGCGC-TCGCGCGATGAGCGTTGAGCGAGATGGG 192
consensus_10146#3 TTC--ACGTAGAAGCAGATAGCTTGGTTGGT-TGGTTAGACGGCCAT--GGCGAAGCCG- 217
consensus_10146#1 ACC---TACCTAGCTAGCGAGCTAATCTCCTGTAGTTCAGTAGCTATCTAGCTAGCTTGC 74
consensus_10146#0 GCCGGGTGCATGGGCAGCGGCGGCGAAGGAGGTGGTGGAGCAGCGAGCGTACGGGATCAG 240
* * * * *
consensus_10146#2 ------CGCGACCAGCCCAACATCGACTCGTTCTCGCAGCTGCCGTTCATCCGCCAGGCG 246
consensus_10146#3 ------CAGGACATGCGCAGCGTCGACTCGTTCTCGCAGCTGCCGTTCATCCGGCCGGCG 271
consensus_10146#1 ------CCTAGCTACCTTGCCGGCGAGCTA----GGCGGTGGCCGGCTGGCCGGCGATGA 124
consensus_10146#0 CCGCCGCATGACTTCGCCAACGTCGCGTCCTTCTCCGAGTTGCCGTTCCTGCGGCCGGCT 300
* * * ** * **** ** *
consensus_10146#2 GCCCGCGAGAAGCCGCCGTCGT----CGTCGTCCGGCGGCT-CCGTCGTCGTCCCTCCTG 301
consensus_10146#3 CCGCCGCCGCAGCAGCAGGCGCGGGACACAATCCGGCTGTT-CGGCTGCGAATTCTCCAA 330
consensus_10146#1 GCGAGCACGACGCGAAACACGTCGGAGACGTGCCGGCGGCCGCGGGCATCGAGTCGTTCT 184
consensus_10146#0 CCG-GCGCCCAGGGAGAGCCCC----AACAACTCCGCCATC-----CGCCTCTTCGGCAT 350
* * * * ** *
consensus_10146#2 CGCCCATCCGGCTGTTCGGCTTCGACGTGCCGCCGGACGCGTCCACCACCGCCGATGTGC 361
consensus_10146#3 CGACC-TGCAGCTG--CGGCCCACGGAGGCCGGTGCAGGCTCCC-------CCGACGCGG 380
consensus_10146#1 CGCA---GCTGCCGTTCGTGCGCCCGAGGCCGGCGGCGATGGCCGGC----TCCAGCCCC 237
consensus_10146#0 CGACGTCCCGCACGCGTCGTCGTCGCCTGACGGCAAAGCCTCCAAG-------GAATCCG 403
** * * * ** * *
consensus_10146#2 TAGGAGAGAACAAGGAGAGCGCCGCCGCCGTCGTCGCCGCTGAGGGGAGTAAACAAACGG 421
consensus_10146#3 CCAACGGCAGCACGGTCACGTCAGAGGGCAGCAACGGCGGCGACGGCGGCA--CCAAGAA 438
consensus_10146#1 GCGTCGTCCATCCGGCTGTTCGGGTTCGAGCTCCCGCC--CGACGGCGTCG--TCTCCGC 293
consensus_10146#0 TCGTCGTCTCCACCGCCGCCGCCGC-GGCGTCCACGC-----ATGGCGCTG--CCGCTGC 455
* * * ** * **
consensus_10146#2 CGTCCGGTCTGGACGCAATCGGCGGCGGCGGCGGGAGCCGGAAGTTCGAGTGCCACTACT 481
consensus_10146#3 CGGCGGCGCCG--------CGACGGCGGCGGCGGAG--CGCAAGTTCGAGTGCCACTACT 488
consensus_10146#1 CGCCGGATTAGGAGG----CGGCGGCGGCGGCGGCGGGCGCAAGTTCGAGTGCCACTACT 349
consensus_10146#0 CGCCATTGCCG--------CGGCCGC--CGACAGCAGCCGCAAGTTCGAGTGCCACTACT 505
** * * ** * ** ** * * ** *******************
consensus_10146#2 GCTGCCGGAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGG 541
consensus_10146#3 GCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGG 548
consensus_10146#1 GCTGCCGAAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGG 409
consensus_10146#0 GCTGCAGGCACTTCCCGACGTCGCAGGCGCTCGGGGGCCACCAGAACGCGCACAAGCGGG 565
***** * ********************** ** ** ****************** ***
consensus_10146#2 AGCGGCAGCGCGCGAAGCACGCGCAGTTCCAGACGGCCATGGCCATGCACCACGGCCACG 601
consensus_10146#3 AGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACC---GCTACA 605
consensus_10146#1 AGCGGCAGCACGCGAAGCGCGCGCAGTTCCAGAGCGCCATGGCCATGCACGCGCACTACC 469
consensus_10146#0 AGCGGCAGCACGCGAAGCGGGTGCAGATGCAGACCGCGATGGCCGC-TGCCGCCGCGGCG 624
********* *** **** * ** * *** * * *** * * *
consensus_10146#2 GTCAGTACTACCCGCTCCCGGACCCCTACGCGGCGGCGTTCGCGGCGTACCCCGGCCACC 661
consensus_10146#3 TGCCGGGGCACATGTAC--GGCCTCTTCAACTACCACCACCACATCGG----CGGCCGCT 659
consensus_10146#1 CGGCCTACCCTGCCTAC--GCCAGCTACTACGGCTCGCACCGCTTCGGCCCCTAGCCGCC 527
consensus_10146#0 GCCAGCGGCGCGCAC-CACCACCACCACCACCACCAGCTGCTCGGCTACCCGCAGC-ATC 682
* * * * * * * **
consensus_10146#2 ACCACCACCACCGCTTCGCCGCCACCGCCGCCGCCGCCATGCCTCCGCCGCCGC-ACTAC 720
consensus_10146#3 TCGACCACCACC----CGCCGCCGCCGCCGCCGCCGCCA-----CCGCCGGCGC-ACTAC 709
consensus_10146#1 GCACATGGCGCCGC--CGCCGCCGCCGCCGTACCCCTCGTGGTCCAACCACCACCACCTC 585
consensus_10146#0 ATCACCGCTTCGGCTTGGCAGGCCCCACGGTGGCGGCATTGTATCAACACCCGTCGTGGC 742
* ** * * ** * * * * * * *
consensus_10146#2 C--CGTC--GTGG-GCTGCAG---------GCTCCAGGTAC-TACA--GCGG------TC 757
consensus_10146#3 C--CGAT--GTGG-ACGAGCGCC-------GCCCCGGGCGCCTTCG--CCGG------GC 749
consensus_10146#1 C--CGCCCGGCGG-TCCCGCGCCCATGGTGGCGGCGAGGTACTACGGCCCGGCGCC--GC 640
consensus_10146#0 CGACGATGAGCGGCGGCGGCGGCGGTATCTCCTCAATTGGCCCTCAGTTCTATAGCGGGA 802
* ** * ** * * * *
consensus_10146#2 CAGGATCCATCTCGCAGCCGATCAACGGGAGCCCGGTGGCGCCGGCCGG------GATGT 811
consensus_10146#3 CAGGTTCCATGGCGCAGCCCATCAACGGTAGCCCCGTG---CAGGCCGG------GCTGT 800
consensus_10146#1 CAGGCTCCGTCTCGCACCCGATCAACGGCAGCCCGGTGGTGCCGGCCGCCGCTGCGCTGT 700
consensus_10146#0 TCGGATCGGTCACCCAGCCGATCAACGGGAGCCCGCTG---CCGGCGGG------GCTCT 853
** ** * * ** ** ******** ***** ** * *** * * * *
consensus_10146#2 GGCGGCTCCCTGCCGCCGCCAGCTGCGTCGGCTTGGCGAC---GACGACGAC-------- 860
consensus_10146#3 GGAG----CGTGCCGCCGCCGACGGAGA-ATTTCGGCAGC---ACGGCCGGC-------- 844
consensus_10146#1 GGCGTGTCCCCGCCGCCGCCATCGCCGTGGCGGCGGCCGCCGCGCCGCTGGCGCGCCAAG 760
consensus_10146#0 GGAGG----CCGGGCCCGATGGCGGCGCCGCCGCTGCTGGCCGGAGAGCGGCG------- 902
** * * *** * * ** * *
consensus_10146#2 TACGGCGGC-------GCCGCTGCCCGCGCGGCGCCAAGAGCGGCCGGCGGCGACAATTC 913
consensus_10146#3 A--GGCAGG-------GC-GCTGACAAGCTGGCTACTACGGTGGCGGGCA-CGCCGGCGG 893
consensus_10146#1 AACGGCAGCCGCCGCTGTCGCTGGCCGGTGGACGCGAGGAGGAGGACGCAATGGTGGAGG 820
consensus_10146#0 GCCGGTCGCGGT-GTCGACGTCGTCCGTGTTCCGAGGAGACGAGCCAAGAGCTTCAGCTT 961
** * * * * * * *
consensus_10146#2 CTTCG---------CTGCTCGGAGGCGGCGAGGAGCCCGTGGTGCTGGGAGGAGCTGGCT 964
consensus_10146#3 CGGGG---------GAGGTGGCATGCAAGGACGAG---ATGGTGCCG--ATGAGCTTGCT 939
consensus_10146#1 TAAGGAGAGGGAACGGGGTAGGCGGCGCCGCCGCCGCGGTGGTGCAACTGCAACCCGGCT 880
consensus_10146#0 CTCTTGTGGCGTCCCAGACAGCTTCTTCCTCTTTGCTGCTGTCTCCGCAAGGTCAGTTCG 1021
* * ** * *
consensus_10146#2 CCACCTCGTTCTCGCCGTCG-ACGTCCTCCTCCTCGTCGTCGGCGTCGCCGCACGAGCGG 1023
consensus_10146#3 GT-CCTCGTCGCCTTCGTTG-TCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGG 997
consensus_10146#1 CGCGGCTGTCGCGGTCGTCG-TCCTCGTCGTCGTCGGCGTCGTCGTCTTCGCAGCATCAC 939
consensus_10146#0 CTTGTGAGCAGCCGCCGGCGACCACCGCAGCTGAGGGCGTGAGCTTAGATTTGCACCTAT 1081
* ** * * * * *** *
consensus_10146#2 CGCGCGC---------------AGCCAGCGCGTA------AAGAGAATGTGAGTTTGGAT 1062
consensus_10146#3 TGTG------------------AATTGGGGCAGA------AGGAGGGTGTCAGCTTGGAC 1033
consensus_10146#1 CACGAGCGCCGCCGCCTGGGAGACCTGGCAGAGATTAACCGGGAGAATGTGAGCTTGGAT 999
consensus_10146#0 AATTGTTCTTTTTTCTTCTGTTGGTTTTAGCGGATTACTACGTACAATAACTGATTTCTC 1141
* * * * **
consensus_10146#2 CTGAGCTTGTAGC---AGCGGAGGAATGATGGCC-------------GGTGTCAGCCTCA 1106
consensus_10146#3 CTCCATTTGTAAT---CCATGTCTAATTAGGTTTTCTTCTT--GTGGATTAGCAGTCGCA 1088
consensus_10146#1 CTCACCTTGTAATTCTCCATGAGAATTGAGAGATGCGTGCGCGATTAATTAGCGGGTTCT 1059
consensus_10146#0 GCTACCTTTTCTTCCTTGCCTGGGAATGAGATTGCCCTTTACTA-AATTCAGATGAATCG 1200
** * * * * * *
consensus_10146#2 T--AATTGTTTCTTAATTA-CA--AAACAAAATCAAGTGCCTTTTCATTTCACGTTTGGA 1161
consensus_10146#3 AGAAAGGGTATGTTAATTCTCA--TAGCTTAAATAATCTACTCTTTTTGCCTTGTCCGGA 1146
consensus_10146#1 T--GCCTTCTTGGTAAGTGCGAATTAAGAGAAAAAAATAATTCTTTTTCTTTAGTTCGTG 1117
consensus_10146#0 TGCGCCTTTTTTTTTTCTCCTG---ACACGTGCAAAAGAATTCCATTTGCCAAACTTTGA 1257
* * * * ** * *
consensus_10146#2 TTTATTT-TCAGCTCGT---TGAGCTAATACCAATGGTACTAGAGAT--CAGCTA----- 1210
consensus_10146#3 TCCAAGT-TTAGCTAGC---TACCTAGCTTGTGTTGCCACTTTATTT--TTACCAGG--- 1197
consensus_10146#1 AATTCGT-TTAGCTAGA---GATGCTCACAAGAGAGGGATTTTCTTT--TTCTTCAG--- 1168
consensus_10146#0 TCCTTTTGTTAATGTGCATATATACACATGACAAAATAATTTGGGTACATTGTTAGGGTT 1317
* * * * * *
consensus_10146#2 CTAATTA----------------------------------------------------- 1217
consensus_10146#3 CAAAGAAAAAGAAAATCC------------------------------------------ 1215
consensus_10146#1 TGCCTTTTTTGCAGTCCTTTTTCGC-CGCTGCACTCATTCAATATTCCAACCTCGTTCTG 1227
consensus_10146#0 TGAATTATCATAAATTACGTCCAATACAAAACGCCTATGCATTTGAAAATGTTTACTAAG 1377
consensus_10146#2 ------------------------------------------------------------
consensus_10146#3 ------------------------------------------------------------
consensus_10146#1 TAACTTGTAACTTCTGTTCATCACATTAGATTTCTTTGTTAGAAATAGAGATAAATTCAA 1287
consensus_10146#0 TAGTTAGTTGAGGAACAGTCAGGTTTCATGCTGTTTCTAGACAATAAATGTGCATATTAA 1437
consensus_10146#2 ------------------------------------------------------------
consensus_10146#3 ------------------------------------------------------------
consensus_10146#1 GGACAAGACGTATGGAGCATGAAAGATTGTGGTCTCATAATTAATTACTATCTCCCTA-- 1345
consensus_10146#0 TTCCTACGATGAAAGAGAACAGAAATTACAACTGCATGCATTAACCAATTTCAATTTCGG 1497
consensus_10146#2 ------------------------------------------------------------
consensus_10146#3 ------------------------------------------------------------
consensus_10146#1 ------------------------------------------------------------
consensus_10146#0 ATTGCAAAAGCACCAGGGACAATAAAAGAGTAAGATTTTAACTGATCATATTTTTCACGG 1557
consensus_10146#2 ------------------------------------------------------------
consensus_10146#3 ------------------------------------------------------------
consensus_10146#1 ------------------------------------------------------------
consensus_10146#0 AATCGGTCACATATAAGTAAGCTGAAAGTGCACAATACTTTTTCAACAATTGAAAAAAAA 1617
consensus_10146#2 ------------------------------------------------------------
consensus_10146#3 ------------------------------------------------------------
consensus_10146#1 ------------------------------------------------------------
consensus_10146#0 AATCATAATGCATATACTTTTCATGCGGCCCAGTAAACTGCTGCAGCTTGCAGGGCCGGC 1677
consensus_10146#2 ------------------------------------------------------------
consensus_10146#3 ------------------------------------------------------------
consensus_10146#1 ------------------------------------------------------------
consensus_10146#0 CTGTACGTATGCACACGCTAAAAAACATGAAGGATATAGACACTAAAATTCTTTCTGAAG 1737
consensus_10146#2 ------------------------------------------------------------
consensus_10146#3 ------------------------------------------------------------
consensus_10146#1 ------------------------------------------------------------
consensus_10146#0 CGGGTGCAGAGTTTTTTGTTTTTTTTAATCCTCTGTACGTGCGTACCTATGGGCAACAGT 1797
consensus_10146#2 ------------------------------------------------------------
consensus_10146#3 ------------------------------------------------------------
consensus_10146#1 ------------------------------------------------------------
consensus_10146#0 TCTAGCAACTGCTGCTGCTTGTATGCAATGAGGCTGTAGCTTTATGTGTAGCTTTCGCAT 1857
consensus_10146#2 -------------------------------
consensus_10146#3 -------------------------------
consensus_10146#1 -------------------------------
consensus_10146#0 GTCGCTAGGGTCAGGTATATGCACAACTGCA 1888
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||