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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10151#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2124 fasta sequence
[AGTAGGCTATTTATCGCTTTGACTGTTCTACATCTTGCCTCGCCGTGCACCGCAGTCCGCCGCACTACCAGCGCCGGCGCTTACCGTCGTTACCGACGCAGCCTCGCCTACACTACACCCTCGATCCTTCCCCAACCACCACCGCAGCAAATACACCGCCGCGGCGCCGCGCCTCTTGGAGGCTTCGACGCGCGCCCAAAAAGCGACCGCGGCTTCCCGTTCCCGAACACCACCACCCCTCCCCCGAATCGAATCCAATCAAATCCAATCGAATCGCCTCTCCGTCCTCCGCGGCGGCGGGCCGCCATGCCGCTGCCGACGATGACCCACTCCTCCTCCTTCCTCCGCCTCCCCGCCACCTCCTCGCCGCACCCGCCGCCCGCGGATGATGCTTCCGCGGCCTACGCCGTCGTCGTCCTCAACCAGCGCCTGCCCCGCTTCGCCCCCCTCCTCTGGGACCGCGCGCGGCTGCGGGTGTGCGCCGACGGGGGTGCCAACCGGGTGTTCGATGGAATGCCGGAGCTGCTGCCCGCCGAGGACCCGGACCAGGTCCGCATGAGGTGACCGATAGTTTCCAGCCTTATTTATCCCCCCCCCCCCAAAGNAAGNTTAGTGTTCTTTGTTTGCATGTGTCCTCTCCTCGCGCGTTTTGAGTCAGGCTTGGCGGTCATGATGGAATGCGTGGGAGGCGAGTGAATCTTGTTTTCGTTAGTATTTCATTATGCAGAGGAGTGAAACTGTAAATGTTGTCATGGAAGCGAGTACTGTCTAGCTGAACCAGATACCACTAGTTAAGTGTTATTTCTCGATATGTTTATCTCCCATGCTTTACATGTTTCCGTTATTATATGTTTAAGCAAATGCTGAAGTTCCCCTGATATGTTCAAGTTGAGTAATTTAGTATGCAACACCTTATAGATGTTAATTTCCTGTTGGGTTATGGTTTAGTGCTTTAGCTAACGAAGTGCTCTTTCATTTGATGAACTCTGTTAAAAGTTTTGTTCTTATCTGCATGATTGCTAGTTTTGTTTTCGGTGAGCTTAGAATAACATTCTTAAATTAGCCGAAGTTGCCCTCACAGACCTGAATGTACGCGATATTGCGCCAAAGGCTATCTGAAGCCACACAAAATTACTCAAAATCTGGGATGAACTACAGGTCTAAAGCAGCTTCAACTTGTGTCTTCTTCACTATGAACCTTTTTTTCCTATCTTTGGTTGCCAAAGGTTTGGGAGACATTTATGCATCCAACAGAGGAGCATGGCTAGTTGATTTGCCATACCTGGTAGTTGGCAAGAGACTGTTTTCTTTAAATTGTTGGTTGGGTTTAAAGACAGCTTCTTTGTTGGGTGTTCATATATTTATTAATTTGTGCTCATCTTCCTGCAGGTACAAGCCAGATGTGATCAAAGGGGATATGGACTCAATAAGGCCAGAAGTGAAGGAATATTATTCCAATCTGGGTGCCGAAATAGTTGATGAATCACATGATCAGGACACCACTGACCTGCATAAATGTGTATCATTTATCACCAGAAATCCACCTGGCTCTGAAGAGTCTAATCTGTATATTCTTGTTCTTGGTGCACTTGGAGGAAGGTTCGATCATGAGATGGGGAACATCAACGTGTTATATCGCTTCTCAAACATCAGGATTGTCCTCCTGTCTGATGACTGCTCAATCTTTCTGCTCCCAAAGACGCACAGCCACGAGATCCATATCGAGCGATCAATCGAGGGTCCTCATTGTGGATTGATTCCAATGGGTTCACCATCGGCTAGCACTACCACCACAGGGCTCCGGTGGAATTTAGATAATACTAGCATGAGCTACGGTGGACTGATAAGCACATCTAACATCGTGGAAGAGGAAACAGTTAGGATCACTTCAGATTCTGATCTGATTTGGACAATATCACTCCGGAACTGAGCTTTAAATTACCCATAAATGTATCTTGATCCAAATTTTGGCTCCTTAGTATAGCATGGATGGGCTACATTTTTGTAACTTAGATTTTTTTTTCACTGATCTACTGTTAGTAAACAGGAAAGGTATCCATATGTGTAAGCCTCTTGGACATGCATCCATTATAGAAAAAAATATTATTAACTGTGTTTGGTCAA]
[+] EMBL AK064797 [AGTAGGCTATTTATCGCTTTGACTGTTCTACATCTTGCCTCGCCGTGCACCGCAGTCCGCCGCACTACCAGCGCCGGCGCTTACCGTCGTTACCGACGCAGCCTCGCCTACACTACACCCTCGATCCTTCCCCAACCACCACCGCAGCAAATACACCGCCGCGGCGCCGCGCCTCTTGGAGGCTTCGACGCGCGCCCAAAAAGCGACCGCGGCTTCCCGTTCCCGAACACCACCACCCCTCCCCCGAATCGAATCCAATCAAATCCAATCGAATCGCCTCTCCGTCCTCCGCGGCGGCGGGCCGCCATGCCGCTGCCGACGATGACCCACTCCTCCTCCTTCCTCCGCCTCCCCGCCACCTCCTCGCCGCACCCGCCGCCCGCGGATGATGCTTCCGCGGCCTACGCCGTCGTCGTCCTCAACCAGCGCCTGCCCCGCTTCGCCCCCCTCCTCTGGGACCGCGCGCGGCTGCGGGTGTGCGCCGACGGGGGTGCCAACCGGGTGTTCGATGGAATGCCGGAGCTGCTGCCCGCCGAGGACCCGGACCAGGTCCGCATGAGGTGACCGATAGTTTCCAGCCTTATTTATCCCCCCCCCCCCAAAGNAAGNTTAGTGTTCTTTGTTTGCATGTGTCCTCTCCTCGCGCGTTTTGAGTCAGGCTTGGCGGTCATGATGGAATGCGTGGGAGGCGAGTGAATCTTGTTTTCGTTAGTATTTCATTATGCAGAGGAGTGAAACTGTAAATGTTGTCATGGAAGCGAGTACTGTCTAGCTGAACCAGATACCACTAGTTAAGTGTTATTTCTCGATATGTTTATCTCCCATGCTTTACATGTTTCCGTTATTATATGTTTAAGCAAATGCTGAAGTTCCCCTGATATGTTCAAGTTGAGTAATTTAGTATGCAACACCTTATAGATGTTAATTTCCTGTTGGGTTATGGTTTAGTGCTTTAGCTAACGAAGTGCTCTTTCATTTGATGAACTCTGTTAAAAGTTTTGTTCTTATCTGCATGATTGCTAGTTTTGTTTTCGGTGAGCTTAGAATAACATTCTTAAATTAGCCGAAGTTGCCCTCACAGACCTGAATGTACGCGATATTGCGCCAAAGGCTATCTGAAGCCACACAAAATTACTCAAAATCTGGGATGAACTACAGGTCTAAAGCAGCTTCAACTTGTGTCTTCTTCACTATGAACCTTTTTTTCCTATCTTTGGTTGCCAAAGGTTTGGGAGACATTTATGCATCCAACAGAGGAGCATGGCTAGTTGATTTGCCATACCTGGTAGTTGGCAAGAGACTGTTTTCTTTAAATTGTTGGTTGGGTTTAAAGACAGCTTCTTTGTTGGGTGTTCATATATTTATTAATTTGTGCTCATCTTCCTGCAGGTACAAGCCAGATGTGATCAAAGGGGATATGGACTCAATAAGGCCAGAAGTGAAGGAATATTATTCCAATCTGGGTGCCGAAATAGTTGATGAATCACATGATCAGGACACCACTGACCTGCATAAATGTGTATCATTTATCACCAGAAATCCACCTGGCTCTGAAGAGTCTAATCTGTATATTCTTGTTCTTGGTGCACTTGGAGGAAGGTTCGATCATGAGATGGGGAACATCAACGTGTTATATCGCTTCTCAAACATCAGGATTGTCCTCCTGTCTGATGACTGCTCAATCTTTCTGCTCCCAAAGACGCACAGCCACGAGATCCATATCGAGCGATCAATCGAGGGTCCTCATTGTGGATTGATTCCAATGGGTTCACCATCGGCTAGCACTACCACCACAGGGCTCCGGTGGAATTTAGATAATACTAGCATGAGCTACGGTGGACTGATAAGCACATCTAACATCGTGGAAGAGGAAACAGTTAGGATCACTTCAGATTCTGATCTGATTTGGACAATATCACTCCGGAACTGAGCTTTAAATTACCCATAAATGTATCTTGATCCAAATTTTGGCTCCTTAGTATAGCATGGATGGGCTACATTTTTGTAACTTAGATTTTTTTTTCACTGATCTACTGTTAGTAAACAGGAAAGGTATCCATATGTGTAAGCCTCTTGGACATGCATCCATTATAGAAAAAAATATTATTAACTGTGTT ]
[+] EMBL CA764755 [ tAATAAGGCCAGAAGTGAAGGAATATTATTCC ATCTGGGTGCCGAAATAGTTGATGAATCACATGATCAGGACACCACTGACCTGCATAAATGTGTATCATTTATCACCAGAAATCCACCTGGCTCTGAAGAGTCTAATCTGTATATTCTTGTTCTTGGTGCACTTGGAGGAAGGTTCGATCATGAGATGGGGAACATCAACGTGTTATATCGCTTCTCAAATATCAGGATTGTCCTCCTGTCTGATGACTGCTCAATCTTTCTGCTCCCAAAGACGCACAGCCACGAGATCCATATCGAGCGATCAATCGAGGGTCCTCATTGTGGATTGATTCCAATGGGCTCACCATCGGCTAGCACTACCACCACAGGGCTCCGGTGGAATTTAGATAATACTAGCATGAGCTACGGTGGACTGATAAGCACATCTAACATCGTGGAAGAGGAAACAGTTAGTATCACTTCAGATTCTGATCTGATTTGGACAATATCACTCCGGAACTGAGCTTTAAATTACCCATAAATGTATCTTGATCCAAATTTTGGCTCCTTAGTATAGCATGGATGGGCTACATTTTTGTAACTTAGA TTTTTTTTCACTGATCTACTGTTAGTAAACAGGAAAGGTATCCATATGTGTAAGCCTCTTGGACATGCATCCATTATAGAAAAAAATATTATTAACTGGGGTTGGTCAA]
consensusID : consensus_10151#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1258 fasta sequence
[TCTTGCCTCGCCGTGCACCGCAGTCCGCCGCACTACCAGCGCCGGCGCTTACCGTCGTTACCGACGCAGCCTCGCCTACACTACACCCTCGATCCTTCCCCAACCACCACCGCAGCAAATACACCGCCGCGGCGCCGCGCCTCTTGGAGGCTTCGACGCGCGCCCAAAAAGCGACCGCGGCTTCCCGTTCCCGAACACCACCACCCCTCCCCCGAATCGAATCCAATCAAATCCAATCGAATCGCCTCTCCGTCCTCCGCGGCGGCGGGCCGCCATGCCGCTGCCGACGATGACCCACTCCTCCTCCTTCCTCCGCCTCCCCGCCACCTCCTCGCCGCACCCGCCGCCCGCGGATGATGCTTCCGCGGCCTACGCCGTCGTCGTCCTCAACCAGCGCCTGCCCCGCTTCGCCCCCCTCCTCTGGGACCGCGCGCGGCTGCGGGTGTGCGCCGACGGGGGTGCCAACCGGGTGTTCGATGGAATGCCGGAGCTGCTGCCCGCCGAGGACCCGGACCAGGTCCGCATGAGGTACAAGCCAGATGTGATCAAAGGGGATATGGACTCAATAAGGCCAGAAGTGAAGGAATATTATTCCAATCTGGGTGCCGAAATAGTTGATGAATCACATGATCAGGACACCACTGACCTGCATAAATGTGTATCATTTATCACCAGAAATCCACCTGGCTCTGAAGAGTCTAATCTGTATATTCTTGTTCTTGGTGCACTTGGAGGAAGGTTCGATCATGAGATGGGGAACATCAACGTGTTATATCGCTTCTCAAACATCAGGATTGTCCTCCTGTCTGATGACTGCTCAATCTTTCTGCTCCCAAAGACGCACAGCCACGAGATCCATATCGAGCGATCAATCGAGGGTCCTCATTGTGGATTGATTCCAATGGGTTCACCATCGGCTAGCACTACCACCACAGGGCTCCGGTGGAATTTAGATAATACTAGCATGAGCTACGGTGGACTGATAAGCACATCTAACATCGTGGAAGAGGAAACAGTTAGGATCACTTCAGATTCTGATCTGATTTGGACAATATCACTCCGGAACTGAGCTTTAAATTACCCATAAATGTATCTTGATCCAAATTTTGGCTCCTTAGTATAGCATGGATGGGCTACATTTTTGTAACTTAGATTTTTTTTTTCATTGATCTACTGTTAGTAAACAGGAAAGGTATCCATATGTGTAAGCCTCTTGGACATGCATCCATTATAGAAAAAAATATTATTAACTGTGTTG]
[+] EMBL AK105048 [TCTTGCCTCGCCGTGCACCGCAGTCCGCCGCACTACCAGCGCCGGCGCTTACCGTCGTTACCGACGCAGCCTCGCCTACACTACACCCTCGATCCTTCCCCAACCACCACCGCAGCAAATACACCGCCGCGGCGCCGCGCCTCTTGGAGGCTTCGACGCGCGCCCAAAAAGCGACCGCGGCTTCCCGTTCCCGAACACCACCACCCCTCCCCCGAATCGAATCCAATCAAATCCAATCGAATCGCCTCTCCGTCCTCCGCGGCGGCGGGCCGCCATGCCGCTGCCGACGATGACCCACTCCTCCTCCTTCCTCCGCCTCCCCGCCACCTCCTCGCCGCACCCGCCGCCCGCGGATGATGCTTCCGCGGCCTACGCCGTCGTCGTCCTCAACCAGCGCCTGCCCCGCTTCGCCCCCCTCCTCTGGGACCGCGCGCGGCTGCGGGTGTGCGCCGACGGGGGTGCCAACCGGGTGTTCGATGGAATGCCGGAGCTGCTGCCCGCCGAGGACCCGGACCAGGTCCGCATGAGGTACAAGCCAGATGTGATCAAAGGGGATATGGACTCAATAAGGCCAGAAGTGAAGGAATATTATTCCAATCTGGGTGCCGAAATAGTTGATGAATCACATGATCAGGACACCACTGACCTGCATAAATGTGTATCATTTATCACCAGAAATCCACCTGGCTCTGAAGAGTCTAATCTGTATATTCTTGTTCTTGGTGCACTTGGAGGAAGGTTCGATCATGAGATGGGGAACATCAACGTGTTATATCGCTTCTCAAACATCAGGATTGTCCTCCTGTCTGATGACTGCTCAATCTTTCTGCTCCCAAAGACGCACAGCCACGAGATCCATATCGAGCGATCAATCGAGGGTCCTCATTGTGGATTGATTCCAATGGGTTCACCATCGGCTAGCACTACCACCACAGGGCTCCGGTGGAATTTAGATAATACTAGCATGAGCTACGGTGGACTGATAAGCACATCTAACATCGTGGAAGAGGAAACAGTTAGGATCACTTCAGATTCTGATCTGATTTGGACAATATCACTCCGGAACTGAGCTTTAAATTACCCATAAATGTATCTTGATCCAAATTTTGGCTCCTTAGTATAGCATGGATGGGCTACATTTTTGTAACTTAGATTTTTTTTTTCATTGATCTACTGTTAGTAAACAGGAAAGGTATCCATATGTGTAAGCCTCTTGGACATGCATCCATTATAGAAAAAAATATTATTAACTGTGTTG]
consensusID : consensus_10151#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1222 fasta sequence
[GCTCGCACGACCGCGACGAGCCCACGACTCGCAAGTCGCACCCTCCCCGACCCCGATCGGCGCGAAGCCACCCACTTCCAGCCCTCGCCGTCGCCGCGCCGCCGCCGCCGCCGCCATGGCCCCGAGGCCGGCCATGTCCCACTCCTCCGCCTTCCTGCTGCCCTCGCCGTCCGCGGCGGCGGCGGGCGCCGACGCCGACGGCGCCGCCTACGCGCTCCTCGTCCTCAACCAGCGCCTGCCCCGCTTCGCGCCCCGCCTCTGGGACCGCGCGCAGGTGCGGGTGTGCGCGGACGGCGGCGCCAACCGGGTGTTCGACGGCATGCCGGAGCTGTTTCCTGGACAGGACCCCGACGAGGTTCGCCGCAGATACAAACCAGATGTAATCAAAGGAGATCTGGACTCAGTTCGACCAGAAGTGAAGGAATATTATTCCAATATGGGTACTCAAATAGTCGATGAGTCACATGATCAGGACACCACCGATTTACACAAATGTGTAGCTTTTATCACTGAGAATTCGGCCATCCCCAACAAATCTAATCTGTGTATCTTTGCTCTTGGGGCCCTTGGGGGAAGGTTTGACCACGAGATGGGAAACATCAACGTACTTCATCTCTTCCCAAACAACAGGATCATACTCCTATCGGATGATTGCTTGATCTTTCTGCTGCCAAGAACACACACTCATAACATCCATATTGAACGGTCTATTGAGGGGCCCCACTGTGGATTGATTCCCATCGGCGCGCCTTCGGCCACCACCACAACCACTGGGCTTCAATGGAATTTAGATAATACCAGCATGAGCTTTGGTGGACTTATTAGCACATCAAACATTGTGAGAGAGGAGAGTACTGTTGTTACGATCACTTCAGATTCTGACCTGATTTGGACAATATCGCTCCGGCACCACTCTTGAAATACGTAACACAATTGTATCATAGTTCCAATTTTGTCTCATCTATTTTACGTCGTTGAGTTCTACCCTTAGTAGAAGAGTGAAAACATACATGGCATCTGATGTGGCTAAACCTGGTGAAATGTTAATATGTAACTTAGAGGACTTGGCACGTCTCTAAATATATACCTTGCACTGTAATTGCACAATTTTTTTTTTTTGTAAACATGTCACCAAATTACCTGTAATGTAAAGAACCAGTTGTATTTGTTAAGCAAACTCCATATTTTTCCTTCAAAAAGGGAAATACAATCTTGAGGGGGG]
[+] EMBL AK108439 [GCTCGCACGACCGCGACGAGCCCACGACTCGCAAGTCGCACCCTCCCCGACCCCGATCGGCGCGAAGCCACCCACTTCCAGCCCTCGCCGTCGCCGCGCCGCCGCCGCCGCCGCCATGGCCCCGAGGCCGGCCATGTCCCACTCCTCCGCCTTCCTGCTGCCCTCGCCGTCCGCGGCGGCGGCGGGCGCCGACGCCGACGGCGCCGCCTACGCGCTCCTCGTCCTCAACCAGCGCCTGCCCCGCTTCGCGCCCCGCCTCTGGGACCGCGCGCAGGTGCGGGTGTGCGCGGACGGCGGCGCCAACCGGGTGTTCGACGGCATGCCGGAGCTGTTTCCTGGACAGGACCCCGACGAGGTTCGCCGCAGATACAAACCAGATGTAATCAAAGGAGATCTGGACTCAGTTCGACCAGAAGTGAAGGAATATTATTCCAATATGGGTACTCAAATAGTCGATGAGTCACATGATCAGGACACCACCGATTTACACAAATGTGTAGCTTTTATCACTGAGAATTCGGCCATCCCCAACAAATCTAATCTGTGTATCTTTGCTCTTGGGGCCCTTGGGGGAAGGTTTGACCACGAGATGGGAAACATCAACGTACTTCATCTCTTCCCAAACAACAGGATCATACTCCTATCGGATGATTGCTTGATCTTTCTGCTGCCAAGAACACACACTCATAACATCCATATTGAACGGTCTATTGAGGGGCCCCACTGTGGATTGATTCCCATCGGCGCGCCTTCGGCCACCACCACAACCACTGGGCTTCAATGGAATTTAGATAATACCAGCATGAGCTTTGGTGGACTTATTAGCACATCAAACATTGTGAGAGAGGAGAGTACTGTTGTTACGATCACTTCAGATTCTGACCTGATTTGGACAATATCGCTCCGGCACCACTCTTGAAATACGTAACACAATTGTATCATAGTTCCAATTTTGTCTCATCTATTTTACGTCGTTGAGTTCTACCCTTAGTAGAAGAGTGAAAACATACATGGCATCTGATGTGGCTAAACCTGGTGAAATGTTAATATGTAACTTAGAGGACTTGGCACGTCTCTAAATATATACCTTGCACTGTAATTGCACAATTTTTTTTTTTTGTAAACATGTCACCAAATTACCTGTAATGTAAAGAACCAGTTGTATTTGTTAAGCAAACTCCAT ]
[+] EMBL CB685942 [ AGCCCTCGCCGTCGCCGCGCCGCCGCCGCCGCCGCCATGGCCCCGAGGCCGGCCATGTCCCACTCCTCCGCCTTCCTGCTGCCCTCGCCGTCCGCGGCGGCGGCGGGCGCCGACGCCGACGGCGCCGCCTACACGCTCCTCCTCCTCAAACAGCGCCTGCCCCGCTTCTCGCCCCGCCTCTGGGACCGCCCGCAAGTGCGGGTGTGCGCGGACGGCGGCGCCCACCGGGTGTTCGACGGCATGCCTGAGC ]
[-] EMBL CB685943 [ AATATTATTCCAATATGGGTACTCAAATAGTCGATGAGTCACATGATCAGGACACCACCGATTTACACAAATGTGTAGCTTTTATCACTGAGAATTCGGCCATCCCCAACAAATCTAATCTGTGTATCTTTGCTCTTGGGGCCCTTGGGGGAAGGTTTGACCACGAGATGGGAAACATCAACGTACTTCATCTCTTCCCAAACAACAGGATCATACTCCTATCGGATGATTGCTTGATCTTTCTGCTGCCAAGAACACACACTCATAACATCCATATTGAACGGTCTATTGAGGGGCCCCACTGTGGATTGATTCCCATCGGCGCGCCTTCGGCCACCACCACAACCACTGGGCTTCAATGGAATTTAGATAATACCAGCATGAGCTTTGGTGGACTTATTAGCACATCAAACATTGTGAGAGAGGAGAGTACTGTTGTTACGATCACTTCAGATTCTGACCTGATTTGGACAATATCGCTCCGGCACCACTCTTGAAATACGTAACACAATTGTATCATAGTTCCAATTTTGTCTCATCTATTTTACGTCGTTGAGTTTTACCCTTAGTAGAAGAGTGAAAACATACATGGCATCTGATGTGGCTAAACCTGGTGAAATGTTAATATGTATCTTAGAGGACTTGGCACGTCTCTAAATATATCCCCTGCAAGGTAATTGCACAATTTTTTTTTTTCGTAAACATGTCACCAAATTCCCTGTAATGTAAAGAACGGGTAGTATTTGTTAAGCACATTCCATATTTTTCCTTCAAAAAGGGAAATACAATCTTGAGGGGGG]
consensusID : consensus_10151#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 434 fasta sequence
[AGTTTATTATATCCGCACAGACAAAGGTTGAACAAGAATCCGTCTTATGTTCCAAATTGCTTATGCGGAATCAGAGTTTGAGAGATGGTCACATATTTCAGATGATCTTAATGGCTGATAATCGGAAACAAATATCGAAGTATTTTGGGTTTGCCTTTTTTTACAAAAAGATTTCTCATGTAAAATTCACAAGTGTTTTGGTGCAGATACAAACCAGATGTAATCAAAGGAGATCTGGACTCAGTTCGACCAGAAGTGAAGGAATATTATTCCAATATGGGTACTCAAATAGTCGATGAGTCACATGATCAGGACANCACCGATTTACACAAATGTGTAGGCTTTTTATCACTGAGAATTCGGNCATCCCCAACAAATCTTATCTGGGGNACCTTGCTCTTGGGCCCTTGGGGGGAGGTTTNACCCNGAGATGG]
[+] EMBL OSS1780A [AGTTTATTATATCCGCACAGACAAAGGTTGAACAAGAATCCGTCTTATGTTCCAAATTGCTTATGCGGAATCAGAGTTTGAGAGATGGTCACATATTTCAGATGATCTTAATGGCTGATAATCGGAAACAAATATCGAAGTATTTTGGGTTTGCCTTTTTTTACAAAAAGATTTCTCATGTAAAATTCACAAGTGTTTTGGTGCAGATACAAACCAGATGTAATCAAAGGAGATCTGGACTCAGTTCGACCAGAAGTGAAGGAATATTATTCCAATATGGGTACTCAAATAGTCGATGAGTCACATGATCAGGACANCACCGATTTACACAAATGTGTAGGCTTTTTATCACTGAGAATTCGGNCATCCCCAACAAATCTTATCTGGGGNACCTTGCTCTTGGGCCCTTGGGGGGAGGTTTNACCCNGAGATGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 AGTAGGCTATTTATCGCTTTGACTGTTCTACATCTTGCCTCGCCGTGCACCGCAGTCCGC 60
consensus_10151#1 --------------------------------TCTTGCCTCGCCGTGCACCGCAGTCCGC 28
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 CGCACTACCAGCGCCGGCGCTTACCGTCGTTACCGACGCAGCCTCGCCTACACTACACCC 120
consensus_10151#1 CGCACTACCAGCGCCGGCGCTTACCGTCGTTACCGACGCAGCCTCGCCTACACTACACCC 88
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 TCGATCCTTCCCCAACCACCACCGCAGCAAATACACCGCCGCGGCGCCGCGCCTCTTGGA 180
consensus_10151#1 TCGATCCTTCCCCAACCACCACCGCAGCAAATACACCGCCGCGGCGCCGCGCCTCTTGGA 148
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 GGCTTCGACGCGCGCCCAAAAAGCGACCGCGGCTTCCCGTTCCCGAACACCACCACCCCT 240
consensus_10151#1 GGCTTCGACGCGCGCCCAAAAAGCGACCGCGGCTTCCCGTTCCCGAACACCACCACCCCT 208
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 CCCCCGAATCGAATCCAATCAAATCCAATCGAATCGCCTCTCCGTCCTCCGCGGCGGCGG 300
consensus_10151#1 CCCCCGAATCGAATCCAATCAAATCCAATCGAATCGCCTCTCCGTCCTCCGCGGCGGCGG 268
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 GCCGCCATGCCGCTGCCGACGATGACCCACTCCTCCTCCTTCCTCCGCCTCCCCGCCACC 360
consensus_10151#1 GCCGCCATGCCGCTGCCGACGATGACCCACTCCTCCTCCTTCCTCCGCCTCCCCGCCACC 328
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 TCCTCGCCGCACCCGCCGCCCGCGGATGATGCTTCCGCGGCCTACGCCGTCGTCGTCCTC 420
consensus_10151#1 TCCTCGCCGCACCCGCCGCCCGCGGATGATGCTTCCGCGGCCTACGCCGTCGTCGTCCTC 388
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 AACCAGCGCCTGCCCCGCTTCGCCCCCCTCCTCTGGGACCGCGCGCGGCTGCGGGTGTGC 480
consensus_10151#1 AACCAGCGCCTGCCCCGCTTCGCCCCCCTCCTCTGGGACCGCGCGCGGCTGCGGGTGTGC 448
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 GCCGACGGGGGTGCCAACCGGGTGTTCGATGGAATGCCGGAGCTGCTGCCCGCCGAGGAC 540
consensus_10151#1 GCCGACGGGGGTGCCAACCGGGTGTTCGATGGAATGCCGGAGCTGCTGCCCGCCGAGGAC 508
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 CCGGACCAGGTCCGCATGAGGTGACCGATAGTTTCCAGCCTTATTTATCCCCCCCCCCCC 600
consensus_10151#1 CCGGACCAGGTCCGCATGAGGT-------------------------------------- 530
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 AAAGNAAGNTTAGTGTTCTTTGTTTGCATGTGTCCTCTCCTCGCGCGTTTTGAGTCAGGC 660
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 TTGGCGGTCATGATGGAATGCGTGGGAGGCGAGTGAATCTTGTTTTCGTTAGTATTTCAT 720
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 TATGCAGAGGAGTGAAACTGTAAATGTTGTCATGGAAGCGAGTACTGTCTAGCTGAACCA 780
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 GATACCACTAGTTAAGTGTTATTTCTCGATATGTTTATCTCCCATGCTTTACATGTTTCC 840
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 GTTATTATATGTTTAAGCAAATGCTGAAGTTCCCCTGATATGTTCAAGTTGAGTAATTTA 900
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 ------------------------------------------------------------
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 GTATGCAACACCTTATAGATGTTAATTTCCTGTTGGGTTATGGTTTAGTGCTTTAGCTAA 960
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 -------------------GCTCGCACGACCGCGACGAGCCCACGACTCGCAAGTCGCAC 41
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 CGAAGTGCTCTTTCATTTGATGAACTCTGTTAAAAGTTTTGTTCTTATCTGCATGATTGC 1020
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 CCTCCCCGACCCCGATCGGCGCGAAGCCACCCACTTCCAGCCCTCGCCGTCGCCG-CGCC 100
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 TAGTTTTGTTTTCGGTGAGCTTAGAATAACATTCTTAAATTAGCCGAAGTTGCCCTCACA 1080
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 GCCGCCGCCGCCGCCATGGCCCCGAGGCCGGCCATGTCCCACTCCTCCGCCTTCCT-GCT 159
consensus_10151#3 -----------------------------------------------------------A 1
consensus_10151#0 GACCTGAATGTACGCGATATTGCGCCAAAGGCTATCTGAAGCCACACAAAATTACTCAAA 1140
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 GCCCTCGCCGTCCGCGGCGGCGGCGGGCGCCGACGCCGACGGCGCCGCCTACGCG----- 214
consensus_10151#3 GTTTATTATATCCGCACAGACAAAGGTTGAACAAGAATCCGTCTTATGTTCCAAA----- 56
consensus_10151#0 ATCTGGGATGAACTACAGGTCTAAAGCAGCTTCAACTTGTGTCTTCTTCACTATGAACCT 1200
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 ---CTCCTCGTCCTCAACC----AGCGCCTGCCCCGCT-TCGCGCCCCGCCTCTGGGACC 266
consensus_10151#3 ---TTGCTTATGCGGAATC----AGAGTTTGAGAGATGGTCACATATTTCAGATGATCTT 109
consensus_10151#0 TTTTTTCCTATCTTTGGTTGCCAAAGGTTTGGGAGACATTTATGCATCCAACAGAGGAGC 1260
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 GCGCGCAGGTGC------------GGGTGTGCGCGGACGGCGGCGCCAACCGGGTGTTCG 314
consensus_10151#3 AATGGCTGATA--------------ATCGGAAACAAATATCGAAGTATTTTGGGTTTGCC 155
consensus_10151#0 ATGGCTAGTTGATTTGCCATACCTGGTAGTTGGCAAGAGACTGTTTTCTTTAAATTGTTG 1320
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 ACGGCATGCCGGAGCTGTTTCCTGGACAG-----------------GACCCCGACGAGGT 357
consensus_10151#3 TTTTTTTACAAAAAG-ATTTCTCATGTAA-----------------AATTCACAAGTGTT 197
consensus_10151#0 GTTGGGTTTAAAGACAGCTTCTTTGTTGGGTGTTCATATATTTATTAATTTGTGCTCATC 1380
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 TCGCCGCAGATACAAACCAGATGTAATCAAAGGAGATCTGGACTCAGTTCGACCAGAAGT 417
consensus_10151#3 TTGGTGCAGATACAAACCAGATGTAATCAAAGGAGATCTGGACTCAGTTCGACCAGAAGT 257
consensus_10151#0 TTCCTGCAGGTACAAGCCAGATGTGATCAAAGGGGATATGGACTCAATAAGGCCAGAAGT 1440
consensus_10151#1 -----------ACAAGCCAGATGTGATCAAAGGGGATATGGACTCAATAAGGCCAGAAGT 579
**** ******** ******** *** ******** * * ********
consensus_10151#2 GAAGGAATATTATTCCAATATGGGTACTCAAATAGTCGATGAGTCACATGATCAGGACAC 477
consensus_10151#3 GAAGGAATATTATTCCAATATGGGTACTCAAATAGTCGATGAGTCACATGATCAGGACAN 317
consensus_10151#0 GAAGGAATATTATTCCAATCTGGGTGCCGAAATAGTTGATGAATCACATGATCAGGACAC 1500
consensus_10151#1 GAAGGAATATTATTCCAATCTGGGTGCCGAAATAGTTGATGAATCACATGATCAGGACAC 639
******************* ***** * ******* ***** ****************
consensus_10151#2 CACCGATTTACACAAATGTGTAG--CTTTTATCACTGAGAATTCGGCCATCCCCAACAAA 535
consensus_10151#3 CACCGATTTACACAAATGTGTAGGCTTTTTATCACTGAGAATTCGGNCATCCCCAACAAA 377
consensus_10151#0 CACTGACCTGCATAAATGTGTAT--CATTTATCACCAGAAATCCACCTGGCTCTGAAGAG 1558
consensus_10151#1 CACTGACCTGCATAAATGTGTAT--CATTTATCACCAGAAATCCACCTGGCTCTGAAGAG 697
*** ** * ** ********* ******** *** * * * * *
consensus_10151#2 TCTAATCTGTGTATCTTTGCTCTTGGGGCCCTTGGGGGAAGGTTTGACCACGAGATGGGA 595
consensus_10151#3 TCTTATCTGGGGNACCTTGCTCTTGGG-CCCTTGGGGGGAGGTTTNACCCNGAGATGG-- 434
consensus_10151#0 TCTAATCTGTATATTCTTGTTCTTGGTGCACTTGGAGGAAGGTTCGATCATGAGATGGGG 1618
consensus_10151#1 TCTAATCTGTATATTCTTGTTCTTGGTGCACTTGGAGGAAGGTTCGATCATGAGATGGGG 757
*** ***** *** ****** * ***** ** ***** * * *******
consensus_10151#2 AACATCAACGTACTTCATCTCTTCCCAAACAACAGGATCATACTCCTATCGGATGATTGC 655
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 AACATCAACGTGTTATATCGCTTCTCAAACATCAGGATTGTCCTCCTGTCTGATGACTGC 1678
consensus_10151#1 AACATCAACGTGTTATATCGCTTCTCAAACATCAGGATTGTCCTCCTGTCTGATGACTGC 817
consensus_10151#2 TTGATCTTTCTGCTGCCAAGAACACACACTCATAACATCCATATTGAACGGTCTATTGAG 715
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 TCAATCTTTCTGCTCCCAAAGACGCACAGCCACGAGATCCATATCGAGCGATCAATCGAG 1738
consensus_10151#1 TCAATCTTTCTGCTCCCAAAGACGCACAGCCACGAGATCCATATCGAGCGATCAATCGAG 877
consensus_10151#2 GGGCCCCACTGTGGATTGATTCCCATCGGCGCGCCTTCGGCCACCACCACAACCACTGGG 775
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 GGTCCTCATTGTGGATTGATTCCAATGGGTTCACCATCGGCTAGCACTACCACCACAGGG 1798
consensus_10151#1 GGTCCTCATTGTGGATTGATTCCAATGGGTTCACCATCGGCTAGCACTACCACCACAGGG 937
consensus_10151#2 CTTCAATGGAATTTAGATAATACCAGCATGAGCTTTGGTGGACTTATTAGCACATCAAAC 835
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 CTCCGGTGGAATTTAGATAATACTAGCATGAGCTACGGTGGACTGATAAGCACATCTAAC 1858
consensus_10151#1 CTCCGGTGGAATTTAGATAATACTAGCATGAGCTACGGTGGACTGATAAGCACATCTAAC 997
consensus_10151#2 ATTGTGAGAGAGGAGAGTACTGTTGTTACGATCACTTCAGATTCTGACCTGATTTGGACA 895
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 ATCGTGGAAGAGGAAA------CAGTTAGGATCACTTCAGATTCTGATCTGATTTGGACA 1912
consensus_10151#1 ATCGTGGAAGAGGAAA------CAGTTAGGATCACTTCAGATTCTGATCTGATTTGGACA 1051
consensus_10151#2 ATATCGCTCCGGCACCACTCTTGAAATACGTAACACAATTGTATCATAGTTCCAATTTTG 955
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 ATATCACTCCGGAACTGAGCTTTAAATTACC--CATAAATGTATCTTGATCCAAATTTTG 1970
consensus_10151#1 ATATCACTCCGGAACTGAGCTTTAAATTACC--CATAAATGTATCTTGATCCAAATTTTG 1109
consensus_10151#2 TCTCATCTATTTTACGTCGTTGAGTTCTACCCTTAGTAGAAGAGTGAAAACATACATGGC 1015
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 GCTCCTTAGTATAGCATGGATGGGCTACATTTTTGTAACTTAGATTTTTTTTT-CACTGA 2029
consensus_10151#1 GCTCCTTAGTATAGCATGGATGGGCTACATTTTTGTAACTTAGATTTTTTTTTTCATTGA 1169
consensus_10151#2 ATCTGATGTGGCTAAACCTGGTGAAATGTTAATATGTAA---CTTAGAGGACTTGGCACG 1072
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 TCTACTGTTAGTAAACAGGAAAGGTATCCATATGTGTAAGCCTCTTGGACATGCATCCAT 2089
consensus_10151#1 TCTACTGTTAGTAAACAGGAAAGGTATCCATATGTGTAAGCCTCTTGGACATGCATCCAT 1229
consensus_10151#2 TCTCTAAATATATACCTTGCACTGTAATTGCACAATTTTTTTTTTTTGTAAACATGTCAC 1132
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 TATAGAAAAAAATATTATTAACTGTGTTTGGTCAA------------------------- 2124
consensus_10151#1 TATAGAAAAAAATATTATTAACTGTGTTG------------------------------- 1258
consensus_10151#2 CAAATTACCTGTAATGTAAAGAACCAGTTGTATTTGTTAAGCAAACTCCATATTTTTCCT 1192
consensus_10151#3 ------------------------------------------------------------
consensus_10151#0 ------------------------------------------------------------
consensus_10151#1 ------------------------------------------------------------
consensus_10151#2 TCAAAAAGGGAAATACAATCTTGAGGGGGG 1222
consensus_10151#3 ------------------------------
consensus_10151#0 ------------------------------
consensus_10151#1 ------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||