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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10159#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2476 fasta sequence
[GAGAGAGAAAGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAATGGCCGCGGCGGCGCGGGAGGAGGAGGAGGCGTCGACGGCGGCGAGGAGCCGGCAGGAGAGCGAGGGGGAGGAGGAGGAGGTGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGAGGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCGGAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGGAGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGTAAGGATAACACTCTCACCATCATATGTCCATATTCGTCCATTTCTACCTGTACTTTTTCTTTGAAAAGATTCTGGTCAAAAACTGCTCTCGAGGTAAACATGTAAAACCACCTGAGGTTACTTGCTATTGCTATTGATAGGAACTAGGAAAACCTCCTATTTGGAACATGCTTTGAGTCAATTTTAGAATGTACCATTACCACTGGTGAATATTATTACACCGAATAGATTTTTTCATCACTGATGTATTGCCTATTAGGGCTGAGAAAAAAATGTTTGTTGTGTACTTGTGTATTTTGAACTGTGCATTTCTGTATTTTTACCTTCTTGCTTCTTTCTTTAGTTTACATGTAATCTACAAGCCATAGGTTTATGTTGTAATTTCTCTTGTTATACCACTGACAGTTTCTTGAAATGCGGGCCCTTATCAGCAAAGTCGTCCTTTCCATAGTCCTATCCTTGAGTTGTTAATGCAGGACATGTTTGACTTGTCAATGTGTGCTACATTTGCTTACACAATTATGTATGTCTGTGGCATGTCTTAAACCTAGTCAGCCTGATAAGCATCATGCTTTTTTTATTTCAAATTGTGATTCATTCTGTATAGGATAAGTTCTAGTGAGATGTTCTTTACTTATATTATATGGTACTGTGAATCAGACTGCACGTTGGACTTGCCAATATTTTACTCATTTAATAGCCATTTCAGTCTTGAAATACTAAATATAAATTGCTATCTCAGTTCTTATGTAAAAAATGTTATTGGAATTTATTGCATCACTCTATATTACATATGTGCATCAATTTTCTTGAAATTATCCTTTGTTCATAAATCTGACAGAAGATTAAAATTGTTTCAGGCCATGGTTTACTTAATTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGTACGTATTTCTTGGCATTACCATTTTTCATTTAAAGCATTGAAACAGGTTGTTATTGTGCAGCCTAGTATTAGTGCTTAACTGCTTAATGCAGTTGGTTGTCTCTTCTTTTCATTTGCATCACACAGTATGGCTATGAATGCTTAACTCAAACAAATGAAAACTAAATCCTGCTGGTCTTGATAGTTTGGACTTTGGATACCTGCCATAGTTATGTTGTCAACATACGGGTAGATATAAATATGAGCACTTCAATTTAGGAATTGCCAAGCACAAAGTTTGGAGAAAATCCAGCCATCTCATTGACTGTCTTTTTTTGTGATTAAGCTGATTGTGCACCTTCGTTTCTTTTCCTTGACTTTTTTTTCCTGATACAGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCA-GCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAACTTCCAACTTTCAGGGACAAATTGACATGAATCAAATGA]
[+] EMBL AK070185 [GAGAGAGAAAGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAATGGCCGCGGCGGCGCGGGAGGAGGAGGAGGCGTCGACGGCGGCGAGGAGCCGGCAGGAGAGCGAGGGGGAGGAGGAGGAGGTGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGAGGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCGGAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGGAGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGTAAGGATAACACTCTCACCATCATATGTCCATATTCGTCCATTTCTACCTGTACTTTTTCTTTGAAAAGATTCTGGTCAAAAACTGCTCTCGAGGTAAACATGTAAAACCACCTGAGGTTACTTGCTATTGCTATTGATAGGAACTAGGAAAACCTCCTATTTGGAACATGCTTTGAGTCAATTTTAGAATGTACCATTACCACTGGTGAATATTATTACACCGAATAGATTTTTTCATCACTGATGTATTGCCTATTAGGGCTGAGAAAAAAATGTTTGTTGTGTACTTGTGTATTTTGAACTGTGCATTTCTGTATTTTTACCTTCTTGCTTCTTTCTTTAGTTTACATGTAATCTACAAGCCATAGGTTTATGTTGTAATTTCTCTTGTTATACCACTGACAGTTTCTTGAAATGCGGGCCCTTATCAGCAAAGTCGTCCTTTCCATAGTCCTATCCTTGAGTTGTTAATGCAGGACATGTTTGACTTGTCAATGTGTGCTACATTTGCTTACACAATTATGTATGTCTGTGGCATGTCTTAAACCTAGTCAGCCTGATAAGCATCATGCTTTTTTTATTTCAAATTGTGATTCATTCTGTATAGGATAAGTTCTAGTGAGATGTTCTTTACTTATATTATATGGTACTGTGAATCAGACTGCACGTTGGACTTGCCAATATTTTACTCATTTAATAGCCATTTCAGTCTTGAAATACTAAATATAAATTGCTATCTCAGTTCTTATGTAAAAAATGTTATTGGAATTTATTGCATCACTCTATATTACATATGTGCATCAATTTTCTTGAAATTATCCTTTGTTCATAAATCTGACAGAAGATTAAAATTGTTTCAGGCCATGGTTTACTTAATTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGTACGTATTTCTTGGCATTACCATTTTTCATTTAAAGCATTGAAACAGGTTGTTATTGTGCAGCCTAGTATTAGTGCTTAACTGCTTAATGCAGTTGGTTGTCTCTTCTTTTCATTTGCATCACACAGTATGGCTATGAATGCTTAACTCAAACAAATGAAAACTAAATCCTGCTGGTCTTGATAGTTTGGACTTTGGATACCTGCCATAGTTATGTTGTCAACATACGGGTAGATATAAATATGAGCACTTCAATTTAGGAATTGCCAAGCACAAAGTTTGGAGAAAATCCAGCCATCTCATTGACTGTCTTTTTTTGTGATTAAGCTGATTGTGCACCTTCGTTTCTTTTCCTTGACTTTTTTTTCCTGATACAGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCA GCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAACTTCCAACTTTCAGGGACAAATTGACATGAATCAAATGA]
[-] EMBL CF319962 [ CCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCACCGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGACCCACTCGTCCCATCAGATCTACCAGACCAGTAGGATAATACCAGTTGCCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATGGGCGNCGNCAGGCNCCCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAAaaaaaaa ]
consensusID : consensus_10159#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 882 fasta sequence
[GGGAGGNNAGGATAACACTCTACACCATCATATGTCCATATTCGACCATTTCTACCTGNNCTNTTNCTTTGAAAAGATTCTGGTCAAAAACTGCTCTGGGGGTAAACATGTNAAACCACCTGAGGTTACTTGCTATNGNTATNGATAGGAACTAGGNAAACCTNCTATTTGNAACATGCTTTGNGTCAATTNTAGAATGTACCATTACCACTGNNGANTATTATTACACCGNATAGATTTTTTCATCACTGATGTNTTGCCTATTANGGCTGAGAAAAAAATGTTNGGTGTGTACTTGNGTACTTTGAACTGNGCANTNCTGTATTNTTACCTTATTGCTTCCTTCTTTAGTTTACATGNNATNTACAAGCCATAGGATTATGTTGTNATTTCTCTTGTTATACCACTGACAGGTNCTTGAAATGCGGGCCCTTATCANCAAAGTCGNNCTTTCCATAGTCCTATCCTTGAGTTGATAATGCAGGACATGNTTGACTTGNCAATGTGNGCTACATTAGCTTACACAANTATGTATGNCTGNGGCATGNCTTAAACCTAGNCANCCTGATAAGCATCATGCTNTNNTTATTTCAAATTGAGATTCATTCTGTATAGGATAAGTTCTAGTGAGATGNTCTNTACTTATATTATATGGTACTGGGNATCAAACTGCACGGTGGTCTTGCCAATANTTTACTCATNTAATAGNCATTTTCAGTCTTGAAATACTAAANATAAANTGCTATCTCAGTTCTTATGTAAAAAAGGTATNGGAATGNATTGCATCACTCTATATTACATAAGGGCATCAAATTTCTTGAAATATACCTTTGCTCNTAAATCTGACAGAANATTAAATTGGTTTAGGCCATGGCTTACTTA]
[+] EMBL CA765381 [GGGAGGNNAGGATAACACTCTACACCATCATATGTCCATATTCGACCATTTCTACCTGNNCTNTTNCTTTGAAAAGATTCTGGTCAAAAACTGCTCTGGGGGTAAACATGTNAAACCACCTGAGGTTACTTGCTATNGNTATNGATAGGAACTAGGNAAACCTNCTATTTGNAACATGCTTTGNGTCAATTNTAGAATGTACCATTACCACTGNNGANTATTATTACACCGNATAGATTTTTTCATCACTGATGTNTTGCCTATTANGGCTGAGAAAAAAATGTTNGGTGTGTACTTGNGTACTTTGAACTGNGCANTNCTGTATTNTTACCTTATTGCTTCCTTCTTTAGTTTACATGNNATNTACAAGCCATAGGATTATGTTGTNATTTCTCTTGTTATACCACTGACAGGTNCTTGAAATGCGGGCCCTTATCANCAAAGTCGNNCTTTCCATAGTCCTATCCTTGAGTTGATAATGCAGGACATGNTTGACTTGNCAATGTGNGCTACATTAGCTTACACAANTATGTATGNCTGNGGCATGNCTTAAACCTAGNCANCCTGATAAGCATCATGCTNTNNTTATTTCAAATTGAGATTCATTCTGTATAGGATAAGTTCTAGTGAGATGNTCTNTACTTATATTATATGGTACTGGGNATCAAACTGCACGGTGGTCTTGCCAATANTTTACTCATNTAATAGNCATTTTCAGTCTTGAAATACTAAANATAAANTGCTATCTCAGTTCTTATGTAAAAAAGGTATNGGAATGNATTGCATCACTCTATATTACATAAGGGCATCAAATTTCTTGAAATATACCTTTGCTCNTAAATCTGACAGAANATTAAATTGGTTTAGGCCATGGCTTACTTA]
consensusID : consensus_10159#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 785 fasta sequence
[CATGGACTGAGGAGTAGAAATAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCAGCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCA]
[+] EMBL CF319961 [CATGGACTGAGGAGTAGAAATAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCAGCAACCATATGTGGGTGATAGG ]
[-] EMBL CB665366 [ ATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACA GGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCAGCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCA]
consensusID : consensus_10159#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 609 fasta sequence
[AGGAGGCGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGAGGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCGGAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGGAGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGCCATGGTGTACTTAGTTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTACATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCTGTGTCTGGCATGGGCGGGGTGATACCATTTGATAACGAAGCAACGGTGAATGAAATAAGGCTT]
[+] EMBL CB665365 [AGGAGGCGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGAGGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCGGAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGGAGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGCCATGGTGTACTTAGTTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTACATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCTGTGTCTGGCATGGGCGGGGTGATACCATTTGATAACGAAGCAACGGTGAATGAAATAAGGCTT]
consensusID : consensus_10159#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence
[TNNCGGTCCCATTCCATGATGCTACCAGAGCAGTAGGATNAATGATCAGTTGCCAGTTGTATTGGCATATGACCCTTGGGGCACAGAATTCGAATTGAATATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCCGGNCAAGAATAATAATCTGCTACGTGCACATTGACAGNCCTTTTGTTTATCAAGCCTGAAAATTTTGTATTGGCGCTGCAGCAACCATATGTGGGTGATAGGTGCCAAGGCAACTGGGTTGTTGTNAACTTAGGTGATAGTTCTCATCGTGNATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAACTTCCAACNTTCAGGGACAAATTGACATGAATCAAATGAAATGTCATCAACTGTTGTTAGGTCCTTCTCATGAATGGAAAAAAAAAA]
[+] EMBL BI807338 [TNNCGGTCCCATTCCATGATGCTACCAGAGCAGTAGGATNAATGATCAGTTGCCAGTTGTATTGGCATATGACCCTTGGGGCACAGAATTCGAATTGAATATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCCGGNCAAGAATAATAATCTGCTACGTGCACATTGACAGNCCTTTTGTTTATCAAGCCTGAAAATTTTGTATTGGCGCTGCAGCAACCATATGTGGGTGATAGGTGCCAAGGCAACTGGGTTGTTGTNAACTTAGGTGATAGTTCTCATCGTGNATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAACTTCCAACNTTCAGGGACAAATTGACATGAATCAAATGAAATGTCATCAACTGTTGTTAGGTCCTTCTCATGAATGGAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10159#0 GAGAGAGAAAGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAATGGCCGCGGCGGCGCGGG 60
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 AGGAGGAGGAGGCGTCGACGGCGGCGAGGAGCCGGCAGGAGAGCGAGGGGGAGGAGGAGG 120
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 AGGTGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGA 180
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 GGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCG 240
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 GAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGG 300
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 AGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACA 360
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 TGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGTAAGGATAACACTCT-CACCATCA 419
consensus_10159#1 ------------------------------GGGAGGNNAGGATAACACTCTACACCATCA 30
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ----------------------------------------------CATGGACTGAGGAG 14
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 TATGTCCATATTCGTCCATTTCTACCTGTACTTTTTCTTTGAAAAGATTCTGGTCAAAAA 479
consensus_10159#1 TATGTCCATATTCGACCATTTCTACCTGNNCTNTTNCTTTGAAAAGATTCTGGTCAAAAA 90
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 TAGAAATAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACT 74
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 CTGCTCTCGAGGTAAACATGTAAAACCACCTGAGGTTACTTGCTATTGCTATTGATAGGA 539
consensus_10159#1 CTGCTCTGGGGGTAAACATGTNAAACCACCTGAGGTTACTTGCTATNGNTATNGATAGGA 150
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 TAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCA 134
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 ACTAGGAAAACCTCCTATTTGGAACATGCTTTGAGTCAATTTTAGAATGTACCATTACCA 599
consensus_10159#1 ACTAGGNAAACCTNCTATTTGNAACATGCTTTGNGTCAATTNTAGAATGTACCATTACCA 210
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 GTTCAATATCAGGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATC----TCATTT 190
consensus_10159#3 ----------------------AGGAGGC--GATGGCGGTGCTGG-----------ACTT 25
consensus_10159#0 CTGGTGAATATTATTACACCGAATAGATTTTTTCATCACTGATGTATTGCCTATTAGGGC 659
consensus_10159#1 CTGNNGANTATTATTACACCGNATAGATTTTTTCATCACTGATGTNTTGCCTATTANGGC 270
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 GTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATA-AATAATGTCCAGTGC 249
consensus_10159#3 CGACATGCTGTGCGC----CTCGGTGGCGCTGGCGGCGGAGAGG-AGGAAGGATTCG-GC 79
consensus_10159#0 TGAGAAAAAAATGTTTGTTGTGTACTTGTGTATTTTGAACTGTGCATTTCTGTATTTTTA 719
consensus_10159#1 TGAGAAAAAAATGTTNGGTGTGTACTTGNGTACTTTGAACTGNGCANTNCTGTATTNTTA 330
consensus_10159#4 -------------------TNNCGGTCCCATTCCATGATGCTACCAGAGCAGTAGGATNA 41
consensus_10159#2 GGTGTCTGGCATGGGCGGGGTG-ATACCATTT--GTTTAGGAAGCAACGGTGAAGGAAAT 306
consensus_10159#3 CGCGGCGGCGGCGGCCACGGTGGAGGCCGGTG--GTGGAGGAGGCGGAGGAGGAGGAGGA 137
* * * * *
consensus_10159#0 CCTTCTTGCTTCTTTCTTTAGTTTACATGTAATCTACAAGCCATAGGTTTATGTTGTAAT 779
consensus_10159#1 CCTTATTGCTTCCTTCTTTAGTTTACATGNNATNTACAAGCCATAGGATTATGTTGTNAT 390
consensus_10159#4 A-TGATCAGTTGCCAGTTGTATTGGCATATGACCCTTGGGGCACAGAATT-CGAATTGAA 99
consensus_10159#2 AAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATC-TCCTGAGGTGTG 365
consensus_10159#3 GGGG------------TGCAGAGGA-------TGTGGGAAGGGGACG-TGGTGC--TGGA 175
* * * * *
consensus_10159#0 TTCTCTTGTTATACCACTGACAGTTTCTTGAA-ATGCGGGCCCTTATCAGCA-AAGTCGT 837
consensus_10159#1 TTCTCTTGTTATACCACTGACAGGTNCTTGAA-ATGCGGGCCCTTATCANCA-AAGTCGN 448
consensus_10159#4 TATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCCGGNCAAGAATAATA-ATCTGCT 158
consensus_10159#2 TGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCT 425
consensus_10159#3 TTGCTTGGA-GGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCG 234
* * * * *
consensus_10159#0 CCTTTC-CAT----AGTCCTATCCTTGAGTTG---TTAATGCAGGACATGTTTGAC---- 885
consensus_10159#1 NCTTTC-CAT----AGTCCTATCCTTGAGTTG---ATAATGCAGGACATGNTTGAC---- 496
consensus_10159#4 ACGTGCACAT----TGACA-GNCCTTTTGTTT---ATCAAGCCTGAAAATTTTGTA---- 206
consensus_10159#2 ACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAAT 485
consensus_10159#3 GCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGCCATGGTGTAC---- 290
* ** ** * *
consensus_10159#0 --TTGTCAATGTGT--GCTACATTTGCTTACACAATTATGTATGTCTGTGGCATGTCTTA 941
consensus_10159#1 --TTGNCAATGTGN--GCTACATTAGCTTACACAANTATGTATGNCTGNGGCATGNCTTA 552
consensus_10159#4 --TTGGCGCTGCAGCAACCATATGTGGGTG-ATAGGTGCCAAGGCAACTGGGTTGTTGTN 263
consensus_10159#2 TCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGAC-TGTCCGGCAAGAAA-ATA 543
consensus_10159#3 -TTAGTTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCT-TTTCTGTCACAAGGCATA 348
* *
consensus_10159#0 AACCTAGTCAGCCTGATAAGCATCATGCTTTTTTTATTTCAAATTGTGATTCATTCTGTA 1001
consensus_10159#1 AACCTAGNCANCCTGATAAGCATCATGCTNTNNTTATTTCAAATTGAGATTCATTCTGTA 612
consensus_10159#4 AACTTAGG-----TGATAGTTCTCATCGTGNATTTGGTTTTATTTAGTCTCAAGTCGGTA 318
consensus_10159#2 ATCTGTACTGCAATTACAGGGCCTG---TTTGTTGTATCAAGCCTGAAAATTTGTATTGG 600
consensus_10159#3 ATATATATTTGTAT-ATGGGACTTA-GCTCTGTTCTCTTGA---TAGCAATCTATACTGG 403
* * * * * * * *
consensus_10159#0 TAGGATAAGTTCTAGTGAGATGTTCTTTACTTATATTATATGGTACTGTGAATCAGACTG 1061
consensus_10159#1 TAGGATAAGTTCTAGTGAGATGNTCTNTACTTATATTATATGGTACTGGGNATCAAACTG 672
consensus_10159#4 T---CTATATTATATCATGATGCTCAAGGCTTATG----ATGAATCCAAGTGTAAATTTT 371
consensus_10159#2 CGCTGGCAGCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTA 660
consensus_10159#3 T--TACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTA 461
* * * *
consensus_10159#0 CACGTTGGACTTGCCAATAT--TTTACTCATTTAATAGCCATTT-CAGTC--TTGAAATA 1116
consensus_10159#1 CACGGTGGTCTTGCCAATAN--TTTACTCATNTAATAGNCATTTTCAGTC--TTGAAATA 728
consensus_10159#4 TCTGGCTGTTACAT-AGTGT--TTCAA-CTTCCAACNTTCAGGGACAAA---TTGACATG 424
consensus_10159#2 GGTGATAGTTCTCATCGTGT-ATTTGGTTTTATTTAGTCTCAAGTCGGTATCT----ATA 715
consensus_10159#3 CATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACG 521
* * * ** * * *
consensus_10159#0 CTAAATATAAATTGCTATCT-CAGTTCTTATGTAAAAAATGTTATTGGAATTTATTGCAT 1175
consensus_10159#1 CTAAANATAAANTGCTATCT-CAGTTCTTATGTAAAAAA-GGTATNGGAATGNATTGCAT 786
consensus_10159#4 AATCAAATGAAATGTCATCAACTGTTGTTAGGTCCTTCTCATGAATGGAAAAAAAAAA-- 482
consensus_10159#2 TTATATC----ATGATGCTCAAGGCT--TATGATGAATCCA-AGTGTAAATTTTTCTGGC 768
consensus_10159#3 TTGGAGAT-AAATAATGTCCAGTGCTG-TGTCTGGCATGGGCGGGGTGATACCATTTGAT 579
* * * * * *
consensus_10159#0 CACTCTATATTACATATGTGCATCAATTTTCTTGAAATTATCCTTTGTTCATAAATCTGA 1235
consensus_10159#1 CACTCTATATTACATAAGGGCATCAAATTTCTTGAAATATACCTTTGCTCNTAAATCTGA 846
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 TGTTACATAGTGTTTCA------------------------------------------- 785
consensus_10159#3 AACGAAGCAACGGTGAATGAAATAAGGCTT------------------------------ 609
consensus_10159#0 CAGAAGATTAAAATTGTTTCAGGCCATGGTTTACTTAATTTCTTTAGTGGCTATTCTGGT 1295
consensus_10159#1 CAGAANATTAAA-TTGGTTTAGGCCATGGCTTACTTA----------------------- 882
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 TAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTC 1355
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 TGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAA 1415
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 TATCAGGGTACGTATTTCTTGGCATTACCATTTTTCATTTAAAGCATTGAAACAGGTTGT 1475
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 TATTGTGCAGCCTAGTATTAGTGCTTAACTGCTTAATGCAGTTGGTTGTCTCTTCTTTTC 1535
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 ATTTGCATCACACAGTATGGCTATGAATGCTTAACTCAAACAAATGAAAACTAAATCCTG 1595
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 CTGGTCTTGATAGTTTGGACTTTGGATACCTGCCATAGTTATGTTGTCAACATACGGGTA 1655
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 GATATAAATATGAGCACTTCAATTTAGGAATTGCCAAGCACAAAGTTTGGAGAAAATCCA 1715
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 GCCATCTCATTGACTGTCTTTTTTTGTGATTAAGCTGATTGTGCACCTTCGTTTCTTTTC 1775
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 CTTGACTTTTTTTTCCTGATACAGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCAT 1835
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 CTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTC 1895
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 CAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGA 1955
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 AATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTG 2015
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 TGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGAT 2075
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 CTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAA 2135
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 ATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATA 2195
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 ATCTGTACTGCAATTACAGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCT 2255
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 GGCAGCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTG 2315
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 ATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCAT 2375
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 GATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTC 2435
consensus_10159#1 ------------------------------------------------------------
consensus_10159#4 ------------------------------------------------------------
consensus_10159#2 ------------------------------------------------------------
consensus_10159#3 ------------------------------------------------------------
consensus_10159#0 AACTTCCAACTTTCAGGGACAAATTGACATGAATCAAATGA 2476
consensus_10159#1 -----------------------------------------
consensus_10159#4 -----------------------------------------
consensus_10159#2 -----------------------------------------
consensus_10159#3 -----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||