cluster # 10160

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Oryza sativa
cluster # 10160 cluster # 10160 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10160#0 length = 2415 sequences # 5

consensus_10160#1 length = 811 sequences # 1
consensus_10160#2 length = 763 sequences # 1

consensusID : consensus_10160#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2415
fasta sequence

                              [CCGCGGCGCCATCTTCCTCTCTCCTCCGCCCTACGCGTCGCCCCGCCTCGCCTGGCCTTCCCCGCGCATCCTGCACGGGGCCCTAGGAGGCTAGGAGAGGAAGAAGAACACGCGCGCGGGGGGATAGTGGATAGCCGAAGCAACTCGATCGATCTGTGGCCGCGATCGTAGCTCTCTTCTTGGTCCGATCTCGTCTCTCCCGGCATGGATTTCAGGAAGGTGCTCGACCAGACCGTCCGGGAGATAAGGAGGGAGGTAAATCTTAAGGTGCTCAAGGTGCCGGAAATCGAGCAGAAGGTTCTTGATGCCACCAGCGACGAGCCGTGGGGGCCGCATGGTTCCGATTTGGCAGATATCGCCAGGGCCACCAAGAGCTACGGTGATAGCGAAATTATAATGAATGTGTTATGGCAACGCCTGGGGAACACACTTGCGAATTGGCGTCACGTGTATAAGGCGTTGGCTGTGATCGAGTACCTTCTAGCTAATGGCACCGAACGTGCAGCTGATGGCATTGTTGACAATAGCTCACGAATTGCAAAACTCACAAGATTTGAGTATTTGGAGCCTAATGGAAAAGATGTTGGGCTCAATGTGCGTAAGAAGGCTGAAGCTGTTCTAGCAATTTTGGATGACAGGGAGAAGCTTCAAGAGGTCAGAGAGAAGGCTGCCGTTACTAGAGACAAGTATTTTGGCTTATCATCAACTGGAATAACGCACAAATCGAGCGCAGCATCATTTGGCAGTGGCAGCTACTCATCTGGTAGCCACTATGGGAGCACAGGAGGTTCAAGGGAGGTGGGATCATTCAAGGATATACACACAGGCACAGAATGGAAAAAGAACAAGAAGGAAACAGTGTCAAACTACAGCAGCAATAGAGAAGGGTCTAAAGAAATTACTAACAGTGCAACCAGTTATAAGTCAAAAAAGAGTGAAAGGCATGGTAGAAGAAATCAAAATTCCTTAACATTACACTCGAAGTTATCTGCAAATATTAGCACCACATCTGAAGCCCCAAGCTCAAAGAAAGGGGAAAATGAGGATGATGATGATTTCAACCCACGAGGATTTTCTACATCTACTGGAACAGGTACCACAAGATCTAATCACCTGGATCTCTTTGGTCCAAGCTTGATGGATGATCTTGTTGATTCTACTACATCCACTTCAACAGCGACGCCAAATTTTAGCACACCTGCTGTGCCAGAGGTTGATTTATTTGCAGATGCAGCTTTCCAATCAGCCAATGCTCCATTGGAGGCAGCAACGGTTTCTCACACTCAGGACAAAATTGATTTGTTTGCTGGCAGACTGTCTTCTGCTGATTCATTTACTTCAGACACAGAGTTCTCAGTACGCGGTAGTCCTAACAAGTCATCGGAGAAAAAAATGTCTTCCGTTGTGCATCCTTCTACTTCTGCTTTTGATCCCTTCAAACAATCTTTTGCCACCTCATTTCCTTCAGATTCAGAGTTCTCAGTTCATGATCCGACAAGCAAATCTTCTCAAGGAAAAACTCCCACACCAGAACATTCAAGTACAGCAGCTTTTGATCCTTTTGCTGCAATTCCACTGAAGAGTTTTGATGGATCCGAATCTTTTGGAACATTTTCTTCGAACACAGCCTCAAACATTACTGAACTGCCACGGGATTCTTCTGGGGGTCCCAAAAGTTCTGACCATGGTCCTTTGGAGGATGCCAATTTTGATGCCTTCACTTCACACTTGGGATCTTCCACAACAAGTGCAACTGAGTCCATGAATAAGCCCATCAAAAAGCTTGGGCAGGACTCGATGTCAGCATCAAAATCAGTTGCAAAGAAAGAAACTTTTCAGGTCAAATCTGGCATATGGGCTGACTCTTTGAGCCGAGGATTGATTGATTTGAATATAACTTCGTCAC-AAAAGAAGGTCGATCTCTCCGATGTTGGGATTGTCGGACCG-CTG-AGCGGCGGATCTGAGGATAAAG-GCCCG--------GGGGCGACGATGGGCACAGCACCAGGCCTTGTCAGTTCTAGTTTTCCATCTAAAACAGAAACATCCAGTGGAAGCGGTCATTTTCAGCACCAACAGTTTGGAAGCTTTAAGTGATTTTTATCCAGGATATGTCTTTTGTTCTATGGTTCTTGCAGAGTACTTCTTGGAGCATTCGTACAGCTCCATGCCTATAAGAGTAAACGTGTATATAGCTACCAAACTCTGTGCGATGATCAGGAGACGTGTTGCCAACTAACCAGCATCTTCTCTGCCCTTGAGGCATTAATATTTTTTTACTTATGGCGAAATGGATATGTTTTGTGTACATGAGTAAAGAACCAATGCCATGGTAGCAATTGTAAAAAGGGTTCATCAATTATGTGTGATACACGCTCATATGAATTTTGAAAAATGAATAACGCAAAGCATTCTGGATGC]

[+] EMBL AK073479             [CCGCGGCGCCATCTTCCTCTCTCCTCCGCCCTACGCGTCGCCCCGCCTCGCCTGGCCTTCCCCGCGCATCCTGCACGGGGCCCTAGGAGGCTAGGAGAGGAAGAAGAACACGCGCGCGGGGGGATAGTGGATAGCCGAAGCAACTCGATCGATCTGTGGCCGCGATCGTAGCTCTCTTCTTGGTCCGATCTCGTCTCTCCCGGCATGGATTTCAGGAAGGTGCTCGACCAGACCGTCCGGGAGATAAGGAGGGAGGTAAATCTTAAGGTGCTCAAGGTGCCGGAAATCGAGCAGAAGGTTCTTGATGCCACCAGCGACGAGCCGTGGGGGCCGCATGGTTCCGATTTGGCAGATATCGCCAGGGCCACCAAGAGCTACGGTGATAGCGAAATTATAATGAATGTGTTATGGCAACGCCTGGGGAACACACTTGCGAATTGGCGTCACGTGTATAAGGCGTTGGCTGTGATCGAGTACCTTCTAGCTAATGGCACCGAACGTGCAGCTGATGGCATTGTTGACAATAGCTCACGAATTGCAAAACTCACAAGATTTGAGTATTTGGAGCCTAATGGAAAAGATGTTGGGCTCAATGTGCGTAAGAAGGCTGAAGCTGTTCTAGCAATTTTGGATGACAGGGAGAAGCTTCAAGAGGTCAGAGAGAAGGCTGCCGTTACTAGAGACAAGTATTTTGGCTTATCATCAACTGGAATAACGCACAAATCGAGCGCAGCATCATTTGGCAGTGGCAGCTACTCATCTGGTAGCCACTATGGGAGCACAGGAGGTTCAAGGGAGGTGGGATCATTCAAGGATATACACACAGGCACAGAATGGAAAAAGAACAAGAAGGAAACAGTGTCAAACTACAGCAGCAATAGAGAAGGGTCTAAAGAAATTACTAACAGTGCAACCAGTTATAAGTCAAAAAAGAGTGAAAGGCATGGTAGAAGAAATCAAAATTCCTTAACATTACACTCGAAGTTATCTGCAAATATTAGCACCACATCTGAAGCCCCAAGCTCAAAGAAAGGGGAAAATGAGGATGATGATGATTTCAACCCACGAGGATTTTCTACATCTACTGGAACAGGTACCACAAGATCTAATCACCTGGATCTCTTTGGTCCAAGCTTGATGGATGATCTTGTTGATTCTACTACATCCACTTCAACAGCGACGCCAAATTTTAGCACACCTGCTGTGCCAGAGGTTGATTTATTTGCAGATGCAGCTTTCCAATCAGCCAATGCTCCATTGGAGGCAGCAACGGTTTCTCACACTCAGGACAAAATTGATTTGTTTGCTGGCAGACTGTCTTCTGCTGATTCATTTACTTCAGACACAGAGTTCTCAGTACGCGGTAGTCCTAACAAGTCATCGGAGAAAAAAATGTCTTCCGTTGTGCATCCTTCTACTTCTGCTTTTGATCCCTTCAAACAATCTTTTGCCACCTCATTTCCTTCAGATTCAGAGTTCTCAGTTCATGATCCGACAAGCAAATCTTCTCAAGGAAAAACTCCCACACCAGAACATTCAAGTACAGCAGCTTTTGATCCTTTTGCTGCAATTCCACTGAAGAGTTTTGATGGATCCGAATCTTTTGGAACATTTTCTTCGAACACAGCCTCAAACATTACTGAACTGCCACGGGATTCTTCTGGGGGTCCCAAAAGTTCTGACCATGGTCCTTTGGAGGATGCCAATTTTGATGCCTTCACTTCACACTTGGGATCTTCCACAACAAGTGCAACTGAGTCCATGAATAAGCCCATCAAAAAGCTTGGGCAGGACTCGATGTCAGCATCAAAATCAGTTGCAAAGAAAGAAACTTTTCAGGTCAAATCTGGCATATGGGCTGACTCTTTGAGCCGAGGATTGATTGATTTGAATATAACTTCGTCAC AAAAGAAGGTCGATCTCTCCGATGTTGGGATTGTCGGACCG CTG AGCGGCGGATCTGAGGATAAAG GCCCG        GGGGCGACGATGGGCACAGCACCAGGCCTTGTCAGTTCTAGTTTTCCATCTAAAACGGAAACATCCAGTGGAAGCGGTCATTTTCAGCACCAACAGTTTGGAAGCTTTAAGTGATTTTTATCCAGGATATGTCTTTTGTTCTATGGTTCTTGCAGAGTACTTCTTGGAGCATTCGTACAGCTCCATGCCTATAAGAGTAAACGTGTATATAGCTACCAAACTCTGTGCGATGATCAGGAGACGTGTTGCCAACTAACCAGCATCTTCTCTGCCCTTGAGGCATTAATATTTTTTTACTTATGGCGAAATGGATATGTTTTGTGTACATGAGTAAAGAACCAATGCCATGGTAGCAATTGTAAAAAGGGTTCATCAATTATGTGTGATACACGCTCATATGAATTTTGAAAAATGAATAACGCAAAGCATTCTGGATGC]
[+] EMBL AK120616             [  GCGGCGCCATCTTCCTCTCTCCTCCGCCCTACGCGTCGCCCCGCCTCGCCTGGCCTTCCCCGCGCATCCTGCACGGAGCCCTAGGAGGCTAGGAGAGGAAGAAGAACACGCGCGCGGGGGGATAGTGGATAGCCGAAGCAACTCGATCGATCTGTGGCCGCGATCGTAGCTCTCTTCTTGGTCCGATCTCGTCTCTCCCGGCATGGATTTCAGGAAGGTGCTCGACCAGACCGTCCGGGAGATAAGGAGGGAGGTAAATCTTAAGGTGCTCAAGGTGCCGGAAATCGAGCAGAAGGTTCTTGATGCCACCAGCGACGAGCCGTGGGGGCCGCATGGTTCCGATTTGGCAGATATCGCCAGGGCCACCAAGAGCTACGGTGATAGCGAAATTATAATGAATGTGTTATGGCAACGCCTGGGGAACACACTTGCGAATTGGCGTCACGTGTATAAGGCGTTGGCTGTGATCGAGTACCCTCTAGCTAATGGCACCGAACGTGCAGCTGATGGCATTGTTGACAATAGCTCACGAATTGCAAAACTCACAAGATTTGAGTATTTGGAGCCTAATGGAAAAGATGTTGGGCTCAATGTGCGTAAGAAGGCTGAAGCTGTTCTAGCAATTTTGGATGACAGGGAGAAGCTTCAAGAGGTCAGAGAGAAGGCTGCCGTTACTAGAGACAAGTATTTTGGCTTATCATCAACTGGAATAACGCACAAATCGAGCGCAGCATCATTTGGCAGTGGCAGCTACTCATCTGGTAGCCACTATGGGAGCACAGGAGGTTCAAGGGAGGTGGGATCATTCAAGGATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA999147             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATTCCTTAACATTACACTCGAAGTTATCTGCAAATATTAGCACCACATCTGAAGCCCCAAGCTCAAAGAAAGGGGAAAATGAGGATGATGATGATTTCAACCCACGAGGATTTTCTACATCTACTGGAACAGGTACCACAAGATCTAATCACCTGGATCTCTTTGGTCCAAGCTTGATGGATGATCTTGTTGATTCTACTACATCCACTTCAACAGCAACGCCCAATGTTAGCACACCTGCTGTGCCAGAGGTTGATTTATTTGCAGATGCCGCTTTCCAATCAGCCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB670834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGTACAGCAGCTTTTGATCCTTTTGCTGCAATTCCACTGAAGAGTTTTGATGGATCCGAATCTTTTGGAACATTTTCTTCGAACACAGCCTCAAACATTACTGAACTGCCACGGGATTCTTCTGGGGGTCCCAAAAGTTCTGACCATGGTCCTTTGGAGGATGCCAATTTTGATGCCTTCACTTCACACTTGGGATCTTCCACAACAAGTGCAACTGAGTCCATGAATAAGCCCATCAAAAAGCTTGGGCAGGACTCGATGTCAGCATCAAAATCAGTTGCAAAGAAAGAAACTTTTCAGGTCAAATTTGGCATATGGGCTGACTCTTTGAGCCGAGGATTGATTGATTTGAATATAACTTCGTCAC AAAAGAAGGTCGATCTCTCCGATGTTGGGATTGTCGGACCG CTG AGCGGCGGATTTGAGGATAAAG GCCCG        GGGGCGACGATGGGCACAGCACCAGGCCTTGTCAGTTTTAGTTTTCCATCTAAAACAGAAACATCCAGTGGAAGCGGTCATTTTCAGCACCAACAGTTTGGAAGCTTTAAGTGATTTTTATCCAGGATATGTCTTTTGTTCTATGGTTCTTGCAGAGTACTTTTTGGAGCATTCGTACAGCTCCATGCCTATAAGAGTAAACGTGTATATAGCTACCAAACTCTGTGCGATGATCAGGAGACGTGTTGCCAACTAACCAGCATTTTTTTTGCCCTTGAGGCATTAATATTTTTTTA                                                                                                                                              ]
[+] EMBL BI800603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTC GC TC AAATCAGTGCCAAAGAAAGAAACTTGTCAGGTCAAATCTGGCATAT GGCTGACTCTTTGAGCCGAGGATTGATTGATTTGAATATAACTTCGTCACAAAAAGAA GTCGATCTCTCCGATGTTGGGATTGTCGGACCGCCTGTAGC GCGGATCTGAGGATAAAGCGCCCGTGGTACATGGGGCGACGATGGGCACAGCACCAGGCCTTGTCAGTTCTAGTTTTCCATCTAAACAAGAAACATCCAGTGGAAGCGGTCATTTTCAGCACCAACAGTTTGGAAGCTTTAAGTGATTTTTATCCAGGATATGTCTTTTGTTCTATGGTTCTTGCAGAGTACTTCTTGGAGCATTCGTACAGCTCCATGCCTATAAGAGTAAACGTGTATATAGCTACC AACTCTGTGCGATGATCAGGAGACGTGTT CCAACTAACCAGCATCTTCTCTTCCCTTGA GCATTAATATTTTTTTACTTAGGGCGAAATGGAaaaa                                                                                                                          ]




>consensus_10160#0
CCGCGGCGCCATCTTCCTCTCTCCTCCGCCCTACGCGTCGCCCCGCCTCGCCTGGCCTTC
CCCGCGCATCCTGCACGGGGCCCTAGGAGGCTAGGAGAGGAAGAAGAACACGCGCGCGGG
GGGATAGTGGATAGCCGAAGCAACTCGATCGATCTGTGGCCGCGATCGTAGCTCTCTTCT
TGGTCCGATCTCGTCTCTCCCGGCATGGATTTCAGGAAGGTGCTCGACCAGACCGTCCGG
GAGATAAGGAGGGAGGTAAATCTTAAGGTGCTCAAGGTGCCGGAAATCGAGCAGAAGGTT
CTTGATGCCACCAGCGACGAGCCGTGGGGGCCGCATGGTTCCGATTTGGCAGATATCGCC
AGGGCCACCAAGAGCTACGGTGATAGCGAAATTATAATGAATGTGTTATGGCAACGCCTG
GGGAACACACTTGCGAATTGGCGTCACGTGTATAAGGCGTTGGCTGTGATCGAGTACCTT
CTAGCTAATGGCACCGAACGTGCAGCTGATGGCATTGTTGACAATAGCTCACGAATTGCA
AAACTCACAAGATTTGAGTATTTGGAGCCTAATGGAAAAGATGTTGGGCTCAATGTGCGT
AAGAAGGCTGAAGCTGTTCTAGCAATTTTGGATGACAGGGAGAAGCTTCAAGAGGTCAGA
GAGAAGGCTGCCGTTACTAGAGACAAGTATTTTGGCTTATCATCAACTGGAATAACGCAC
AAATCGAGCGCAGCATCATTTGGCAGTGGCAGCTACTCATCTGGTAGCCACTATGGGAGC
ACAGGAGGTTCAAGGGAGGTGGGATCATTCAAGGATATACACACAGGCACAGAATGGAAA
AAGAACAAGAAGGAAACAGTGTCAAACTACAGCAGCAATAGAGAAGGGTCTAAAGAAATT
ACTAACAGTGCAACCAGTTATAAGTCAAAAAAGAGTGAAAGGCATGGTAGAAGAAATCAA
AATTCCTTAACATTACACTCGAAGTTATCTGCAAATATTAGCACCACATCTGAAGCCCCA
AGCTCAAAGAAAGGGGAAAATGAGGATGATGATGATTTCAACCCACGAGGATTTTCTACA
TCTACTGGAACAGGTACCACAAGATCTAATCACCTGGATCTCTTTGGTCCAAGCTTGATG
GATGATCTTGTTGATTCTACTACATCCACTTCAACAGCGACGCCAAATTTTAGCACACCT
GCTGTGCCAGAGGTTGATTTATTTGCAGATGCAGCTTTCCAATCAGCCAATGCTCCATTG
GAGGCAGCAACGGTTTCTCACACTCAGGACAAAATTGATTTGTTTGCTGGCAGACTGTCT
TCTGCTGATTCATTTACTTCAGACACAGAGTTCTCAGTACGCGGTAGTCCTAACAAGTCA
TCGGAGAAAAAAATGTCTTCCGTTGTGCATCCTTCTACTTCTGCTTTTGATCCCTTCAAA
CAATCTTTTGCCACCTCATTTCCTTCAGATTCAGAGTTCTCAGTTCATGATCCGACAAGC
AAATCTTCTCAAGGAAAAACTCCCACACCAGAACATTCAAGTACAGCAGCTTTTGATCCT
TTTGCTGCAATTCCACTGAAGAGTTTTGATGGATCCGAATCTTTTGGAACATTTTCTTCG
AACACAGCCTCAAACATTACTGAACTGCCACGGGATTCTTCTGGGGGTCCCAAAAGTTCT
GACCATGGTCCTTTGGAGGATGCCAATTTTGATGCCTTCACTTCACACTTGGGATCTTCC
ACAACAAGTGCAACTGAGTCCATGAATAAGCCCATCAAAAAGCTTGGGCAGGACTCGATG
TCAGCATCAAAATCAGTTGCAAAGAAAGAAACTTTTCAGGTCAAATCTGGCATATGGGCT
GACTCTTTGAGCCGAGGATTGATTGATTTGAATATAACTTCGTCACAAAAGAAGGTCGAT
CTCTCCGATGTTGGGATTGTCGGACCGCTGAGCGGCGGATCTGAGGATAAAGGCCCGGGG
GCGACGATGGGCACAGCACCAGGCCTTGTCAGTTCTAGTTTTCCATCTAAAACAGAAACA
TCCAGTGGAAGCGGTCATTTTCAGCACCAACAGTTTGGAAGCTTTAAGTGATTTTTATCC
AGGATATGTCTTTTGTTCTATGGTTCTTGCAGAGTACTTCTTGGAGCATTCGTACAGCTC
CATGCCTATAAGAGTAAACGTGTATATAGCTACCAAACTCTGTGCGATGATCAGGAGACG
TGTTGCCAACTAACCAGCATCTTCTCTGCCCTTGAGGCATTAATATTTTTTTACTTATGG
CGAAATGGATATGTTTTGTGTACATGAGTAAAGAACCAATGCCATGGTAGCAATTGTAAA
AAGGGTTCATCAATTATGTGTGATACACGCTCATATGAATTTTGAAAAATGAATAACGCA
AAGCATTCTGGATGC

consensusID : consensus_10160#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 811
fasta sequence

                              [ACAATCTTTTGCCACCTCATTTCCTTCAGATGCAGAGTTCTCAGTTCATGATCCGACAAGCAAATCTTCTCAAGGAAAAACTCCCACACCAGAACATTCAAGTACAGCAGCTTTTGATCCTTTTGCTGCAATTCCACTGAAGAGTTTTGATGGATCCGAATCTTTTGGAACATTTTCTTCGAACACAGCCTCAAACATTACTGAACTGCAACGGGATTCTTCTGGGGGTCCCAAAAGTTCTGACCATGGTCCTTTGGAGGATGCCAATTTTGATGCCTTCACTTCACACTTGGGATCTTCCACAACAAGTGCAACTGAGTCCATGAATAAGCCCATCAAAAAGCTTGGGCAGGACTCGATGTCAGCATCAAAATCAGTTGCAAAGAAAGAAACTTTTCAGGTCAAATCTGGCATATGGGCTGACTCTTTGAGCCGAGGATTGATTGATTTGAATATAACTTCGTCACAAAAGAAGGTCGATCTCTCCGATGTTGGGATTGTCGGACCGCTGAGCGGCGGATCTGAGGATAAAGGCCCGTGGTACATGGGGGCGACGATGGGCACAGCACCAGGCCTTGTCAGTTCTAGTTTTCCATCTAAAACAGAAACATCCAGTGGAAGCGGTCATTTTCAGCACCAACAGTTTGGAAGCTTTAAGTGATTTTTATCCAGGATATGTCTTTTGTTCTATGGTTCTTGCAGAGTACTTCTTGGAGCATTCGTACAGCTCCATGCCTATAAGAGTAAACGTGTATATAGCTACCAAAATGTGTGCGATGATCAGGAGACGTGTTGCCAACTCTATAAAAGA]

[-] EMBL CB618615             [ACAATCTTTTGCCACCTCATTTCCTTCAGATGCAGAGTTCTCAGTTCATGATCCGACAAGCAAATCTTCTCAAGGAAAAACTCCCACACCAGAACATTCAAGTACAGCAGCTTTTGATCCTTTTGCTGCAATTCCACTGAAGAGTTTTGATGGATCCGAATCTTTTGGAACATTTTCTTCGAACACAGCCTCAAACATTACTGAACTGCAACGGGATTCTTCTGGGGGTCCCAAAAGTTCTGACCATGGTCCTTTGGAGGATGCCAATTTTGATGCCTTCACTTCACACTTGGGATCTTCCACAACAAGTGCAACTGAGTCCATGAATAAGCCCATCAAAAAGCTTGGGCAGGACTCGATGTCAGCATCAAAATCAGTTGCAAAGAAAGAAACTTTTCAGGTCAAATCTGGCATATGGGCTGACTCTTTGAGCCGAGGATTGATTGATTTGAATATAACTTCGTCACAAAAGAAGGTCGATCTCTCCGATGTTGGGATTGTCGGACCGCTGAGCGGCGGATCTGAGGATAAAGGCCCGTGGTACATGGGGGCGACGATGGGCACAGCACCAGGCCTTGTCAGTTCTAGTTTTCCATCTAAAACAGAAACATCCAGTGGAAGCGGTCATTTTCAGCACCAACAGTTTGGAAGCTTTAAGTGATTTTTATCCAGGATATGTCTTTTGTTCTATGGTTCTTGCAGAGTACTTCTTGGAGCATTCGTACAGCTCCATGCCTATAAGAGTAAACGTGTATATAGCTACCAAAATGTGTGCGATGATCAGGAGACGTGTTGCCAACTCTATAAAAGA]




>consensus_10160#1
ACAATCTTTTGCCACCTCATTTCCTTCAGATGCAGAGTTCTCAGTTCATGATCCGACAAG
CAAATCTTCTCAAGGAAAAACTCCCACACCAGAACATTCAAGTACAGCAGCTTTTGATCC
TTTTGCTGCAATTCCACTGAAGAGTTTTGATGGATCCGAATCTTTTGGAACATTTTCTTC
GAACACAGCCTCAAACATTACTGAACTGCAACGGGATTCTTCTGGGGGTCCCAAAAGTTC
TGACCATGGTCCTTTGGAGGATGCCAATTTTGATGCCTTCACTTCACACTTGGGATCTTC
CACAACAAGTGCAACTGAGTCCATGAATAAGCCCATCAAAAAGCTTGGGCAGGACTCGAT
GTCAGCATCAAAATCAGTTGCAAAGAAAGAAACTTTTCAGGTCAAATCTGGCATATGGGC
TGACTCTTTGAGCCGAGGATTGATTGATTTGAATATAACTTCGTCACAAAAGAAGGTCGA
TCTCTCCGATGTTGGGATTGTCGGACCGCTGAGCGGCGGATCTGAGGATAAAGGCCCGTG
GTACATGGGGGCGACGATGGGCACAGCACCAGGCCTTGTCAGTTCTAGTTTTCCATCTAA
AACAGAAACATCCAGTGGAAGCGGTCATTTTCAGCACCAACAGTTTGGAAGCTTTAAGTG
ATTTTTATCCAGGATATGTCTTTTGTTCTATGGTTCTTGCAGAGTACTTCTTGGAGCATT
CGTACAGCTCCATGCCTATAAGAGTAAACGTGTATATAGCTACCAAAATGTGTGCGATGA
TCAGGAGACGTGTTGCCAACTCTATAAAAGA

consensusID : consensus_10160#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 763
fasta sequence

                              [TCCTCCCCCCTACGCGTCGCCCCGCCTCGCCTGGCCTTCCCCGCGCATCCTGCACGGAGCCCTAGGAGGCTAGGAGAGGAAGAAGAACACGCGCGCGGGGGGATAGTGGATAGCCGAAGCAACTCGATCGATCTGTGGCCGCGATCGTAGCTCTCTTCTTGGTCCGATCTCGTCTCTCCCGGCATGGATTTCAGGAAGGTGCTCGACCAGACCGTCCGGGAGATAAGGAGGGAGGTAAATCTTAAGGTGCTCAAGGTGCCGGAAATCGAGCAGAAGGTTCTTGATGCCACCAGCGACGAGCCGTGGGGGCCGCATGGTTCCGATTTGGCAGATATCGCCAGGGCCACCAAGAGCTACGGTGATAGCGAAATTATAATGAATGTGTTATGGCAACGCCTGGGGAACACACTTGCGAATTGGCGTCACGTGTATAAGGCGTTGGCTGTGATCGAGTACCTTCTAGCTAATGGCACCGAACGTGCAGCTGATGGCATTGTTGACAATAGCTCACGAATTGCAATTTGAGTATTTGGAGCCTAATGGAAAAGATGTTGGGCTCAATGTGCGTAAGAAGGCTGAAGCTGTTCTAGCAATTTTGGATGACAGGGAGAAGCTTCAAGAGGTCACAGAGAAGGCTGCCGTTACTACAGACAAGTATTTTGGCTTATCATCAACTGGAATAACGCACAAATCGAGCGCAGCATCATTTGGCAGTGGCAGCTACTCATCTGGTAGCCACTATGGGAGCACATGACGGTCAAGG]

[+] EMBL CB670833             [TCCTCCCCCCTACGCGTCGCCCCGCCTCGCCTGGCCTTCCCCGCGCATCCTGCACGGAGCCCTAGGAGGCTAGGAGAGGAAGAAGAACACGCGCGCGGGGGGATAGTGGATAGCCGAAGCAACTCGATCGATCTGTGGCCGCGATCGTAGCTCTCTTCTTGGTCCGATCTCGTCTCTCCCGGCATGGATTTCAGGAAGGTGCTCGACCAGACCGTCCGGGAGATAAGGAGGGAGGTAAATCTTAAGGTGCTCAAGGTGCCGGAAATCGAGCAGAAGGTTCTTGATGCCACCAGCGACGAGCCGTGGGGGCCGCATGGTTCCGATTTGGCAGATATCGCCAGGGCCACCAAGAGCTACGGTGATAGCGAAATTATAATGAATGTGTTATGGCAACGCCTGGGGAACACACTTGCGAATTGGCGTCACGTGTATAAGGCGTTGGCTGTGATCGAGTACCTTCTAGCTAATGGCACCGAACGTGCAGCTGATGGCATTGTTGACAATAGCTCACGAATTGCAATTTGAGTATTTGGAGCCTAATGGAAAAGATGTTGGGCTCAATGTGCGTAAGAAGGCTGAAGCTGTTCTAGCAATTTTGGATGACAGGGAGAAGCTTCAAGAGGTCACAGAGAAGGCTGCCGTTACTACAGACAAGTATTTTGGCTTATCATCAACTGGAATAACGCACAAATCGAGCGCAGCATCATTTGGCAGTGGCAGCTACTCATCTGGTAGCCACTATGGGAGCACATGACGGTCAAGG]




>consensus_10160#2
TCCTCCCCCCTACGCGTCGCCCCGCCTCGCCTGGCCTTCCCCGCGCATCCTGCACGGAGC
CCTAGGAGGCTAGGAGAGGAAGAAGAACACGCGCGCGGGGGGATAGTGGATAGCCGAAGC
AACTCGATCGATCTGTGGCCGCGATCGTAGCTCTCTTCTTGGTCCGATCTCGTCTCTCCC
GGCATGGATTTCAGGAAGGTGCTCGACCAGACCGTCCGGGAGATAAGGAGGGAGGTAAAT
CTTAAGGTGCTCAAGGTGCCGGAAATCGAGCAGAAGGTTCTTGATGCCACCAGCGACGAG
CCGTGGGGGCCGCATGGTTCCGATTTGGCAGATATCGCCAGGGCCACCAAGAGCTACGGT
GATAGCGAAATTATAATGAATGTGTTATGGCAACGCCTGGGGAACACACTTGCGAATTGG
CGTCACGTGTATAAGGCGTTGGCTGTGATCGAGTACCTTCTAGCTAATGGCACCGAACGT
GCAGCTGATGGCATTGTTGACAATAGCTCACGAATTGCAATTTGAGTATTTGGAGCCTAA
TGGAAAAGATGTTGGGCTCAATGTGCGTAAGAAGGCTGAAGCTGTTCTAGCAATTTTGGA
TGACAGGGAGAAGCTTCAAGAGGTCACAGAGAAGGCTGCCGTTACTACAGACAAGTATTT
TGGCTTATCATCAACTGGAATAACGCACAAATCGAGCGCAGCATCATTTGGCAGTGGCAG
CTACTCATCTGGTAGCCACTATGGGAGCACATGACGGTCAAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10160#0      CCGCGGCGCCATCTTCCTCTCTCCTCCGCCCTACGCGTCGCCCCGCCTCGCCTGGCCTTC 60
consensus_10160#2      ---------------------TCCTCCCCCCTACGCGTCGCCCCGCCTCGCCTGGCCTTC 39
consensus_10160#1      ------------------ACAATCTTTTGCCACCTCATTTCCTTCAGATGCAGAGTTCTC 42
                                              **    **  * * *  **       **   *   **

consensus_10160#0      CCCGCGC-ATCCTGCACG-GGGCCCTAGGAGGCTAGGAGAGGAAGA--AGAACACGCGCG 116
consensus_10160#2      CCCGCGC-ATCCTGCACG-GAGCCCTAGGAGGCTAGGAGAGGAAGA--AGAACACGCGCG 95
consensus_10160#1      AGTTCATGATCCGACAAGCAAATCTTCTCAAGGAAAAACTCCCACACCAGAACATTCAAG 102
                           *   ****  ** *     * *   * *  *  *     * *  ******  *  *

consensus_10160#0      CGGGGGGATAGTGGATAGCC--GAAGCAACTCGATCGATCTGTGGCCGCGATCGTAGCTC 174
consensus_10160#2      CGGGGGGATAGTGGATAGCC--GAAGCAACTCGATCGATCTGTGGCCGCGATCGTAGCTC 153
consensus_10160#1      TACAGCAGCTTTTGATCCTTTTGCTGCAATTCCACTGA---AGAGTTTTGATGGATCCGA 159
                           *      * ***      *  **** ** *  **      *    *** *   *  

consensus_10160#0      TCTTCTTGGTCCGATCTCGTCTCTCCCGGCAT-GGATTTCAGGAAGGTGCTCGACCAGAC 233
consensus_10160#2      TCTTCTTGGTCCGATCTCGTCTCTCCCGGCAT-GGATTTCAGGAAGGTGCTCGACCAGAC 212
consensus_10160#1      ATCTTTTGGAACATTTTCTTCGAACACAGCCTCAAACATTACTGAACTGC--AACGGGAT 217
                          * ****  *  * ** **   * * ** *   *  * *   *  ***   **  ** 

consensus_10160#0      CGTCCGGGAGATAAGGAGGGAGGTAAATCTTAAGGTGCTCAAGGTGCCGGAAATCGAGCA 293
consensus_10160#2      CGTCCGGGAGATAAGGAGGGAGGTAAATCTTAAGGTGCTCAAGGTGCCGGAAATCGAGCA 272
consensus_10160#1      TCTTCTGGGGGTCCCAAAAGTTCTGACCATGGTCCTTTGGAGGATGCCAATTTTGATGCC 277
                         * * ** * *    *  *   * *   *     *    * * ****     *   ** 

consensus_10160#0      GAAGGTTC----TTGATGCCACCAGCGACGAGCCGTGGGGGCCGCATGGTT---CCGATT 346
consensus_10160#2      GAAGGTTC----TTGATGCCACCAGCGACGAGCCGTGGGGGCCGCATGGTT---CCGATT 325
consensus_10160#1      TTCACTTCACACTTGGGATCTTCCACAACAAGTGCAACTGAGTCCATGAATAAGCCCATC 337
                            ***    ***    *  *  * ** **       *    ****  *   ** ** 

consensus_10160#0      TGGCAGATATCGCCAGGGCCACCAAGAGCTACGGTGATAGCGAAATTATAATGAATGTGT 406
consensus_10160#2      TGGCAGATATCGCCAGGGCCACCAAGAGCTACGGTGATAGCGAAATTATAATGAATGTGT 385
consensus_10160#1      AAAAAGCTTGGGCAGGACTCGATGTCAGCATCAAAATCAGTTGCAAAGAAAGAAACTTTT 397
                           ** *   **  *   *      ***  *      **    *    **  **  * *

consensus_10160#0      TATGGCAACGCCTGGGGAACACACTTGCGAATTGGCGTCACGTGTATAAGGCGTTGGCTG 466
consensus_10160#2      TATGGCAACGCCTGGGGAACACACTTGCGAATTGGCGTCACGTGTATAAGGCGTTGGCTG 445
consensus_10160#1      CAGGTCAA-ATCTGGCATATGGGCTGACTCTTTGA-GCCGAGGATTGATTGATTTGAATA 455
                        * * ***   ****   *    **  *   ***  * *  *  *  *  *  ***  * 

consensus_10160#0      TGATCGAGTACCTTCTAGCTAATGGCACCGAACGTGCAGCTGATGGCATTGTTGA--CAA 524
consensus_10160#2      TGATCGAGTACCTTCTAGCTAATGGCACCGAACGTGCAGCTGATGGCATTGTTGA--CAA 503
consensus_10160#1      TAACTTCGT------CACAAAAGAAGGTCGATCTCTCCGATGTTGGGATTGTCGGACCGC 509
                       * *    **       *   **      *** *   * * ** *** ***** *   *  

consensus_10160#0      TAGCTCACGAATTGCAAAACTCACAAGATTTGAGTATTTGGAGCCTAATGGAAAAGATGT 584
consensus_10160#2      TAGCTCACGAATTGCAA-----------TTTGAGTATTTGGAGCCTAATGGAAAAGATGT 552
consensus_10160#1      TGAGCGGCGGATCTGAGGATAAAGGCCCGTGGTACATGGGGGCGACGATGGGCACAGCAC 569
                       *      ** **   *             * *   **  **      ****  *      

consensus_10160#0      TGGGCTCAATGTGCGTAAGAAGGCTGAAGCTGTTCTAGCAATTTTGGATGACAGGGAGAA 644
consensus_10160#2      TGGGCTCAATGTGCGTAAGAAGGCTGAAGCTGTTCTAGCAATTTTGGATGACAGGGAGAA 612
consensus_10160#1      CAGGCCT--TGTCAGTTCTAGTTTTCCATCTAAAACAGAAACATCCAGTGGAAGCGGTCA 627
                         ***    ***  **   *    *  * **     ** **  *    **  ** *   *

consensus_10160#0      GCTTCAAGA-----GGTCAGAGAGA---AGGCTGCCGTTACTAGAGACAAGTATTTTGGC 696
consensus_10160#2      GCTTCAAGA-----GGTCACAGAGA---AGGCTGCCGTTACTACAGACAAGTATTTTGGC 664
consensus_10160#1      TTTTCAGCACCAACAGTTTGGAAGCTTTAAGTGATTTTTATCCAGGATATGTCTTTTGTT 687
                         ****  *      **     **    * *      ***     ** * ** *****  

consensus_10160#0      TTATCATCAAC-TGGAATAACGCACAAATCGAGCGCAGCATCATTTGGCAGTGGCAGCTA 755
consensus_10160#2      TTATCATCAAC-TGGAATAACGCACAAATCGAGCGCAGCATCATTTGGCAGTGGCAGCTA 723
consensus_10160#1      CTATGGTTCTTGCAGAGTACTTCTTGGAGCATTCGTACAGCTCCATGCCTATAAGAGTAA 747
                        ***  *       ** **   *    * *   ** *        ** *  *   **  *

consensus_10160#0      CTCATCTGGTAGCCACTATGGGAGCACAGGAGGTTCAAGGGAGGTGGGATCATTCAAGGA 815
consensus_10160#2      CTCATCTGGTAGCCACTATGGGAGCACATGACGGTCAAGG-------------------- 763
consensus_10160#1      ACGTGTATATAGCTACCA-AAATGTGTGCGATGATCAGGAGACGTGTTGCCAACTCTATA 806
                                **** ** *     *     ** * *** *                     

consensus_10160#0      TATACACACAGGCACAGAATGGAAAAAGAACAAGAAGGAAACAGTGTCAAACTACAGCAG 875
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      AAAGA------------------------------------------------------- 811
                                                                                   

consensus_10160#0      CAATAGAGAAGGGTCTAAAGAAATTACTAACAGTGCAACCAGTTATAAGTCAAAAAAGAG 935
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TGAAAGGCATGGTAGAAGAAATCAAAATTCCTTAACATTACACTCGAAGTTATCTGCAAA 995
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TATTAGCACCACATCTGAAGCCCCAAGCTCAAAGAAAGGGGAAAATGAGGATGATGATGA 1055
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TTTCAACCCACGAGGATTTTCTACATCTACTGGAACAGGTACCACAAGATCTAATCACCT 1115
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      GGATCTCTTTGGTCCAAGCTTGATGGATGATCTTGTTGATTCTACTACATCCACTTCAAC 1175
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      AGCGACGCCAAATTTTAGCACACCTGCTGTGCCAGAGGTTGATTTATTTGCAGATGCAGC 1235
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TTTCCAATCAGCCAATGCTCCATTGGAGGCAGCAACGGTTTCTCACACTCAGGACAAAAT 1295
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TGATTTGTTTGCTGGCAGACTGTCTTCTGCTGATTCATTTACTTCAGACACAGAGTTCTC 1355
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      AGTACGCGGTAGTCCTAACAAGTCATCGGAGAAAAAAATGTCTTCCGTTGTGCATCCTTC 1415
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TACTTCTGCTTTTGATCCCTTCAAACAATCTTTTGCCACCTCATTTCCTTCAGATTCAGA 1475
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      GTTCTCAGTTCATGATCCGACAAGCAAATCTTCTCAAGGAAAAACTCCCACACCAGAACA 1535
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TTCAAGTACAGCAGCTTTTGATCCTTTTGCTGCAATTCCACTGAAGAGTTTTGATGGATC 1595
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      CGAATCTTTTGGAACATTTTCTTCGAACACAGCCTCAAACATTACTGAACTGCCACGGGA 1655
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TTCTTCTGGGGGTCCCAAAAGTTCTGACCATGGTCCTTTGGAGGATGCCAATTTTGATGC 1715
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      CTTCACTTCACACTTGGGATCTTCCACAACAAGTGCAACTGAGTCCATGAATAAGCCCAT 1775
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      CAAAAAGCTTGGGCAGGACTCGATGTCAGCATCAAAATCAGTTGCAAAGAAAGAAACTTT 1835
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TCAGGTCAAATCTGGCATATGGGCTGACTCTTTGAGCCGAGGATTGATTGATTTGAATAT 1895
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      AACTTCGTCACAAAAGAAGGTCGATCTCTCCGATGTTGGGATTGTCGGACCGCTGAGCGG 1955
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      CGGATCTGAGGATAAAGGCCCGGGGGCGACGATGGGCACAGCACCAGGCCTTGTCAGTTC 2015
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TAGTTTTCCATCTAAAACAGAAACATCCAGTGGAAGCGGTCATTTTCAGCACCAACAGTT 2075
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TGGAAGCTTTAAGTGATTTTTATCCAGGATATGTCTTTTGTTCTATGGTTCTTGCAGAGT 2135
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      ACTTCTTGGAGCATTCGTACAGCTCCATGCCTATAAGAGTAAACGTGTATATAGCTACCA 2195
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      AACTCTGTGCGATGATCAGGAGACGTGTTGCCAACTAACCAGCATCTTCTCTGCCCTTGA 2255
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      GGCATTAATATTTTTTTACTTATGGCGAAATGGATATGTTTTGTGTACATGAGTAAAGAA 2315
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      CCAATGCCATGGTAGCAATTGTAAAAAGGGTTCATCAATTATGTGTGATACACGCTCATA 2375
consensus_10160#2      ------------------------------------------------------------
consensus_10160#1      ------------------------------------------------------------
                                                                                   

consensus_10160#0      TGAATTTTGAAAAATGAATAACGCAAAGCATTCTGGATGC 2415
consensus_10160#2      ----------------------------------------
consensus_10160#1      ----------------------------------------