These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10168#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1289 fasta sequence [AAACGCAAAAGATCCCAAACCCCTAAATCACCCGCTCCCCAGTCCCCACCTCCTCCTCCTCCTCCTCTCGCTGGTGTCTCGGGTGGCGGCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGA-GGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGCTCAACTTATAATGTCAAGGATCTTGACCTTACAAGACCTGCAGCCGCAAAGAACCCTCCTAGGCCACAGTTTCAAACAACTACAGAGGAGG-TTTTAAAGAAAGCCGATTTTA-GGAATGTTAGATTTCTGGCCAACTTTCTTACAGAAGCT-GGCATTATAATCAAGAGGAGTCAGACTCGTATAAGTGCG-AAAGCTCAGCGTAAGGTTGCAAGAGAGATTAAAACCGCCCGTGCATTGGGGCTATTGCCTTTCACAACAATGGGCCAAAGACCATTCATTTATGGCAGATCTGTGGAGGTGAATCTTTCAGAGGAGGAATATGGTTACGACTTTGTAGATCGGAGGGCAGGTGAGCCTGATGAGAATGCAGACGACGCTGTGCCTGATGAGGACGTTGCGCCTGGTGTGGAGAATGCATAAGCATTTTTCAAGGGCTTGCCATTCTGCAATGCTCTGCATTTCTTCTGTTACTCATTCGACACGGTTCCACATGCCTTCCTGCCTGATAGTCATCTACTCTTGCCCGGATCATAGCCCAGGTTCAATAAATTGTAGTATTTCGCATGTTATGTACACTATAATCTCGGTTTCTGGTTTTGCTTGTTGTGACATGATCAGCAAAATTTTTGGCTTGCTAGTCTCCAGGTTGGAGATCATGTGCCCCACCTAACATTAACATGAAAATGATCCAGACGAGATCCAGTCCTTAATTAATTTTAAGGCAGTCCCAGTAAGTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK101839 [AAACGCAAAAGATCCCAAACCCCTAAATCACCCGCTCCCCAGTCCCCACCTCCTCCTCCTCCTCCTCTCGCTGGTGTCTCGGGTGGCGGCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGA GGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGCTGAACTTATAATGTCAAGGATCTTGACCTTACAAGACCTGCAGCCGCAAAGAACCCTCCTAGGCCACAGTTTCAAACAACTACAGAGGAGG TTTTAAAGAAAGCCGATTTTA GGAATGTTAGATTTCTGGCCAACTTTCTTACAGAAGCT GGCATTATAATCAAGAGGAGTCAGACTCGTATAAGTGCG AAAGCTCAGCGTAAGGTTGCAAGAGAGATTAAAACCGCCCGTGCATTGGGGCTATTGCCTTTCACAACAATGGGCCAAAGACCATTCATTTATGGCAGATCTGTGGAGGTGAATCTTTCAGAGGAGGAATATGGTTACGACTTTGTAGATCGGAGGGCAGGTGAGCCTGATGAGAATGCAGACGACGCTGTGCCTGATGAGGACGTTGCGCCTGGTGTGGAGAATGCATAAGCATTTTTCAAGGGCTTGCCATTCTGCAATGCTCTGCATTTCTTCTGTTACTCATTCGACACGGTTCCACATGCCTTCCTGCCTGATAGTCATCTACTCTTGCCCGGATCATAGCCCAGGTTCAATAAATTGTAGTATTTCGCATGTTATGTACACTATAATCTCGGTTTCTGGTTTTGCTTGTTGTGACATGATCAGCAAAATTTTTGGCTTGCTAGTCTCCAGGTTGGAGATCATGTGCCCCACCTAACATTAACATGAAAATGATCCAGACGAGATCCA ] [+] EMBL AU070268 [ GCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGANCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGAGGGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGNTCAACTTATAATGTNAAGGATCTTGACCTTACAAGACCTGCAGCCGCAAAGAACCCTCCTAGGCCACAGTTTCAAACAACTACAGAGGAGGTTTTTAAAGAAAGCCGATTTTAGGGAATGTTAGATTTCTGGCCAACTTTCTTACAGNAGCTGGGCATTATAATCAAGAGGAGTCAGACTCGTATAAGTGCGAAAAGCTCAGCGTAAGGn ] [+] EMBL AU197668 [ GCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGA GGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGCTCAACTTATAATGTCAA ] [+] EMBL OSR29731A [ GCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCG ] [+] EMBL OSR29691A [ GCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGA ] [+] EMBL AU183974 [ CTGATGAGAATGCAGACGACGCTGTGCCTGATGAGGACGTTGCGCCTGGTGTGGAGAATGCATAAGCATTTTTCAAGGGCTTGCCATTCTGCAATGCTCTGCATTTCTTCTGTTACTCATTCGACACGGTTCCACATGCCTTCCTGCCTGATAGTCATCTACTCTTGCCCGGATCATAGCCCAGGTTCAATAAATTGTAGTATTTCGCATGTTATGTACACTATAATCTCGGTTTCTGGTTTTGCTTGTTGTGACATGATCAGCAAAATTTTTGGCTTGCTAGTCTCCAGGTTGGAGATCATGTGCCCCACCTAACAaaaa ] [+] EMBL AU173413 [ CCGGATCANAGCCCAGGTTCAATAAATTGTAGTATTTCGCATGTTATGTACCCTATAATCTCGGTTTNTGGTTTTGCTTGTTGTGACATGATCAGCAAAATTTTTGGCTTGCTAGTNTCCAGGTTGGAGATCATGTGCCCCCCCTAACATTAACATGAAAATGATCCAGACGAGATCCAGTCCTTAATTAATTTTAAGGCAGTCCCAGTAAGTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||