cluster # 10182

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Oryza sativa
cluster # 10182 cluster # 10182 Sequences # 7 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10182#0 length = 406 sequences # 7

consensusID : consensus_10182#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 406
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT----A-ATATATAG-CCGGGGCTTCCATTTTTTTCATTCACATATGCCTCACCCAACAACATTTAGTCGTAGCAAATCCCCCTTTTACTTTAAGTCAAAAAAAAATCGGGGGAAACAAAAACAAAAGCAGAGCCCGGGCGGTAAAATCAAAAGACGATGAACAACCGGGGAACCCCCAAAACAGGGGGGGAAACATCTTCGAATCAAAAATGAACAATTAAACAGGGGTTTTTTTGACGATGACGGTTTATTTGCCACCAAACTCCTCCAAACCCGGGGGCTTGTAGGCAAAAAAACTGATGAACTGCCCCTGCCTGACGTTGTCAAACCCGATGATACGGACAAATGCTTTAGGGTCCCCCTT]

[+] EMBL CF299255             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAA ATATATAGCCCGGGGCTTCCATTTTTTTAATTCACATATGCCTCACCCAACAACATTTAGTCGTAGCAAATCCCCCTTTTACTTCAAGTCAAAAAAAGATCGGGGGAAACAAAAACAAAAGCAGAGCCCGGGCGGTAAAATCAAAAGACGATGAACAACCGGGGAACCCCCAAAACAGGGGGGGAAACATCTTCGAATCAAAAATGAACAATTAAACAGGGGTTTTTTTGACGATGACGGTTTATTTGCCACCAAACTCCTCCAAACCCGGGGGCTTGTAGGCAAAAAAACTGATGACCTGCCCCTGCCTGACGTTGTCAAACCCGATGATACGGACAAATGCTTTAGGGTCCCCC  ]
[+] EMBL CF300005             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAA ATATATAGCCCGGGGCTTCCATTTTTTTCATTCACATTTGCCTCACCCAACAACATTTAGTCGGAGCAAATCCCCCTTTTACTTTAAGTCAAAAAAAAATCGGGGGAAACAAAAACAAAAGCAGAGCCCGGGCGGTAAAATCAAAAAACGATGAACAACCGGGGAACCCCCAAAACAGGGGGGGAAACTTCTTCGAATCAAAAATGAACAATTAAACAGGGGTTTTTTTGACGATGACGGTTTATTTGCCACCAAACTCCTTGAAAC                                                                                           ]
[+] EMBL CF334843             [    TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT       TTTATAG CCGGGGCTTCCATTTTTTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAAATACCCCTTTTACATTAAGTCAAAAAAAAATCGGGGGAAACAAAAACAAAAGCAGAGCCCGGGCGGTAAAATCAAAAGACGATGAACAAACGGGGAACCCCCAAAACAGGGGGGGAAACATTTTCGAATCAAAGATGAACAATTAAACAGGGGTTTTTTTGACGATGACGGGTTAATTGCCACCAAACTCCTTCAAACCCGGGGGCTTGTAGGCGAAAAAACTGATGAACTGCACCTGCCTGACGTTGTCAAACCCGATGATACGGACAAATGCTTTAGGGGACCCCTT]
[+] EMBL CF298180             [    TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT       TTTATAG CCGGGGCTTCCATATTTTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAAATCCCCCTTTTACTTTAAGTCAAAAAAAAATCGGGGGAAACAAAAACAAAAGCCGAGCCCGGCCGGTAAAATCAAAAAACGATGAACAACCTGGGAACCCCCAAAACAGGGGGGGAAACATCTTCGAATCAAAAATGAACAATTAAACAGGGGTTTTTTTGACGATGACGGTTTATTTGCCACCAAACTCCTCGCAACCCGGGGGCTTGTAGGCAAAAAAACTGATGAACTGCCCCTGCCTGACGTTGTCAAACCCGATGATACGGACAAATGCTTCAGGGTCCCCC  ]
[+] EMBL CF335901             [      TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT       TTTATAG CCGGGGCTTCCATATTTTTAATTCACATATGCCTCACCCAACAACATTTAGTCGTAGCAAATCCCCCTTTTACTTTAAGTCAAAAAGAGATCGGGGGAAACAAAAACAAAAGCAGAGCCCGGGCGGTAAAATCAAAAGACGATGAACAAACGGGGAACCCCCAAAACAGGGGGGGAAACATTTTCGAATCAAAGATGAACAATTAAACAGGGCTTTTTTTGACGATGACGGTTTATTTGCCACCAAACTCCTCCCAACCCGGGGGCTTGTAGGCAAAAAAACTGATGAACTGCCCCTGCCTGACGTTGTCAAACCCGATGATACGGACAAATGCATTAGGGTACCC   ]
[+] EMBL CF302176             [        TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT    ATATA ATAG CCGGGGCTTCCATATTTTTCATTCACATATGCCTCACCCAACAACATATAGGCGTAGCAAATCCCCCTTTTACTTTAAGTCAAAAAAAAATCGGGGGAAACAAAAACAAAAGCCGAGCCCGGCCGGTAAAATCAAAAGACGATGAACAACCGGGGAACCCCCAAAACA                                                                                                                                                                                     ]
[+] EMBL CF298371             [                                                                                                                                                                      AAACAAAAGCAGAGCCCGGGCGGTTAAATCAAAAGACGATGAACAAACGGGGAACCCACAAAACAGGGGGGGAAACATCTTCGAATCAGAGATGAACAATTAAACAGGGGTTTTTTTGACGATGACGGGTTAATTGCCACCAAACTCCTCCAAACCCGGGGGCTTGGAGGCAAAAAAACTGATGAACTGCCCCTGCCTGACGTTGTCAAACCCGATGATACGGACAAATGCTTCAGGGGCCCC   ]




>consensus_10182#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATATATAGCCG
GGGCTTCCATTTTTTTCATTCACATATGCCTCACCCAACAACATTTAGTCGTAGCAAATC
CCCCTTTTACTTTAAGTCAAAAAAAAATCGGGGGAAACAAAAACAAAAGCAGAGCCCGGG
CGGTAAAATCAAAAGACGATGAACAACCGGGGAACCCCCAAAACAGGGGGGGAAACATCT
TCGAATCAAAAATGAACAATTAAACAGGGGTTTTTTTGACGATGACGGTTTATTTGCCAC
CAAACTCCTCCAAACCCGGGGGCTTGTAGGCAAAAAAACTGATGAACTGCCCCTGCCTGA
CGTTGTCAAACCCGATGATACGGACAAATGCTTTAGGGTCCCCCTT

clustalw multiple alignements is not computed in this case