|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_102#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2885 fasta sequence
[CGTTATCCTCCGCGAGCTCGAGGCCGCCGGCGGCGGCGGCGCCTTGTCTCCTCAGTCGCAGGAGCACGTCGACGAAGTCCTCCTCCTCGCCCTCCGCCTTCTCGTCGTCGTGCGCCGCCAGGATCTCGCCCAGGAACCTGTCCGACTCGTCGGCCATGTCGTCTAGCTTCTTGTTCAGGCCCGTCAGCTTCCTCGCCGCCCACCCCGCCGCCTCCGGCAGCCGGTCCACCCACTGGAACCCGGCGAGCAGCTCCGACGTGTCCGCCATCATCTTCCTGAACCTCTCCGCCGTCGCGCCGCTGCCGCCGGCCGCCACGCGGGTGATGACCCCGTTCGTGTAGGCGTACAGGAGCTCCCTGAGCTGGACGGCCCGCGCCGCCTCCGCGGCGCGGCGAGCGCGGGCGACGAGCGCGGCGGCCTCGGCGGCGCGGGCGGGCGCGGCGAGGGGAGAGGAGGTGCGCCACGGCCAGCTTCTTGGTGCGGCGCCACGCGTCGCCGAGCGGCGCGAAGGACATGTTGCGCCCGCCGTAGAAGAGCCTCTCGGCGCTGTGCGACGGCGGCCGGGAGGCGAAGGCGAGGTCGTGGCCCCTGTACAGGTCGGCGGCGGCGGCCGCCGTGGACACGACCAGCGCCCCCGCACGGCCCAGGCGGAGGAACATGAGGCCCCCGTCGCTGCCGTAGCGGCGGTGCAGGGCGTCCAACGAGCGGTGCGGGAGCTCCCCGACGAGGTGGAGGTGGCCGACGAACGGAAGCGACGGCGGCGACGGCGGAAGCTTCCCCTTTCCAAGATTCTTGATCGCGGCGACGACGACGACGACGAACACGAGCAACGCTGCGGCGACGACGACGTACGATGACATCTTGGTGGATTTTGCCACAAAGGTTTGGATTTTTACTCTGAATAGCTTGGTGCTTATAAATCAATCAGAGCACAATGCATTCCATGTCCTTGTAACCAATCAACACGGTGGCTGGTGGTGGCTATCAGATCGATTGCGAGTCTGGAATATTCTATGATAGATGTTTTTTTTTTCTCCAAATTGGATTTTTATAGAACCACATGTTTGATGAACTCTTTTGCCATGTAGTTGGGGATATTTTCTGAAGATCATCATAAATCATCTCCAGTTGGATGGCTGCTTTCTGGCTATAGTGCACGTATGTTTGTGAGTTGTGTCAGGTTGATCTAGAATTACATTCAGAAATACATGTCAAATATTTGCGTTATCAAGCACCAGCATTTTGTGCTGTGAAGTTCCAAAATACTCTGTACTGTTTACAGTCAAACACCTTTCTTATAATTTTTCAGGTAAGAGAACCTTTCATATAAAACACAAAGTACAGGTTTCTTCAATACCACCTGTATTAGTGCAGTAAAATTGCACTTTGACACATCCACACAAAATTCAGTGCAAACCCAAAAACAGAAGAGAAAAGAAGAGAACATGGGAAGAAGCTCTCATTATTGTATAGACCCCCATGCTTTTCAATCCAATCCTATGAATAGGCAGTGCCATCTTAACACAAACCTACTTCTTACATTTTCCCCTATTTATAACTTCTGTCCCTCATCTATATCTAGATGCCAAATTATTCAATCTCAATGCCTGACATGGCCTTGGCCTGGATCAGGATTGCCAACAAGGTAAGCAAGAACTCCTACCAATGGAGCATTGATGTAGGTAGTTGGTTCAGATTTCCTGAAATCGGCACGGTCATCCTCATAAACATCATCCTCCCCAGGCCCCCCAACAACTGCGCCAATTAACGGGTTTGGGTTCGGGCTAGATGAATTGTAGTAAGGCGTGCCGTCGTTGCACGCAATGCGCTGGGGATGGCTCTTGATCGAAGGCAACGATGATCCTCGATGGTGTATCCGTTGAGGATACCGATCGCCGTACCCGACCATGTATGACATTTTCATCGGGTTATCTCCTAATATATAATCAGCCTGCAAATAAGTAAATAAGTACAATATAATGTTCAGAGTTTAGTTAGTCAATGTTCCTGCATTTCATATTTGGATGTTATGTAGGACAATTCAGTAGTCGCTCCCTCCAATATAATTACTTTTGGATCTTGACATAATCTTTGTGATGCTACTTTGACAAAAAGTTATTTTAAATAAAAAGAGTTGCATATTATGACAGTTTGTTTAATGATAAGTCTAGTAACATCATTCTTACATAATCAGTTTATAATCTTTTTTATTAATAATTAAAGTTTAACATGCTTGACTTAGCATTATTTCAAAAGTTAGTTATATTTTGGGATGGAGGTACTACCTGCTTTCTGGCTAGCTGCTGAAGAGTGGCAGGACCAACCGAAACATTTCCACAGTTGACAGTGCGCGAGGAATTGGAGAGGTACTTGGCATAAGTCAGGAGCAGGAACGAAATGGATGTAACATGCTGCATGTTGCTGCCTCCAGGCTTGTAGATCATGCCCCCGGGCGTGTACGTGATGTGCGGAGACGACGACTCCGGAATCAGTGTGCAGATGAATCCATCTGCAAACTCCTTGTAGGATTGCAGAGATAGCACCTCGCCATCTATGAACTCCTGTAACCAAATTTGGAACCCATTTTCTCTTTGTGTCAGCTACTGATGTTTCTCTGAATTTGTTGCAGCTGCAGAAGGTGTGTTCAGAAACTGGAGGAGATTGATGGAGGCAAACCTTGGAGACAAGGACATTGATGCCGGCATGCTTGTTGTCCCAGCCGAATTCGTTGGTGCTATCCTCTGCTCCAAGGGTCTTGCCGTTGTTCTGAATGTAGTCGAGGTAGGTGCCTTCCTTGGAGGCTCTCCGTAGCCATGCTGCTCCCCACAGCAGCTCATCCTGCCAAGAATTTTCAGTCGTGTGAACTTTGAGATTTTTATTCACCC]
[+] EMBL AK120767 [CGTTATCCTCCGCGAGCTCGAGGCCGCCGGCGGCGGCGGCGCCTTGTCTCCTCAGTCGCAGGAGCACGTCGACGAAGTCCTCCTCCTCGCCCTCCGCCTTCTCGTCGTCGTGCGCCGCCAGGATCTCGCCCAGGAACCTGTCCGACTCGTCGGCCATGTCGTCTAGCTTCTTGTTCAGGCCCGTCAGCTTCCTCGCCGCCCACCCCGCCGCCTCCGGCAGCCGGTCCACCCACTGGAACCCGGCGAGCAGCTCCGACGTGTCCGCCATCATCTTCCTGAACCTCTCCGCCGTCGCGCCGCTGCCGCCGGCCGCCACGCGGGTGATGACCCCGTTCGTGTAGGCGTACAGGAGCTCCCTGAGCTGGACGGCCCGCGCCGCCTCCGCGGCGCGGCGAGCGCGGGCGACGAGCGCGGCGGCCTCGGCGGCGCGGGCGGGCGCGGCGAGGGGAGAGGAGGTGCGCCACGGCCAGCTTCTTGGTGCGGCGCCACGCGTCGCCGAGCGGCGCGAAGGACATGTTGCGCCCGCCGTAGAAGAGCCTCTCGGCGCTGTGCGACGGCGGCCGGGAGGCGAAGGCGAGGTCGTGGCCCCTGTACAGGTCGGCGGCGGCGGCCGCCGTGGACACGACCAGCGCCCCCGCACGGCCCAGGCGGAGGAACATGAGGCCCCCGTCGCTGCCGTAGCGGCGGTGCAGGGCGTCCAACGAGCGGTGCGGGAGCTCCCCGACGAGGTGGAGGTGGCCGACGAACGGAAGCGACGGCGGCGACGGCGGAAGCTTCCCCTTTCCAAGATTCTTGATCGCGGCGACGACGACGACGACGAACACGAGCAACGCTGCGGCGACGACGACGTACGATGACATCTTGGTGGATTTTGCCACAAAGGTTTGGATTTTTACTCTGAATAGCTTGGTGCTTATAAATCAATCAGAGCACAATGCATTCCATGTCCTTGTAACCAATCAACACGGTGGCTGGTGGTGGCTATCAGATCGATTGCGAGTCTGGAATATTCTATGATAGATGTTTTTTTTTTCTCCAAATTGGATTTTTATAGAACCACATGTTTGATGAACTCTTTTGCCATGTAGTTGGGGATATTTTCTGAAGATCATCATAAATCATCTCCAGTTGGATGGCTGCTTTCTGGCTATAGTGCACGTATGTTTGTGAGTTGTGTCAGGTTGATCTAGAATTACATTCAGAAATACATGTCAAATATTTGCGTTATCAAGCACCAGCATTTTGTGCTGTGAAGTTCCAAAATACTCTGTACTGTTTACAGTCAAACACCTTTCTTATAATTTTTCAGGTAAGAGAACCTTTCATATAAAACACAAAGTACAGGTTTCTTCAATACCACCTGTATTAGTGCAGTAAAATTGCACTTTGACACATCCACACAAAATTCAGTGCAAACCCAAAAACAGAAGAGAAAAGAAGAGAACATGGGAAGAAGCTCTCATTATTGTATAGACCCCCATGCTTTTCAATCCAATCCTATGAATAGGCAGTGCCATCTTAACACAAACCTACTTCTTACATTTTCCCCTATTTATAACTTCTGTCCCTCATCTATATCTAGATGCCAAATTATTCAATCTCAATGCCTGACATGGCCTTGGCCTGGATCAGGATTGCCAACAAGGTAAGCAAGAACTCCTACCAATGGAGCATTGATGTAGGTAGTTGGTTCAGATTTCCTGAAATCGGCACGGTCATCCTCATAAACATCATCCTCCCCAGGCCCCCCAACAACTGCGCCAATTAACGGGTTTGGGTTCGGGCTAGATGAATTGTAGTAAGGCGTGCCGTCGTTGCACGCAATGCGCTGGGGATGGCTCTTGATCGAAGGCAACGATGATCCTCGATGGTGTATCCGTTGAGGATACCGATCGCCGTACCCGACCATGTATGACATTTTCATCGGGTTATCTCCTAATATATAATCAGCCTGCAAATAAGTAAATAAGTACAATATAATGTTCAGAGTTTAGTTAGTCAATGTTCCTGCATTTCATATTTGGATGTTATGTAGGACAATTCAGTAGTCGCTCCCTCCAATATAATTACTTTTGGATCTTGACATAATCTTTGTGATGCTACTTTGACAAAAAGTTATTTTAAATAAAAAGAGTTGCATATTATGACAGTTTGTTTAATGATAAGTCTAGTAACATCATTCTTACATAATCAGTTTATAATCTTTTTTATTAATAATTAAAGTTTAACATGCTTGACTTAGCATTATTTCAAAAGTTAGTTATATTTTGGGATGGAGGTACTACCTGCTTTCTGGCTAGCTGCTGAAGAGTGGCAGGACCAACCGAAACATTTCCACAGTTGACAGTGCGCGAGGAATTGGAGAGGTACTTGGCATAAGTCAGGAGCAGGAACGAAATGGATGTAACATGCTGCATGTTGCTGCCTCCAGGCTTGTAGATCATGCCCCCGGGCGTGTACGTGATGTGCGGAGACGACGACTCCGGAATCAGTGTGCAGATGAATCCATCTGCAAACTCCTTGTAGGATTGCAGAGATAGCACCTCGCCATCTATGAACTCCTGTAACCAAATTTGGAACCCATTTTCTCTTTGTGTCAGCTACTGATGTTTCTCTGAATTTGTTGCAGCTGCAGAAGGTGTGTTCAGAAACTGGAGGAGATTGATGGAGGCAAACCTTGGAGACAAGGACATTGATGCCGGCATGCTTGTTGTCCCAGCCGAATTCGTTGGTGCTATCCTCTGCTCCAAGGGTCTTGCCGTTGTTCTGAATGTAGTCGAGGTAGGTGCCTTCCTTGGAGGCTCTCCGTAGCCATGCTGCTCCCCACAGCAGCTCATCCTGCCAAGAATTTTCAGTCGTGTGAACTTTGAGATTTTTATTCACCC]
consensusID : consensus_102#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1908 fasta sequence
[ACCTTTCTTATAATTTTTCAGGTAAGAGAACCTTTCATATAAAACACAAAGTACAGGTTTCTTCAATACCACCTGTATTAGTGCAGTAAAATTGCACTTTGACACATCCACACAAAATTCAGTGCAAACCCAAAAACAGAAGAGAAAAGAAGAGAACATGGGAAGAAGCTCTCATTATTGTATAGACCCCCATGCTTTTCAATCCAATCCTATGAATAGGCAGTGCCATCTTAACACAAACCTACTTCTTACATTTTCCCCTATTTATAACTTCTGTCCCTCATCTATATCTAGATGCCAAATTATTCAATCTCAATGCCTGACATGGCCTTGGCCTGGATCAGGATTGCCAACAAGGTAAGCAAGAACTCCTACCAATGGAGCATTGATGTAGGTAGTTGGTTCAGATTTCCTGAAATCGGCACGGTCATCCTCATAAACATCATCCTCCCCAGGCCCCCCAACAACTGCGCCAATTAACGGGTTTGGGTTCGGGCTAGATGAATTGTAGTAAGGCGTGCCGTCGTTGCACGCAATGCGCTGGGGATGGCTCTTGATCGAAGGCAACGATGATCCTCGATGGTGTATCCGTTGAGGATACCGATCGCCGTACCCGACCATGTATGACATTTTCATCGGGTTATCTCCTAATATATAATCAGCCTGCTTTCTGGCTAGCTGCTGAAGAGTGGCAGGACCAACCGAAACATTTCCACAGTTGACAGTGCGCGAGGAATTGGAGAGGTACTTGGCATAAGTCAGGAGCAGGAACGAAATGGATGTAACATGCTGCATGTTGCTGCCTCCAGGCTTGTAGATCATGCCCCCGGGCGTGTACGTGATGTGCGGAGACGACGACTCCGGAATCAGTGTGCAGATGAATCCATCTGCAAACTCCTTGTAGGATTGCAGAGATAGCACCTCGCCATCTATGAACTCCTTGGAGACAAGGACATTGATGCCGGCATGCTTGTTGTCCCAGCCGAATTCGTTGGTGCTATCCTCTGCTCCAAGGGTCTTGCCGTTGTTCTGAATGTAGTCGAGGTAGGTGCCTTCCTTGGAGGCTCTCCGTAGCCATGCTGCTCCCCACAGCAGCTCATCCTGATATCCATCGAAGTCGCAGTAGAACGGGCAGCCGCCGGCCCTGAGCTCCGGGTCGTCGCTGTACGCGCCCTTGTGTTCGTCCGCGAACTCGAACGCGCTCCTGGCGCCGGCGAGCAGCCGCGCGGCGTACGCCGGGTCGTCGTCGCGGAACACCATCGACGCCGCGGCCAGCGCCGCCGCCGTCTCCCCGGCCACGTCCGACCCCGGCCTCGCCGCGCTGATGTTGTACACCGTCCTCGCTGTGTCCATGTCCTCCGGCCGCTCCCAGCACCCGTGGTCCTTCGTTGGGTCGCCCACCTGAATGAAGATGACGCCGGGGTGGGAGATGGTCTTGAGGAGGTAGTCGGTGGCCCAGCGGACGGCGTCGGCGGCGTGGGCGCGCTCCGCGGGCGGCATGGCGTCGCCGAACTCGACGACGCCCCACGCCAGCATCGTGGCGGTGAACGCCATCGGGAAGCCGAACTTGACGTTGTCGCCGGCGTCGTAGTACCCGCCCTCCAGGTCGACGCCCGCCGCGCCGCCGTCCGACACCGCCGAGTCCCCTCGCCACGCCGCGCGCTGCCCCGCCGCCGGCAGCCGCCCCGACCGCTGCCCCTCGAAGAACAGGATCGACTTGGCCAGCGCGTCGCCGTAGTCATGCCCCGCCGCCGCCGCCGCCGCCGACGGCGCCGCGAGCGCCAGTAGCAAGCAGCAGCACACTAGCAGGACACGCACGCGCGAGCGGCGGCGGCGCACGGGAGCCGAGAGGAGCGCCATGTCGTCGAACACTCGCCGCCTCACTAGAGCATGCACGTGACGTGAGCA]
[-] EMBL AK106815 [ACCTTTCTTATAATTTTTCAGGTAAGAGAACCTTTCATATAAAACACAAAGTACAGGTTTCTTCAATACCACCTGTATTAGTGCAGTAAAATTGCACTTTGACACATCCACACAAAATTCAGTGCAAACCCAAAAACAGAAGAGAAAAGAAGAGAACATGGGAAGAAGCTCTCATTATTGTATAGACCCCCATGCTTTTCAATCCAATCCTATGAATAGGCAGTGCCATCTTAACACAAACCTACTTCTTACATTTTCCCCTATTTATAACTTCTGTCCCTCATCTATATCTAGATGCCAAATTATTCAATCTCAATGCCTGACATGGCCTTGGCCTGGATCAGGATTGCCAACAAGGTAAGCAAGAACTCCTACCAATGGAGCATTGATGTAGGTAGTTGGTTCAGATTTCCTGAAATCGGCACGGTCATCCTCATAAACATCATCCTCCCCAGGCCCCCCAACAACTGCGCCAATTAACGGGTTTGGGTTCGGGCTAGATGAATTGTAGTAAGGCGTGCCGTCGTTGCACGCAATGCGCTGGGGATGGCTCTTGATCGAAGGCAACGATGATCCTCGATGGTGTATCCGTTGAGGATACCGATCGCCGTACCCGACCATGTATGACATTTTCATCGGGTTATCTCCTAATATATAATCAGCCTGCTTTCTGGCTAGCTGCTGAAGAGTGGCAGGACCAACCGAAACATTTCCACAGTTGACAGTGCGCGAGGAATTGGAGAGGTACTTGGCATAAGTCAGGAGCAGGAACGAAATGGATGTAACATGCTGCATGTTGCTGCCTCCAGGCTTGTAGATCATGCCCCCGGGCGTGTACGTGATGTGCGGAGACGACGACTCCGGAATCAGTGTGCAGATGAATCCATCTGCAAACTCCTTGTAGGATTGCAGAGATAGCACCTCGCCATCTATGAACTCCTTGGAGACAAGGACATTGATGCCGGCATGCTTGTTGTCCCAGCCGAATTCGTTGGTGCTATCCTCTGCTCCAAGGGTCTTGCCGTTGTTCTGAATGTAGTCGAGGTAGGTGCCTTCCTTGGAGGCTCTCCGTAGCCATGCTGCTCCCCACAGCAGCTCATCCTGATATCCATCGAAGTCGCAGTAGAACGGGCAGCCGCCGGCCCTGAGCTCCGGGTCGTCGCTGTACGCGCCCTTGTGTTCGTCCGCGAACTCGAACGCGCTCCTGGCGCCGGCGAGCAGCCGCGCGGCGTACGCCGGGTCGTCGTCGCGGAACACCATCGACGCCGCGGCCAGCGCCGCCGCCGTCTCCCCGGCCACGTCCGACCCCGGCCTCGCCGCGCTGATGTTGTACACCGTCCTCGCTGTGTCCATGTCCTCCGGCCGCTCCCAGCACCCGTGGTCCTTCGTTGGGTCGCCCACCTGAATGAAGATGACGCCGGGGTGGGAGATGGTCTTGAGGAGGTAGTCGGTGGCCCAGCGGACGGCGTCGGCGGCGTGGGCGCGCTCCGCGGGCGGCATGGCGTCGCCGAACTCGACGACGCCCCACGCCAGCATCGTGGCGGTGAACGCCATCGGGAAGCCGAACTTGACGTTGTCGCCGGCGTCGTAGTACCCGCCCTCCAGGTCGACGCCCGCCGCGCCGCCGTCCGACACCGCCGAGTCCCCTCGCCACGCCGCGCGCTGCCCCGCCGCCGGCAGCCGCCCCGACCGCTGCCCCTCGAAGAACAGGATCGACTTGGCCAGCGCGTCGCCGTAGTCATGCCCCGCCGCCGCCGCCGCCGCCGACGGCGCCGCGAGCGCCAGTAGCAAGCAGCAGCACACTAGCAGGACACGCACGCGCGAGCGGCGGCGGCGCACGGGAGCCGAGAGGAGCGCCATGTCGTCGAACACTCGCCGCCTCACTAGAGCATGCACGTGACGTGAGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_102#0 CGTTATCCTCCGCGAGCTCGAGGCCGCCGGCGGCGGCGGCGCCTTGTCTCCTCAGTCGCA 60
consensus_102#1 ------------------------------------------------------------
consensus_102#0 GGAGCACGTCGACGAAGTCCTCCTCCTCGCCCTCCGCCTTCTCGTCGTCGTGCGCCGCCA 120
consensus_102#1 ------------------------------------------------------------
consensus_102#0 GGATCTCGCCCAGGAACCTGTCCGACTCGTCGGCCATGTCGTCTAGCTTCTTGTTCAGGC 180
consensus_102#1 ------------------------------------------------------------
consensus_102#0 CCGTCAGCTTCCTCGCCGCCCACCCCGCCGCCTCCGGCAGCCGGTCCACCCACTGGAACC 240
consensus_102#1 ------------------------------------------------------------
consensus_102#0 CGGCGAGCAGCTCCGACGTGTCCGCCATCATCTTCCTGAACCTCTCCGCCGTCGCGCCGC 300
consensus_102#1 ------------------------------------------------------------
consensus_102#0 TGCCGCCGGCCGCCACGCGGGTGATGACCCCGTTCGTGTAGGCGTACAGGAGCTCCCTGA 360
consensus_102#1 ------------------------------------------------------------
consensus_102#0 GCTGGACGGCCCGCGCCGCCTCCGCGGCGCGGCGAGCGCGGGCGACGAGCGCGGCGGCCT 420
consensus_102#1 ------------------------------------------------------------
consensus_102#0 CGGCGGCGCGGGCGGGCGCGGCGAGGGGAGAGGAGGTGCGCCACGGCCAGCTTCTTGGTG 480
consensus_102#1 ------------------------------------------------------------
consensus_102#0 CGGCGCCACGCGTCGCCGAGCGGCGCGAAGGACATGTTGCGCCCGCCGTAGAAGAGCCTC 540
consensus_102#1 ------------------------------------------------------------
consensus_102#0 TCGGCGCTGTGCGACGGCGGCCGGGAGGCGAAGGCGAGGTCGTGGCCCCTGTACAGGTCG 600
consensus_102#1 ------------------------------------------------------------
consensus_102#0 GCGGCGGCGGCCGCCGTGGACACGACCAGCGCCCCCGCACGGCCCAGGCGGAGGAACATG 660
consensus_102#1 ------------------------------------------------------------
consensus_102#0 AGGCCCCCGTCGCTGCCGTAGCGGCGGTGCAGGGCGTCCAACGAGCGGTGCGGGAGCTCC 720
consensus_102#1 ------------------------------------------------------------
consensus_102#0 CCGACGAGGTGGAGGTGGCCGACGAACGGAAGCGACGGCGGCGACGGCGGAAGCTTCCCC 780
consensus_102#1 ------------------------------------------------------------
consensus_102#0 TTTCCAAGATTCTTGATCGCGGCGACGACGACGACGACGAACACGAGCAACGCTGCGGCG 840
consensus_102#1 ------------------------------------------------------------
consensus_102#0 ACGACGACGTACGATGACATCTTGGTGGATTTTGCCACAAAGGTTTGGATTTTTACTCTG 900
consensus_102#1 ------------------------------------------------------------
consensus_102#0 AATAGCTTGGTGCTTATAAATCAATCAGAGCACAATGCATTCCATGTCCTTGTAACCAAT 960
consensus_102#1 ------------------------------------------------------------
consensus_102#0 CAACACGGTGGCTGGTGGTGGCTATCAGATCGATTGCGAGTCTGGAATATTCTATGATAG 1020
consensus_102#1 ------------------------------------------------------------
consensus_102#0 ATGTTTTTTTTTTCTCCAAATTGGATTTTTATAGAACCACATGTTTGATGAACTCTTTTG 1080
consensus_102#1 ------------------------------------------------------------
consensus_102#0 CCATGTAGTTGGGGATATTTTCTGAAGATCATCATAAATCATCTCCAGTTGGATGGCTGC 1140
consensus_102#1 ------------------------------------------------------------
consensus_102#0 TTTCTGGCTATAGTGCACGTATGTTTGTGAGTTGTGTCAGGTTGATCTAGAATTACATTC 1200
consensus_102#1 ------------------------------------------------------------
consensus_102#0 AGAAATACATGTCAAATATTTGCGTTATCAAGCACCAGCATTTTGTGCTGTGAAGTTCCA 1260
consensus_102#1 ------------------------------------------------------------
consensus_102#0 AAATACTCTGTACTGTTTACAGTCAAACACCTTTCTTATAATTTTTCAGGTAAGAGAACC 1320
consensus_102#1 ----------------------------ACCTTTCTTATAATTTTTCAGGTAAGAGAACC 32
********************************
consensus_102#0 TTTCATATAAAACACAAAGTACAGGTTTCTTCAATACCACCTGTATTAGTGCAGTAAAAT 1380
consensus_102#1 TTTCATATAAAACACAAAGTACAGGTTTCTTCAATACCACCTGTATTAGTGCAGTAAAAT 92
************************************************************
consensus_102#0 TGCACTTTGACACATCCACACAAAATTCAGTGCAAACCCAAAAACAGAAGAGAAAAGAAG 1440
consensus_102#1 TGCACTTTGACACATCCACACAAAATTCAGTGCAAACCCAAAAACAGAAGAGAAAAGAAG 152
************************************************************
consensus_102#0 AGAACATGGGAAGAAGCTCTCATTATTGTATAGACCCCCATGCTTTTCAATCCAATCCTA 1500
consensus_102#1 AGAACATGGGAAGAAGCTCTCATTATTGTATAGACCCCCATGCTTTTCAATCCAATCCTA 212
************************************************************
consensus_102#0 TGAATAGGCAGTGCCATCTTAACACAAACCTACTTCTTACATTTTCCCCTATTTATAACT 1560
consensus_102#1 TGAATAGGCAGTGCCATCTTAACACAAACCTACTTCTTACATTTTCCCCTATTTATAACT 272
************************************************************
consensus_102#0 TCTGTCCCTCATCTATATCTAGATGCCAAATTATTCAATCTCAATGCCTGACATGGCCTT 1620
consensus_102#1 TCTGTCCCTCATCTATATCTAGATGCCAAATTATTCAATCTCAATGCCTGACATGGCCTT 332
************************************************************
consensus_102#0 GGCCTGGATCAGGATTGCCAACAAGGTAAGCAAGAACTCCTACCAATGGAGCATTGATGT 1680
consensus_102#1 GGCCTGGATCAGGATTGCCAACAAGGTAAGCAAGAACTCCTACCAATGGAGCATTGATGT 392
************************************************************
consensus_102#0 AGGTAGTTGGTTCAGATTTCCTGAAATCGGCACGGTCATCCTCATAAACATCATCCTCCC 1740
consensus_102#1 AGGTAGTTGGTTCAGATTTCCTGAAATCGGCACGGTCATCCTCATAAACATCATCCTCCC 452
************************************************************
consensus_102#0 CAGGCCCCCCAACAACTGCGCCAATTAACGGGTTTGGGTTCGGGCTAGATGAATTGTAGT 1800
consensus_102#1 CAGGCCCCCCAACAACTGCGCCAATTAACGGGTTTGGGTTCGGGCTAGATGAATTGTAGT 512
************************************************************
consensus_102#0 AAGGCGTGCCGTCGTTGCACGCAATGCGCTGGGGATGGCTCTTGATCGAAGGCAACGATG 1860
consensus_102#1 AAGGCGTGCCGTCGTTGCACGCAATGCGCTGGGGATGGCTCTTGATCGAAGGCAACGATG 572
************************************************************
consensus_102#0 ATCCTCGATGGTGTATCCGTTGAGGATACCGATCGCCGTACCCGACCATGTATGACATTT 1920
consensus_102#1 ATCCTCGATGGTGTATCCGTTGAGGATACCGATCGCCGTACCCGACCATGTATGACATTT 632
************************************************************
consensus_102#0 TCATCGGGTTATCTCCTAATATATAATCAGCCTGCA--------AATAAGTAAATAAGTA 1972
consensus_102#1 TCATCGGGTTATCTCCTAATATATAATCAGCCTGCTTTCTGGCTAGCTGCTGAAGAGTGG 692
*********************************** * * ** *
consensus_102#0 CAATATAATGTTCAGAGTTTAGTTAGT---CAATGTTCCTGCATTTCA-----TATTTGG 2024
consensus_102#1 CAGGACCAACCGAAACATTTCCACAGTTGACAGTGCGCGAGGAATTGGAGAGGTACTTGG 752
** * * * *** *** ** ** * * * ** ** ****
consensus_102#0 ---ATGTTATGTAGGACAATTCAGTAGTCGCTCCCTCCAATATAAT--TACTTTTGGATC 2079
consensus_102#1 CATAAGTCAGGAGCAGGAACGAAATGGATGTAACATGCTGCATGTTGCTGCCTCCAGGCT 812
* ** * * ** * * * * * * * ** * * * * *
consensus_102#0 TTGACATAATCTTT------------GTGATGCTACTTTGACAAAAAGTT---ATTTTAA 2124
consensus_102#1 TGTAGATCATGCCCCCGGGCGTGTACGTGATG-TGCGGAGACGACGACTCCGGAATCAGT 871
* * ** ** ****** * * *** * * * * *
consensus_102#0 ATAAAAAGAGTTGCATATTATGACAGTTTGTTTAATGATAAGTCTAGTAACATCATTCTT 2184
consensus_102#1 GTGCAGATGAATCCATCTGCAAACTCCTTGTAGGATTGCAGAGATAGCACCTCGCCATCT 931
* * * * *** * ** **** ** * *** * * *
consensus_102#0 ACATAATC-----AGTTTATAATCTTTTT-------TATTAATAATTAAAGTTTAACATG 2232
consensus_102#1 ATGAACTCCTTGGAGACAAGGACATTGATGCCGGCATGCTTGTTGTCCCAGCCGAATTCG 991
* * ** ** * * ** * * * * * ** ** *
consensus_102#0 CTTGACTTAGCAT-TATTTCAAAAGT-TAGTTATATTTTGGGATGGAG--GTACTACCTG 2288
consensus_102#1 TTGGTGCTATCCTCTGCTCCAAGGGTCTTGCCGTTGTTCTGAATGTAGTCGAGGTAGGTG 1051
* * ** * * * * *** ** * * * ** * *** ** * ** **
consensus_102#0 CTTTCTGGCTAGCTGCTGAAGAGTGGCAGGACCAACCGAAACATTTC--CACAGTTGACA 2346
consensus_102#1 CCTTCCTTGGAGGCTCTCCGTAGCCATGCTGCTCCCCACAGCAGCTCATCCTGATATCCA 1111
* *** ** ** ** * ** * ** ** * * **
consensus_102#0 GTGCGCGAGGAATTGGAGAGGTACTTGGCATAAGTCAGGAGCAGGAACGAAATGGATGTA 2406
consensus_102#1 TCGAAGTCGCAGTAGAACGGGCAGCCGCCGGCCCTGAGCTCCGGGTCGTCGCTGTACGCG 1171
* * * * * * ** * * * * ** * ** ** * *
consensus_102#0 ACATGCTGCATGTTGCTGCCTCCAGGCTTGTAGATCATGCCCCCGGGCGTGTACGTGATG 2466
consensus_102#1 CCCTTGTGTTCGTCCGCGAACTCGAACGCGCTCCTGGCGCCGGCGAGCAGCCGCGCGGCG 1231
* * ** ** * * * * * *** ** ** ** * *
consensus_102#0 TGCG--GAGACGACGACTCCGGA----ATCAGTGTGCAGATGAATCCATCTGCAAACTCC 2520
consensus_102#1 TACGCCGGGTCGTCGTCGCGGAACACCATCGACGCCGCGGCCAGCGCCGCCGCCGTCTCC 1291
* ** * * ** ** * * * * *** * * * * * ** ****
consensus_102#0 TTG--TAGGATTG-CAGAGATAGCACCTCGCCATCTATGAACTCC--------TGTAACC 2569
consensus_102#1 CCGGCCACGTCCGACCCCGGCCTCGCCGCGCTGATGTTGTACACCGTCCTCGCTGTGTCC 1351
* * * * * * * ** *** ** ** ** *** **
consensus_102#0 AAATTTGGAACCCATTTTCTCTTTGTGTCAGCTACTGATGTTTCTCTGAATTTGTTGCAG 2629
consensus_102#1 ATGTCCTCCGGCCGCTCCCAGCACCCGTGGTCCTTCGTTGGGTCGCCCACCTGAATGAAG 1411
* * ** * * ** * * ** ** * * * ** **
consensus_102#0 CTGCAGAAGGTGTGTTCAGAAA-CTGGAGGAGATTGATGGAGGCAAACCT--TGGAGACA 2686
consensus_102#1 ATGACGCCGGGGTGGGAGATGGTCTTGAGGAGGTAGTCGGTGGCCCAGCGGACGGCGTCG 1471
** * ** *** ** ****** * * ** *** * * ** * *
consensus_102#0 AGGACATTGATGC---CGGCATGCTTGTTGTCCCAGCCGAATTCGTTGGTGCTATCCTCT 2743
consensus_102#1 GCGGCGTGGGCGCGCTCCGCGGGCGGCATGGCGTCGCCGAACTCGACGACGCCCCACGCC 1531
* * * * ** * ** ** ** * ****** *** * ** * *
consensus_102#0 -GCTCCAAGGGTCTTGCCGTTGTTCTGAA--TGTAGTCGAGGTAGGTGCCTTCCTTGGAG 2800
consensus_102#1 AGCATCGTGGCGGTGAACGCCATCGGGAAGCCGAACTTGACGTTGTCGCCGGCGTCGTAG 1591
** * ** * ** * *** * * * ** ** * *** * * * **
consensus_102#0 -----GCTCTCCGTAGCCATGCTGCTCCCCACAGCAGCTCATCCTGCCAAGAATTTTCA- 2854
consensus_102#1 TACCCGCCCTCCAGGTCGACGCCCGCCGCGCCGCCGTCCGACACCGCCGAGTCCCCTCGC 1651
** **** * * ** * * * * * * * *** ** **
consensus_102#0 ---GTCGTGTGA-ACTTTGAGATTTTTATTCACCC------------------------- 2885
consensus_102#1 CACGCCGCGCGCTGCCCCGCCGCCGGCAGCCGCCCCGACCGCTGCCCCTCGAAGAACAGG 1711
* ** * * * * * * ***
consensus_102#0 ------------------------------------------------------------
consensus_102#1 ATCGACTTGGCCAGCGCGTCGCCGTAGTCATGCCCCGCCGCCGCCGCCGCCGCCGACGGC 1771
consensus_102#0 ------------------------------------------------------------
consensus_102#1 GCCGCGAGCGCCAGTAGCAAGCAGCAGCACACTAGCAGGACACGCACGCGCGAGCGGCGG 1831
consensus_102#0 ------------------------------------------------------------
consensus_102#1 CGGCGCACGGGAGCCGAGAGGAGCGCCATGTCGTCGAACACTCGCCGCCTCACTAGAGCA 1891
consensus_102#0 -----------------
consensus_102#1 TGCACGTGACGTGAGCA 1908
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||