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Oryza sativa
cluster # 10255 cluster # 10255       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10255#0 length = 1987 sequences # 6  
consensus_10255#1 length = 603 sequences # 1  

consensusID : consensus_10255#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1987
fasta sequence
                              [AAACAGCTAATTTGTGTAGCGATCCAGCTACAGACAGACGACACCACAAACATAGCTAAGTAGCTTAGGCTTAGGCTTAGCTAAGTACAAGTGCACTTGCGCTTCAAATTTTGCCGGAAAAGCGACCACTAATTAAGCTACTGGCTAGAATGGCGATCGTTGACTTGGTCAATGCCGGAGAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACGGCGGCGTGGACGACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGCCGCCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGTCCCTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTTCTTCCAGGTGGTGAACCACGGCGTGGGCGGCGAGGTGGTGGGCGGCATGCTCGACGTGGCGCGCCGCTTCTTCGAGCTGCCGCAGCCGGAGCGGGAGCGGTACATGTCCGCCGACGTGCGGGCGCCGGTGAGGTACGGCACCAGCTTCAACCAGGTGAGGGACGCCGTGCTGTGCTGGCGCGACTTCCTCAAGCTCGCCTGCATGCCGCTCGCCGCCGTCGTCGAGTCATGGCCCACCTCGCCGGCCGACCTGCGGGAGGTGGCGTCGAGGTACGCGGAGGCGAACCAGCGCGTGTTCATGGAGGTGATGGAGGCGGCGCTGGAGGCGCTGGGCGTGGGCGGCGGCGGCGTGATGGAGGACCTGGCGGCGGGGACACAGATGATGACGGTGAACTGCTACCCGGAGTGCCCGCAGCCGGAGCTGACGTTGGGGATGCCGCCGCACTCGGACTACGGCTTCCTCACGCTGGTGCTCCAGGACGAGGTGGCCGGACTCCAGGTGATGCACGCCGGCGAGTGGCTCACCGTCGACCCGCTCCCGGGCTCCTTCGTCGTCAACGTCGGCGACCACTTGGAGATATTGAGCAATGGACGGTACAGGAGCGTGCTGCACAGGGTGAAGGTGAACTCGAGGAGGCTTCGGGTGTCGGTGGCGTCGTTCCACAGCGTGGCGCCGGAGAGGGTGGTGTCGCCGGCGCCGGAGCTCATCGACGACCGCCACCCGCGCCGCTACATGGACACCGACCTCGCCACCTTCCTCGCCTACCTCGCCTCCGCCGCCGGCAACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGATCGATCCATTCTTAATTGGATCATCTCTACACTATAATTAACTGGATCGGAGTACTCCTGTAATTATAATTATAATTATATTAGCTACTACTACTCATGATCCACCCCCGGTAATTATAATTGCGGAATTGCCTTGGCTAAGTTAGCTCCAAACACAGCCCACAGATCATCGATATGATTGATCAAACTCGATCTCACTTAATTAATTATATAACTACTATATTCACCTATATAGCTAGCTTGCTGTTAGCAGCTTAATTGCCGGAGTAAAATTAAATCAAATCAATCGATCGATTGATCGACAAGAGAACAAGTCAACAGCAGGGCCCAACTCCCTGAACGAGGCAGAGGCAGGATTTGACCGGTCAAACCTAGCTTTTCAGCTTAATTGCCTTCCCAACAATTCGATTGGCGCGCATTGACTAGCTAATAATATCCATACATATGAGAGTATACTATAATTAAGTTGTCTTGTTCTCATCGATCGATTGGTCGTCTGAAAAAGCCAAAGCCAGCTGTGGGTTTGCGTATGTATGCATGTAGTATATTTTTTTTCTAGTTATTAAAATAGTAAGTTGTTGTTTTGACTTTTCAAAGTCAACGTGATTGTACCTTGACGTACATAGTACTGAATCATGTACGTCATCACATATATATATATATTCCGAAAGAGTGTTCATCTCAAA]

[+] EMBL AK107117             [AAACAGCTAATTTGTGTAGCGATCCAGCTACAGACAGACGACACCACAAACATAGCTAAGTAGCTTAGGCTTAGGCTTAGCTAAGTACAAGTGCACTTGCGCTTCAAATTTTGCCGGAAAAGCGACCACTAATTAAGCTACTGGCTAGAATGGCGATCGTTGACTTGGTCAATGCCGGAGAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACGGCGGCGTGGACGACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGCCGCCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGTCCCTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTTCTTCCAGGTGGTGAACCACGGCGTGGGCGGCGAGGTGGTGGGCGGCATGCTCGACGTGGCGCGCCGCTTCTTCGAGCTGCCGCAGCCGGAGCGGGAGCGGTACATGTCCGCCGACGTGCGGGCGCCGGTGAGGTACGGCACCAGCTTCAACCAGGTGAGGGACGCCGTGCTGTGCTGGCGCGACTTCCTCAAGCTCGCCTGCATGCCGCTCGCCGCCGTCGTCGAGTCATGGCCCACCTCGCCGGCCGACCTGCGGGAGGTGGCGTCGAGGTACGCGGAGGCGAACCAGCGCGTGTTCATGGAGGTGATGGAGGCGGCGCTGGAGGCGCTGGGCGTGGGCGGCGGCGGCGTGATGGAGGACCTGGCGGCGGGGACACAGATGATGACGGTGAACTGCTACCCGGAGTGCCCGCAGCCGGAGCTGACGTTGGGGATGCCGCCGCACTCGGACTACGGCTTCCTCACGCTGGTGCTCCAGGACGAGGTGGCCGGACTCCAGGTGATGCACGCCGGCGAGTGGCTCACCGTCGACCCGCTCCCGGGCTCCTTCGTCGTCAACGTCGGCGACCACTTGGAGATATTGAGCAATGGACGGTACAGGAGCGTGCTGCACAGGGTGAAGGTGAACTCGAGGAGGCTTCGGGTGTCGGTGGCGTCGTTCCACAGCGTGGCGCCGGAGAGGGTGGTGTCGCCGGCGCCGGAGCTCATCGACGACCGCCACCCGCGCCGCTACATGGACACCGACCTCGCCACCTTCCTCGCCTACCTCGCCTCCGCCGCCGGCAACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGATCGATCCATTCTTAATTGGATCATCTCTACACTATAATTAACTGGATCGGAGTACTCCTGTAATTATAATTATAATTATATTAGCTACTACTACTCATGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK107230             [    AGCTAATTTGTGTAGCGATCCAGCTACAGACAGACGACACCACAAACATAGCTAAGTAGCTTAGGCTTAGGCTTAGCTAAGTACAAGTGCACTTGCGCTTCAAATTTTGCCGGAAAAGCGACCACTAATTAAGCTACTGGCTAGAATGGCGATCGTTGACTTGGTCAATGCCGGAGAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACGGCGGCGTGGACGACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGCCGCCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGTCCCTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTTCTTCCAGGTGGTGAACCACGGCGTGGGCGGCGAGGTGGTGGGCGGCATGCTCGACGTGGCGCGCCGCTTCTTCGAGCTGCCGCAGCCGGAGCGGGAGCGGTACATGTCCGCCGACGTGCGGGCGCCGGTGAGGTACGGCACCAGCTTCAACCAGGTGAGGGACGCCGTGCTGTGCTGGCGCGACTTCCTCAAGCTCGCCTGCATGCCGCTCGCCGCCGTCGTCGAGTCATGGCCCACCTCGCCGGCCGACCTGCGGGAGGTGGCGTCGAGGTACGCGGAAGCGAACCAGCGCGTGTTCATGGAGGTGATGGAGGCGGCGCTGGAGGCGCTGGGCGTGGGCGGCGGCGGCGTGATGGAGGACCTGGCGGCGGGGACACAGATGATGACGGTGAACTGCTACCCGGAGTGCCCGCAGCCGGAGCTGACGTTGGGGATGCCGCCGCACTCGGACTACGGCTTCCTCACGCTGGTGCTCCAGGACGAGGTGGCCGGACTCCAGGTGATGCACGCCGGCGAGTGGCTCACCGTCGACCCGCTCCCGGGCTCCTTCGTCGTCAACGTCGGCGACCACTTGGAGATATTGAGCAATGGACGGTACAGGAGCGTGCTGCACAGGGTGAAGGTGAACTCGAGGAGGCTTCGGGTGTCGGTGGCGTCGTTCCACAGCGTGGCGCCGGAGAGGGTGGTGTCGCCGGCGCCGGAGCTCATCGACGACCGCCACCCGCGCCGCTACATGGACACCGACCTCGCCACCTTCCTCGCCTACCTCGCCTCCGCCGCCGGCAACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGATCGATCCATTCTTAATTGGATCATCTCTACACTATAATTAACTGGATCGGAGTACTCCTGTAATTATAATTATAATTATATTAGCTACTACTACTCATGATCCACCCCCGGTAATTATAATTGCGGAATTGCCTTGGCTAAGTTAGCTCCAAACACAGCCCACAGATCATCGATATGATTGATCAAACTCGATCTCACTTAATTAATTATATAACTACTATATTCACCTATATAGCTAGCTTGCTGTTAGCAGCTTAATTGCCGGAGTAAAATTAAATCAAATCAATCGATCGATTGATCGACAAGAGAACAAGTCAACAGCAGGGCCCAACTCCCTGAACGAGGCAGAGGCAGGATTTGACCGGTCAAACCTAGCTTTTCAGCTTAATTGCCTTCCCAACAATTCGATTGGCGCGCATTGACTAGCTAATAATATCCATACATATGAGAGTATACTATAATTAAGTTGTCTTGTTCTCATCGATCGATTGGTCGTCTGAAAAAGCCAAAGCCAGCTGTGGGTTTGCGTATGTATGCATGTAGTATATTTTTTTTCTAGTTATTAAAATAGTAAGTTGTTGTTTTGACTTTTCAAAGTCAACGTGATTGTACCTTGACGTACATAGTACTGAATCATGTACGTCATCACATATATATATATATTCCGAAAGA              ]
[+] EMBL CB640825             [                      TCCAGCTACAGACAGACGACACCACAAACATAGCTAAGTAGCTTAGGCTTAGGCTTAGCTAAGTACAAGTGCACTTGCGCTTCAAATTTTGCCGGAAAAGCGACCACTAATTAAGCTACTGGCTAGAATGGCGATCGTTGACTTGGTCAATGCCGGAGAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACGGCGGCGTGGACGACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGCCGCCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGTCCCTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTTCTTCCAGGTGGTGAACCACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB640764             [                                                                  AGGCTTAGGCTTAGCTAAGTACAAGTGCACTTGCGCTTCAAATTTTGCCGGAAAAGCGACCACTAATTAAGCTACTGGCTAGAATGGCGATCGTTGACTTGGTCAATGCCGGAGAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACAGCGGCGTGGACGACAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB662417             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGATCGATCCATTCTTAATTGGATCATCTCTACACTATAATTAACTGGATCGGAGTACTCCTGTAATTATAATTATAATTATATTAGCTACTACTACTCATGATCCACCCCCGGTAATTATAATTGCGGAATTGCCTTGGCTAAGTTAGCTCCAAACACAGCCCACAGATCATCGATATGATTGATCAAACTCGATCTCACTTAATTAATTATATAACTACTATATTCACCTATATAGCTAGCTTGCTGTTAGCAGCTTAATTGCCGGAGTAAAATTAAATCAAATCAATCGATCGATTGATCGACAAGAGAACAAGTCAACAGCAGGGCCCAACTCCCTGAACGAGGCAGAGGCAGGATTTGACCGGTCAAACCTAGCTTTTCAGCTTAATTGCCTTCCCAACAATTCGATTGGCGCGCATTGACTAGCTAATAATATCCATACATATGAGAGTATACTATAATTAAGTTGTCTTGTTCTCATCGATCGATTGGTCGTCTGAAAAAGCCAAAGCCAGCTGTGGGTTTGCGTATGTATGCATGTAGTATATTTTTTTTCTAGTTATTAAAATAGTAAGTTGTTGTTTTGACTTTTCAAAGTCAACGTGATTGTACCTTGCCGTACATAGTACTGAATCATGTACGTCATCACATATATATATATATTCCGAAAGAGTGTTCATCTCAAA]
[-] EMBL CB662418             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGATCGATCCATTCTTAATTGGATCATCTCTACACTATAATTAACTGGATCGGAGTACTCCTGTAATTATAATTATAATTATATTAGCTACTACTACTCATGATCCACCCCCGGTAATTATAATTGCGGAATTGCCTTGGCTAAGTTAGCTCCAAACACAGCCCACAGATCATCGATATGATTGATCAAACTCGATCTCACTTAATTAATTATATAACTACTATATTCACCTATATAGCTAGCTTGCTGTTAGCAGCTTAATTGCCGGAGTAAAATTAAATCAAATCAATCGATCGATTGATCGACAAGAGAACAAGTCAACAGCAGGGCCCAACTCCCTGAACGAGGCAGAGGCAGGATTTGACCGGTCAAACCTAGCTTTTCAGCTTAATTGCCTTCCCAACAATTCGATTGGCGCGCATTGACTAGCTAATAATATCCATACATATGAGAGTATACTATAATTAAGTTGTCTTGTTCTCATCGATCGATTGGTCGTCTGAAAAAGCCAAAGCCAGCTGTGGGTTTGCGTATGTATGCATGTAGTATATTTTTTTTCTAGTTATTAAAATAGTAAGTTGTTGTTTTGACTTTTCAAAGTCAACGTGATTGTACCTTGACGTACATAGTACTGAATCATGTACGTCATCACATATATATATATATTCCGAAAGAGTGTTCATCTAAA ]


>consensus_10255#0 AAACAGCTAATTTGTGTAGCGATCCAGCTACAGACAGACGACACCACAAACATAGCTAAG TAGCTTAGGCTTAGGCTTAGCTAAGTACAAGTGCACTTGCGCTTCAAATTTTGCCGGAAA AGCGACCACTAATTAAGCTACTGGCTAGAATGGCGATCGTTGACTTGGTCAATGCCGGAG AGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACGGCGGCGTGGACG ACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTACCA GGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGCCG CCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGTCC CTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTTCT TCCAGGTGGTGAACCACGGCGTGGGCGGCGAGGTGGTGGGCGGCATGCTCGACGTGGCGC GCCGCTTCTTCGAGCTGCCGCAGCCGGAGCGGGAGCGGTACATGTCCGCCGACGTGCGGG CGCCGGTGAGGTACGGCACCAGCTTCAACCAGGTGAGGGACGCCGTGCTGTGCTGGCGCG ACTTCCTCAAGCTCGCCTGCATGCCGCTCGCCGCCGTCGTCGAGTCATGGCCCACCTCGC CGGCCGACCTGCGGGAGGTGGCGTCGAGGTACGCGGAGGCGAACCAGCGCGTGTTCATGG AGGTGATGGAGGCGGCGCTGGAGGCGCTGGGCGTGGGCGGCGGCGGCGTGATGGAGGACC TGGCGGCGGGGACACAGATGATGACGGTGAACTGCTACCCGGAGTGCCCGCAGCCGGAGC TGACGTTGGGGATGCCGCCGCACTCGGACTACGGCTTCCTCACGCTGGTGCTCCAGGACG AGGTGGCCGGACTCCAGGTGATGCACGCCGGCGAGTGGCTCACCGTCGACCCGCTCCCGG GCTCCTTCGTCGTCAACGTCGGCGACCACTTGGAGATATTGAGCAATGGACGGTACAGGA GCGTGCTGCACAGGGTGAAGGTGAACTCGAGGAGGCTTCGGGTGTCGGTGGCGTCGTTCC ACAGCGTGGCGCCGGAGAGGGTGGTGTCGCCGGCGCCGGAGCTCATCGACGACCGCCACC CGCGCCGCTACATGGACACCGACCTCGCCACCTTCCTCGCCTACCTCGCCTCCGCCGCCG GCAACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGATCGATCCATTCTTAATTGG ATCATCTCTACACTATAATTAACTGGATCGGAGTACTCCTGTAATTATAATTATAATTAT ATTAGCTACTACTACTCATGATCCACCCCCGGTAATTATAATTGCGGAATTGCCTTGGCT AAGTTAGCTCCAAACACAGCCCACAGATCATCGATATGATTGATCAAACTCGATCTCACT TAATTAATTATATAACTACTATATTCACCTATATAGCTAGCTTGCTGTTAGCAGCTTAAT TGCCGGAGTAAAATTAAATCAAATCAATCGATCGATTGATCGACAAGAGAACAAGTCAAC AGCAGGGCCCAACTCCCTGAACGAGGCAGAGGCAGGATTTGACCGGTCAAACCTAGCTTT TCAGCTTAATTGCCTTCCCAACAATTCGATTGGCGCGCATTGACTAGCTAATAATATCCA TACATATGAGAGTATACTATAATTAAGTTGTCTTGTTCTCATCGATCGATTGGTCGTCTG AAAAAGCCAAAGCCAGCTGTGGGTTTGCGTATGTATGCATGTAGTATATTTTTTTTCTAG TTATTAAAATAGTAAGTTGTTGTTTTGACTTTTCAAAGTCAACGTGATTGTACCTTGACG TACATAGTACTGAATCATGTACGTCATCACATATATATATATATTCCGAAAGAGTGTTCA TCTCAAA



consensusID : consensus_10255#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 603
fasta sequence
                              [CGATACACCTACAGAGAGACGACACCACAAACATAACTAAGTAGCTGACGCTCAGGGTTAGCTAAAAACGAGTGCACTTGCGCTGCATATTTTGCCGGACAAACAAGCACTAAGTACTGTACTGGATAGAAAGCTCCATCGTTGACTTGGGCAATGCCGTACAGCATCATGAGATGGACAGCATGACAGCGGCGGCCGATGATGGACGACCCCGGAACGGACGAGGGCGCCAGGACTACTGCCGGGGAGTCGGCCGGCACCTGTGCCACTGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCGGGGCTGCGACCGCCCTGTCCCAGTCGCCGGAGCCACCGACGCCTTCGCGAGGGCAGTGACACTCCCCGTGGAGGACCAGTGAAGCCATCACGTCCATTCGGAGCGCGACGCGACGATCCGGACACTGGACGTCGCGAGCCGGGAGTACGGATCCTTGCAGATGGTGAACCAAGGCCTGTGCGCATAGGCGTCGTGCAGAATGCTCCGCGGAGGTGCCCGCTTCTTCGAGATGCGCAACCGGAAGGCCAGGGTACTTGGCGGCCGACCAGTGGGCCCCGGGAGGGACGGTACGGCTT]

[+] EMBL CA755561             [CGATACACCTACAGAGAGACGACACCACAAACATAACTAAGTAGCTGACGCTCAGGGTTAGCTAAAAACGAGTGCACTTGCGCTGCATATTTTGCCGGACAAACAAGCACTAAGTACTGTACTGGATAGAAAGCTCCATCGTTGACTTGGGCAATGCCGTACAGCATCATGAGATGGACAGCATGACAGCGGCGGCCGATGATGGACGACCCCGGAACGGACGAGGGCGCCAGGACTACTGCCGGGGAGTCGGCCGGCACCTGTGCCACTGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCGGGGCTGCGACCGCCCTGTCCCAGTCGCCGGAGCCACCGACGCCTTCGCGAGGGCAGTGACACTCCCCGTGGAGGACCAGTGAAGCCATCACGTCCATTCGGAGCGCGACGCGACGATCCGGACACTGGACGTCGCGAGCCGGGAGTACGGATCCTTGCAGATGGTGAACCAAGGCCTGTGCGCATAGGCGTCGTGCAGAATGCTCCGCGGAGGTGCCCGCTTCTTCGAGATGCGCAACCGGAAGGCCAGGGTACTTGGCGGCCGACCAGTGGGCCCCGGGAGGGACGGTACGGCTT]


>consensus_10255#1 CGATACACCTACAGAGAGACGACACCACAAACATAACTAAGTAGCTGACGCTCAGGGTTA GCTAAAAACGAGTGCACTTGCGCTGCATATTTTGCCGGACAAACAAGCACTAAGTACTGT ACTGGATAGAAAGCTCCATCGTTGACTTGGGCAATGCCGTACAGCATCATGAGATGGACA GCATGACAGCGGCGGCCGATGATGGACGACCCCGGAACGGACGAGGGCGCCAGGACTACT GCCGGGGAGTCGGCCGGCACCTGTGCCACTGCGGCATTACCAGGCTTCCCGGCAACTACG TCCTCCGGGGCTGCGACCGCCCTGTCCCAGTCGCCGGAGCCACCGACGCCTTCGCGAGGG CAGTGACACTCCCCGTGGAGGACCAGTGAAGCCATCACGTCCATTCGGAGCGCGACGCGA CGATCCGGACACTGGACGTCGCGAGCCGGGAGTACGGATCCTTGCAGATGGTGAACCAAG GCCTGTGCGCATAGGCGTCGTGCAGAATGCTCCGCGGAGGTGCCCGCTTCTTCGAGATGC GCAACCGGAAGGCCAGGGTACTTGGCGGCCGACCAGTGGGCCCCGGGAGGGACGGTACGG CTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10255#0      AAACAGCTAATTTGTGTAGCGATCCAGCTACAGACAGACGACACCACAAACATAGCTAAG 60
consensus_10255#1      -------------------CGATACACCTACAGAGAGACGACACCACAAACATAACTAAG 41
                                          **** ** ******* ******************* *****

consensus_10255#0      TAGCTTAGGCTTAGGCTTAGCTAAGTACAAGTGCACTTGCGCTTCAAATTTTGCCGGAAA 120
consensus_10255#1      TAGCTGACGCTCAGGGTTAGCTAAAAACGAGTGCACTTGCGCTGCATATTTTGCCGGACA 101
                       ***** * *** *** ********  ** ************** ** *********** *

consensus_10255#0      AGCGACCACTAATTAAGCTACTGGCTAGAATGG-CGATCGTTGACTTGGTCAATGCCGGA 179
consensus_10255#1      AACAAGCACTAAGTACTGTACTGGATAGAAAGCTCCATCGTTGACTTGGGCAATGCCGTA 161
                       * * * ****** **   ****** ***** *  * ************* ******** *

consensus_10255#0      GAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGG-CGACGGCGGCGTGGA 238
consensus_10255#1      CAGCATCATGAGATGGACAGCATGACAGCGGCGGCCGATGATGGACGACCCCGGAACGGA 221
                        **** **  ****** ***** ** ********* ** ***** ****  ***   ***

consensus_10255#0      CGACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTAC 298
consensus_10255#1      CGAGGGC-GCCAGGACTACTGCCGGGGAGTCGGCCGGCACCTGTGCCACTGCGGCATTAC 280
                       ***  ** ** ** *********** *** ** ************* ** **********

consensus_10255#0      CAGGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGC 358
consensus_10255#1      CAGGCTTCCCGGCAACTACGTCCTCCGGGGCTGCGACCGCCCTGTCCCAGTCGCCGGAGC 340
                       ************************** ** ** *********** ** ** ****** **

consensus_10255#0      CGCCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGT 418
consensus_10255#1      CACCGACGCCTTCGCGAGGGCAGTGACACTCCCCGTGGAGGACCAGTGAAGCCATCACGT 400
                       * *** ****  ** * ** ******  ********** ***** **   ***  * ***

consensus_10255#0      CCCTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTT 478
consensus_10255#1      CCATTCGGAGCGCGACGCGACGATCCGGACACTGGACGTCGCGAGCCGGGAGTACGGATC 460
                       ** *********** ****  * ******* *******  *** ************* * 

consensus_10255#0      CTTCCAGGTGGTGAACCACGGCGTGGGCGGCGAGGTGGTGGGCGGCATGCTCGACGTGGC 538
consensus_10255#1      CTTGCAGATGGTGAACCAAGGCCTGTGCGCATAGGCGTCGTGCAGAATGCTCCGCGGAGG 520
                       *** *** ********** *** ** ***   *** *  * ** * ******  **  * 

consensus_10255#0      GCGCCGCTTCTTCGAGCTGCCGCAGCCGGAGCGGGAGCGGTACATGTCCGCCGACGTGCG 598
consensus_10255#1      TGCCCGCTTCTTCGAGATGC-GCAACCGGAAGGCCAG-GGTACTTGGCGGCCGACCAGTG 578
                          ************* *** *** *****  *  ** ***** ** * ******  * *

consensus_10255#0      GGCGCCGGTGAGGTACGGCACCAGCTTCAACCAGGTGAGGGACGCCGTGCTGTGCTGGCG 658
consensus_10255#1      GGCCCCGG-GAGGGACGGTAC-GGCTT--------------------------------- 603
                       *** **** **** **** **  ****                                 

consensus_10255#0      CGACTTCCTCAAGCTCGCCTGCATGCCGCTCGCCGCCGTCGTCGAGTCATGGCCCACCTC 718
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      GCCGGCCGACCTGCGGGAGGTGGCGTCGAGGTACGCGGAGGCGAACCAGCGCGTGTTCAT 778
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      GGAGGTGATGGAGGCGGCGCTGGAGGCGCTGGGCGTGGGCGGCGGCGGCGTGATGGAGGA 838
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CCTGGCGGCGGGGACACAGATGATGACGGTGAACTGCTACCCGGAGTGCCCGCAGCCGGA 898
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      GCTGACGTTGGGGATGCCGCCGCACTCGGACTACGGCTTCCTCACGCTGGTGCTCCAGGA 958
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CGAGGTGGCCGGACTCCAGGTGATGCACGCCGGCGAGTGGCTCACCGTCGACCCGCTCCC 1018
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      GGGCTCCTTCGTCGTCAACGTCGGCGACCACTTGGAGATATTGAGCAATGGACGGTACAG 1078
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      GAGCGTGCTGCACAGGGTGAAGGTGAACTCGAGGAGGCTTCGGGTGTCGGTGGCGTCGTT 1138
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CCACAGCGTGGCGCCGGAGAGGGTGGTGTCGCCGGCGCCGGAGCTCATCGACGACCGCCA 1198
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CCCGCGCCGCTACATGGACACCGACCTCGCCACCTTCCTCGCCTACCTCGCCTCCGCCGC 1258
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CGGCAACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGATCGATCCATTCTTAATT 1318
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      GGATCATCTCTACACTATAATTAACTGGATCGGAGTACTCCTGTAATTATAATTATAATT 1378
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      ATATTAGCTACTACTACTCATGATCCACCCCCGGTAATTATAATTGCGGAATTGCCTTGG 1438
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CTAAGTTAGCTCCAAACACAGCCCACAGATCATCGATATGATTGATCAAACTCGATCTCA 1498
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CTTAATTAATTATATAACTACTATATTCACCTATATAGCTAGCTTGCTGTTAGCAGCTTA 1558
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      ATTGCCGGAGTAAAATTAAATCAAATCAATCGATCGATTGATCGACAAGAGAACAAGTCA 1618
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      ACAGCAGGGCCCAACTCCCTGAACGAGGCAGAGGCAGGATTTGACCGGTCAAACCTAGCT 1678
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      TTTCAGCTTAATTGCCTTCCCAACAATTCGATTGGCGCGCATTGACTAGCTAATAATATC 1738
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CATACATATGAGAGTATACTATAATTAAGTTGTCTTGTTCTCATCGATCGATTGGTCGTC 1798
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      TGAAAAAGCCAAAGCCAGCTGTGGGTTTGCGTATGTATGCATGTAGTATATTTTTTTTCT 1858
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      AGTTATTAAAATAGTAAGTTGTTGTTTTGACTTTTCAAAGTCAACGTGATTGTACCTTGA 1918
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CGTACATAGTACTGAATCATGTACGTCATCACATATATATATATATTCCGAAAGAGTGTT 1978
consensus_10255#1      ------------------------------------------------------------
                                                                                   

consensus_10255#0      CATCTCAAA 1987
consensus_10255#1      ---------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)