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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10256#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1081 fasta sequence
[ACCGCGAACACGGTAAGCCATCTGATCAGTGGCTCGCCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT-GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA-CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCA-GGCATCAAACTGCACAG-CTTAACAAAAAAAAA]
[+] EMBL AK067267 [ACCGCGAACACGGTAAGCCATCTGATCAGTGGCTCGCCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGGCAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCA GGCATCAAAC ]
[+] EMBL AK104809 [ CCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGAC ]
[+] EMBL CB685322 [ cccttcatAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTG ]
[+] EMBL OSS14484A [ CTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCC GCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACG CGAAGCCGAA NAGTNGAGGAC GNCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGC GNAGAGGATCGTG ]
[-] EMBL CB685323 [ CCGGCGTGGGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATATCTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTTTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGTCTGCAGGAGTGAAACTCA GGCATCAA ]
[+] EMBL CF197291 [ CAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGATGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCA GGCATCAAACTGCACAG CTTAA ]
[+] EMBL BI812145 [ GCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAACCTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATT CAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCAGGGCATTCAACTGCCCAGCCTTACCAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||