|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10280#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1668 fasta sequence
[TTCAGTCTTCCCTTCCAAAATCACACAGAAAACCCTCACACAGAAAACTGCCGATGGCGGACGCCGTCGCCGCCTACGATGCGCTGCCCGCGCCTCCCTCTCCACCCTCACCCGCGTTGCCACCGCCGTTCCAGCCCCCGCCCCCCGATACCCCGATATCCGACGCCACCCCATCCGCCGCCGAAACCCCCAATCTCCCCGACACCCCCGCCTCCGCCTCCCCCTTCTCCGACGCCGCGCTCGCCGCCGACGCCTCCGATGCCGATGCCTCAGCCGTCGCCGCGCCACCCGACGACGACGGGACCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGCCGCCGCCGAACAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGGGCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGCCGGCGCCAACGGCCGCCTCCCCAAGCCCTCCAGCGGCGACGACGAGCTCGTCCTCACCCCGGCGCCCCGATTCGCGGCCGAGCGCAACGACGACGCGCCCGATCTGCCCGTGCTCCTCTCCCGCGTCTTCAAGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGATACCGGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCCTTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCCACGCTCCCGTAGGCTACGATGTGTTTGGATTTGGATACCGCGACATGGATGGTACCAAGGTGCACAAAGCATGGAGGGCCAATTATGCCGATCAAGGCTATGGCGAGGGCGATGTCCTCGGCTTCTACATTCATCTACCTGATGGAGAGCTGTATGAGCCCAAGCAGCCTTTCCTGGTTCACTACAAGGGGCTTCCTTTCCGCGCAGAAGCTCCCAAGGCAGCTGAGCAGAAGACGCCGGATCCAGTTCCTGGTAGTGAGATATGCTACTTCAAGAATGGGGTATGCCAGGGCACTGCTTTTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACCAGCCAAACTGCGAAGTCAGATTCAACTTTGGTCCCAATTTTGAGTTCTTTCCAGAAGATTTTGGAGGTCGATCAGTTCCTCAACCAATGAATAATGTGCCTTATCGACCATATCAGCTGGCGAATGAGGTGCCTGCAGAAAACGGTACTGCTGAAAAAACCATTAAACTGCAGTGAAAATTCTGCTTTAGTTAGAGCTTATGTAATCCGGTTAAACAGCACGCGGGCTGATGGCTATAGCTGGTTTAGTAATGTTTGTCTGGTTAGATGGATGCTGTAGTTATTGAATATTTTTCACTTGATGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGCCTTCAATCTTTCCCATCCATGATGGGGCGAAGTTAATCCGAGATGTTGGGGGGCGGTAAGGGCGGTTGCACGTAGTCTAGCAGTGGGATGAGGATTAAGGGCGACAGTTTAATACTCATAATATGTAATATTTGGTCAATAATGTTTGGCCGAATCTTATCCTAAGGAGGAGTAATACAAATATATGATA]
[+] EMBL AK122002 [TTCAGTCTTCCCTTCCAAAATCACACAGAAAACCCTCACACAGAAAACTGCCGATGGCGGACGCCGTCGCCGCCTACGATGCGCTGCCCGCGCCTCCCTCTCCACCCTCACCCGCGTTGCCACCGCCGTTCCAGCCCCCGCCCCCCGATACCCCGATATCCGACGCCACCCCATCCGCCGCCGAAACCCCCAATCTCCCCGACACCCCCGCCTCCGCCTCCCCCTTCTCCGACGCCGCGCTCGCCGCCGACGCCTCCGATGCCGATGCCTCAGCCGTCGCCGCGCCACCCGACGACGACGGGACCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGCCGCCGCCGAACAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGGGCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGCCGGCGCCAACGGCCGCCTCCCCAAGCCCTCCAGCGGCGACGACGAGCTCGTCCTCACCCCGGCGCCCCGATTCGCGGCCGAGCGCAACGACGACGCGCCCGATCTGCCCGTGCTCCTCTCCCGCGTCTTCAAGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGATACCGGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCCTTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCCACGCTCCCGTAGGCTACGATGTGTTTGGATTTGGATACCGCGACATGGATGGTACCAAGGTGCACAAAGCATGGAGGGCCAATTATGCCGATCAAGGCTATGGCGAGGGCGATGTACTCGGCTTCTACATTCATCTACCTGATGGAGAGCTGTATGAGCCCAAGCAGCCTTTCCTGGTTCACTACAAGGGGCTTCCTTTCCGCGCAGAAGCTCCCAAGGCAGCTGAGCAGAAGACGCCGGATCCAGTTCCTGGTAGTGAGATATGCTACTTCAAGAATGGGGTATGCCAGGGCACTGCTTTTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACCAGCCAAACTGCGAAGTCAGATTCAACTTTGGTCCCAATTTTGAGTTCTTTCCAGAAGATTTTGGAGGTCGATCAGTTCCTCAACCAATGAATAATGTGCCTTATCGACCATATCAGCTGGCGAATGAGGTGCCTGCAGAAAACGGTACTGCTGAAAAAACCATTAAACTGCAGTGAAAATTCTGCTTTAGTTAGAGCTTATGTAATCCGGTTAAACAGCACGCGGGCTGATGGCTATAGCTGGTTTAGTAATGTTTGTCTGGTTAGATGGATGCTGTAGTTATTGAATATTTTTCACTTGATGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGCCTTCAATCTTTCCCATCCATGATGGGGCGAAGTTAATCCGAGATGTTGGGGGGCGGTAAGGGCGGTTGCACGTAGTCTAGCAGTGGGATGAGGATTAAGGGCGACAGTTTAATACTCATAATATGTAATATTTGGTCAATAATGTTTGGCCGAATCTTATCCTAAGGAGGAGTAATACAAATA ]
[+] EMBL CB621440 [ aCCCCCTTCTCCGACGCCGCGCTCGCCGCCGACGCCTCCGATGCCGATGCCTCGGCCGTCGCCGCGCCACCCGACGACGACGGGGCCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGCCGCCGCCGAGCAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGGGCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGCCGGCGCCAACGGCCGCCTCCCCAAGCCCTCCAGCGGCGACGACGAGCTCGTCCTCACCCCGGCGCCCCGATTCGCGGCCGAGCGCAACGACGACGCGCCCGATCTGCCCGTGCTCCTCTCCCGCGTCTTCAAGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGATACCGGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCCTTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCCACGCTCCCGTAGGCTACGATGTGTTTGGATTTGGATACCGCGACATGGATGGTACCAAGGTGCACAAAGCATGGAGGGCCAATTATGCCGATCAAGGCTATGGCGAGGGCGATGTCCTCGGCTTCTACATTCATCTACCTGATGGAGAGCTGTATGAGCCCAAG ]
[-] EMBL CB621441 [ GCTATGGCGAGGGCGATGTCCTCGGCTTCTACATTCATCTACCTGATGGAGAGCTGTATGAGCCCAAGCAGCCTTTCCTGGTTCACTACAAGGGGCTTCCTTTCCGCGCAGAAGCTCCCAAGGCAGCTGAGCAGAAGACGCCGGATCCAGTTCCTGGTAGTGAGATATGCTACTTCAAGAATGGGGTATGCCAGGGCACTGCTTTTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACCAGCCAAACTGCGAAGTCAGATTCAACTTTGGTCCCAATTTTGAGTTCTTTCCAGAAGATTTTGGAGGTCGATCAGTTCCTCAACCAATGAATAATGTGCCTTATCGACCATATCAGCTGGCGAATGAGGTGCCTGCAGAAAACGGTACTGCTGAAAAAACCATTAAACTGCAGTGAAAATTCTGCTTTAGTTAGAGCTTATGTAATCCGGTTAAACAGCACGCGGGCTGATGGCTATAGCTGGTTTAGTAATGTTTGTCTGGTTAGATGGATGCTGTAGTTATTGAATATTTTTCACTTGATGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGCCTTCAATCTTTCCCATCCATGATGGGGCGAAGTTAATCCGAGATGTTGGGGGGCGGTAAGGGCGGTTGCACGTAGTCTAGCAGTGGGATGAGGATTAAGGGCGACAGTTTAATACTCATAATATGTAAGATTTGGTCAATAATGTTTGGCCGAATCTTATCCTAAGGAGGAGTAATACAAATATATGATA]
consensusID : consensus_10280#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1585 fasta sequence
[CCTCTCTTCTCTTCTCTCTCCACCCTCACCCGCGTTGCCACCGCCGTTCCAGCCCCCGCCCCCCGATACCCCGATATCCGACGCCACCCCATCCGCCGCCGAAACCCCCAATCTCCCCGACACCCCCGCCTCCGCCTCCCCCTTCTCCGACGCCGCGCTCGCCGCCGACGCCTCCGATGCCGATGCCTCAGCCGTCGCCGCGCCACCCGACGACGACGGGACCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGCCGCCGCCGAACAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGGGCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGCCGGCGCCAACGGCCGCCTCCCCAAGCCCTCCAGCGGCGACGACGAGCTCGTCCTCACCCCGGCGCCCCGATTCGCGGCCGAGCGCAACGACGACGCGCCCGATCTGCCCGTGCTCCTCTCCCGCGTCTTCAAGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGATACCGGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCCTTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCCACGCTCCCGTAGGCTACGATGTGTTTGGATTTGGATACCGCGACATGGATGGTACCAAGGTGCACAAAGCATGGAGGGCCAATTATGCCGATCAAGGCTATGGCGAGGGCGATGTACTCGGCTTCTACATTCATCTACCTGATGGAGAGCTGTATGAGCCCAAGCAGCCTTTCCTGGTTCACTACAAGGGGCTTCCTTTCCGCGCAGAAGCTCCCAAGGCAGCTGAGCAGAAGACGCCGGATCCAGTTCCTGGTAGTGAGATATGCTACTTCAAGAATGGGGTATGCCAGGGCACTGCTTTTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACCAGCCAAACTGCGAAGTCAGATTCAACTTTGGTCCCAATTTTGAGTTCTTTCCAGAAGATTTTGGAGGTCGATCAGTTCCTCAACCAATGAATAATGTGCCTTATCGACCATATCAGCTGGCGAATGAGGTGCCTGCAGAAAACGGTACTGCTGAAAAAACCATTAAACTGCAGTGAAAATTCTGCTTTAGTTAGAGCTTATGTAATCCGGTTAAACAGCACGCGGGCTGATGGCTATAGCTGGTTTAGTAATGTTTGTCTGGTTAGATGGATGCTGTAGTTATTGAATATTTTTCACTTGATGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGCCTTCAATCTTTCCCATCCATGATGGGGCGAAGTTAATCCGAGATGTTGGGGGGCGGTAAGGGCGGTTGCACGTAGTCTAGCAGTGGGATGAGGATTAAGGGCGACAGTTTAATACTCATAATATGTAATATTTGGTCAATAATGTTTGGCCGAATCTTATCCTAAGGAGGAGTAATACAAATAGATGAG]
[+] EMBL AK105738 [CCTCTCTTCTCTTCTCTCTCCACCCTCACCCGCGTTGCCACCGCCGTTCCAGCCCCCGCCCCCCGATACCCCGATATCCGACGCCACCCCATCCGCCGCCGAAACCCCCAATCTCCCCGACACCCCCGCCTCCGCCTCCCCCTTCTCCGACGCCGCGCTCGCCGCCGACGCCTCCGATGCCGATGCCTCAGCCGTCGCCGCGCCACCCGACGACGACGGGACCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGCCGCCGCCGAACAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGGGCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGCCGGCGCCAACGGCCGCCTCCCCAAGCCCTCCAGCGGCGACGACGAGCTCGTCCTCACCCCGGCGCCCCGATTCGCGGCCGAGCGCAACGACGACGCGCCCGATCTGCCCGTGCTCCTCTCCCGCGTCTTCAAGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGATACCGGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCCTTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCCACGCTCCCGTAGGCTACGATGTGTTTGGATTTGGATACCGCGACATGGATGGTACCAAGGTGCACAAAGCATGGAGGGCCAATTATGCCGATCAAGGCTATGGCGAGGGCGATGTACTCGGCTTCTACATTCATCTACCTGATGGAGAGCTGTATGAGCCCAAGCAGCCTTTCCTGGTTCACTACAAGGGGCTTCCTTTCCGCGCAGAAGCTCCCAAGGCAGCTGAGCAGAAGACGCCGGATCCAGTTCCTGGTAGTGAGATATGCTACTTCAAGAATGGGGTATGCCAGGGCACTGCTTTTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACCAGCCAAACTGCGAAGTCAGATTCAACTTTGGTCCCAATTTTGAGTTCTTTCCAGAAGATTTTGGAGGTCGATCAGTTCCTCAACCAATGAATAATGTGCCTTATCGACCATATCAGCTGGCGAATGAGGTGCCTGCAGAAAACGGTACTGCTGAAAAAACCATTAAACTGCAGTGAAAATTCTGCTTTAGTTAGAGCTTATGTAATCCGGTTAAACAGCACGCGGGCTGATGGCTATAGCTGGTTTAGTAATGTTTGTCTGGTTAGATGGATGCTGTAGTTATTGAATATTTTTCACTTGATGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGCCTTCAATCTTTCCCATCCATGATGGGGCGAAGTTAATCCGAGATGTTGGGGGGCGGTAAGGGCGGTTGCACGTAGTCTAGCAGTGGGATGAGGATTAAGGGCGACAGTTTAATACTCATAATATGTAATATTTGGTCAATAATGTTTGGCCGAATCTTATCCTAAGGAGGAGTAATACAAATAGATGAG]
[+] EMBL CA766224 [ TTTGAGTTCTTT CNGAAGATTTTGGAGGTCGATCNGTTCCTCAACCAATGAATAATGTGCCTTATCGACCATATCAGCTGGCGAATGAGGTGCCTGCAGAAAACGGTACTGCTGAAAAAACCATTAAACTGCAGTGAAAATTCTGCTTTAGTTAGAGCTTATGTAATCCGGTTAAACAGCACGCGGGCTGATGGCTATAGCTGGTTTAGTAATGTTTGTCTGGTTAGATGGATGCTGTAGTTATTGAATATCTTTCACTTGATGGTTTGGCCAT ]
consensusID : consensus_10280#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1294 fasta sequence
[ACCCCCTTCTCCGACGCCGCGCCGCCGATGCATCCGATGCTGATGCCTCGGGCGTCGCCGCGCCACCCGACGACGACGGGACCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGGCGCCGCCGAGCAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGGGCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGGCGGCGCCAACGGCCGCCTCCCCAAGCCCTCCAGCGGCGAGGATGAGCTCGTCCTCACCCCGGCGCCCCGATTCGCCGCCGAGCGCAACGACGACGCGCCCGATCGGCCCGTGCTCCTCTCCCGCGTCTTCAAGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGCTACCGGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCCTTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCCACGCACCCGTTGGCTACGATGTGTTTGGATTCGGATACCGCGACATGGATGGCACCAAGGTGCACAAGGCATGGAGGGCCAATTACGCTGAGCAAGGCTATGGCGATGGCGATGTCCTCGGCTTCTACATTCATCTTCCTGA-CGGGGAGCTGTATGAGCCC-AAGCAGCCC--TTCCTGGTTCACTACAAGGGGCTTCCT-TTCCGCGCA-GAAGCTCCCAAGGCGGCTGA-GCAGAAGACGCCGGATCCAGTTCCTGGTAG-CGAGATATGCTACTTCAAGAATGGGATATGCCAGGGCACTGCTTTTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACCAACCAAACTGTCAAGTCAGGTTCAACTTTGGTCCCAATTTTGAGTTCTTCCCAGAAGATTTTGGAGGTCGATTGATTCCTCGACCAATGAGTGACGTGCCTTATAGACCATTTGAGCTGGCGAATGGCGGGCCTGCTGAAAATGGTACTGCTGAAAAAAACATTTAACTGCAGTGAAAATTCTGCTTTAGTTATGTAGAATAGAGCATAATCATGTAATCCGGTTAAAGAGCGCGCAGGCTGA-TTGGTTAGTTTGTCTGGTTATTAAATAT-TTTATCACCTGAGGTTCTTCTGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGGCTTCAATCTTTCCCATCAACGCATGGCTTTAATACTGTTAACACAAGA]
[+] EMBL AK106270 [ACCCCCTTCTCCGACGCCGCGCCGCCGATGCATCCGATGCTGATGCCTCGGGCGTCGCCGCGCCACCCGACGACGACGGGACCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGGCGCCGCCGAGCAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGGGCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGGCGGCGCCAACGGCCGCCTCCCCAAGCCCTCCAGCGGCGAGGATGAGCTCGTCCTCACCCCGGCGCCCCGATTCGCCGCCGAGCGCAACGACGACGCGCCCGATCGGCCCGTGCTCCTCTCCCGCGTCTTCAAGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGCTACCGGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCCTTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCCACGCACCCGTTGGCTACGATGTGTTTGGATTCGGATACCGCGACATGGATGGCACCAAGGTGCACAAGGCATGGAGGGCCAATTACGCTGAGCAAGGCTATGGCGATGGCGATGTCCTCGGCTTCTACATTCATCTTCCTGA CGGGGAGCTGTATGAGCCC AAGCAGCCC TTCCTGGTTCACTACAAGGGGCTTCCT TTCCGCGCA GAAGCTCCCAAGGCGGCTGA GCAGAAGACGCCGGATCCAGTTCCTGGTAG CGAGATATGCTACTTCAAGAATGGGATATGCCAGGGCACTGCTTTTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACCAACCAAACTGTCAAGTCAGGTTCAACTTTGGTCCCAATTTTGAGTTCTTCCCAGAAGATTTTGGAGGTCGATTGATTCCTCGACCAATGAGTGACGTGCCTTATAGACCATTTGAGCTGGCGAATGGCGGGCCTGCTGAAAATGGTACTGCTGAAAAAAACATTTAACTGCAGTGAAAATTCTGCTTTAGTTATGTAGAATAGAGCATAATCATGTAATCCGGTTAAAGAGCGCGCAGGCTGA TTGGTTAGTTTGTCTGGTTATTAAATAT TTTATCACCTGAGGTTCTTCTGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGGCTTCAATCTTTCCCATCAACGCATGGCTTTAATACTGTTAACACAAGA]
[+] EMBL BI806984 [ CTGACCGGGGA CTTTATGAGCCCAAACCAGCCCCTTTCCTG TCACTACCAAGGGCTTCCTNTTCCGCGCAGGAAGCTCCCAA GC GCTGACGCAGAAGACGCCGGATCCAGTTCCT GTAGCCGAGATATGCTACTTCAAGAAT GGATATGCCA GGCACTGCTTTTGTGGACATTCCTGGA GGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACCAACCAAACTGTCAAGTCAGGTTCAACTTTGGTCCCAATTTTGAGTTCTTCCCAGAAGATTTTGGA GTCGATTGATTCCTCGACCAATGAGTGACGTGCCTTATAGACCATTTGAGCTGGCGAATGGCGGGCCTGCTGAAAATGGTACTGCTGAAAAAAACATTTAACTGCAGTGAAAATTCTGCTTTAGTTATGTAGAATAGAGCATAATCATGTAATCCGGTTAAAGAGCGCGCAGGCTGACTTGGTTAGTTTGTCTGGTTATTAAATATCCTTATCACCTGAaaaaaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10280#0 TTCAGTCTTCCCTTCCAAAATCACACAGAAAACCCTCACACAGAAAACTGCCGATGGCGG 60
consensus_10280#1 ------------------------------------------------------------
consensus_10280#2 ------------------------------------------------------------
consensus_10280#0 ACGCCGTCGCCGCCTACGATGCGCTGCCCGCGCCTCCCTCTCCACCCTCACCCGCGTTGC 120
consensus_10280#1 ----------------------CCTCTCTTCTCTTCTCTCTCCACCCTCACCCGCGTTGC 38
consensus_10280#2 ------------------------------------------------------------
consensus_10280#0 CACCGCCGTTCCAGCCCCCGCCCCCCGATACCCCGATATCCGACGCCACCCCATCCGCCG 180
consensus_10280#1 CACCGCCGTTCCAGCCCCCGCCCCCCGATACCCCGATATCCGACGCCACCCCATCCGCCG 98
consensus_10280#2 ------------------------------------------------------------
consensus_10280#0 CCGAAACCCCCAATCTCCCCGACACCCCCGCCTCCGCCTCCCCCTTCTCCGACGCCGCGC 240
consensus_10280#1 CCGAAACCCCCAATCTCCCCGACACCCCCGCCTCCGCCTCCCCCTTCTCCGACGCCGCGC 158
consensus_10280#2 --------------------------------------ACCCCCTTCTCCGACGCCGCGC 22
*********************
consensus_10280#0 TCGCCGCCGACGCCTCCGATGCCGATGCCTCAGCCGTCGCCGCGCCACCCGACGACGACG 300
consensus_10280#1 TCGCCGCCGACGCCTCCGATGCCGATGCCTCAGCCGTCGCCGCGCCACCCGACGACGACG 218
consensus_10280#2 ----CGCCGATGCATCCGATGCTGATGCCTCGGGCGTCGCCGCGCCACCCGACGACGACG 78
****** ** ******** ******** * **************************
consensus_10280#0 GGACCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGCCGCCGCCGA 360
consensus_10280#1 GGACCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGCCGCCGCCGA 278
consensus_10280#2 GGACCAACCCGTTGGGCGGCGCCATGAAGCACATGGCCCTCGCGCCCCCGGCGCCGCCGA 138
************************************************** *********
consensus_10280#0 ACAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGG 420
consensus_10280#1 ACAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGG 338
consensus_10280#2 GCAAGAAGTCCAAGAAGAAGAACAGCAACAGCGTCTGGACCAGGCCCAACTCCCGCAAGG 198
***********************************************************
consensus_10280#0 GCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGCCGGCGCCAACG 480
consensus_10280#1 GCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGCCGGCGCCAACG 398
consensus_10280#2 GCAAGAAGAAGGCCAAGCAGCCGGCCAACGCCCTCGCCGGCGGCAGCGGCGGCGCCAACG 258
************************************************ ***********
consensus_10280#0 GCCGCCTCCCCAAGCCCTCCAGCGGCGACGACGAGCTCGTCCTCACCCCGGCGCCCCGAT 540
consensus_10280#1 GCCGCCTCCCCAAGCCCTCCAGCGGCGACGACGAGCTCGTCCTCACCCCGGCGCCCCGAT 458
consensus_10280#2 GCCGCCTCCCCAAGCCCTCCAGCGGCGAGGATGAGCTCGTCCTCACCCCGGCGCCCCGAT 318
**************************** ** ****************************
consensus_10280#0 TCGCGGCCGAGCGCAACGACGACGCGCCCGATCTGCCCGTGCTCCTCTCCCGCGTCTTCA 600
consensus_10280#1 TCGCGGCCGAGCGCAACGACGACGCGCCCGATCTGCCCGTGCTCCTCTCCCGCGTCTTCA 518
consensus_10280#2 TCGCCGCCGAGCGCAACGACGACGCGCCCGATCGGCCCGTGCTCCTCTCCCGCGTCTTCA 378
**** **************************** **************************
consensus_10280#0 AGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGATACC 660
consensus_10280#1 AGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGATACC 578
consensus_10280#2 AGTCCGACAAGGTCGAGGTCTCCGACGACCGCCTCACCGCCGGCAGCACAAAGGGCTACC 438
******************************************************* ****
consensus_10280#0 GGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCC 720
consensus_10280#1 GGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCC 638
consensus_10280#2 GGATGGTGCGCGCCACCCGCGGCGTCGCTGCCGGCGCTTGGTACTTCGAGGTCAAGGTCC 498
************************************************************
consensus_10280#0 TTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCC 780
consensus_10280#1 TTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCC 698
consensus_10280#2 TTCACCTCGGCAGCACCGGCCACACCCGCCTTGGATGGGCTACCAACAATGCTGACATCC 558
************************************************************
consensus_10280#0 ACGCTCCCGTAGGCTACGATGTGTTTGGATTTGGATACCGCGACATGGATGGTACCAAGG 840
consensus_10280#1 ACGCTCCCGTAGGCTACGATGTGTTTGGATTTGGATACCGCGACATGGATGGTACCAAGG 758
consensus_10280#2 ACGCACCCGTTGGCTACGATGTGTTTGGATTCGGATACCGCGACATGGATGGCACCAAGG 618
**** ***** ******************** ******************** *******
consensus_10280#0 TGCACAAAGCATGGAGGGCCAATTATGCCGATCAAGGCTATGGCGAGGGCGATGTCCTCG 900
consensus_10280#1 TGCACAAAGCATGGAGGGCCAATTATGCCGATCAAGGCTATGGCGAGGGCGATGTACTCG 818
consensus_10280#2 TGCACAAGGCATGGAGGGCCAATTACGCTGAGCAAGGCTATGGCGATGGCGATGTCCTCG 678
******* ***************** ** ** ************** ******** ****
consensus_10280#0 GCTTCTACATTCATCTACCTGATGGAGAGCTGTATGAGCCCAAGCAGCCTTTCCTGGTTC 960
consensus_10280#1 GCTTCTACATTCATCTACCTGATGGAGAGCTGTATGAGCCCAAGCAGCCTTTCCTGGTTC 878
consensus_10280#2 GCTTCTACATTCATCTTCCTGACGGGGAGCTGTATGAGCCCAAGCAGCCCTTCCTGGTTC 738
**************** ***** ** *********************** **********
consensus_10280#0 ACTACAAGGGGCTTCCTTTCCGCGCAGAAGCTCCCAAGGCAGCTGAGCAGAAGACGCCGG 1020
consensus_10280#1 ACTACAAGGGGCTTCCTTTCCGCGCAGAAGCTCCCAAGGCAGCTGAGCAGAAGACGCCGG 938
consensus_10280#2 ACTACAAGGGGCTTCCTTTCCGCGCAGAAGCTCCCAAGGCGGCTGAGCAGAAGACGCCGG 798
**************************************** *******************
consensus_10280#0 ATCCAGTTCCTGGTAGTGAGATATGCTACTTCAAGAATGGGGTATGCCAGGGCACTGCTT 1080
consensus_10280#1 ATCCAGTTCCTGGTAGTGAGATATGCTACTTCAAGAATGGGGTATGCCAGGGCACTGCTT 998
consensus_10280#2 ATCCAGTTCCTGGTAGCGAGATATGCTACTTCAAGAATGGGATATGCCAGGGCACTGCTT 858
**************** ************************ ******************
consensus_10280#0 TTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACC 1140
consensus_10280#1 TTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACC 1058
consensus_10280#2 TTGTGGACATTCCTGGAGGGCGGTACTACCCAGCTGCGTCAATGTATACACTGCCTGACC 918
************************************************************
consensus_10280#0 AGCCAAACTGCGAAGTCAGATTCAACTTTGGTCCCAATTTTGAGTTCTTTCCAGAAGATT 1200
consensus_10280#1 AGCCAAACTGCGAAGTCAGATTCAACTTTGGTCCCAATTTTGAGTTCTTTCCAGAAGATT 1118
consensus_10280#2 AACCAAACTGTCAAGTCAGGTTCAACTTTGGTCCCAATTTTGAGTTCTTCCCAGAAGATT 978
* ******** ******* ***************************** **********
consensus_10280#0 TTGGAGGTCGATCAGTTCCTCAACCAATGAATAATGTGCCTTATCGACCATATCAGCTGG 1260
consensus_10280#1 TTGGAGGTCGATCAGTTCCTCAACCAATGAATAATGTGCCTTATCGACCATATCAGCTGG 1178
consensus_10280#2 TTGGAGGTCGATTGATTCCTCGACCAATGAGTGACGTGCCTTATAGACCATTTGAGCTGG 1038
************ ****** ******** * * ********* ****** * ******
consensus_10280#0 CGAATGAGGTGCCTGCAGAAAACGGTACTGCTGAAAAAACCATTAAACTGCAGTGAAAAT 1320
consensus_10280#1 CGAATGAGGTGCCTGCAGAAAACGGTACTGCTGAAAAAACCATTAAACTGCAGTGAAAAT 1238
consensus_10280#2 CGAATGGCGGGCCTGCTGAAAATGGTACTGCTGAAAAAAACATTTAACTGCAGTGAAAAT 1098
****** * ****** ***** **************** **** ***************
consensus_10280#0 TCTGCTTTAGTTAGAGCTTATGTAATCCGGTTAAACAGCACGCGGGCTGATGGCTATAGC 1380
consensus_10280#1 TCTGCTTTAGTTAGAGCTTATGTAATCCGGTTAAACAGCACGCGGGCTGATGGCTATAGC 1298
consensus_10280#2 TCTGCTTTAGTTATGTAGAATAGAGCATAATCATGTAATCCGGTTAAAGAGCGCGCAGGC 1158
************* ** * * * * ** ** ** **
consensus_10280#0 TGGTTTAGTAATGTTTGTCTGGTTAGATGGATGCTGTAGTTATTGAATATTTTTCACTTG 1440
consensus_10280#1 TGGTTTAGTAATGTTTGTCTGGTTAGATGGATGCTGTAGTTATTGAATATTTTTCACTTG 1358
consensus_10280#2 TGATTGGTTA--GTTTGTCTGGTTAT-TAAATATTTTA-TCACCTGAGGTTCTTC----- 1209
** ** ** ************* * ** * ** * * * ** ***
consensus_10280#0 ATGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGCCTTCAATCTTTCCCATCCATG- 1499
consensus_10280#1 ATGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGCCTTCAATCTTTCCCATCCATG- 1417
consensus_10280#2 -TGGTTTGGCCATTTGACCTTCGTGTAGCAACGCATGGCTTCAATCTTTCCCATCAACGC 1268
************************************ ***************** * *
consensus_10280#0 ATGGGGCGAA----GTTAATCCGAGATGTTGGGGGGCGGTAAGGGCGGTTGCACGTAGTC 1555
consensus_10280#1 ATGGGGCGAA----GTTAATCCGAGATGTTGGGGGGCGGTAAGGGCGGTTGCACGTAGTC 1473
consensus_10280#2 ATGGCTTTAATACTGTTAACACAAGA---------------------------------- 1294
**** ** ***** * ***
consensus_10280#0 TAGCAGTGGGATGAGGATTAAGGGCGACAGTTTAATACTCATAATATGTAATATTTGGTC 1615
consensus_10280#1 TAGCAGTGGGATGAGGATTAAGGGCGACAGTTTAATACTCATAATATGTAATATTTGGTC 1533
consensus_10280#2 ------------------------------------------------------------
consensus_10280#0 AATAATGTTTGGCCGAATCTTATCCTAAGGAGGAGTAATACAAATATATGATA 1668
consensus_10280#1 AATAATGTTTGGCCGAATCTTATCCTAAGGAGGAGTAATACAAATAGATGAG- 1585
consensus_10280#2 -----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||