cluster # 10294

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Oryza sativa
cluster # 10294 cluster # 10294 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10294#0 length = 1364 sequences # 7
consensusID : consensus_10294#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1364
fasta sequence
                              [GTCCGTCTCTCTCTCTCTCTCTTCTTCTCTTGTCAGTCTCGCGCCTCCTCCTCCTCCTCATACGCAGCAGCAAGCAGCCAAGCATGGAGACGCCCCTCTCCAGCAGGAGGATCACCCGCTCCATGGCCAAGGCCTCCGCCGCCGCCCCCGACGCCACGTCCACGGCCCACCCGCCGCGCCCCGCCCTGCACGACATCACCAACGACTCCCCCATCGTCGGCCTCGCCTCCTCGGGCCTCCGCACGCCGGCCTCCACCGCCGCCAAGGCCCGCCCCACCAGGGCCTCCCGCCGCACCCCCGGATCCGGCGAGGCACTCCTCCGCGGCCAGGTCAAGACGCTCCTCCAGAAGGTCCACCACGACGCCTCCTCCTCCTCCTCCTGCGCCGCAGCCGCTCCTCCCTCCCCCAACATCCTCCGCATCCACGCGCCCATCGGTCTCGCCAGGTCGCCCGCCCACCTCCTCGCCCCCACGCCGGCCAACACGCCGCACCTCACCGCCGCCGCCCCTCACGCCTTCACCATGACGGTGCCATGCGTCCTCGAGGAGGAGTTGCTTTCCAAGCTGCAGGTCATTGCAGATGCCCTGCCGCCACCTCCAGCTCAGGCGGAGGAGAACCACCTTGGAGAGTGCAACCGTGCACTGGTGTTCGACGACTCCCCCGGGAAATCGGACCTGTCCAATGC-TGCCTCGGTGCTCTCGTCGTCGTCCCTCTCGTTCCAGGACAGCAGCAGCACCGACAGATCACCGGACGACGACAGCTCATC-GGCTTGGTCAATCCAGGTCAATGCCAGCTCCGAGAAGGGCGACGAGGACACGTTCACTGATCAAGACCCAGAGGAGGAGGAGGAGGAGTGGCTAACAGAAGATGATGATGATGATGAGTGCTTTGATGATCTGTGTGA-GGGGA-TGAGCA-AGATGTCTGTG-TTTGACGATGAGGAGG-AGG-AGGACAAG-AAGGCTGGGCTGCCTG-CGTTTCAGGGG-AAGCA-CACCAGGTTCATCTACGACAGCGACGGCGAGATGGAGA-GGGAGGACGTGGCGCATGTG-CCGGTGGAGAAC-TGCACCATGGTTCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGCTTCCACGAGG-TGGAGGAGGATGAGGAATAGAATGACATTGCTACCAGTGATACAC-TTCGCAT--CCAAGCAACAAAAACAACA-TTGCTACTATAGTAGCTTCTTCTTTTT-CTTTTC-ATCTGGACAGACACATTGATTCAGTCTACTGCAATATAATGCCTTCTGTGTTTCGCTTCATGTTTCAGTTCTTCTGAATGCCTTTTGAATGTTACAACTGAATAATGCAATGCAATGCAAATATGCAATGTTCCAAAAAAAAAA]

[+] EMBL AK122076             [GTCCGTCTCTCTCTCTCTCTCTTCTTCTCTTGTCAGTCTCGCGCCTCCTCCTCCTCCTCATACGCAGCAGCAAGCAGCCAAGCATGGAGACGCCCCTCTCCAGCAGGAGGATCACCCGCTCCATGGCCAAGGCCTCCGCCGCCGCCCCCGACGCCACGTCCACGGCCCACCCGCCGCGCCCCGCCCTGCACGACATCACCAACGACTCCCCCATCGTCGGCCTCGCCTCCTCGGGCCTCCGCACGCCGGCCTCCACCGCCGCCAAGGCCCGCCCCACCAGGGCCTCCCGCCGCACCCCCGGATCCGGCGAGGCACTCCTCCGCGGCCAGGTCAAGACGCTCCTCCAGAAGGTCCACCACGACGCCTCCTCCTCCTCCTCCTGCGCCGCAGCCGCTCCTCCCTCCCCCAACATCCTCCGCATCCACGCGCCCATCGGTCTCGCCAGGTCGCCCGCCCACCTCCTCGCCCCCACGCCGGCCAACACGCCGCACCTCACCGCCGCCGCCCCTCACGCCTTCACCATGACGGTGCCATGCGTCCTCGAGGAGGAGTTGCTTTCCAAGCTGCAGGTCATTGCAGATGCCCTGCCGCCACCTCCAGCTCAGGCGGAGGAGAACCACCTTGGAGAGTGCAACCGTGCACTGGTGTTCGACGACTCCCCCGGGAAATCGGACCTGTCCAATGC TGCCTCGGTGCTCTCGTCGTCGTCCCTCTCGTTCCAGGACAGCAGCAGCACCGACAGATCACCGGACGACGACAGCTCATC GGCTTGGTCAATCCAGGTCAATGCCAGCTCCGAGAAGGGCGACGAGGACACGTTCACTGATCAAGACCCAGAGGAGGAGGAGGAGGAGTGGCTAACAGAAGATGATGATGATGATGAGTGCTTTGATGATCTGTGTGA GGGGA TGAGCA AGATGTCTGTG TTTGACGATGAGGAGG AGG AGGACAAG AAGGCTGGGCTGCCTG CGTTTCAGGGG AAGCA CACCAGGTTCATCTACGACAGCGACGGCGAGATGGAGA GGGAGGACGTGGCGCATGTG CCGGTGGAGAAC TGCACCATGGTTCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGCTTCCACGAGG TGGAGGAGGATGAGGAATAGAATGACATTGCTACCAGTGATACAC TTCGCAT  CCAAGCAACAAAAACAACA TTGCTACTATAGTAGCTTCTTCTTTTT CTTTTC ATCTGGACAGACACATTGATTCAGTCTACTGCAATATAATGCCTTCTGTGTTTCGCTTCATGTTTCAGTTCTTCTGAATGCCTTTTGAATGTTACAACTGAATAATGCAATGCAATGCAAATATGCA                 ]
[+] EMBL AK064295             [ TCCGTCTCTCTCTCTCTCTCTTCTTCTCTTGTCAGTCTCGCGCCTCCTCCTCCTCCTCATACGCAGCAGCAAGCAGCCAAGCATGGAGACGCCCCTCTCCAGCAGGAGGATCACCCGCTCCATGGCCAAGGCCTCCGCCGCCGCCCCCGACGCCACGTCCACGGCCCACCCGCCGCGCCCCGCCCTGCACGACATCACCAACGACTCCCCCATCGTCGGCCTCGCCTCCTCGGGCCTCCGCACGCCGGCCTCCACCGCCGCCAAGGCCCGCCCCACCAGGGCCTCCCGCCGCACCCCCGGATCCGGCGAGGCACTCCTCCGCGGCCAGGTCAAGACGCTCCTCCAGAAGGTCCACCACGACGCCTCCTCCTCCTCCTCCTGCGCCGCAGCCGCTCCTCCCTCCCCCAACATCCTCCGCATCCACGCGCCCATCGGTCTCGCCAGGTCGCCCGCCCACCTCCTCGCCCCCACGCCGGCCAACACGCCGCACCTCACCGCCGCCGCCCCTCACGCCTTCACCATGACGGTGCCATGCGTCCTCGAGGAGGAGTTGCTTTCCAAGCTGCAGGTCATTGCAGATGCCCTGCCGCCACCTCCAGCTCAGGCGGAGGAGAACCACCTTGGAGAGTGCAACCGTGCACTGGTGTTCGACGACTCCCCCGGGAAATCGGACCTGTCCAATGC TGCCTCGGTGCTCTCGTCGTCGTCCCTCTCGTTCCAGGACAGCAGCAGCACCGACAGATCACCGGACGACGACAGCTCATC GGCTTGGTCAATCCAGGTCAATGCCAGCTCCGAGAAGGGCGACGAGGACACGTTCACTGATCAAGACCCAGAGGAGGAGGAGGAGGAGTGGCTAACAGAAGATGATGATGATGATGAGTGCTTTGATGATCTGTGTGA GGGGA TGAGCA AGATGTCTGTG TTTGACGATGAGGAGG AGG AGGACAAG AAGGCTGGGCTGCCTG CGTTTCAGGGG AAGCA CACCAGGTTCATCTACGACAGCGACGGCGAGATGGAGA GGGAGGACGTGGCGCATGTG CCGGTGGAGAAC TGCACCATGGTTCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGCTCCCACGAGG TGGAGGAGGATGAGGAATAGAATGACATTGCTACCAGTGATACAC TTCGCAT  CCAAGCAACAAAAACAACA TTGCTACTATAGTAGCTTCTTCTTTTT CTTTTC ATCTGGACAGACACATTGATTCAGTCTACTGCAATATAATGCCTTCTGTGTTTCGCTTCATGTTTCAGTTCTTCTGAATGCCTTTTGAATGTTACAACTGAATAATGCAATGCAATGCAAATATGCAATGTTC           ]
[+] EMBL C27808               [                                                                                                                                                                                                                                                                                                                                                                            tnCCTCCTCCTCCTCCTGCGCCG  NCCGCTCCTCCCTCCCCCAACATCCTCCGCATCCACGCGCCCATCGGTCTCGCCAGGTCGCCCGCCCACCTCCTCGCCCCCACGCCGGCCAACACGCCGCACCTCACCGCCGCCGCCCCTCACGCCTTCACCATGACGGTGCCATGCGTCCTCGAGGAGGAGTTGCTTTCCAAGCTGCAGGTCATTGCAGATGCCCTGCCGCCACCTCCAGCTCAGGCGGAGGAGAACCACCTTGGAGAGTGCAACCGTGCATTGGTGTTCGACGACTTCCCCNGGAAATCGGACCTGTCCAATGCTTGCCTCGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU100877             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGTGCTCTNGTCGTCGTCCCTCTCGTTCCAGGNCAGCAGCAGCACCGACAG TCACCGGACGACGACAGCTCATCGGGTTTGGTCAATCCAGGTCAATGCCAGCTCCGAGAAGGGCGACGAGGACACGTTCACTGATCAAGACCCAGAGGAGGAGGAGNAGGAGTGGCTAACAGAAGATGATGATGATGATGAGTGCTTTGATGATCTGTGTGA GGGGA TGAGCA AGATGTCTGTG TTTGACGATGAGGAGG AGG AGGACAAG AAGGCTGGGCTGCCTG CGTTTCAGGGG AAGCA CACCAGGTTCATCTACGACAGCGACGGCGAGATGGAGA GGGAGGACGTGGCGCATGTG CCGGTGGAGAAC TGCACCATGGTTCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGCTTCCACGAGG TGGAGGAGGATGAGGAATAGAATGACATTGCTACCAGTGATACAC TTCGCAT  CCAAGCAACAAAAACAACA TTGCTACTATAGTAGCTTCTTCTTTTT CTTTTC ATCTGGACAGACACATTGATTCAGTCTACTGCAATATAATGCCTTCTGTGTTTCGCTTCAaaaaa                                                                               ]
[+] EMBL BI804957             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GACACG TCACTGATCAAGACCCAGA GAGGAGGAGGAGGAGTGGCTAACAGAAGATGATGATGATGATGAGTGCTTTGATGATCTGTGTGA GGGGA TGA CACAGATGTCTGTG TTTGACGATGAGGAGG AGG AGGACCAG AAGGCT GGCTGCCTG CGTTTCAGGGG AAGCA CACCAGGTTCATCTACGACAGCGACGGCGAGATGGAGA GGGAGGACGTGGCGCATGTG CCGGTGGAGAAC TGCACCATGGTTCTGAGGGGCCTGCC GTGCCGGAGGGGAAGCATCTCCGCTTCCACGAGG TGGAGGAGGATGAGGAATAGAATGACATTGCTACCAGTGATACAC TTCGCAT  CCAAGCAACCAAAACAACA TTGCTACTATAGTAGCTTCTTCTTTTT CTTTTC ATCTGGACAGACACATTGATTCAGTCTACTGCAATATAATGCCTTCTGTGTTTCGCTTCATGTTTCAGTTCTTCTGAATGCCTTTTGAATGTTACAACTGAATAATGC ATGCAATGCAAATATGC ATGTTCCAAAAAAAAAA]
[+] EMBL AU029910             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGGCTAACAGAAGATGATGATGATGATGAGTGCTTTGATGATCTGTGTGA GGGGA TGAGCA AGATGTCTGTG TTTGACGATGAGGAGG AGG AGGACAAG AAGGCTGGGCTGCCTG CGTTTCAGGGG AAGCA CACCAGGTTCATCTACGACAGCGACGGCGAGATGGAGA GGGAGGACGTGGCGCATGTG CCGGTGGAGAACTTGCACCATGGTTCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGCTTCCACGAGGTTGGAGGAGGATGAGG ATAG ATTACATTGCTACCAGTGATACACTTTCGCATTCCCAAGCAAC AAAAC ACATTTGCTACTATAGTACCTCCTCCTTTTTCCTTTTCAATCTGGACAG C CNTTTATTCAG                                                                                                                        ]
[+] EMBL AU029911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCTAACAGAAGATGATGATGATGATGAGTGCTTTGATGATCTGTGTGAGGGGGATTGAGCA AGATGTCTGTGTTTTGACGATGAGGAGGAAGGAAGGACAAGAAAGGCTGGGCTGCCTGCCGTTTCAGGGGAAAGCACCACCAGGTTCATCTACGACAGCGACGGCGAGATGGAGAGGGGAGGACGTGGCGCATGTGCCCGGTGGAGAAC TGCACCATGGTTCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGCTTCCACGAGG TGGAGGAGGATGAGGAATAGAATGACATTGCTACCAGTGATACAC TTCGCAT  CCAAGCAACAAAAACAACA TTGCTACTATAGTAGCTTCTTCTTTTT CTTTTC ATCTGGACAGACACATTGATTCAGTCTACTGCAATATAATGCCTTCTGTGTTTCGCTTCAaaaaa                                                                               ]




>consensus_10294#0
GTCCGTCTCTCTCTCTCTCTCTTCTTCTCTTGTCAGTCTCGCGCCTCCTCCTCCTCCTCA
TACGCAGCAGCAAGCAGCCAAGCATGGAGACGCCCCTCTCCAGCAGGAGGATCACCCGCT
CCATGGCCAAGGCCTCCGCCGCCGCCCCCGACGCCACGTCCACGGCCCACCCGCCGCGCC
CCGCCCTGCACGACATCACCAACGACTCCCCCATCGTCGGCCTCGCCTCCTCGGGCCTCC
GCACGCCGGCCTCCACCGCCGCCAAGGCCCGCCCCACCAGGGCCTCCCGCCGCACCCCCG
GATCCGGCGAGGCACTCCTCCGCGGCCAGGTCAAGACGCTCCTCCAGAAGGTCCACCACG
ACGCCTCCTCCTCCTCCTCCTGCGCCGCAGCCGCTCCTCCCTCCCCCAACATCCTCCGCA
TCCACGCGCCCATCGGTCTCGCCAGGTCGCCCGCCCACCTCCTCGCCCCCACGCCGGCCA
ACACGCCGCACCTCACCGCCGCCGCCCCTCACGCCTTCACCATGACGGTGCCATGCGTCC
TCGAGGAGGAGTTGCTTTCCAAGCTGCAGGTCATTGCAGATGCCCTGCCGCCACCTCCAG
CTCAGGCGGAGGAGAACCACCTTGGAGAGTGCAACCGTGCACTGGTGTTCGACGACTCCC
CCGGGAAATCGGACCTGTCCAATGCTGCCTCGGTGCTCTCGTCGTCGTCCCTCTCGTTCC
AGGACAGCAGCAGCACCGACAGATCACCGGACGACGACAGCTCATCGGCTTGGTCAATCC
AGGTCAATGCCAGCTCCGAGAAGGGCGACGAGGACACGTTCACTGATCAAGACCCAGAGG
AGGAGGAGGAGGAGTGGCTAACAGAAGATGATGATGATGATGAGTGCTTTGATGATCTGT
GTGAGGGGATGAGCAAGATGTCTGTGTTTGACGATGAGGAGGAGGAGGACAAGAAGGCTG
GGCTGCCTGCGTTTCAGGGGAAGCACACCAGGTTCATCTACGACAGCGACGGCGAGATGG
AGAGGGAGGACGTGGCGCATGTGCCGGTGGAGAACTGCACCATGGTTCTGAGGGGCCTGC
CGGTGCCGGAGGGGAAGCATCTCCGCTTCCACGAGGTGGAGGAGGATGAGGAATAGAATG
ACATTGCTACCAGTGATACACTTCGCATCCAAGCAACAAAAACAACATTGCTACTATAGT
AGCTTCTTCTTTTTCTTTTCATCTGGACAGACACATTGATTCAGTCTACTGCAATATAAT
GCCTTCTGTGTTTCGCTTCATGTTTCAGTTCTTCTGAATGCCTTTTGAATGTTACAACTG
AATAATGCAATGCAATGCAAATATGCAATGTTCCAAAAAAAAAA
clustalw multiple alignements is not computed in this case