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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10329#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1911 fasta sequence
[GATGCATCCAGCAGTGAAGATGAAGCTCAAAACCCTCAAATTATTCTTAGTAAAGAGGATGTTTACAAGGCAAATCACAAGGGCACTGCTGCTACTAAGAAAAAGAAGAAAGCTAAATTGCAGCGTGTGATTCGTAGTATGAAAAGGCAACAACGTAAATCCACTGAGGACACTGGCTCCAATTATTATTCACCACTGGCGTATTTAAAGGATCCTCAGGGTTTTGCTGAGAAGCTCTTCTCTCGGCTCCAGAAATGCAATGAGCGGTTTGAGGTAAGGATGATGATGTTAAAGGTTATAGCGAGGACTATTGGGCTGCATCACTTGGTTTTGTTGAACTTCTATCCATATCTTCAAAGATACGTTCAGCCTCATCAACGAGATGTAACAACTTTACTTGCTGCAGCAGTACAGGCTTGCCATGATATGGTGCCTCCTGATGCAGTTGAACCACTGTTTAAGCAGATAGTAAATCAATTTGTGCATGATCGTTCTCGCCCAGAGGCTATTGCTGTTGGCTTGAATGTTGTGCGAGAGATCTGCATGAGAATACCTTTGTTGATGAATGAAGATCTACTCCAGGACCTTGTTTTATACAAAAAGTCCCATGAAAAAGCTGTTTCCATTGCCGCTCGTTCTCTAATTACTTTATTCCGGGAGATCTGTCCTTCTCTGCTAGTCAAGAAAGATCGTGGGCGTCCTGCTGATCCGAAGGCTCGACCAAAAGCATTCGGCGAAGCAACTATCGCTTCTGATGTGCCTGGAGCTGAGTTGCTAGATGAAGATTTTTCATCAGAAGGGGAAGGCTCAGACGATGAGTCTGATGCTTTTGATTCTAATGATGAGAAAGAGTTGCAATCTGCTCGTGGTACTAAACAAAATTTGGATGGTTCGTCTGAAGCAAACAAGCTTGACACAGATGAAGGTATGAAAGAGGAAGATCAACTATCTGGGGATGAAGATGATACAGAGGAACTAGATGAGGATCAAGACATCTCTGACAATGATAGTGAAGAAAATGATGATGAGCTAGAATTGGACTCTGATATGGATGAGGAGAATGATGTATCTGAATCTGATGATGATGAGGAACTCAGTGAGAAATTGGATGATTCTGATGAAGGCTCTGATCAGGATGATGACAGTGACCAGGATGATAAGTCAAAAAACAGCAGTCGCAAGGCAAATAAGAGAAAGTTGAGTGATTATATAGGGCAACTTAATGCTGCAGATGCAAGCCTTCGAGCTCTGAAGAAGTTGGCAGGAGCCAAGAAGGCTGAAGCTTCGTGCGATGAAGCTGGTAAAATCTTATCTGATGAAGATTTTAAGCGTATTAAGGAGCTAAAGGCAAAAAAAGAAGCAAAACTGGCTCTGGCACAACATGGACTCGGCAAGGGCCATGACACAAAATCA-GTAACCTTTAAAATGCCTTCTTCTGATCAGCTTAGTCTGAAACGGGTTGACCCATCCAAGCTTGAGGCTCACATAAAGAGAAAGCTTACGAAAGAGGAGAGATTAGAAATGGTGAAGGCTGGAAGAGAGGATAGAGGAAAATACCAAGCAAGAACAGCTGTGAAACAGAAAAAGACCGGTGGCTTGAGCAATAGGCAGAAACAACACAAGAAGAAAATGCCCCTCGCTGCAAGCAGAGCGAAGGCAGCGCGTTCTCGACAGGAGAAGAAAAAACTGCAAAAGCGCTCGGGAAAGCAATTCAGAGGACGGAAGGCGTGGAAATGAGGGATTTTTTGTACTTGCGTTTGCCAATTCTTGTGGTCTACTGGCCAAAATTTTGACTCCTTCAGTTAATGATTTTCGTATACAAATATGGTTTCACA-ACCGTGTATCATCGATTTTTCAAGTCTGGTGATCTTTTGTGAGTGGAGAGAATGAACCGGTATATCATCGCTCAAA]
[+] EMBL AK060199 [GATGCATCCAGCAGTGAAGATGAAGCTCAAAACCCTCAAATTATTCTTAGTAAAGAGGATGTTTACAAGGCAAATCACAAGGGCACTGCTGCTACTAAGAAAAAGAAGAAAGCTAAATTGCAGCGTGTGATTCGTAGTATGAAAAGGCAACAACGTAAATCCACTGAGGACACTGGCTCCAATTATTATTCACCACTGGCGTATTTAAAGGATCCTCAGGGTTTTGCTGAGAAGCTCTTCTCTCGGCTCCAGAAATGCAATGAGCGGTTTGAGGTAAGGATGATGATGTTAAAGGTTATAGCGAGGACTATTGGGCTGCATCACTTGGTTTTGTTGAACTTCTATCCATATCTTCAAAGATACGTTCAGCCTCATCAACGAGATGTAACAACTTTACTTGCTGCAGCAGTACAGGCTTGCCATGATATGGTGCCTCCTGATGCAGTTGAACCACTGTTTAAGCAGATAGTAAATCAATTTGTGCATGATCGTTCTCGCCCAGAGGCTATTGCTGTTGGCTTGAATGTTGTGCGAGAGATCTGCATGAGAATACCTTTGTTGATGAATGAAGATCTACTCCAGGACCTTGTTTTATACTAAAAGTCCCATGAAAAAGCTGTTTCCATTGCCGCTCGTTCTCTAATTACTTTATTCCGGGAGATCTGTCCTTCTCTGCTAGTCAAGAAAGATCGTGGGCGTCCTGCTGATCCGAAGGCTCGACCAAAAGCATTCGGCGAAGCAACTATCGCTTCTGATGTGCCTGGAGCTGAGTTGCTAGATGAAGATTTTTCATCAGAAGGGGAAGGCTCAGACGATGAGTCTGATGCTTTTGATTCTAATGATGAGAAAGAGTTGCAATCTGCTCGTGGTACTAAACAAAATTTGGATGGTTCGTCTGAAGCAAACAAGCTTGACACAGATGAAGGTATGAAAGAGGAAGATCAACTATCTGGGGATGAAGATGATACAGAGGAACTAGATGAGGATCAAGACATCTCTGACAATGATAGTGAAGAAAATGATGATGAGCTAGAATTGGACTCTGATATGGATGAGGAGAATGATGTATCTGAATCTGATGATGATGAGGAACTCAGTGAGAAATTGGATGATTCTGATGAAGGCTCTGATCAGGATGATGACAGTGACCAGGATGATAAGTCAAAAAACAGCAGTCGCAAGGCAAATAAGAGAAAGTTGAGTGATTATATAGGGCAACTTAATGCTGCAGATGCAAGCCTTCGAGCTCTGAAGAAGTTGGCAGGAGCCAAGAAGGCTGAAGCTTCGTGCGATGAAGCTGGTAAAATCTTATCTGATGAAGATTTTAAGCGTATTAAGGAGCTAAAGGCAAAAAAAGAAGCAAAACTGGCTCTGGCACAACATGGACTCGGCAAGGGCCATGACACAAAATCA GTAACCTTTAAAATGCCTTCTTCTGATCAGCTTAGTCTGAAACGGGTTGACCCATCCAAGCTTGAGGCTCACATAAAGAGATAGCTTACGAAAGAGGAGAGATTAGAAATGGTGAAGGCTGGAAGAGAGGATAGAGGAAAATACCAAGCAAGAACAGCTGTGAAACAGAAAAAGACCGGTGGCTTGAGCAATAGGCAGAAACAACACAAGAAGAAAATGCCCCTCGCTGCAAGCAGAGCGAAGGCAGCGCGTTCTCGACAGGAGAAGAAAAAACTGCAAAAGCGCTCGGGAAAGCAATTCAGAGGACGGAAGGCGTGGAAATGAGGGATTTTTTGTACTTGCGTTTGCCAATTCTTGTGGTCTACTGGCCAAAATTTTGACTCCTTCAGTTAATGATTTTCGTATACAAAT ]
[+] EMBL CF322660 [ AAGATCTACTCCAGGACCTTGTTTTATACAAAAAGTCCCATGAAAAAGCTGTTTCCATTGCCGCTCGTTCTCTAATTACTTTATTCCGGGAGATCTGTCCTTCTCTGCTAGTCAAGAAAGATCGTGGGCGTCCTGCTGATCCGAAGGCTCGACCAAAAGCATTCGGCGAAGCAACTATCGCTTCTGATGTGCCTGGAGCTGAGTTGCTAGATGAAGATTTTTCATCAGAAGGGGAAGGCTCAGACGATGAGTCTGATGCTTTTGATTCTAATGATGAGAAAGAGTTGCTATCTGCTCGTGGTACTAAACAAAATTTGGATGGTTCGTCTGAAGCAAACAAGCTTGACACAGATGAAGGTATGAAAGAGGAAGATCAACTATCTGGGGATGAAGATGATACAGAGGAACTAGATGAGGATCAAGACATCTCTGACAATGATAGTGAAGAAAATGATGATGAGCTAGAATTGGACTCTGATATGGATGAGGAGAATGATGTATCTGAATCTGATGATGATGAGGAACTCAGTGAGAAATTGGAT ]
[+] EMBL OSC28031 [ CAGGACCTTGTTTTATACAAAAAGTCCCATGAAAAAGCTGTTTCCATTGCCGCTCGTTCTCTAATTACTTTATTCCGGGAGATCTGTCCTTCTCTGCTAGTCAAGAAAGATCGTGGGCGTCCTGCTGATCCGAAGGCTCGACCAAAAGCATTCGGCGAAG AACTATCGCTTCTGATGTGCCTGGAGCTGAGTTGCTAGATGAAGATTTTTCATCAGAAGGGGAAGGCTCAGACGATGAGTCTGATGCTTTTGATTCTAATGATGAGAAAGAGTTGCAATCTGCTCGTGGTACTAAACAAAATTTGGATGGTTCGTCTTGAGCAAACAAGCTTGACACAG ]
[+] EMBL CF306974 [ CCCATGAAAAAGCTGTTTCCATTGCCGCTCGTTCTCTAATTACTTTATTCCGGGAGATCTGTCCTTCTCTGCTAGTCAAGAAAGATCGTGGGCGTCCTGCTGATCCGAAGGCTCGACCAAAAGCATTCGGCGAAGCAACTATCGCTTCTGATGTGCCTGGAGCTGAGTTGCTAGATGAAGATTTTTCATCAGAAGGGGAAGGCTCAGACGATGAGTCTGATGCTTTTGATTCTAATGATGAGAAAGAGTTGCAATCTGCTCGTGGTACTAAACAAAATTTGGATGGTTCGTCTGAAGCAAACAAGCTTGACACAGATGAAGGTATGAAAGAGGAAGATCAACTATCTGGGGATGAAGATGATACAGAGGAACTAGATGAGGATCAAGACATCTCTGACAATGATAGTGAAGAAAATGATGATGAGCTAGAATTGGACTCTGATATGGATGAGGAGAATGATGTATCTGAATCTGATGATGATGAGGA ]
[+] EMBL BI797418 [ TGGCTCTGGCACAACATGGACTCTGCAA GGCCATGACAC AAATCACGTAACCTTTAAAATGCCTTCTTCTGATCAGCTTAGTCTGAAACGGGTTGACCCATCCAAGCTTGAGGCTCACATAAAGAGAAAGCTTACGAAAGAGGAGAGATTAGAAATGGTGAAGGCTGGAAGAGAGGATAGAGGAAAATACCAAGCAAGAACAGCTGTGAAACAGAAAAAGACCGGTGGCTTGAGC ATAGGCAGAAAC ACACAAGAAGAAAATGCCCCTCGCTGCAAGCAGAGCGAA GCAGCGCGTTCTCGACAGGAGAAGAAAAAACTGCAAAAGCGCTCGGGAAAGCAATTCAGAGGACGGAAGGCGTGGAAATGAGGGATTTTTTGTACTTGCGTTTCCCAATTCTTGTGGTCTACTGGCCAAAATTTTGACTCCTTCAGTTAATGATTTTCGTATACAAATATGGTTTCACACACCGTGTATCATCGATTTTTCAAGTCTGGTGATCTTTTGTGAGTGGAGAGAATGAACCGGTATATCATCGCTCAAA]
[+] EMBL BI795850 [ TGATCAGCTTAGTCTGAAACGGGTTGACCCATCCAAGCTTGAGGCTCACATAAAGAGAAAGCTTACGAAAGAGGAGAGATTAGAAATGGTGAAGGCTGGAAGAGAGGATAGAGGAAAATACCAAGCAAGAACAGCTGTGAAACAGAAAAAGACCGGTGGCTTGAGC ATAGGCAGAAACAACACAAGAAGAAAATGCCCCTCGCTGCAAGCAGAGCGAAGGCAGCGCGTTCTCGACAGGAGAAGAAAAAACTGC AAAGCGCTCGGGAAAGC ATTCAGAGGACGGAAGGCGTGGAAATGAGGGATTTTTTGTACTTGCGTTTGCC ATTCTTGTGGTCTACTGGCC AAATTTTGACTCCTTCAGTTAATGATTTTCGTATACAAAaa ]
[+] EMBL C74695 [ ACCAAGCAAGAACAGCTGTGAAACAGAAAAAGATCGGTGGCTTGAGCAATAGGCAGAAACAACACAAGAAGAAAATGCCCCTCGCTGCAA CAGAGCGAAGGCAGCGCGTTCTCGACAGGAGAAGAAAAAACTGCAAAAGCGCTCGGGAAAGCAATTCAGAGGACGGAAGGCGTGGAAATGAGGGATTTTTTGTACTTGCGTTTGCCAATTCTTGTGGTCTACTGGCCAAAATTTTGACTCCTTCAGTTAATGATTTTCGTATACCAATATGGTTTCACA ACCGTGTATCATCnt ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||