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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10336#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3644 fasta sequence
[AAACCCGATAAACTGTAGTATTTATTGTTTTGAATAAAAAGATACTAATAATGAAAGATTCAGAAATCGGAACAACAGATTAGATTGGTTGAGATTATTATTCTTGCGTGACAAGTTCCAGGAGTCTGAGAGAAAAGGTTTGCTCTCTTTCCTCTGGCTCTGAAGGAGGATTGGATTCTCCCGCAAGCCACGGAACATCCCCAATCCCCACCCACCCCACCCGTGCGCCGCCGCTGCCGCGTCTCCGGGAGGGAGGGACACGGGATCGCATCGCATCGCATCTTTCTTCTTCTTCGTTGTTGTTGCTCCTCCTCCTCACGCCGCTCCTCCTCTGCTCTCCATGTCTCCTTGGAACCTAGTACTACTAGCTAGGTACTACTCCTAGTAGAAAGGACGAGGAAGAGGCAGAAGAGGGGTTGCCGAACGCCGCCGCCGTCCAGCTGGGTCTCCCGCCGTGCGATTGCTGGGTGGCGCGGCTGGCGTTGGAGCCGAGAGCGCGCCGCCGCCGGCTGGAACGACCAAAGAGGCCCCTTCGGTCGTTCCTCCGTCTCCGGTACCCGATTCGAGGTATGCCAGTGAGGGGCCATATGGAGTTCAGTGGAGGCTAGAAGTTCGCACTGACATTATCAAAAGTTCTAGCTTGATTTATTAACCAACTAACCATTCATGTTGAGGGCAAAGCAACTCGGCACGCTAACCCAGTGTGCACGGTCCTTCTACGTTAATGGGTCAAGGTGTGGTAGCACTGATGGAGCTTCATGCACATGCCCTGAAGATGAAACTTCTGCTCCAAAAAGGCAGACGGCTAATGGTATCGAGCAGAAGTTTCATTCAACTCGCAGACCCTCTGTAAAGGCTCAAACTCCATCTGTACAACATGTTGTTGGATCCATTGGTCGGGCCACTGGTTACCCTGCTCCAGCTGTTCATATTGTTCCTTCCAACTCATCTCAAGAGACAGAGCCAGCATCTGGCAACACTAGCAACCACCCTCGAACTCCTCAGGTGCTAGGAAATGATTATGTACAGCCTTCTAAGCGGACCGCCAGAAGCATTTCTCATTCTGCAATTGCAGGAGCTGGTGTGTACACTGAGTTAGTAAACCTCAAGTCCACATCAAATAATGGAGGCACCAATCAAGCTTCACAGATGGCCTCTAGCTATTCTTACCAGCCCTTGTCGGATGCCCAGCCTTCTAATATCAAGTCACACAACCAGCATAGTCTTCCTGAGGCAAAGATGCCTTATAATCCTTCCGTGCAAAATAATCTTGGGAAGGGTGTATCAAGATCTGGCTATGCAAAATCAAACCAGAGTTTTTCAGGACCTCCTGCTATGGTTGCTAATTCACCATCGCAAATAAAGAATCAAAGACATCCTGGTCAGCGCCACACAAATTATCATTCTAACAATTTCAGTACAGATGCTAGGTGGGATGAAGTTCAAACCCAAAACTTGTCAGCTCCAGCTATGTATACTGGTTCTGGTCACAAATCTCAGGCCCTTGCGGGAACAATAAAGAGTCATGGTGGAGGACCTCAGTCTAACTTAAGATCATTGAAGTCATTGCGCTCAGTTGAACAGTACTACCATACACTGCAGCAAATGAAATGGGGTCCTATGACGGAACACGTTCTGGATAATCTCCATTGCAAGATAGATGCATTCCAGGCAAACCAAGTACTCAAGCTGCTTCATGACCACACCATTGCACTTGGTTTCTTCCAGTGGTTAAAGCGGCAACCAGGTTTCAAGCATGATGGTCATAGCTACACAACCATGATAGGCATCCTTGGACAAGCCAGGCAATTTGGTACGATGAGGAAACTTCTTGATGAGATGAACAGTGTTCACTGCAAACCAACTGTTGTAACATACAACAGAATAATACATGCATATGGTCGTGCAAATTATCTAAGAGAGGCTGTTAAAGTATTCGAGGAGATGCAGAAAGCCGGTTATGAGCCAGATCGGGTTACATATTGTACATTGATTGATATCCATGCTAAAGGTGGATACCTGGAATTTGCAATGGATTTATATACCAGGATGCAAGAAGTAGGGCTGTCACCAGATACTTTCACGTACAGTGCCATGGTTAATTGCCTTGGAAAAGGTGGTCACCTGGCAGCTGCTTATAAGCTTTTCTGTGAGATGGTTGAAAATGGCTGCACACCTAACCTAGTTACATACAACATAATGATTGCTCTTCAGGCCAAAGCAAGAAATTATGAAAATGTTGTGAAGCTGTACAAGGACATGCAGGTTGCCGGGTTTCGTCCTGACAAAATAACATACAGTATTGTCATGGAAGTTCTTGGTCATTGTGGTCATCTGGATGAGGCTGAGGCTGTGTTCATTGAGATGAGGCATGACTGGGCTCCTGATGAGCCTGTATATGGTCTTTTGGTGGACCTCTGGGGCAAAGCTGGCAATGTTGACAAGGCACTAGGATGGTATCATGCAATGCTTCAGGATGGTTTGCAGCCCAATGTGCCGACCTGCAATTCCCTACTGAGTGCTTTTCTTAAGATAAACAGGTTCCAAGATGCCTACAGCGTGCTCCAAAACATGCTTGCTCAGGGGCTCGTTCCATCTTTGCAGACCTACACCTTGCTGCTCAGTTGTTGTACTGAGGCTCAAGCACAGATGGGTTTATGCTGCCAGCTCATGGCGATCACTGGACACCCTGCCCACATGTTCTTGTTATATTTGCCCGATGCAGAACCTGGCGGCCAGAATGTGAGGGATCACACCAGATATTTCTTGGACATGATGCACAGTGAGGACAGAGAGAGTAAAAGGGGTTTAATGGATGCTGTCATAGATTTCCTACACAAGTCCGGCCTC-AAGGAGGA-GGC-TGGCTTCATATGGGAGGTTGCTGCCCAGAGGAATGTGTACCCGGATTCTGTGAGGGAGAAGGACCCATCATATTGGCTCATCAACTTACACCTGATGTCGGAGGGCACTGCAGTGACTGCGCTGTCAAGGACACTGGCTTGGTTCCACAGGCAGATTCTGACAATGGGCAAATGCCCTGAAAGAATTGACATTGTCACTGGCTGGGGCAGGAGGAGCAGGGTAACCGGGTCTTCCTTGGTTAGACAGTCAGTT-CAGAAGCTGCTACATCTCTTCGAATTCCCGTTCGTCA-CCACGCGAGGCAATACTGGATGCTTCGTTGGATGTGGGGAGCCACTGAATAGGTGGCTGCACAATCCTTATGTTGAGCGCATGCATCTGCTCTAGAGACTCTAGTGACTAGTGAGGTTATTCCAGTCAGAAATAAGGGACTCATCTAAACAGGGTGCAGTTTTGGGGGAAGAATGATGATCTGGTGCATCTGTCTAGATTGGTCTGTAGTCTAAGTTGTAGTTCTCTTTGATTCCTTATGCTTTGAAACCTCTTATTTGTGATAACATTTAGAGATGGCATTGGTGCATTTTAAGTGAGATTATCCTGTTTTAATTGATAGCCAATTAGAATCATTTCGTGTTCCAGCACGTCCATTGCTGTTCCAACCTTTTTTGGGAGCTTGAATGACTCGTTAGCTGCTACTGCCAACAGATAACCTTGAGTGTAACTTTATATCTGATTTTATGTTAGAGAAATGACAACTAGATTTGCTCAAAAAAAAAAAAAAAAAA]
[-] EMBL AK111016 [AAACCCGATAAACTGTAGTATTTATTGTTTTGAATAAAAAGATACTAATAATGAAAGATTCAGAAATCGGAACAACAGATTAGATTGGTTGAGATTATTATTCTTGCGTGACAAGTTCCAGGAGTCTGAGAGAAAAGGTTTGCTCTCTTTCCTCTGGCTCTGAAGGAGGATTGGATTCTCCCGCAAGCCACGGAACATCCCCAATCCCCACCCACCCCACCCGTGCGCCGCCGCTGCCGCGTCTCCGGGAGGGAGGGACACGGGATCGCATCGCATCGCATCTTTCTTCTTCTTCGTTGTTGTTGCTCCTCCTCCTCACGCCGCTCCTCCTCTGCTCTCCATGTCTCCTTGGAACCTAGTACTACTAGCTAGGTACTACTCCTAGTAGAAAGGACGAGGAAGAGGCAGAAGAGGGGTTGCCGAACGCCGCCGCCGTCCAGCTGGGTCTCCCGCCGTGCGATTGCTGGGTGGCGCGGCTGGCGTTGGAGCCGAGAGCGCGCCGCCGCCGGCTGGAACGACCAAAGAGGCCCCTTCGGTCGTTCCTCCGTCTCCGGTACCCGATTCGAGGTATGC ]
[+] EMBL AK073506 [ TGCTCCTCCTCCTCACGCCGCTCCTCCTCTGCTCTCCATGTCTCCTTGGAACCTAGTACTACTAGCTAGGTACTACTCCTAGTAGAAAGGACGAGGAAGAGGCAGAAGAGGGGTTGCCGAACGCCGCCGCCGTCCAGCTGGGTCTCCCGCCGTGCGATTGCTGGGTGGCGCGGCTGGCGTTGGAGCCGAGAGCGCGCCGCCGCCGGCTGGAACGACCAAAGAGGCCCCTTCGGTCGTTCCTCCGTCTCCGGTACCCGATTCGAGGTTTACCAGTGAGGGGCCATATGGAGTTCAGTGGAGGCTAGAAGTTCGCACTGACATTATCAAAAGTTCTAGCTTGATTTATTAACCAACTAACCATTCATGTTGAGGGCAAAGCAACTCGGCACGCTAACCCAGTGTGCACGGTCCTTCTACGTTAATGGGTCAAGGTGTGGTAGCACTGATGGAGCTTCATGCACATGCCCTGAAGATGAAACTTCTGCTCCAAAAAGGCAGACGGCTAATGGTATCGAGCAGAAGTTTCATTCAACTCGCAGACCCTCTGTAAAGGCTCAAACTCCATCTGTACAACATGTTGTTGGATCCATTGGTCGGGCCACTGGTTACCCTGCTCCAGCTGTTCATATTGTTCCTTCCAACTCATCTCAAGAGACAGAGCCAGCATCTGGCAACACTAGCAACCACCCTCGAACTCCTCAGGTGCTAGGAAATGATTATGTACAGCCTTCTAAGCGGACCGCCAGAAGCATTTCTCATTCTGCAATTGCAGGAGCTGGTGTGTACACTGAGTTAGTAAACCTCAAGTCCACATCAAATAATGGAGGCACCAATCAAGCTTCACAGATGGCCTCTAGCTATTCTTACCAGCCCTTGTCGGATGCCCAGCCTTCTAATATCAAGTCACACAACCAGCATAGTCTTCCTGAGGCAAAGATGCCTTATAATCCTTCCGTGCAAAATAATCTTGGGAAGGGTGTATCAAGATCTGGCTATGCAAAATCAAACCAGAGTTTTTCAGGACCTCCTGCTATGGTTGCTAATTCACCATCGCAAATAAAGAATCAAAGACATCCTGGTCAGCGCCACACAAATTATCATTCTAACAATTTCAGTACAGATGCTAGGTGGGATGAAGTTCAAACCCAAAACTTGTCAGCTCCAGCTATGTATACTGGTTCTGGTCACAAATCTCAGGCCCTTGCGGGAACAATAAAGAGTCATGGTGGAGGACCTCAGTCTAACTTAAGATCATTGAAGTCATTGCGCTCAGTTGAACAGTACTACCATACACTGCAGCAAATGAAATGGGGTCCTATGACGGAACACGTTCTGGATAATCTCCATTGCAAGATAGATGCATTCCAGGCAAACCAAGTACTCAAGCTGCTTCATGACCACACCATTGCACTTGGTTTCTTCCAGTGGTTAAAGCGGCAACCAGGTTTCAAGCATGATGGTCATAGCTACACAACCATGATAGGCATCCTTGGACAAGCCAGGCAATTTGGTACGATGAGGAAACTTCTTGATGAGATGAACAGTGTTCACTGCAAACCAACTGTTGTAACATACAACAGAATAATACATGCATATGGTCGTGCAAATTATCTAAGAGAGGCTGTTAAAGTATTCGAGGAGATGCAGAAAGCCGGTTATGAGCCAGATCGGGTTACATATTGTACATTGATTGATATCCATGCTAAAGGTGGATACCTGGAATTTGCAATGGATTTATATACCAGGATGCAAGAAGTAGGGCTGTCACCAGATACTTTCACGTACAGTGCCATGGTTAATTGCCTTGGAAAAGGTGGTCACCTGGCAGCTGCTTATAAGCTTTTCTGTGAGATGGTTGAAAATGGCTGCACACCTAACCTAGTTACATACAACATAATGATTGCTCTTCAGGCCAAAGCAAGAAATTATGAAAATGTTGTGAAGCTGTACAAGGACATGCAGGTTGCCGGGTTTCGTCCTGACAAAATAACATACAGTATTGTCATGGAAGTTCTTGGTCATTGTGGTCATCTGGATGAGGCTGAGGCTGTGTTCATTGAGATGAGGCATGACTGGGCTCCTGATGAGCCTGTATATGGTCTTTTGGTGGACCTCTGGGGCAAAGCTGGCAATGTTGACAAGGCACTAGGATGGTATCATGCAATGCTTCAGGATGGTTTGCAGCCCAATGTGCCGACCTGCAATTCCCTACTGAGTGCTTTTCTTAAGATAAACAGGTTCCAAGATGCCTACAGCGTGCTCCAAAACATGCTTGCTCAGGGGCTCGTTCCATCTTTGCAGACCTACACCTTGCTGCTCAGTTGTTGTACTGAGGCTCAAGCACAGATGGGTTTATGCTGCCAGCTCATGGCGATCACTGGACACCCTGCCCACATGTTCTTGTTATATTTGCCCGATGCAGAACCTGGCGGCCAGAATGTGAGGGATCACACCAGATATTTCTTGGACATGATGCACAGTGAGGACAGAGAGAGTAAAAGGGGTTTAATGGATGCTGTCATAGATTTCCTACACAAGTCCGGCCTC AAGGAGGA GGC TGGCTTCATATGGGAGGTTGCTGCCCAGAGGAATGTGTACCCGGATTCTGTGAGGGAGAAGGACCCATCATATTGGCTCATCAACTTACACCTGATGTCGGAGGGCACTGCAGTGACTGCGCTGTCAAGGACACTGGCTTGGTTCCACAGGCAGATTCTGACAATGGGCAAATGCCCTGAAAGAATTGACATTGTCACTGGCTGGGGCAGGAGGAGCAGGGTAACCGGGTCTTCCTTGGTTAGACAGTCAGTT CAGAAGCTGCTACATCTCTTCGAATTCCCGTTCGTCA CCACGCGAGGCAATACTGGATGCTTCGTTGGATGTGGGGAGCCACTGAATAGGTGGCTGCACAATCCTTATGTTGAGCGCATGCATCTGCTCTAGAGACTCTAGTGACTAGTGAGGTTATTCCAGTCAGAAATAAGGGACTCATCTAAACAGGGTGCAGTTTTGGGGGAAGAATGATGATCTGGTGCATCTGTCTAGATTGGTCTGTAGTCTAAGTTGTAGTTCTCTTTGATTCCTTATGCTTTGAAACCTCTTATTTGTGATAACATTTAGAGATGGCATTGGTGC ]
[+] EMBL AK104070 [ CAGTTGAACAGTACTACCATACACTGCAGCAAATGAAATGGGGTCCTATGACGGAACACGTTCTGGATAATCTCCATTGCAAGATAGATGCATTCCAGGCAAACCAAGTACTCAAGCTGCTTCATGACCACACCATTGCACTTGGTTTCTTCCAGTGGTTAAAGCGGCAACCAGGTTTCAAGCATGATGGTCATAGCTACACAACCATGATAGGCATCCTTGGACAAGCCAGGCAATTTGGTACGATGAGGAAACTTCTTGATGAGATGAACAGTGTTCACTGCAAACCAACTGTTGTAACATACAACAGAATAATACATGCATATGGTCGTGCAAATTATCTAAGAGAGGCTGTTAAAGTATTCGAGGAGATGCAGAAAGCCGGTTATGAGCCAGATCGGGTTACATATTGTACATTGATTGATATCCATGCTAAAGGTGGATACCTGGAATTTGCAATGGATTTATATACCAGGATGCAAGAAGTAGGGCTGTCACCAGATACTTTCACGTACAGTGCCATGGTTAATTGCCTTGGAAAAGGTGGTCACCTGGCAGCTGCTTATAAGCTTTTCTGTGGGATGGTTGAAAATGGCTGCACACCTAACCTAGTTACATACAACATAATGATTGCTCTTCAGGCCAAAGCAAGAAATTATGAAAATGTTGTGAAGCTGTACAAGGACATGCAGGTTGCCGGGTTTCGTCCTGACAAAATAACATACAGTATTGTCATGGAAGTTCTTGGTCATTGTGGTCATCTGGATGAGGCTGAGGCTGTGTTCATTGAGATGAGGCATGACTGGGCTCCTGATGAGCCTGTATATGGTCTTTTGGTGGACCTCTGGGGCAAAGCTGGCAATGTTGACAAGGCACTAGGATGGTATCATGCAATGCTTCAGGATGGTTTGCAGCCCAATGTGCCGACCTGCAATTCCCTACTGAGTGCTTTTCTTAAGATAAACAGGTTCCAAGATGCCTACAGCGTGCTCCAAAACATGCTTGCTCAGGGGCTCGTTCCATCTTTGCAGACCTACACCTTGCTGCTCAGTTGTTGTACTGAGGCTCAAGCACAGATGGGTTTATGCTGCCAGCTCATGGCGATCACTGGACACCCTGCCCACATGTTCTTGTTATATTTGCCCGATGCAGAACCTGGCGGCCAGAATGTGAGGGATCACACCAGATATTTCTTGGACATGATGCACAGTGAGGACAGAGAGAGTAAAAGGGGTTTAATGGATGCTGTCATAGATTTCCTACACAAGTCCGGCCTC AAGGAGGA GGC TGGCTTCATATGGGAGGTTGCTGCCCAGAGGAATGTGTACCCGGATTCTGTGAGGGAGAAGGACCCATCATATTGGCTCATCAACTTACACCTGATGTCGGAGGGCACTGCAGTGACTGCGCTGTCAAGGACACTGGCTTGGTTCCACAGGCAGATTCTGACAATGGGCAAATGCCCTGAAAGAATTGACATTGTCACTGGCTGGGGCAGGAGGAGCAGGGTAACCGGGTCTTCCTTGGTTAGACAGTCAGTT CAGAAGCTGCTACATCTCTTCGAATTCCCGTTCGTCA CCACGCGAGGCAATACTGGATGCTTCGTTGGATGTGGGGAGCCACTGAATAGGTGGCTGCACAATCCTTATGTTGAGCGCATGCATCTGCTCTAGAGACTCTAGTGACTAGTGAGGTTATTCCAGTCAGAAATAAGGGACTCATCTAAACAGGGTGCAGTTTTGGGGGAAGAATGATGATCTGGTGCATCTGTCTAGATTGGTCTGTAGTCTAAGTTGTAGTTCTCTTTGATTCCTTATGCTTTGAAACCTCTTATTTGTGATAACATTTAGAGATGGCATTGGTGCATTTTAAGTGAGATT ]
[+] EMBL AU066041 [ cgaGATGGTTTGCAGCCCAATGTGCCGACCTGCAATTCCCTACTGAGTGCTTTTCTTAAGNTAAACAGGTTCCAAGATGCCTACAGCGTGCTCCAAAACATGCTTGCTCAGGGGCTCGTTCCATCTTTGCAGACCTACACCTTGCTGCTCAGTTGTTGTACTGAGGCTCAAGCACAGATGGGTTTATGCTGCCAGCTCATGGCGATCACTGGACACCCTGCCCACATGTTCTTGTTATATTTGCCCGATGCAGAACCTGGCGGCCAGAATGTGAGGGATCACACCAGATATTTCTTGGACATGATGCACAGTGAGGACAGAGAGAGTAAAAGGGGTTTAATGGATGCTGTCATAGATTTCCTACACAAGTCCGGCCTCAAAGGAGGAGGGCTTGGC ]
[-] EMBL CA762113 [ ACTGCAGTGANTGCGCTGTCAAGGACACTGGCTTGGTTCCACAGGCAGATTCTGACAATGGGCAAATGCCCTGAATGAATTGACATTGTCACTGGCTGGGGCAGGAGGAGCAGGGTAACCGGGTCTTCCTTGGTTAGACAGTCAGTT CAGAAGNTGCTACATCTCTTCGAATTCCCGTTTGTCA CCACGCGAGGCAATACTGGATGCTTCGTTGGATGTGGGGAGCCCCTGAATAGGTGGCTGCACAATCCTTATGTTGAGCGCATGCATTTGCTCTAGAGACTCTAGTGACTAGTGAGGTTATTCCAGTCAGAAATAAGGGACTTATCTAAACAGGGTGCAGTTTTGGGGGAAGAATGATGATCTGGTGCATCCGTCTAGATTGGTCTGTAGTCTAAGTTGTAGTTCTCTTTGATTCCTTATGCTTTGAAACCTTTTATTTGTGATAACATTTAGAGATGGCATTGGTGCATTTTAAGTGAGATTATCCTGTTTTAATTGATAGCCAATTAGAATCATTTCGTGTTCCAGCACGTCCATTGCTGTTCCAACCTTTTTTGGGAGCTTGAATGACTCGTTAGCTGCTACTGCCAACAGATAACCTTGAGTGTAACTTTATATCTGATTTTATGTTAGAGAAATGACAACTAGATTTGCTCAAAAAAAAAAAAAAAAAA]
[+] EMBL AU032954 [ GAAAGAATTGNCATTGTCACTGGCTGGGNCAGGAGNANCAGGGTAACCGGGTCTTCCTTGGTTAGACAGTCAGTTCCANAANCTGCTACATCTCTTCGAATTCCCGTTCGTCANCCACGCGAGGCAATACTGGATGCTTCGTTGGATGTGGGGAGCCACTGAATAGGTGGCTGCACAANCCTTATGTTGAGCGCATGCATCTGCTCTAGAGACTCTAGTGACTAGTGAGGTTATTCCAGTCAGAAATAAGGGACTCATCTAAACAGGGTGCAGTTTTGGGGGAAGAATGATGATCTGGTGCATCTGTCTAGATTGGTCTGTAGTCTAAGTTGTAGTTCTCTTTGATTCCTTATGCTTTGAAACCTCTTATTTGTGATAACATTTAGAGATGGCATTGGTGCATTTTAAGTGAaaaa ]
consensusID : consensus_10336#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence
[TTTTTTAACCTTGAGTGTAACTTTATATCTGATTTTATGTTGGAGAAATGACAACTAGATTTGCTCACAGCTGTGCAGAGTACACAATCCACTACTTCTGAACTTGTTTGCTAACTAATAACAAGAGATTGTTTCACGGGTACATCTCTACGATCGATCATTGACCTCTATGTACATCTACAATGTCATTTGTCAATGTTAGTCTTCAGTAGTAAGAACAGGCAGGAGTCCTTTTTGCAGTGTGATACTTCATGATCCGTCCAGTTGCAAATATGGCTGTTGCTGCCTCATGTTGCTTGATGCCAATGTTCCTATGCTTGTCCCAGCTATATACCCACCGGTCCATGCATTCTGAAAATTGAATCCGCCAGTGACCCCATCAACATTAAGTACCTCTCCTGCAAAAAACAGGTTGGGCTGTTTCTTGCTTTCCATAGTGCTCAGCGATATCTCTGAAAGTGGAACACCTCNCGGCGGTGACAAATTCATCTTTGAATTGACCCTTAGCGACAACCTCAAACATCCATTGCTTTAACCTAAGGGCTAGCTGTGTTTAGATTATTATTTGGTATGGACGCCCAGTGCATATCACCATCTAAACTCTCCTGTTCTAGCAAGAATTTCCAAAATCTCTTCACCAGAGCGA]
[+] EMBL CF311252 [TTTTTTAACCTTGAGTGTAACTTTATATCTGATTTTATGTTGGAGAAATGACAACTAGATTTGCTCACAGCTGTGCAGAGTACACAATCCACTACTTCTGAACTTGTTTGCTAACTAATAACAAGAGATTGTTTCACGGGTACATCTCTACGATCGATCATTGACCTCTATGTACATCTACAATGTCATTTGTCAATGTTAGTCTTCAGTAGTAAGAACAGGCAGGAGTCCTTTTTGCAGTGTGATACTTCATGATCCGTCCAGTTGCAAATATGGCTGTTGCTGCCTCATGTTGCTTGATGCCAATGTTCCTATGCTTGTCCCAGCTATATACCCACCGGTCCATGCATTCTGAAAATTGAATCCGCCAGTGACCCCATCAACATTAAGTACCTCTCCTGCAAAAAACAGGTTGGGCTGTTTCTTGCTTTCCATAGTGCTCAGCGATATCTCTGAAAGTGGAACACCTCNCGGCGGTGACAAATTCATCTTTGAATTGACCCTTAGCGACAACCTCAAACATCCATTGCTTTAACCTAAGGGCTAGCTGTGTTTAGATTATTATTTGGTATGGACGCCCAGTGCATATCACCATCTAAACTCTCCTGTTCTAGCAAGAATTTCCAAAATCTCTTCACCAGAGCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10336#0 AAACCCGATAAACTGTAGTATTTATTGTTTTGAATAAAAAGATACTAATAATGAAAGATT 60
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CAGAAATCGGAACAACAGATTAGATTGGTTGAGATTATTATTCTTGCGTGACAAGTTCCA 120
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GGAGTCTGAGAGAAAAGGTTTGCTCTCTTTCCTCTGGCTCTGAAGGAGGATTGGATTCTC 180
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CCGCAAGCCACGGAACATCCCCAATCCCCACCCACCCCACCCGTGCGCCGCCGCTGCCGC 240
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GTCTCCGGGAGGGAGGGACACGGGATCGCATCGCATCGCATCTTTCTTCTTCTTCGTTGT 300
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 TGTTGCTCCTCCTCCTCACGCCGCTCCTCCTCTGCTCTCCATGTCTCCTTGGAACCTAGT 360
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 ACTACTAGCTAGGTACTACTCCTAGTAGAAAGGACGAGGAAGAGGCAGAAGAGGGGTTGC 420
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CGAACGCCGCCGCCGTCCAGCTGGGTCTCCCGCCGTGCGATTGCTGGGTGGCGCGGCTGG 480
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CGTTGGAGCCGAGAGCGCGCCGCCGCCGGCTGGAACGACCAAAGAGGCCCCTTCGGTCGT 540
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 TCCTCCGTCTCCGGTACCCGATTCGAGGTATGCCAGTGAGGGGCCATATGGAGTTCAGTG 600
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GAGGCTAGAAGTTCGCACTGACATTATCAAAAGTTCTAGCTTGATTTATTAACCAACTAA 660
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CCATTCATGTTGAGGGCAAAGCAACTCGGCACGCTAACCCAGTGTGCACGGTCCTTCTAC 720
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GTTAATGGGTCAAGGTGTGGTAGCACTGATGGAGCTTCATGCACATGCCCTGAAGATGAA 780
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 ACTTCTGCTCCAAAAAGGCAGACGGCTAATGGTATCGAGCAGAAGTTTCATTCAACTCGC 840
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 AGACCCTCTGTAAAGGCTCAAACTCCATCTGTACAACATGTTGTTGGATCCATTGGTCGG 900
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GCCACTGGTTACCCTGCTCCAGCTGTTCATATTGTTCCTTCCAACTCATCTCAAGAGACA 960
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GAGCCAGCATCTGGCAACACTAGCAACCACCCTCGAACTCCTCAGGTGCTAGGAAATGAT 1020
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 TATGTACAGCCTTCTAAGCGGACCGCCAGAAGCATTTCTCATTCTGCAATTGCAGGAGCT 1080
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GGTGTGTACACTGAGTTAGTAAACCTCAAGTCCACATCAAATAATGGAGGCACCAATCAA 1140
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GCTTCACAGATGGCCTCTAGCTATTCTTACCAGCCCTTGTCGGATGCCCAGCCTTCTAAT 1200
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 ATCAAGTCACACAACCAGCATAGTCTTCCTGAGGCAAAGATGCCTTATAATCCTTCCGTG 1260
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CAAAATAATCTTGGGAAGGGTGTATCAAGATCTGGCTATGCAAAATCAAACCAGAGTTTT 1320
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 TCAGGACCTCCTGCTATGGTTGCTAATTCACCATCGCAAATAAAGAATCAAAGACATCCT 1380
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GGTCAGCGCCACACAAATTATCATTCTAACAATTTCAGTACAGATGCTAGGTGGGATGAA 1440
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GTTCAAACCCAAAACTTGTCAGCTCCAGCTATGTATACTGGTTCTGGTCACAAATCTCAG 1500
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GCCCTTGCGGGAACAATAAAGAGTCATGGTGGAGGACCTCAGTCTAACTTAAGATCATTG 1560
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 AAGTCATTGCGCTCAGTTGAACAGTACTACCATACACTGCAGCAAATGAAATGGGGTCCT 1620
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 ATGACGGAACACGTTCTGGATAATCTCCATTGCAAGATAGATGCATTCCAGGCAAACCAA 1680
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GTACTCAAGCTGCTTCATGACCACACCATTGCACTTGGTTTCTTCCAGTGGTTAAAGCGG 1740
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CAACCAGGTTTCAAGCATGATGGTCATAGCTACACAACCATGATAGGCATCCTTGGACAA 1800
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GCCAGGCAATTTGGTACGATGAGGAAACTTCTTGATGAGATGAACAGTGTTCACTGCAAA 1860
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CCAACTGTTGTAACATACAACAGAATAATACATGCATATGGTCGTGCAAATTATCTAAGA 1920
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GAGGCTGTTAAAGTATTCGAGGAGATGCAGAAAGCCGGTTATGAGCCAGATCGGGTTACA 1980
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 TATTGTACATTGATTGATATCCATGCTAAAGGTGGATACCTGGAATTTGCAATGGATTTA 2040
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 TATACCAGGATGCAAGAAGTAGGGCTGTCACCAGATACTTTCACGTACAGTGCCATGGTT 2100
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 AATTGCCTTGGAAAAGGTGGTCACCTGGCAGCTGCTTATAAGCTTTTCTGTGAGATGGTT 2160
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GAAAATGGCTGCACACCTAACCTAGTTACATACAACATAATGATTGCTCTTCAGGCCAAA 2220
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GCAAGAAATTATGAAAATGTTGTGAAGCTGTACAAGGACATGCAGGTTGCCGGGTTTCGT 2280
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CCTGACAAAATAACATACAGTATTGTCATGGAAGTTCTTGGTCATTGTGGTCATCTGGAT 2340
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GAGGCTGAGGCTGTGTTCATTGAGATGAGGCATGACTGGGCTCCTGATGAGCCTGTATAT 2400
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GGTCTTTTGGTGGACCTCTGGGGCAAAGCTGGCAATGTTGACAAGGCACTAGGATGGTAT 2460
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CATGCAATGCTTCAGGATGGTTTGCAGCCCAATGTGCCGACCTGCAATTCCCTACTGAGT 2520
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GCTTTTCTTAAGATAAACAGGTTCCAAGATGCCTACAGCGTGCTCCAAAACATGCTTGCT 2580
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CAGGGGCTCGTTCCATCTTTGCAGACCTACACCTTGCTGCTCAGTTGTTGTACTGAGGCT 2640
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 CAAGCACAGATGGGTTTATGCTGCCAGCTCATGGCGATCACTGGACACCCTGCCCACATG 2700
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 TTCTTGTTATATTTGCCCGATGCAGAACCTGGCGGCCAGAATGTGAGGGATCACACCAGA 2760
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 TATTTCTTGGACATGATGCACAGTGAGGACAGAGAGAGTAAAAGGGGTTTAATGGATGCT 2820
consensus_10336#1 ------------------------------------------------------------
consensus_10336#0 GTCATAGATTTCCTACACAAGTCCGGCCTCAAGGAGGAGGCTGGCTTCATATGGGAGGTT 2880
consensus_10336#1 ------------------------------------------------------TTTTTT 6
**
consensus_10336#0 GCTGCCCAGAGGAATGTGTACCCGGATTCTGTGAGGGAGAAGGACCCATCATATTGGCTC 2940
consensus_10336#1 AACCTTGAGTGTAACTTTATATCTGATTTTATGTTGGAGAAATGACAACTAGATTTGCTC 66
** * ** * * **** * ** ****** * * * *** ****
consensus_10336#0 ATCAACTTACACCTGATGTCGGAGGGCACTGCAGTGACTGC--GCTGTC-AAGGACACTG 2997
consensus_10336#1 ACAGCTGTGCAGAGTACACAATCCACTACTTCTGAACTTGTTTGCTAACTAATAACAAGA 126
* * ** * *** * * ** *** * ** ***
consensus_10336#0 GCTTGGTTCCACAGGCAGATTCTGACAATGGGCAAATGCCCTGAAAGAA--TTGACATTG 3055
consensus_10336#1 GATTG-TTTCACGGGTACATCTCTACGATCGATCATTGACCTCTATGTACATCTACAATG 185
* *** ** *** ** * ** ** ** * * ** *** * * * * *** **
consensus_10336#0 TCACTGGCTGGGGCAGGAGGAGCAGGGTAACCGGGTCTTCCTTGGTTAGACAGTCAGTTC 3115
consensus_10336#1 TCATTTGTCAATGTTAGTC---TTCAGTAGTAAGAAC------AGGCAGG-AGTCCTTTT 235
*** * * * * *** * * * ** **** **
consensus_10336#0 AGAAGCTGCTACATCTCTTCGAATTCCCGTTCGTCACCACGCGAGGCAATACTGGATGCT 3175
consensus_10336#1 TGCAG-TGTGATACTTCATGA----TCCGTCCAGTTGCAAATATGGCTGTT---GCTGCC 287
* ** ** * * ** * **** * ** *** * * ***
consensus_10336#0 TCGTTGGATGTGGGGAGCCACTGAATAGGTGGCTGCACAATCCTTATGTTGAGCGCATGC 3235
consensus_10336#1 TCAT--GTTGCTTGATGCCAATGTTCCTATGCTTGTCCCAGCTATATACCCACCG-GTCC 344
** * * ** * **** ** ** ** * * * *** * ** * *
consensus_10336#0 ATCTGCTCTAGAGACTCTAGTGACTAGTGAGGTTATTCCAGTCAGAAATAAGGGACTCAT 3295
consensus_10336#1 ATGCATTCTGAAAATTGAATCCGCCAGTGA------CCCCATCAACATTAAGTACCTCTC 398
** *** * * * * * ***** ** *** * **** ***
consensus_10336#0 CTAAACAGGGTGCAGTTTTGGGGGAAGAATGATGATCTGGTGCATCTGTCTAGATTGGTC 3355
consensus_10336#1 CTG--CAAAAAACAGGTTGGGCTGTTTCTTGCTT-TCCATAGTGCTCAGCGATATC--TC 453
** ** *** ** ** * ** * ** * * * ** **
consensus_10336#0 TGTAGTCTAAGTTGTAGTTCTCTTTGATTCCTTATGCTTTGAAACCTCTTATTTGTGATA 3415
consensus_10336#1 TGAAAGTGGAACACCTCNCGGCGGTGACAAATTCATCTTTGAATTGACCC-TTAGCGACA 512
** * * * *** ** ******* * ** * ** *
consensus_10336#0 ACATTTAGAGATGGCATTGGTGCATTTTAAGTGAGATTATCCTGTTTTAATTGATAGCCA 3475
consensus_10336#1 AC-CTCAAACATC-CATTGCTTTAACCTAA--GGGCTAGCTGTGTTTAGATTATTATTTG 568
** * * * ** ***** * * *** * * * ***** *** **
consensus_10336#0 ATTAGAATCATTTCGTGTTCCAGCACGTCCATTGCTGTTCCAACCTTTTTTGGGAGCTTG 3535
consensus_10336#1 GTATGGACG---------CCCAGTGCAT--ATCACCATCTAAACTCTCCT---GTTCTAG 614
* * * **** * * ** * * *** * * * ** *
consensus_10336#0 AATGACTCGTTAGCTGCTACTGCCAACAGATAACCTTGAGTGTAACTTTATATCTGATTT 3595
consensus_10336#1 CAAGAATTTCCAAAATCTCTTCACCAGAGCGA---------------------------- 646
* ** * * ** * * * ** *
consensus_10336#0 TATGTTAGAGAAATGACAACTAGATTTGCTCAAAAAAAAAAAAAAAAAA 3644
consensus_10336#1 -------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||