cluster # 10339

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Oryza sativa
cluster # 10339 cluster # 10339 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10339#0 length = 1337 sequences # 5

consensus_10339#1 length = 621 sequences # 1
consensus_10339#2 length = 573 sequences # 1

consensusID : consensus_10339#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1337
fasta sequence

                              [CGAGCTAAGCGCAATTGGGCGAACGCCGCGAGCCGCCACCAAGCCAAACCAGAGCACTCCGCCGCCGCGCCATGGCTTCCCCGTCCCCGTCCTCCTCACCTCTCCACCCGCAGCATCAACACCAGCACCCGCTTCCCCCGCACCCGCAGCCCCAGTACCAATCCCCACCGCCTCCGATGCCGCCGCCGCCCCCCGCGGCGCCACTCAAAGCTATCGATCTGGAGGTGACCGTCGTCTCGGGCAAGCACCTGAAGAACGTCAACTGGCGCCGCGGCGACCTCCGCGCCTACGTCGTCGCCTACCTCGACCCTTCCCGCCGCGCCGCCACCCGCCCCGACGACGTCGGCGGCTGCAAGCCGGCATGGAACGAGCGCGTCGTCCTCCCTCTCCCGCCCCACCTCTCCCCGCACGATCCGTCGCTGCTCCTCTCCCTCGATGTCTTCCACTCCAAGCCCTCCGATTCGCCCAAGCCGCTCGTCGGCTCCGCCCGCTCCCCTCTCCGTGACCTCCTCTTCTCAACCAACCCTAACCCTAGCCCCGATTCCCCCGCCTCCGCGCTGATCACCCTCCCGCTCCTCCGCCCCTCCGGCCGCCCACAGGGGAAGCTCCGCATCCGCCTCGCCCTTCGCGAGCGCTCCCCGCCTCCTCCCGAGCCGCAGTATCCGCCTCCTTCCTCCTCCCCCTACTATTTCCCACCCCCTCCGCCTCCCGCATACTCGGCCCCGCCTCCGCCTCAATACGGCTCGGAGCAGTACTACCGTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTGGAATACAACAGGCAATATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAGTAGGCACTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCA-ATTGATGAAGGTGTGAAATACAAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGT-GCCTGCTGGAAGAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCA-CTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTG-CAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGTACATGTAACTTAATGTCTTGTTCTATAGTTTATCTTTCCTGTATCTGGTGTTTGGCCAAAAAAAAAA]

[+] EMBL AK069147             [CGAGCTAAGCGCAATTGGGCGAACGCCGCGAGCCGCCACCAAGCCAAACCAGAGCACTCCGCCGCCGCGCCATGGCTTCCCCGTCCCCGTCCTCCTCACCTCTCCACCCGCAGCATCAACACCAGCACCCGCTTCCCCCGCACCCGCAGCCCCAGTACCAATCCCCACCGCCTCCGATGCCGCCGCCGCCCCCCGCGGCGCCACTCAAAGCTATCGATCTGGAGGTGACCGTCGTCTCGGGCAAGCACCTGAAGAACGTCAACTGGCGCCGCGGCGACCTCCGCGCCTACGTCGTCGCCTACCTCGACCCTTCCCGCCGCGCCGCCACCCGCCCCGACGACGTCGGCGGCTGCAAGCCGGCATGGAACGAGCGCGTCGTCCTCCCTCTCCCGCCCCACCTCTCCCCGCACGATCCGTCGCTGCTCCTCTCCCTCGATGTCTTCCACTCCAAGCCCTCCGATTCGCCCAAGCCGCTCGTCGGCTCCGCCCGCTCCCCTCTCCGTGACCTCCTCTTCTCAACCAACCCTAACCCTAGCCCCGATTCCCCCGCCTCCGCGCTGATCACCCTCCCGCTCCTCCGCCCCTCCGGCCGCCCACAGGGGAAGCTCCGCATCCGCCTCGCCCTTCGCGAGCGCTCCCCGCCTCCTCCCGAGCCGCAGTATCCGCCTCCTTCCTCCTCCCCCTACTATTTCCCACCCCCTCCGCCTCCCGCATACTCGGCCCCGCCTCCGCCTCAATACGGCTCGGAGCAGTACTACCGTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTGGAATACAACAGGCAATATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAGTAGGCACTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCA ATTGATGAAGGTGTGAAATACAAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGT GCCTGCTGGAAGAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCA CTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTG CAGTGTGGTATTATGCTTCGCTCTCTTGTATATATATTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGTACATGTAACTTAATGTCTTGTTCTATAGTTT                                    ]
[+] EMBL AK106144             [      AAGCGCAATTGGGCGAACGCCGCGAGCCGCCACCAAGCCAAACCAGAGCACTCCGCCGCCGCGCCATGGCTTCCCCGTCCCCGTCCTCCTCACCTCTCCACCCGCAGCATCAACACCAGCACCCGCTTCCCCCGCACCCGCAGCCCCAGTACCAATCCCCACCGCCTCCGATGCCGCCGCCGCCCCCCGCGGCGCCACTCAAAGCTATCGATCTGGAGGTGACCGTCGTCTCGGGCAAGCACCTGAAGAACGTCAACTGGCGCCGCGGCGACCTCCGCGCCTACGTCGTCGCCTACCTCGACCCTTCCCGCCGCGCCGCCACCCGCCCCGACGACGTCGGCGGCTGCAAGCCGGCATGGAACGAGCGCGTCGTCCTCCCTCTCCCGCCCCACCTCTCCCCGCACGATCCGTCGCTGCTCCTCTCCCTCGATGTCTTCCACTCCAAGCCCTCCGATTCGCCCAAGCCGCTCGTCGGCTCCGCCCGCTCCCCTCTCCGTGACCTCCTCTTCTCAACCAACCCTAACCCTAGCCCCGATTCCCCCGCCTCCGCGCTGATCACCCTCCCGCTCCTCCGCCCCTCCGGCCGCCCACAGGGGAAGCTCCGCATCCGCCTCGCCCTTCGCGAGCGCTCCCCGCCTCCTCCCGAGCCGCAGTATCCGCCTCCTTCCTCCTCCCCCTACTATTTCCCACCCCCTCCGCCTCCCGCATACTCGGCCCCGCCTCCGCCTCAATACGGCTCGGAGCAGTACTACCGTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTGGAATACAACAGGCAATATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAGTAGGCACTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCA ATTGATGAAGGTGTGAAATACAAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGT GCCTGCTGGAAGAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCA CTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTG CAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAA                                                                       ]
[+] EMBL AK106186             [          GCAATTGGGCGAACGCCGCGAGCCGCCACCAAGCCAAACCAGAGCACTCCGCCGCCGCGCCATGGCTTCCCCGTCCCCGTCCTCCTCACCTCTCCACCCGCAGCATCAACACCAGCACCCGCTTCCCCCGCACCCGCAGCCCCAGTACCAATCCCCACCGCCTCCGATGCCGCCGCCGCCCCCCGCGGCGCCACTCAAAGCTATCGATCTGGAGGTGACCGTCGTCTCGGGCAAGCACCTGAAGAACGTCAACTGGCGCCGCGGCGACCTCCGCGCCTACGTCGTCGCCTACCTCGACCCTTCCCGCCGCGCCGCCACCCGCCCCGACGACGTCGGCGGCTGCAAGCCGGCATGGAACGAGCGCGTCGTCCTCCCTCTCCCGCCCCACCTCTCCCCGCACGATCCGTCGCTGCTCCTCTCCCTCGATGTCTTCCACTCCAAGCCCTCCGATTCGCCCAAGCCGCTCGTCGGCTCCGCCCGCTCCCCTCTCCGTGACCTCCTCTTCTCAACCAACCCTAACCCTAGCCCCGATTCCCCCGCCTCCGCGCTGATCACCCTCCCGCTCCTCCGCCCCTCCGGCCGCCCACAGGGGAAGCTCCGCATCCGCCTCGCCCTTCGCGAGCGCTCCCCGCCTCCTCCCGAGCCGCAGTATCCGCCTCCTTCCTCCTCCCCCTACTATTTCCCACCCCCTCCGCCTCCCGCATACTCGGCCCCGCCTCCGCCTCAATACGGCTCGGAGCAGTACTACCGTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTGGAATACAACAGGCAATATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAGTAGGCACTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCA ATTGATGAAGGTGTGAAATACAAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGT GCCTGCTGGAAGAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCA CTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTG CAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGTACATGTAACTTAATGTCTTGT                                              ]
[+] EMBL AK105929             [                                    CACCAAGCCAAACCAGAGCACTCCGCCGCCGCGCCATGGCTTCCCCGTCCCCGTCCTCCTCACCTCTCCACCCGCAGCATCAACACCAGCACCCGCTTCCCCCGCACCCGCAGCCCCAGTACCAATCCCCACCGCCTCCGATGCCGCCGCCGCCCCCCGCGGCGCCACTCAAAGCTATCGATCTGGAGGTGACCGTCGTCTCGGGCAAGCACCTGAAGAACGTCAACTGGCGCCGCGGCGACCTCCGCGCCTACGTCGTCGCCTACCTCGACCCTTCCCGCCGCGCCGCCACCCGCCCCGACGACGTCGGCGGCTGCAAGCCGGCATGGAACGAGCGCGTCGTCCTCCCTCTCCCGCCCCACCTCTCCCCGCACGATCCGTCGCTGCTCCTCTCCCTCGATGTCTTCCACTCCAAGCCCTCCGATTCGCCCAAGCCGCTCGTCGGCTCCGCCCGCTCCCCTCTCCGTGACCTCCTCTTCTCAACCAACCCTAACCCTAGCCCCGATTCCCCCGCCTCCGCGCTGATCACCCTCCCGCTCCTCCGCCCCTCCGGCCGCCCACAGGGGAAGCTCCGCATCCGCCTCGCCCTTCGCGAGCGCTCCCCGCCTCCTCCCGAGCCGCAGTATCCGCCTCCTTCCTCCTCCCCCTACTATTTCCCACCCCCTCCGCCTCCCGCATACTCGGCCCCGCCTCCGCCTCAATACGGCTCGGAGCAGTACTACCGTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTGGAATACAACAGGCAATATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAGTAGGCACTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCA ATTGATGAAGGTGTGAAATACAAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGT GCCTGCTGGAAGAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCA CTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTG CAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATAT                                                                             ]
[+] EMBL BI812388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGAGGGCTT CACATTGATGAAGGTGTGAAATAC AAGAGGAGAATTCGCCAGATCGGGTTGAAGATAAGGTAGTCGCCTGCTGGAAGAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCACCTGTGAGTTGGTCCTTCTCCATCCCTGCC ATGTGGGAATAAAATTGCCAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACCAATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGTACATGTAACTTAATGTCTTGTTCTATAGTTTATCTTTCCTGTATCTGGTGTTTGGCCAAAAAAAAAA]




>consensus_10339#0
CGAGCTAAGCGCAATTGGGCGAACGCCGCGAGCCGCCACCAAGCCAAACCAGAGCACTCC
GCCGCCGCGCCATGGCTTCCCCGTCCCCGTCCTCCTCACCTCTCCACCCGCAGCATCAAC
ACCAGCACCCGCTTCCCCCGCACCCGCAGCCCCAGTACCAATCCCCACCGCCTCCGATGC
CGCCGCCGCCCCCCGCGGCGCCACTCAAAGCTATCGATCTGGAGGTGACCGTCGTCTCGG
GCAAGCACCTGAAGAACGTCAACTGGCGCCGCGGCGACCTCCGCGCCTACGTCGTCGCCT
ACCTCGACCCTTCCCGCCGCGCCGCCACCCGCCCCGACGACGTCGGCGGCTGCAAGCCGG
CATGGAACGAGCGCGTCGTCCTCCCTCTCCCGCCCCACCTCTCCCCGCACGATCCGTCGC
TGCTCCTCTCCCTCGATGTCTTCCACTCCAAGCCCTCCGATTCGCCCAAGCCGCTCGTCG
GCTCCGCCCGCTCCCCTCTCCGTGACCTCCTCTTCTCAACCAACCCTAACCCTAGCCCCG
ATTCCCCCGCCTCCGCGCTGATCACCCTCCCGCTCCTCCGCCCCTCCGGCCGCCCACAGG
GGAAGCTCCGCATCCGCCTCGCCCTTCGCGAGCGCTCCCCGCCTCCTCCCGAGCCGCAGT
ATCCGCCTCCTTCCTCCTCCCCCTACTATTTCCCACCCCCTCCGCCTCCCGCATACTCGG
CCCCGCCTCCGCCTCAATACGGCTCGGAGCAGTACTACCGTTCCGGTGGGTACTACTCTG
CACCACCGCCACCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTGGAATACA
ACAGGCAATATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAGTAGGCA
CTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGATGAAGGTG
TGAAATACAAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGCCTGCTGGAA
GAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGA
TGCACTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTGCAGTGTGGT
ATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTAT
GCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATAT
TTAAAACTGTACATGTAACTTAATGTCTTGTTCTATAGTTTATCTTTCCTGTATCTGGTG
TTTGGCCAAAAAAAAAA

consensusID : consensus_10339#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 621
fasta sequence

                              [TGCCCCGGCAATTTACTTCTGGGCCCCCCGCTCCAGCACTCAATACGCTCGGACCANTACTACCGTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGTCAGGGCNCACTCTGCCCCAGGTGGAATACAACAGGCAAATATGATCCTAGACCGGGGATTGGGANTGGAAATGGGAGGTATGGAGTAGGCACCTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGATGAAGGTGTGAAATACACAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGNCCTGCTGGTAAGAGATGACGACTCAAGGGGGTACCCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCACTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTGCAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGTACATGTAACTTAATGTCTTGTTCTATAAAAAAAAAA]

[+] EMBL BQ908775             [TGCCCCGGCAATTTACTTCTGGGCCCCCCGCTCCAGCACTCAATACGCTCGGACCANTACTACCGTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGTCAGGGCNCACTCTGCCCCAGGTGGAATACAACAGGCAAATATGATCCTAGACCGGGGATTGGGANTGGAAATGGGAGGTATGGAGTAGGCACCTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGATGAAGGTGTGAAATACACAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGNCCTGCTGGTAAGAGATGACGACTCAAGGGGGTACCCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCACTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTGCAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGTACATGTAACTTAATGTCTTGTTCTATAAAAAAAAAA]




>consensus_10339#1
TGCCCCGGCAATTTACTTCTGGGCCCCCCGCTCCAGCACTCAATACGCTCGGACCANTAC
TACCGTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGTC
AGGGCNCACTCTGCCCCAGGTGGAATACAACAGGCAAATATGATCCTAGACCGGGGATTG
GGANTGGAAATGGGAGGTATGGAGTAGGCACCTGGGATTGCAGTGGGAACGGTGACGGGG
GCCCTTGGAGGGCTTGCAATTGATGAAGGTGTGAAATACACAAGAGGAGAAGTCGGCAGA
TCGGGTTGAAGATAAGGTAGTGNCCTGCTGGTAAGAGATGACGACTCAAGGGGGTACCCG
TGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCACTGTGAGTTGGTCCTTCTCCA
TCCCTGCCAATGTGGGAATAAAATTGCAGTGTGGTATTATGCTTCGCTCTCTTGTATATA
TTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAA
ATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGTACATGTAACTTAATG
TCTTGTTCTATAAAAAAAAAA

consensusID : consensus_10339#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 573
fasta sequence

                              [CCTGCAGTACCGGTCCGAATTTCCCGGGTCGACCAACGCGTCCCCGTTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTGGAATACAACAGGCAATATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAGTAGGCACTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGATGAAGGTGTGAAATACCAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGCCTGCTGGAAGAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCACTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTGCAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGTACATGTAAAAAAAAAA]

[+] EMBL BI813312             [CCTGCAGTACCGGTCCGAATTTCCCGGGTCGACCAACGCGTCCCCGTTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTGGAATACAACAGGCAATATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAGTAGGCACTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGATGAAGGTGTGAAATACCAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGCCTGCTGGAAGAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCACTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTGCAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGTACATGTAAAAAAAAAA]




>consensus_10339#2
CCTGCAGTACCGGTCCGAATTTCCCGGGTCGACCAACGCGTCCCCGTTTCCGGTGGGTAC
TACTCTGCACCACCGCCACCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTG
GAATACAACAGGCAATATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGA
GTAGGCACTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGAT
GAAGGTGTGAAATACCAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGCCT
GCTGGAAGAGATGACGACTCAAGGGGGTACCGTGAGTATTGATTATAGGAGTTCATGTGG
GTGAGGATGCACTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAATTGCA
GTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATCATGT
TACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTCTATT
ATCATATTTAAAACTGTACATGTAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10339#0      CGAGCTAAGCGCAATTGGGCGAACGCCGCGAGCCGCCACCAAGCCAAACCAGAGCACTCC 60
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      GCCGCCGCGCCATGGCTTCCCCGTCCCCGTCCTCCTCACCTCTCCACCCGCAGCATCAAC 120
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      ACCAGCACCCGCTTCCCCCGCACCCGCAGCCCCAGTACCAATCCCCACCGCCTCCGATGC 180
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      CGCCGCCGCCCCCCGCGGCGCCACTCAAAGCTATCGATCTGGAGGTGACCGTCGTCTCGG 240
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      GCAAGCACCTGAAGAACGTCAACTGGCGCCGCGGCGACCTCCGCGCCTACGTCGTCGCCT 300
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      ACCTCGACCCTTCCCGCCGCGCCGCCACCCGCCCCGACGACGTCGGCGGCTGCAAGCCGG 360
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      CATGGAACGAGCGCGTCGTCCTCCCTCTCCCGCCCCACCTCTCCCCGCACGATCCGTCGC 420
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      TGCTCCTCTCCCTCGATGTCTTCCACTCCAAGCCCTCCGATTCGCCCAAGCCGCTCGTCG 480
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      GCTCCGCCCGCTCCCCTCTCCGTGACCTCCTCTTCTCAACCAACCCTAACCCTAGCCCCG 540
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      ATTCCCCCGCCTCCGCGCTGATCACCCTCCCGCTCCTCCGCCCCTCCGGCCGCCCACAGG 600
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      GGAAGCTCCGCATCCGCCTCGCCCTTCGCGAGCGCTCCCCGCCTCCTCCCGAGCCGCAGT 660
consensus_10339#1      ------------------------------------------------------------
consensus_10339#2      ------------------------------------------------------------
                                                                                   

consensus_10339#0      ATCCGCCTCCTTCCTCCTCCCCCTACTATTTCCCACCCCCTCCGCCTCCCGCATACTCGG 720
consensus_10339#1      ---------------------------------TGCCCCGGCAATTTACTTCTGGGCC-- 25
consensus_10339#2      -----------------------------------------------CCTGCAGTACCGG 13
                                                                       *  *     *  

consensus_10339#0      CCCCGCCTCCGC-CTCAATACGGCTCGGAGCAGTACTACCGTTCCGGTGGGTACTACTCT 779
consensus_10339#1      CCCCGCTCCAGCACTCAATACG-CTCGGACCANTACTACCGTTCCGGTGGGTACTACTCT 84
consensus_10339#2      TCCGAATTT----CCCGGGTCGACC---AACGCGTCCCCGTTTCCGGTGGGTACTACTCT 66
                        **          * *    ** *    * *    *  *  *******************

consensus_10339#0      GCACCACCGCCACCGCCTCAGTATGAGTACACCG-CAGGGCCC--TCTGCCCC-GGTGGA 835
consensus_10339#1      GCACCACCGCCACCGCCTCAGTATGAGTACACCGTCAGGGCNCACTCTGCCCCAGGTGGA 144
consensus_10339#2      GCACCACCGCCACCGCCTCAGTATGAGTACACCG-CAGGGCCC--TCTGCCCC-GGTGGA 122
                       ********************************** ****** *  ******** ******

consensus_10339#0      ATACAACAGGCAA-TATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAG 894
consensus_10339#1      ATACAACAGGCAAATATGATCCTAGACCGGGGATTGGGANTGGAAATGGGAGGTATGGAG 204
consensus_10339#2      ATACAACAGGCAA-TATGATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAG 181
                       ************* ************ ****** ***** ********************

consensus_10339#0      TAGGCAC-TGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGAT 953
consensus_10339#1      TAGGCACCTGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGAT 264
consensus_10339#2      TAGGCAC-TGGGATTGCAGTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGAT 240
                       ******* ****************************************************

consensus_10339#0      GAAGGTGTGAAATACA-AAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGCC 1012
consensus_10339#1      GAAGGTGTGAAATACACAAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGNC 324
consensus_10339#2      GAAGGTGTGAAATACC-AAGAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGCC 299
                       ***************  ***************************************** *

consensus_10339#0      -TGCTGG-AAGAGATGACGACTCAAGGGGGTACC-GTGAGTATTGATTATAGGAGTTCAT 1069
consensus_10339#1      CTGCTGGTAAGAGATGACGACTCAAGGGGGTACCCGTGAGTATTGATTATAGGAGTTCAT 384
consensus_10339#2      -TGCTGG-AAGAGATGACGACTCAAGGGGGTACC-GTGAGTATTGATTATAGGAGTTCAT 356
                        ****** ************************** *************************

consensus_10339#0      GTGGGTGAGGATGCACTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAAT 1129
consensus_10339#1      GTGGGTGAGGATGCACTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAAT 444
consensus_10339#2      GTGGGTGAGGATGCACTGTGAGTTGGTCCTTCTCCATCCCTGCCAATGTGGGAATAAAAT 416
                       ************************************************************

consensus_10339#0      TGCAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATC 1189
consensus_10339#1      TGCAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATC 504
consensus_10339#2      TGCAGTGTGGTATTATGCTTCGCTCTCTTGTATATATTTTCTTCAGTGTTGTGAATTATC 476
                       ************************************************************

consensus_10339#0      ATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTC 1249
consensus_10339#1      ATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTC 564
consensus_10339#2      ATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAATTTGGTGTGTGTTATGAATGTTC 536
                       ************************************************************

consensus_10339#0      TATTATCATATTTAAAACTGTACATGTAACTTAATGTCTTGTTCTATAGTTTATCTTTCC 1309
consensus_10339#1      TATTATCATATTTAAAACTGTACATGTAACTTAATGTCTTGTTCTATAAAAAAAAAA--- 621
consensus_10339#2      TATTATCATATTTAAAACTGTACATGTAAAAAAAAAA----------------------- 573
                       *****************************   **                          

consensus_10339#0      TGTATCTGGTGTTTGGCCAAAAAAAAAA 1337
consensus_10339#1      ----------------------------
consensus_10339#2      ----------------------------