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Oryza sativa
cluster # 10347 cluster # 10347       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10347#0 length = 1060 sequences # 2  
consensus_10347#1 length = 983 sequences # 3  
consensus_10347#2 length = 691 sequences # 1  
consensus_10347#3 length = 129 sequences # 1  

consensusID : consensus_10347#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1060
fasta sequence
                              [TCAACAATTTCTTCTTCTTCTTCTTTATTTTGAGAAATTACGATGAAATTCAAAAGAAACTTGAAAATTGTGCTCACTATTTTTAAGTGGCACTATGCTTGCATATGAGTTGGTGTGTTTGCACTTAGCATCATGGTAGTATGCAGTTGTTACAGTGATGTGAATGAAGGTGTATTGGATGCAGGGCGCGGCGAGCCATGACGCCGCGGCGGCGGCAGCGGCGGCGGCGGTGCTGGGCGGCGGGCACGGCGTGCCGCGGTGGCCGCGGATGGTGTTCCTGGTGGGCGCCATGACGTGCCTGGCGATCAGCGCGACGGCGCACCTGCTGGCGTGCCACTCCAGGCGCGCCAGCGTGGTGTTCTGGCAGCTCGACTACGCCGGCATCTCCGCCATGATCGTCGCCTCCTTCGTCCCGCCGGTGTACTACGCCTTCCTGTGCCGCCGCCCGGCGCGCGTCACCTACCTCTCCGCCATCTCGGCGCTGGGCGCGCTCGTCGTCGGCGCGCTGCTCTCGCCGCCCTGCTCGTCGCCGCGGTTCCGGCGTCTCCGCGCCGCGCTGTTCCTCGCCATGGGGCTCTCCGGCGTCGTCCCGGCGCTGCACGCGCTGTGGCTCAACTGGGGCCACGCCGCCTGCTACCTGGCGCTCTCGCTCGAGGTCGCCATGGGGCTCGCCTACGCCGCCGGCGCCTGGTTCTACGTCAGCCGCGTGCCGGAGAAGTGGCGCCCGGGCGTCTTCGACGTCGTCGGCCACAGCCACCAGATCTTCCACGTGCTCGTGCTCGTCGGGGCCGTCACGCACTACGTCGCCGTCGACGTGCTGCTCAACTGGCGGGAGACGGTGGCCGCCGCGTGCAGCGCGACGTCGTAGGCGACTCTCCTCTCCTAGGCATTTTGCTCATTGCGTTTTGATGATTCAAACAATATTCAAATTTAGAAGAATGGAGCAGTGTTAGATGAGATTCAGGATCAGGGTGTGTGACCTTGTGTCATTCGATCGATCGAACATCTATATGTGATGAATTGAGGACGATGAAGAAATTGATTTACAGTACAAAAAAGG]

[+] EMBL AK110722             [TCAACAATTTCTTCTTCTTCTTCTTTATTTTGAGAAATTACGATGAAATTCAAAAGAAACTTGAAAATTGTGCTCACTATTTTTAAGTGGCACTATGCTTGCATATGAGTTGGTGTGTTTGCACTTAGCATCATGGTAGTATGCAGTTGTTACAGTGATGTGAATGAAGGTGTATTGGATGCAGGGCGCGGCGAGCCATGACGCCGCGGCGGCGGCAGCGGCGGCGGCGGTGCTGGGCGGCGGGCACGGCGTGCCGCGGTGGCCGCGGATGGTGTTCCTGGTGGGCGCCATGACGTGCCTGGCGATCAGCGCGACGGCGCACCTGCTGGCGTGCCACTCCAGGCGCGCCAGCGTGGTGTTCTGGCAGCTCGACTACGCCGGCATCTCCGCCATGATCGTCGCCTCCTTCGTCCCGCCGGTGTACTACGCCTTCCTGTGCCGCCGCCCGGCGCGCGTCACCTACCTCTCCGCCATCTCGGCGCTGGGCGCGCTCGTCGTCGGCGCGCTGCTCTCGCCGCCCTGCTCGTCGCCGCGGTTCCGGCGTCTCCGCGCCGCGCTGTTCCTCGCCATGGGGCTCTCCGGCGTCGTCCCGGCGCTGCACGCGCTGTGGCTCAACTGGGGCCACGCCGCCTGCTACCTGGCGCTCTCGCTCGAGGTCGCCATGGGGCTCGCCTACGCCGCCGGCGCCTGGTTCTACGTCAGCCGCGTGCCGGAGAAGTGGCGCCCGGGCGTCTTCGACGTCGTCGGCCACAGCCACCAGATCTTCCACGTGCTCGTGCTCGTCGGGGCCGTCACGCACTACGTCGCCGTCGACGTGCTGCTCAACTGGCGGGAGACGGTGGCCGCCGCGTGCAGCGCGACGTCGTAGGCGACTCTCCTCTCCTAGGCATTTTGCTCATTGCGTTTTGATGATTCAAACAATATTCAAATTTAGAAGAATGGAGCAGTGTTAGATGAGATTCAGGATCAGGGTGTGTGACCTTGTGTCATTCGATCGATCGAACATCTATATGTGATGAATTGAGGACGATGAAGAAATTGATTTACAGTACAAAAAAGG]
[+] EMBL BI804473             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTACGCCGCCGGCGCCTGGTTCTACGTCAGCCGCGTGCCGGAGAAGTGGCGCCCGGGCGTCTTCGACGTCGTCGGCCACAGCCACCAGATCTTCCACGTGCTCGTGCTCGTCGGGGCCGTCACGCACTACGTCGCCGTCGACGTGCTGCTCAACTGGCGGGAGACGGTGGCCGCCGCGTGCAGCGCGACGTCGTAGGCGACTCTCCTCTCCTAGGCATTTTGCTCATTGCGTTTTGATGATTCAAACAATATTCAAATTTAGAAGAATGGAGCAGTGTTAGATGAGATTCAGGATCAGGGTGTGTGACCTTGTGTCATTCGATCGATCGAACATCTATATGTGATGAATTGAGGAAGATGAAGAAATTGATTTACAGTACAAAA    ]


>consensus_10347#0 TCAACAATTTCTTCTTCTTCTTCTTTATTTTGAGAAATTACGATGAAATTCAAAAGAAAC TTGAAAATTGTGCTCACTATTTTTAAGTGGCACTATGCTTGCATATGAGTTGGTGTGTTT GCACTTAGCATCATGGTAGTATGCAGTTGTTACAGTGATGTGAATGAAGGTGTATTGGAT GCAGGGCGCGGCGAGCCATGACGCCGCGGCGGCGGCAGCGGCGGCGGCGGTGCTGGGCGG CGGGCACGGCGTGCCGCGGTGGCCGCGGATGGTGTTCCTGGTGGGCGCCATGACGTGCCT GGCGATCAGCGCGACGGCGCACCTGCTGGCGTGCCACTCCAGGCGCGCCAGCGTGGTGTT CTGGCAGCTCGACTACGCCGGCATCTCCGCCATGATCGTCGCCTCCTTCGTCCCGCCGGT GTACTACGCCTTCCTGTGCCGCCGCCCGGCGCGCGTCACCTACCTCTCCGCCATCTCGGC GCTGGGCGCGCTCGTCGTCGGCGCGCTGCTCTCGCCGCCCTGCTCGTCGCCGCGGTTCCG GCGTCTCCGCGCCGCGCTGTTCCTCGCCATGGGGCTCTCCGGCGTCGTCCCGGCGCTGCA CGCGCTGTGGCTCAACTGGGGCCACGCCGCCTGCTACCTGGCGCTCTCGCTCGAGGTCGC CATGGGGCTCGCCTACGCCGCCGGCGCCTGGTTCTACGTCAGCCGCGTGCCGGAGAAGTG GCGCCCGGGCGTCTTCGACGTCGTCGGCCACAGCCACCAGATCTTCCACGTGCTCGTGCT CGTCGGGGCCGTCACGCACTACGTCGCCGTCGACGTGCTGCTCAACTGGCGGGAGACGGT GGCCGCCGCGTGCAGCGCGACGTCGTAGGCGACTCTCCTCTCCTAGGCATTTTGCTCATT GCGTTTTGATGATTCAAACAATATTCAAATTTAGAAGAATGGAGCAGTGTTAGATGAGAT TCAGGATCAGGGTGTGTGACCTTGTGTCATTCGATCGATCGAACATCTATATGTGATGAA TTGAGGACGATGAAGAAATTGATTTACAGTACAAAAAAGG



consensusID : consensus_10347#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 983
fasta sequence
                              [AATTCGGCACGAGCAACAACGCGTCGTGGGAGACCAATAGCACGAGCTTGGAGGGGAAGGATTCGCCGGCGTTGTTGGGCGGCGGCGAACATGCGCTGGCGAGGTGGCCGCGGACGGTGTTCCTGGTGGGCGCCATGACGTGCCTGGCGGTGAGCGCGACGGCGCACCTCCTGGCGTGCCACTCGCGCAGGTTCAGCCGCCTCTTCTGGCAGCTGGACTACGCCGGCATCGCCGTCATGATCGTCGCCTCCTTCTTCCCGCCGGTGTACTACGCGTTCCTCGGCCGGGCCGTGGCGCAGGTGGCGTACCTGTCGGCGATCACCGCGCTGGGCGCGCTCGTGGTGGCGGCGCTGCTGGCGCCGGCGAGGTCGTCGCCGCGGCTGCGCCACATCCGCGCGGGGCTGTTCGTGTCCATGGGGCTCTCCGGCGTCGTGCCGGCGCTGCACGCGCTGTGGCTCAACTGGGGGCACCCGGAGTGCTACCTGGCGCTGTCGCTGGAGCTGGTGATGGGGCTCGTGTACGCCGCCGGCGCGGNGTTCTACGTGGCGCGCGTGCCCGGAACGGTGGCGCCCGNNCCCGTTCGACTGCGTCGGCCACAGCCACCAGATCTTCCACGTGCTCGTGCTCGCCGGCGCGCTCACGCACTACGCCGCCACCGCCATCCTCATCGACTGGCGCGAGGCGGCGATCGCCGCCGGCGGCGGCGCCGCGGCATTTTTGTGACCCGCCATGGCAGGATGTGTATGTATGTGCGTGCCATTGATTATTCCTTCATTATTTTTTTATGTGACGTAGCACAGGTGATTCTTTGGACTCTGACATATCAGAAGTTCGTTGGGTTGAAACTGTGAATGTGAATGTAGAAGATGGGCTTCAAGCCTTGAAAAGAAACTGTATTGCAAAAGAAAGCATACGAGGCTCTGATAGTAACTCAATCTTAAGAATGCATTTCAATTGGCCCTCCAACTTAATCGAAACTTTTG]

[+] EMBL CA754887             [AATTCGGCACGAGCAACAACGCGTCGTGGGAGACCAATAGCACGAGCTTGGAGGGGAAGGATTCGCCGGCGTTGTTGGGCGGCGGCGAACATGCGCTGGCGAGGTGGCCGCGGACGGTGTTCCTGGTGGGCGCCATGACGTGCCTGGCGGTGAGCGCGACGGCGCACCTCCTGGCGTGCCACTCGCGCAGGTTCAGCCGCCTCTTCTGGCAGCTGGACTACGCCGGCATCGCCGTCATGATCGTCGCCTCCTTCTTCCCGCCGGTGTACTACGCGTTCCTCGGCCGGGCCGTGGCGCAGGTGGCGTACCTGTCGGCGATCACCGCGCTGGGCGCGCTCGTGGTGGCGGCGCTGCTGGCGCCGGCGAGGTCGTCGCCGCGGCTGCGCCACATCCGCGCGGGGCTGTTCGTGTCCATGGGGCTCTCCGGCGTCGTGCCGGCGCTGCACGCGCTGTGGCTCAACTGGGGGCACCCGGAGTGCTACCTGGCGCTGTCGCTGGAGCTGGTGATGGGGCTCGTGTACGCCGCCGGCGCGGNGTTCTACGTGGCGCGCGTGCCCGGAACGGTGGCGCCCGNNCCCGTTCGACTGCGTCGGCCACAGCCACCAGATCTTCCACGTGCTC                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA754841             [AATTCGGCACGAGCAACAACGCGTCGTGGGAGACCAATAGCACGAGCTTGGAGGGGAAGGATTCGCCGGCGTTGTTGGGCGGCGGCGAACATGCGCTGGCGAGGTGGCCGCGGACGGTGTTCCTGGTGGGCGCCATGACGTGCCTGGCGGTGAGCGCGACGGCGCACCTCCTGGCGTGCCACTCGCGCAGGTTCAGCCGCCTCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK108530             [                                             GCTTGGAGGGGAAGGATTCGCCGGCGTTGTTGGGCGGCGGCGAACATGCGCTGGCGAGGTGGCCGCGGACGGTGTTCCTGGTGGGCGCCATGACGTGCCTGGCGGTGAGCGCGACGGCGCACCTCCTGGCGTGCCACTCGCGCAGGTTCAGCCGCCTCTTCTGGCAGCTGGACTACGCCGGCATCGCCGTCATGATCGTCGCCTCCTTCTTCCCGCCGGTGTACTACGCGTTCCTCGGCCGGGCCGTGGCGCAGGTGGCGTACCTGTCGGCGATCGCCGCGCTGGGCGCGCTCGTGGTGGCGGCGCTGCTGGCGCCGGCGAGGTCGTCGCCGCGGCTGCGCCACATCCGCGCGGGGCTGTTCGTGTCCATGGGGCTCTCCGGCGTCGTGCCGGCGCTGCACGCGCTGTGGCTCAACTGGGGGCACCCGGAGTGCTACCTGGCGCTGTCGCTGGAGCTGGTGATGGGGCTCGTGTACGCCGCCGGCGCGGGGTTCTACGTGGCGCGCGTG CCGGAGCGGTGGCGGCCGGGCGCGTTCGACTGCGTCGGCCACAGCCACCAGATCTTCCACGTGCTCGTGCTCGCCGGCGCGCTCACGCACTACGCCGCCACCGCCATCCTCATCGACTGGCGCGAGGCGGCGATCGCCGCCGGCGGCGGCGCCGCGGCATTTTTGTGACCCGCCATGGCAGGATGTGTATGTATGTGCGTGCCATTGATTATTCCTTCATTATTTTTTTATGTGACGTAGCACAGGTGATTCTTTGGACTCTGACATATCAGAAGTTCGTTGGGTTGAAACTGTGAATGTGAATGTAGAAGATGGGCTTCAAGCCTTGAAAAGAAACTGTATTGCAAAAGAAAGCATACGAGGCTCTGATAGTAACTCAATCTTAAGAATGCATTTCAATTGGCCCTCCAACTTAATCGAAACTTTTG]


>consensus_10347#1 AATTCGGCACGAGCAACAACGCGTCGTGGGAGACCAATAGCACGAGCTTGGAGGGGAAGG ATTCGCCGGCGTTGTTGGGCGGCGGCGAACATGCGCTGGCGAGGTGGCCGCGGACGGTGT TCCTGGTGGGCGCCATGACGTGCCTGGCGGTGAGCGCGACGGCGCACCTCCTGGCGTGCC ACTCGCGCAGGTTCAGCCGCCTCTTCTGGCAGCTGGACTACGCCGGCATCGCCGTCATGA TCGTCGCCTCCTTCTTCCCGCCGGTGTACTACGCGTTCCTCGGCCGGGCCGTGGCGCAGG TGGCGTACCTGTCGGCGATCACCGCGCTGGGCGCGCTCGTGGTGGCGGCGCTGCTGGCGC CGGCGAGGTCGTCGCCGCGGCTGCGCCACATCCGCGCGGGGCTGTTCGTGTCCATGGGGC TCTCCGGCGTCGTGCCGGCGCTGCACGCGCTGTGGCTCAACTGGGGGCACCCGGAGTGCT ACCTGGCGCTGTCGCTGGAGCTGGTGATGGGGCTCGTGTACGCCGCCGGCGCGGNGTTCT ACGTGGCGCGCGTGCCCGGAACGGTGGCGCCCGNNCCCGTTCGACTGCGTCGGCCACAGC CACCAGATCTTCCACGTGCTCGTGCTCGCCGGCGCGCTCACGCACTACGCCGCCACCGCC ATCCTCATCGACTGGCGCGAGGCGGCGATCGCCGCCGGCGGCGGCGCCGCGGCATTTTTG TGACCCGCCATGGCAGGATGTGTATGTATGTGCGTGCCATTGATTATTCCTTCATTATTT TTTTATGTGACGTAGCACAGGTGATTCTTTGGACTCTGACATATCAGAAGTTCGTTGGGT TGAAACTGTGAATGTGAATGTAGAAGATGGGCTTCAAGCCTTGAAAAGAAACTGTATTGC AAAAGAAAGCATACGAGGCTCTGATAGTAACTCAATCTTAAGAATGCATTTCAATTGGCC CTCCAACTTAATCGAAACTTTTG



consensusID : consensus_10347#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence
                              [TTTTTTTTTTTTTTAGNAACTCAATCTTAAGAATGCATTTCAATTGGCCCTCCAACTTAATCGAAACTTTTGAGGCTTAATTACACAAGCGGTTGCAATTCTTTGCGGCCCATATGGACTCATTGTTTGGGAGGAAAAGGCTAACATCAATCCAATTTTCAATTTTGCGATACAGGCATACAGCCACTGTGAATTGCAAAATTTGGCCTCTGCTCAAATATTTTTTTTGAAACCTTCTCTGCTCAAATATTGTTAGACCTAAAACGATACTGATTTAGTGTCTAGGAGTACCAAACAGCTACCAGGAATCTCTTTCAGACTGAAGAATGCAGTATTTGGACTTTCGACAGAAAGTATGGGAAACTATTTTAATCTCTTTCACTTAAATGGTTATGAAAAATTTTGAGAAGGTGTATTAACATGCAAACAATAAGGGAATATCCCCTCAGAGAGATCAAAATCCTCTTCCAAGAAAGTATATGGTTTGCAGCTTTGCATCGAAACAGGAATCAGATCAAAGCAATGGATGAAATTTCTAAGTTTCATTGAAAAACATAAAGCAGATCTATAACAAAAAAAATTAAGCTAAGAATTTAGGATTTATTTCCGTTTCCAAGCCGTCCTTGATGACNAACAGAAAGAGAAAAACACAAAGCTAAACTAACAGAGACGCTTGCAAACGACGGGGATT]

[+] EMBL CA761731             [TTTTTTTTTTTTTTAGNAACTCAATCTTAAGAATGCATTTCAATTGGCCCTCCAACTTAATCGAAACTTTTGAGGCTTAATTACACAAGCGGTTGCAATTCTTTGCGGCCCATATGGACTCATTGTTTGGGAGGAAAAGGCTAACATCAATCCAATTTTCAATTTTGCGATACAGGCATACAGCCACTGTGAATTGCAAAATTTGGCCTCTGCTCAAATATTTTTTTTGAAACCTTCTCTGCTCAAATATTGTTAGACCTAAAACGATACTGATTTAGTGTCTAGGAGTACCAAACAGCTACCAGGAATCTCTTTCAGACTGAAGAATGCAGTATTTGGACTTTCGACAGAAAGTATGGGAAACTATTTTAATCTCTTTCACTTAAATGGTTATGAAAAATTTTGAGAAGGTGTATTAACATGCAAACAATAAGGGAATATCCCCTCAGAGAGATCAAAATCCTCTTCCAAGAAAGTATATGGTTTGCAGCTTTGCATCGAAACAGGAATCAGATCAAAGCAATGGATGAAATTTCTAAGTTTCATTGAAAAACATAAAGCAGATCTATAACAAAAAAAATTAAGCTAAGAATTTAGGATTTATTTCCGTTTCCAAGCCGTCCTTGATGACNAACAGAAAGAGAAAAACACAAAGCTAAACTAACAGAGACGCTTGCAAACGACGGGGATT]


>consensus_10347#2 TTTTTTTTTTTTTTAGNAACTCAATCTTAAGAATGCATTTCAATTGGCCCTCCAACTTAA TCGAAACTTTTGAGGCTTAATTACACAAGCGGTTGCAATTCTTTGCGGCCCATATGGACT CATTGTTTGGGAGGAAAAGGCTAACATCAATCCAATTTTCAATTTTGCGATACAGGCATA CAGCCACTGTGAATTGCAAAATTTGGCCTCTGCTCAAATATTTTTTTTGAAACCTTCTCT GCTCAAATATTGTTAGACCTAAAACGATACTGATTTAGTGTCTAGGAGTACCAAACAGCT ACCAGGAATCTCTTTCAGACTGAAGAATGCAGTATTTGGACTTTCGACAGAAAGTATGGG AAACTATTTTAATCTCTTTCACTTAAATGGTTATGAAAAATTTTGAGAAGGTGTATTAAC ATGCAAACAATAAGGGAATATCCCCTCAGAGAGATCAAAATCCTCTTCCAAGAAAGTATA TGGTTTGCAGCTTTGCATCGAAACAGGAATCAGATCAAAGCAATGGATGAAATTTCTAAG TTTCATTGAAAAACATAAAGCAGATCTATAACAAAAAAAATTAAGCTAAGAATTTAGGAT TTATTTCCGTTTCCAAGCCGTCCTTGATGACNAACAGAAAGAGAAAAACACAAAGCTAAA CTAACAGAGACGCTTGCAAACGACGGGGATT



consensusID : consensus_10347#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 129
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTGAACTGGAAATCAATTTCTTCATCTTCCTCAATTCATCACATATAGGTGTTCGATCGATCGAATGACACAAGGTCACACACCCTGATCCTGCCCCTTGTCTCGTCCTCT]

[+] EMBL CA760700             [TTTTTTTTTTTTTTTTTTTTGAACTGGAAATCAATTTCTTCATCTTCCTCAATTCATCACATATAGGTGTTCGATCGATCGAATGACACAAGGTCACACACCCTGATCCTGCCCCTTGTCTCGTCCTCT]


>consensus_10347#3 TTTTTTTTTTTTTTTTTTTTGAACTGGAAATCAATTTCTTCATCTTCCTCAATTCATCAC ATATAGGTGTTCGATCGATCGAATGACACAAGGTCACACACCCTGATCCTGCCCCTTGTC TCGTCCTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10347#0      TCAACAATTTCTTCTTCTTCTTCTTTATTTTGAGAAATTACGATGAAATTCAAAAGAAAC 60
consensus_10347#1      ------------------------------------------------------------
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      ------------------------------------------------------------
                                                                                   

consensus_10347#0      TTGAAAATTGTGCTCACTATTTTTAAGTGGCACTATGCTTGCATATGAGTTGGTGTGTTT 120
consensus_10347#1      ------------------------------------------------------------
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      ------------------------------------------------------------
                                                                                   

consensus_10347#0      GCACTTAGCATCATGGTAGTATGCAGTTGTTACAGTGATGTGAATGAAGGTGTATTGGAT 180
consensus_10347#1      -------------------------------AATTCGGCACGAGCAACAACGCGTCG--- 26
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      ------------------------------------------------------------
                                                                                   

consensus_10347#0      GCAGGGCGCGGCGAGCCATGACGCCGCGGCGGCGGCAGCGGCGGCGGCGGTGCTGGGCGG 240
consensus_10347#1      -TGGGAGACCAATAGCACGAGCTTGGAGGGGAAGGATTCGCCGGCGTTGTTGGGCGGCGG 85
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      ------------------------------------------------------------
                                                                                   

consensus_10347#0      CGGGCACGGCGTGCCGCGGTGGCCGCGGATGGTGTTCCTGGTGGGCGCCATGACGTGCCT 300
consensus_10347#1      CGAACATGCGCTGGCGAGGTGGCCGCGGACGGTGTTCCTGGTGGGCGCCATGACGTGCCT 145
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      ------------------------------------------------------------
                                                                                   

consensus_10347#0      GGCGATCAGCGCGACGGCGCACCTGCTGGCGTGCCACTCCAGGCGCGCCAGCGTGGTGTT 360
consensus_10347#1      GGCGGTGAGCGCGACGGCGCACCTCCTGGCGTGCCACTCGCGCAGGTTCAGCCGCCTCTT 205
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      ------------------------------------------------------------
                                                                                   

consensus_10347#0      CTGGCAGCTCGACTACGCCGGCATCTCCGCCATGATCGTCGCCTCCTTCGTCCCGCCGGT 420
consensus_10347#1      CTGGCAGCTGGACTACGCCGGCATCGCCGTCATGATCGTCGCCTCCTTCTTCCCGCCGGT 265
consensus_10347#3      --------------------------------TTTTTTTTTTTTTTTTTTTTGAACTGGA 28
consensus_10347#2      -------------------------------------TTTTTTTTTTTTTTAGNAACTCA 23
                                                             *    *  **  *         

consensus_10347#0      GTACTACGCCTTCCTGTGCCGCCGCCCGGCGCGCGTCACCTACCTCTCCGCCATC-TCGG 479
consensus_10347#1      GTACTACGCGTTCCTCGGCCGGGCCGTGGCGCAGGTGGCGTACCTGTCGGCGATC-ACCG 324
consensus_10347#3      AATCAATTTCTTCATCTTCCTCAATTCATCACATATAGGTGTTCGATCGATCGA--ATGA 86
consensus_10347#2      ATCTTAAGAATGCATTTCAATTGGCCCTCCAACTTAATCGAAACTTTTGAGGCTTAATTA 83
                            *    * * *              *             *  *             

consensus_10347#0      CGCTGG-GCGCGCTCGTCGTCGGCGCGCTGCTCTCGCCGCCCTGCTCGTCGCCGCGGTTC 538
consensus_10347#1      CGCTGG-GCGCGCTCGTGGTGGCGGCGCTGCTGGCGCCGGCGAGGTCGTCGCCGCGGCTG 383
consensus_10347#3      CACAAG-GT-CACACACCCTGATCCTGCCCCTTGTCTCGTCCTCT--------------- 129
consensus_10347#2      CACAAGCGGTTGCAATTCTTTGCGGCCCATATGGACTCATTGTTTGGGAGGAAAAGGCTA 143
                       * *  * *    *      *       *   *     *                      

consensus_10347#0      CGGCGTCTCCGCGCCGCGCTGTTCCTCGCCATGGGGCTCTCCGGCGTCGTCCCGGCGCTG 598
consensus_10347#1      CGCCACATCCGCGCGGGGCTGTTCGTGTCCATGGGGCTCTCCGGCGTCGTGCCGGCGCTG 443
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      ACATCAATCCAATTTTCAATTTTGCGATACA---GGCATACAGCCACTGTGAATTGCAAA 200
                                                                                   

consensus_10347#0      CACGCGCTGTGGCTCAACTGGGGCCACGCCGCCTGCTACCTGGCGCTCTCGCTCGAGGTC 658
consensus_10347#1      CACGCGCTGTGGCTCAACTGGGGGCACCCGGAGTGCTACCTGGCGCTGTCGCTGGAGCTG 503
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      ATTTGGCCTCTGCTCAAATATTTTTTTTGAAACCTTCTCTGCTCAAATATTGTTAGACCT 260
                                                                                   

consensus_10347#0      GCCATGGGGCTCGCCTACGCCGCCGGCGCCTGGTTCTACGTCAGCCGCGTGCC-GGAGAA 717
consensus_10347#1      GTGATGGGGCTCGTGTACGCCGCCGGCGCGGNGTTCTACGTGGCGCGCGTGCCCGGAACG 563
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      AAAACGATACTGATTTAGTGTCTAGGAGTACCAAACAGC-TACCAGGAATCTCTTTCAGA 319
                                                                                   

consensus_10347#0      GTGGCGCCCGGGCGTCTTCGACGTCGTCGGCCACAGCCACCAGATCTTCCACGTGCTCGT 777
consensus_10347#1      GTGGCGCCCGNNCCCGTTCGACTGCGTCGGCCACAGCCACCAGATCTTCCACGTGCTCGT 623
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      CTGAAGAATGCAGTATTTGGACT---TTCGACAGAAAGTATGGGAAACTATTTTAATCTC 376
                                                                                   

consensus_10347#0      GCTCGTCGGGGCCGTCACGCACTACGTCGCCGTCGACGTGCTGCTCAACTGGCGGGAGAC 837
consensus_10347#1      GCTCGCCGGCGCGCTCACGCACTACGCCGCCACCGCCATCCTCATCGACTGGCGCGAGGC 683
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      TTTCACTTAAATGGTTATGAAAAATTTTGAGAAGGTGTATTAACATGCAAACAATAAGGG 436
                                                                                   

consensus_10347#0      GGTGGCCGCCGCGTGCAGCG-CGACGTCGTAG----GCGACTCTCCTCTCCTAGGCATTT 892
consensus_10347#1      GGCGATCGCCGCCGGCGGCGGCGCCGCGGCATTTTTGTGACCCGCCATGGCAGGATGTGT 743
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      AATATCCCCTCAGAGAGATCAAAATCCTCTTCCAAGAAAGTATATGGTTTGCAGCTTTGC 496
                                                                                   

consensus_10347#0      TGCTCATTGCGTTTTGATGATTCAAACAATATTCAAATTTAGAAGAATGGAGCAGTGTTA 952
consensus_10347#1      ATGTATGTGCGTGCCATTGATTATTCCTTCATTATTTTTTTATGTGACGTAGCA----CA 799
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      ATCGAAACAGGAATCAGATCAAAGCAATGGATGAAATTTCTAAGTTTCATTGAA-----A 551
                                                                                   

consensus_10347#0      GATGAGATTCAGGATCAGGGTGTGT---GACCTTGTGTCATTCGATCGATCGA-ACATCT 1008
consensus_10347#1      GGTGATTCTTTGGACTCTGACATATCAGAAGTTCGTTGGGTTGAAACTGTGAATGTGAAT 859
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      AACATAAAGCAGATCTATAACAAAA-AAAATTAAGCTAAGAATTTAGGATTTATTTCCGT 610
                                                                                   

consensus_10347#0      ATATGTGATGAATTGAGGACGATGAA--GAAATTGATTTACAGTACAAAAAAGG------ 1060
consensus_10347#1      GTAGAAGATGGGCTTCAAGCCTTGAAAAGAAACTGTATTGCAAAAGAAAGCATAC-GAGG 918
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      TTCCAAGCCGTCCTTGATGACNAACAGAAAGAGAAAAACACAAAGCTAAACTAACAGAGA 670
                                                                                   

consensus_10347#0      ------------------------------------------------------------
consensus_10347#1      CTCTGATAGTAACTCAATCTTAAGAATGCATTTCAATTGGCCCTCCAACTTAATCGAAAC 978
consensus_10347#3      ------------------------------------------------------------
consensus_10347#2      CGCTTGCAAACGACGGGGATT--------------------------------------- 691
                                                                                   

consensus_10347#0      -----
consensus_10347#1      TTTTG 983
consensus_10347#3      -----
consensus_10347#2      -----
                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)