These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10357#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3957 fasta sequence [CCGATCAGACGCCTAGTTTAGGGTTTCAGAGCTTTCTCCCCACCTCTCCCCTCCCCTCCCCCCCCTCTCTCTGTCGTCCTCTTCCTCCCGCTCGCGTCCGCCATTGACGCGGCGCGGCGCACGAGCTCCCCCTCAGATCTGACCAATCCACACCGCGAACCCTCTCACCTGACGCAACCCCGAATCTTGCCTGGAACGGCGAAGAATTCGAACACAAATCTGAAGCACACCGTCGTCACTAAGACCACACACTACATCTGATTTTTTTTTGTTTCTCCACACCCTGATTGTTTCTAGATTTTTTTTTATTCTCGTTTCGGACGCTTCATAAGAACAGATCTGCGAGCGAGTTCGCGGATCTTATCTATCTGTGTGAGAACCAAGACCCTTTTGTTGCCTGTGGACACGATCCGAACGAACTTTGACCTGAGGATTCGTTTGAGATCTGTTTGCTGCTGGTCTCGAGAGAATGATCAGGTCGATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGCGAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAGCGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGTCATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCACGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTATCTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCCATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGCATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGAGGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGCGGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAATAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAGCAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAGTACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGGTTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGCTCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGGGCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGATGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAACGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAGAGAATAAAAACCATGACA-CCCGGTCATCTTGC-GCGGCTTCTACTGGAAACATGGATGGTTGTGGATGCACCAAG-AAATTGCAAGCAATTGTGGTGG-CCATGTCTTCATGCTG-ATACTTGCTTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGCCCATCC--TTGTGGATACCCAGACGTACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCTGCTTGGGGGAACTTCAATCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTACGGTTTGTTGATTGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCGAATCTCTCGTATGTTGTCTCCTGCTGAAAAACTGTACACGTCTGCTGTGGTCGTGACTACG] [+] EMBL AK067293 [CCGATCAGACGCCTAGTTTAGGGTTTCAGAGCTTTCTCCCCACCTCTCCCCTCCCCTCCCCCCCCTCTCTCTGTCGTCCTCTTCCTCCCGCTCGCGTCCGCCATTGACGCGGCGCGGCGCACGAGCTCCCCCTCAGATCTGACCAATCCACACCGCGAACCCTCTCACCTGACGCAACCCCGAATCTTGCCTGGAACGGCGAAGAATTCGAACACAAATCTGAAGCACACCGTCGTCACTAAGACCACACACTACATCTGATTTTTTTTTGTTTCTCCACACCCTGATTGTTTCTAGATTTTTTTTTATTCTCGTTTCGGACGCTTCATAAGAACAGATCTGCGAGCGAGTTCGCGGATCTTATCTATCTGTGTGAGAACCAAGACCCTTTTGTTGCCTGTGGACACGATCCGAACGAACTTTGACCTGAGGATTCGTTTGAGATCTGTTTGCTGCTGGTCTCGAGAGAATGATCAGGTCGATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGCGAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAGCGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGTCATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCACGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTATCTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCCATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGCATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGAGGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGCGGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAATAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAGCAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAGTACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGGTTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGCTCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGGGCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGATGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAACGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAGAGAATAAAAACCATGACA CCCGGTCATCTTGC GCGGCTTCTACTGGAAACATGGATGGTTGTGGATGCACCAAG AAATTGCAAGCAATTGTGGTGG CCATGTCTTCATGCTG ATACTTGCTTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGCCCATCC TTGTGGATACCCAGACGTACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCTGCTTGGGGGAACTTCAATCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTACGGTTTGTTGATTGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCGAATCTCTCGTATGTTGTCTCCTGCTGAAAAACTGTACACGTCTGCTGTGGTCGTGACTACG] [+] EMBL AK067711 [ CAGACGCCTAGTTTAGGGTTTCAGAGCTTTCTCCCCACCTCTCCCCTCCCCTCCCCCCCCTCTCTCTGTCGTCCTCTTCCTCCCGCTCGCGTCCGCCATTGACGCGGCGCGGCGCACGAGCTCCCCCTCAGATCTGACCAATCCACACCGCGAACCCTCTCACCTGACGCAACCCCGAATCTTGCCTGGAACGGCGAAGAATTCGAACACAAATCTGAAGCACACCGTCGTCACTAAGACCACACACTACATCTGATTTTTTTTTGTTTCTCCACACCCTGATTGTTTCTAGATTTTTTTTTATTCTCGTTTCGGACGCTTCATAAGAACAGATCTGCGAGCGAGTTCGCGGATCTTATCTATCTGTGTGAGAACCAAGACCCTTTTGTTGCCTGTGGACACGATCCGAACGAACTTTGACCTGAGGATTCGTTTGAGATCTGTTTGCTGCTGGTCTCGAGAGAATGATCAGGTCGATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGCGAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAGCGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGTCATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCACGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTATCTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATACTGCCATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGCATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGAGGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGCGGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAATAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAGCAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAGTACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGGTTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGCTCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGGGCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGATGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAACGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAGAGAATAAAAACCATGACA CCCGGTCATCTTGC GCGGCTTCTACTGGAAACATGGATGGTTGTGGATGCACCAAG AAATTGCAAGCAATTGTGGTGG CCATGTCTTCATGCTG ATACTTGCTTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGCCCATCC TTGTGGATACCCAGACGTACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCTGCTTGGGGGAACTTCAATCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTA ] [+] EMBL CF323194 [ TTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGC TACTAGAGGAGATTG TATGAAGTGTGGTTCTAGGGTGGAGTACAGGTCAGCACTATGTGATACTG ] [+] EMBL OSS13984A [ AGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAACGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAGAGAATAAAAACCATGACACCCCGGTCATCTTTCGGGGGCTTCTACTtg ] [+] EMBL AU162984 [ CCAAGAAAATTGCAAGCAATTGTGGTGGCCCATGTCTTCATGCTGAATACTTGCTTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGCCCATCCCTTTGTGGATACCCAGACGTACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCTGCTTGGGGGAACTTCAATCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTACGGTTTGTTGATTGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCGAATCTCTCGTATGTTGTCTCCTGCTGAAAAAaa ] [+] EMBL AU165168 [ TCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTACGGTTTGTTGAaaaa ] consensusID : consensus_10357#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 406 fasta sequence [TGAAGGGTGCACCACACCTTGTGGATACCCCGACGCGTACCGCTTCCTGGGGACTTGTCCAGCTTCTGTTCTTGCTTGGGGGAACTTCAAATCCGTGGCTCCAGAGGCAGCTGCGACCGTTTTAACCTTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCCCATTTTGTTCGGTGGAAGTAGGTATTAAGCCTACCATTAAATCCCGTATTTATTTTTTTAGGTCCATACTGCACCAAAGTTCCGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCCATTCTTTATTATGTTCTTGTCCTTATTTGTAAAGATCTACGGTTTGTTGATGGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCACATCTCTCCAAAAAAAAAA] [+] EMBL BI809377 [TGAAGGGTGCACCACACCTTGTGGATACCCCGACGCGTACCGCTTCCTGGGGACTTGTCCAGCTTCTGTTCTTGCTTGGGGGAACTTCAAATCCGTGGCTCCAGAGGCAGCTGCGACCGTTTTAACCTTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCCCATTTTGTTCGGTGGAAGTAGGTATTAAGCCTACCATTAAATCCCGTATTTATTTTTTTAGGTCCATACTGCACCAAAGTTCCGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCCATTCTTTATTATGTTCTTGTCCTTATTTGTAAAGATCTACGGTTTGTTGATGGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCACATCTCTCCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10357#0 CCGATCAGACGCCTAGTTTAGGGTTTCAGAGCTTTCTCCCCACCTCTCCCCTCCCCTCCC 60 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CCCCCTCTCTCTGTCGTCCTCTTCCTCCCGCTCGCGTCCGCCATTGACGCGGCGCGGCGC 120 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 ACGAGCTCCCCCTCAGATCTGACCAATCCACACCGCGAACCCTCTCACCTGACGCAACCC 180 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CGAATCTTGCCTGGAACGGCGAAGAATTCGAACACAAATCTGAAGCACACCGTCGTCACT 240 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 AAGACCACACACTACATCTGATTTTTTTTTGTTTCTCCACACCCTGATTGTTTCTAGATT 300 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TTTTTTTATTCTCGTTTCGGACGCTTCATAAGAACAGATCTGCGAGCGAGTTCGCGGATC 360 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TTATCTATCTGTGTGAGAACCAAGACCCTTTTGTTGCCTGTGGACACGATCCGAACGAAC 420 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TTTGACCTGAGGATTCGTTTGAGATCTGTTTGCTGCTGGTCTCGAGAGAATGATCAGGTC 480 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGC 540 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAG 600 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGT 660 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCA 720 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCA 780 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAA 840 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 AGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGAT 900 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAG 960 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 AATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTAT 1020 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGG 1080 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATT 1140 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 ATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTAT 1200 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGC 1260 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 ATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGT 1320 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTC 1380 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 AAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAG 1440 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 AAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCCATCCTGGAATGGCCCTAGTAAT 1500 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGC 1560 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 ATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGT 1620 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCT 1680 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCC 1740 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 AGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAG 1800 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGC 1860 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 ATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCC 1920 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCC 1980 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTC 2040 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 AGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGA 2100 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTAC 2160 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 ACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGG 2220 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 AAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGG 2280 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTT 2340 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCC 2400 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATA 2460 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAA 2520 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGA 2580 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGC 2640 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGG 2700 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAA 2760 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAG 2820 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAG 2880 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGG 2940 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGC 3000 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGG 3060 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGA 3120 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTC 3180 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGT 3240 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAA 3300 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 CGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAG 3360 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 AGAATAAAAACCATGACACCCGGTCATCTTGCGCGGCTTCTACTGGAAACATGGATGGTT 3420 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 GTGGATGCACCAAGAAATTGCAAGCAATTGTGGTGGCCATGTCTTCATGCTGATACTTGC 3480 consensus_10357#1 ------------------------------------------------------------ consensus_10357#0 TTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGC-CCAT-CCTTGTG 3538 consensus_10357#1 -------------------------------------TGAAGGGTGCACCACACCTTGTG 23 ***** **** *** ******* consensus_10357#0 GATACCCAGACG--TACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCT-GCTTGGGGG 3595 consensus_10357#1 GATACCCCGACGCGTACCGCTTCC-TGGGGACTTGTCCAGCTTCTGTTCTTGCTTGGGGG 82 ******* **** ********** ***** ***** ********** ** ********* consensus_10357#0 AACTTCAA-TCCGTGGCTGCAGAGGC-GCTGCGACCGTTTTAACATTTTGTTTGTAGGAT 3653 consensus_10357#1 AACTTCAAATCCGTGGCTCCAGAGGCAGCTGCGACCGTTTTAACCTTTTGTTTGTAGGAT 142 ******** ********* ******* ***************** *************** consensus_10357#0 AAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTA 3713 consensus_10357#1 AAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCCCATTTTGTT-CGGTGGAAGTAGGTATTA 201 ******************************* ******** ****************** consensus_10357#0 ATCCTAC-ATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTG-ACAAAAGTTCAGTAG 3771 consensus_10357#1 AGCCTACCATTAAATCCCGTATTTATTTTTTTAGGTCCATACTGCACCAAAGTTCCGTAG 261 * ***** ************ **************** ****** ** ******* **** consensus_10357#0 CTAGATGTTTATTATTTGTTTCTTTATGTAGTC-ATTCTTTATTATGTTCTTGTCATTAT 3830 consensus_10357#1 CTAGATGTTTATTATTTGTTTCTTTATGTAGTCCATTCTTTATTATGTTCTTGTCCTTAT 321 ********************************* ********************* **** consensus_10357#0 TTGTAAAGATCTACGGTTTGTTGATTGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGC 3890 consensus_10357#1 TTGTAAAGATCTACGGTTTGTTGATGGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGC 381 ************************* ********************************** consensus_10357#0 CTCTCGAATCTCTCGTATGTTGTCTCCTGCTGAAAAACTGTACACGTCTGCTGTGGTCGT 3950 consensus_10357#1 CTCTCACATCTCTCCAAAAAAAAAA----------------------------------- 406 ***** ******* * consensus_10357#0 GACTACG 3957 consensus_10357#1 ------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||