cluster # 10367

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Oryza sativa
cluster # 10367 cluster # 10367 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10367#0 length = 745 sequences # 7
consensusID : consensus_10367#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 745
fasta sequence
                              [TTCCCCGACGCCGGCGG-GCAAGAGGCGAGCAGCGCGGGGGGCCGGCGGCGCCAGCGGTGAGCAGGCAAGCAGCGGAGCACGGGTGACGGCGCGTCCGCGAGCAAGAGCAGCCGAGCAGGTTGCAGACAGGCGGCCGGCCGCCGGCGACGCCACGGGAGCGCGCGTGACCAGGATCTGCTCCTGACCAGGCAGAGCAATAGGCCAGCAGCAGGCCGGCGGCTACAAAACATCTAAACAAAGGAATCAATCTGAATTAAGAAGATTAGCGTGATGTCTTTCCTCAGGCTGTTACCTC-AAAGGTTGCCGCAACTTTTTAGGCAGATGGAGCAA-GATGTTGAGACAGTGATAAACGTTCTACAGCCAGGACCGATAGGGATTGTGGAGCACAAATTCACTGATGCAGAGATCCGCAATGCCCAAGCTGTAGTAAGGCGAGCAGTCGAGAATTGGCAGAAGAGCTCGACCCTTGAGAGAAATCTTGGTAGTGGTTCTTTCGCCAAATAGAACTAATGCCACCAACACATGACTTGGTGGATCAGCCGTACCGAGTATAAACGGGTTGTTAACTTGTTACG-------ACATCGCTTTCAAAACGTTGATATATTTTCTTCCTGAACGAATCCATGCAATCAGATGCATTATATGCAGTCTGTTCACTCTGTTGCCAATAAAAGTACTTTGAACTTTTGTTAATTGTTCAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGTAGCGTATCGTTGA]

[+] EMBL C74256               [TTCCCCGACGCCGGCGG GCAAGAGGCGAGCAGCGCGNGGGGCCGGCGGCGCCAGCGGTGAGCAGGCAAGCAGCGGA CACGGGTGACGGCGCGTCCGCGAGCAAGAGCAGCCGAGCAGGTTGCAGACAGGCGGCCGGCCGCCGGCGACGCCACGGGAGCGCGCGTGACCAGGATCTGCTCCTGACCAGGCAGAGCAATAGGCCAGCAGCAGGCCGGCGGCTACAAAACATCTAAACAAAGGAATNAATCTGAATTAAGAAGATTAGCGTGATGTCTTTCCTCAGGCTGTTACCTC AAAGGTTGCCGCAACTTTTTAAGCAGATGG GCAANAATGTTGAGACAGTna                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK064879             [          CCGGCGGCGCAAGAGGCGAGCAGCGCGGGGGGCCGGCGGCGCCAGCGGTGAGCAGGCAAGCAGCGGAGCACGGGTGACGGCGCGTCCGCGAGCAAGAGCAGCCGAGCAGGTTGCAGACAGGCGGCCGGCCGCCGGCGACGCCACGGGAGCGCGCGTGACCAGGATCTGCTCCTGACCAGGCAGAGCGATAGGCCAGCAGCAGGCCGGCGGCTACAAAACATCTAAACAAAGGAATCAATCTGAATTAAGAAGATTAGCGTGATGTCTTTCCTCAGGCTGTTACCTC AAAGGTTGCCGCAACTTTTT    AGATGGAGCAA GATGTTGAGACAGTGATAAACGTTCTACAGCCAGGACCGATAGGGATTGTGGAGCACAAATTCACTGATGCAGAGATCCGCAATGCCCAAGCTGTAGTAAGGCGAGCAGTCGAGAATTGGCAGAAGAGCTCGACCCTTGAGAGAAATCTTGGTATTGGTTCTTTCGCCAAATAGAACTAATGCCACCAACACATGACTTGGTGGATCAGCCGTACCGAGTATAAACGGGTTGTTAACTTGTTACG       ACATCGCTTTCAAAACGTTGATATATTTTCTTCCTGAACGAATCCATGCAATCAGATGCATTATATGCAGTCTGTTCACTCTGTTGCCAATAAAAGTACT                                                                      ]
[+] EMBL BF430787             [                                 CGCGGGGGGCCGGCGGCGCCAGCGGTGAGCAGGCAAGCAGCGGAGCACGGGTGACGGCGCGTCCGCGAGCAAGAGCAGCCGAGCAGGTTGCAGACAGGCGGCCGGCCGCCGGCGACGCCACGGGAGCGCGCGTGACCAGGATCTGCTCCTGACCAGGCAGAGCAATAGGCCAGCAGCAGGCCGGCGGCTACAAAACATCTAAACAAAGGAATCAATCTGAATTAAGAAGATTAGCGTGATGTCTTTCCTCAGGCTGTTACCTC GAAGGTTGCCGCAACTTTTTAGGCAGATGGAGCAA GATGTTGAGACAGTGATAAACGTTCTACAGCCAGGACCGATAGGGATTGTGGAGCACAAATTCACTGATGCAGAGATCCGCAATGCCCAAGCTGTAGTAAGGCGAGCAGTCGAGAATTGGCAGAAGAGCTCGACCCTTGAGAGAAATCTTGGTAGTGGTTCTTTCGCCAAATAGAACTAATGCCACCAACACATGACTTGGTGGATCAGCCGTACCGAGTATAAACGGGTTGTTAACTTGTTACGATTTGAAACATCGCTTTCAAAACGTTGATATATTTTCTTCCTGAACGAATCCATGCAATCAGATGAATTATATGCAGTCTGTTCACTCTGTTGCCAATAAAAGTACTTTGAACTTTTG                                                           ]
[-] EMBL CF323432             [                                                                                                                                                                                                    AATAGGCCAGCAGCAGGCCGGCGGCTACAAAACATCTAAACAAAGGAATCAATCTGAATTAAGAAGATTAGCGTGATGTCTTTCCTCAGGCTGTTACCTCAAAAGGTTGCCGCAACTTTTTAGGCAGATGGAGCAA GATGTTGAGACAGTGATAAACGTTCTACAGCCAGGACCGATAGGGATTGTGGAGCACAAATTCACTGATGCAGAGATCCGCAATGCCCAAGCTGTAGTAAGGCGAGCAGTCGAGAATTGGCAGAAGAGCTCGACCCTTGAGAGAAATCTTGGTAGTGGTTCTTTCGCCAAATAGAACTAATGCCACCAACACATGACTTGGTGGATCAGCCGTACCGAGTATAAACGGGTTGTTAACTTGTTACG       ACATCGCTTTCAAAACGTTGATATATTTTCTTCCTGAACGAATCCATGCAATCAGATGCATTATATGCAGTCTGTTCACTCTGTTGCCAATAAAAGTACTTTGAACTTTTGTTAA      AAAAAAAAAAAAAA                                   ]
[+] EMBL AU101410             [                                                                                                                                                                                                    AATAGGCCAGCAGCAGGCCGGCGGCTACAAAACATCTAAACAAAGGAATCAATCTGAATTAAGAAGATTAGCGTGATGTCTTTCCTCAGGCTGTTACCTC AAAGGTTGCCGCAACTTTTTAGGCAGATGGAGCAA GATGTTGAGACAGTGATAAACGTTCTACAGCCAGGACCGATAGGGATTGTGGAGCACAAATTCACTGATGCAGAGATCCGCAATGCCCAAGCTGTAGTAAGGCGAGCAGTCGAGAATTGGCAGAAGAGCTCGACCCTTGAGAGAAATCTTGGTAGTGGTTCTTTCGCCAAATAGAACTAATGCCACCAACACATGACTTGGTGGATCAGCCGTACCGAGTATAAACGGGTTGTTAACTTGTTACG       ACATCGCTTTCAAAACGTTGATATATTTTCTTCCTGAACGAATCCATGCAATCAGATGCATTATATGCAGTCTGTTCACTCTGTTGCCAATAAAAGTACTTTGAACTTTTGTTAATTGTTCAAAAAAAAAAA                                      ]
[+] EMBL CF327926             [                                                                                                                                                                                                                                                                                        CTCAGGCTGTTACCTC AAAGGTTGCCGCAACTTTTTAGGCAGATGGAGCAA GATGTTGAGACAGTGATAAACGCTCTACAGCCAGGACCGATAGGGATTGTGGAGCACAAATTCACTGATGCAGAGATCCGCAATGCCCAAGCTGTAGTAAGGCGAGCAGTCGAGAATTGGCAGAAGAGCTCGACCCTTGAGAGAAATCTTGGTAGTGGTTCTTTCGCCAAATAGAACTAATGCCACCAACACATGACTTGGCGGATCAGCCGTACCGAGTATAAACGGGTTGTTAACTTGTTACG       ACATCGCTTTCAAAACGTTGATATATTTTCTTCCTGAACGAATCCATGCAATCAGATGCATTATATGCAGTCTGTTCACTCTGTTGCCAATAAAAGTACTTTGAACTTTTGTTAATTGTTCAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGTAGCGTA       ]
[-] EMBL CF327927             [                                                                                                                                                                                                                                                                                         TCAGGCTGTTACCTC AAAGGTTGCCGCAACTTTTTAGGCAGATGGAGCAA GATGTTGAGACAGTGATAAACGCTCTACAGCCAGGACCGATAGGGATTGTGGAGCACAAATTCACTGATGCAGAGATCCGCAATGCCCAAGCTGTAGTAAGGCGAGCAGTCGAGAATTGGCAGAAGAGCTCGACCCTTGAGAGAAATCTTGGTAGTGGTTCTTTCGCCAAATAGAACTAATGCCACCAACACATGACTTGGCGGATCAGCCGTACCGAGTATAAACGGGTTGTTAACTTGTTACG       ACATCGCTTTCAAAACGTTGATATATTTTCTTCCTGAACGAATCCATGCAATCAGATGCATTATATGCAGTCTGTTCACTCTGTTGCCAATAAAAGTACTTTGAACTTTTGTTAATTGTTCAAAAAAAAAAAAAAAAAAAACTGTCATGCCGTTAGTAGCGTATCGTTGA]




>consensus_10367#0
TTCCCCGACGCCGGCGGGCAAGAGGCGAGCAGCGCGGGGGGCCGGCGGCGCCAGCGGTGA
GCAGGCAAGCAGCGGAGCACGGGTGACGGCGCGTCCGCGAGCAAGAGCAGCCGAGCAGGT
TGCAGACAGGCGGCCGGCCGCCGGCGACGCCACGGGAGCGCGCGTGACCAGGATCTGCTC
CTGACCAGGCAGAGCAATAGGCCAGCAGCAGGCCGGCGGCTACAAAACATCTAAACAAAG
GAATCAATCTGAATTAAGAAGATTAGCGTGATGTCTTTCCTCAGGCTGTTACCTCAAAGG
TTGCCGCAACTTTTTAGGCAGATGGAGCAAGATGTTGAGACAGTGATAAACGTTCTACAG
CCAGGACCGATAGGGATTGTGGAGCACAAATTCACTGATGCAGAGATCCGCAATGCCCAA
GCTGTAGTAAGGCGAGCAGTCGAGAATTGGCAGAAGAGCTCGACCCTTGAGAGAAATCTT
GGTAGTGGTTCTTTCGCCAAATAGAACTAATGCCACCAACACATGACTTGGTGGATCAGC
CGTACCGAGTATAAACGGGTTGTTAACTTGTTACGACATCGCTTTCAAAACGTTGATATA
TTTTCTTCCTGAACGAATCCATGCAATCAGATGCATTATATGCAGTCTGTTCACTCTGTT
GCCAATAAAAGTACTTTGAACTTTTGTTAATTGTTCAAAAAAAAAAAAAAAAAACACTGT
CATGCCGTTAGTAGCGTATCGTTGA
clustalw multiple alignements is not computed in this case