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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10372#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 4110 fasta sequence
[GGGGCGGAGGAGATCGCCTCGTCGACTGGGAGCTCCTCCAGGTCATCGATGATAAAAGAGTCTAGCCAACCAGATGCGCAGTCATTTATGCTTCCTCAACATTTCAAGGAGCATGAGTCTTCTGTAATTTCCTTCCCTCCAGACAATCAGCAGTTTGTCATGTCATATAACAAGACTACCCAGAGATCTGACGATCTAGTTGAGATGACTACTGATCCTTCAATGGATTATGTGGTTGATTCTTGCGAATTTCCTCACGTGCCAACAACTAATCATGTTGCAACAATGGATAGTGGTATAGAAGCTAATGGAGAAAAAAGGAAGAAGTCCACCACAACCTCTGCAAGTGTCAGTCTAAGGAGCTCTGAGAGTGATTTCACAGTTGATCAGAAGCAGCACATTCCAGCATATCCACCTATTTCTGAAAAAGTTTCTGCAAATGAGAATCACAAGAACTCCAATAGTATTTCAACATCCAGTAATGGAACACCTTCTCCTGATTATGCCTTTCTAAGGGTTTCTGATGTCAACGTGCAAACACAAACAGTAAAACCACCACCTCCTCTGAAGCAGACATCTAAATTGCTTAAGAGGAGAGAGATTTTAGCAAAAGGAGATGTCCATCTTGAAAATCACAGCTGCCCTCCAGCCTCTTCTGCTCATGCCCCTTCAAACACCAGCACATCTCAGGCTGAAAGAAGAGACGATACTGCTTTGTTTAATAATGAGGCCAATCCCAGTTCTGCTGCAGCTGCTATGAAGGAAGCAATGGAATATGCAGAAGCTAGGTTAAGAGCTGCGAAAGAACTGATGGAGAGAAAAGGGGACAGTTTTAAACTTCGTAAGAAACCAAGCCATCATAGAAGCACAAGATCTACAGAAATAAAGGTTCCTACAGAGTCAGACACATTCGATGAGAACCTCTCCGTGAAGAAGTCAACAAAGGAGGAAATGAACTCTGAGGATTCGTTGCTGGACAAGCACCAGAAGGCTAGTGCAGTTAGAACAGATCATTGTGATGACAGTGGAAAAAGGGCATTGTCGCTGGAGAAACCTCAGCATATGCAAAGCTGCACTGCACCCAATCAAACTTCCAGTAAACTAGGTAAGTTAGGCAACTGGACATCAGGTGATGAATTTTATGAGCTGACTGGAGAAGATCAGAAACAGAAAACAGATGCAGCTGTAGGGGAGGAAGATAAGTGTGAGGTAACAAATCCTGTCACCAAGCTCAGCAAGGAACAAAAATGCGAAGTTACTGCAGCGGACTCTGATTTGGAAAGGTATGAAAAGCTGTGGGAGGTTAATGATGGCAGGGATGCAGGAGTGAAACATGTCAATCCGAGAGAAGATAATACATCTCCAATGGGGAAAGATAGGGTGTCTATGATTCTGGAAGCTTCTACAGAAAATATAGACCATGAAAAAATTTATAACTCTCATTTTGAGGGTCCTAAAGTTGTGGAAACTTCTAATGAAAGCCATGATGGTGAGGATGGGGCTGTTGAGATTCCTTGTAAGAGTGGAATCACTATTTCAGAACCAAACTTGATGAAGGACATGCACGGTTCATTCATGGAGGCTTCTTCACCTGGAGAGTATGTGGCCGATTTTGGTAAAGGCACTACAGAGGAAAGTCCAGTAGCAGGAATATCGCTGGAGCCTAAAACCACTAAAGAGGAACTTGAGGCAGCATGTGATGCTGAGATGCAATGCACCACAGGGGATAGTGAAAAATTACAAGAATCTTCAGAAGTCACCAGCATTGATAACTCACTGGCAAGACAAATTAAATCATTGATTCTAGAAGATCTCGAGGGATCTTCTGAAACTCAAGCTTTCCCAGGGGACCCCGGTACTGCTGGGTCAGAAGCTGAAACTTATGGGAGGAACCTTGGTACAACTGGGTTGGAAACTGAAAGTTATGGGAGGGAAAAGTTCAGTTTTGTTGAAGAATCATTCATGCATAATGCAAACAGGAATGTAACTGAATCACCCGTAGAAACTCCAATCCCTGAACAAGTAGAGAATGTTGAGATTGAAGATAGAGTTGGTTCATGTGCACATTCTGAAGAATCAACCGTGGATAAAGATTCCGAGTGTCCTGAAGAGGGAAGTGATATTACTTCACAAAACAACAATCTGCCAGATCATGAAGATTCAACTATGCTAAATGTATTTGAGGTGGCCAGCAAATTGATTAAAAGAGACCTAGATCAAGAAAAGCAAGATACACTACAGCCTGGTGAAGTAGAAACTAGAACTGTCTTGGATAGTAATGACAAAGATACAAAAGAAAACCCTTCAGAAAATAGTAACACGATAGGTAGTGAAGAAGTCTTGAGTCACGGTAACCAGGAGGACCAGAAGGTGCCTGAAATGGATAAAACCAAAGGACGAAGTGATGCAAATGCACAAGTTAAATTAAGTGGTGTAAACTTTTATGAAGATGGAGATGTTACAAGTGCTGCTAATAATGTTACAACTAGATTGACTACAAATTCAAAAGGCCAGGCGTCTTCCTCTTCAGAAATGCTAACTGGCAGACAGCACTTGCCTCAAGATGCTGGACCTGCTATTTCTCAGACATCTAACGGAACTTTCCCTAGTCTTGAAAAGACCGAAGAAGTTTGCAAAGAAGCTGGGAGAGAATTACCAACAGATAAATCTGCTGCATTTGAAGATGAGAATAGCAGGGCATGCAAATCAAAGGCAGAGCTAAAGCAGCAACAATTTCATTCTGAGAAGAGTAGCAGTTTACCTAAATCTGCAGAAGGTCATATCCCATCTTCTGCTGATATATCAAGAAAAGAAACACCTGGGGTTCAGAGACTCAAAGAGCAGGGAAGTCTAAGAACAGAAAGGGAAAGAGAGAAGGACAAAGAGGCTTCTCGGAGACTGGAAGAAACAAAAGAAAGGGATAAAAAATTTGAGAAGGAAAGGGAAATTGCTGAAGAGAGGGAAAGAAAAAAACTAGAAGAACAGGAAAGGGAGAGGGAACGGGAAAAGGATAGACTTGCTGTTGAAAGAGCTACAAGAGAAGCACATGAGAGAGCATTTGCTGAGGCTCGTGAAAGGGCAGAAAAAATAGCATTGGAAAGGGTTACTGCAGCACGGCAACGGGCTTCTGCTGAGGCCCGAGAAAAAGAAGAGAGAGCGAGTACTGAAGCAGCTGCTGAGAGGGCTGCTAGGATAAAAGCAGAACGTGCAGCGGTTGAACGAGCAACTGCAGAAGCTCGAGAGAGGGCAATTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTTCAAGGA-GAGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGCAAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGCACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAAAGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGGTCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGAGCTGACAGTGGTTGGCAGCCAGTGCCACTTACAGAGCTAATTACAGCTGCTGCTGTGAAGAAAGCCTACAGGAAGGCAACCCTTTGTGTCCATCCAGATAAATTACAGCAAAGGGGTGCTACAATCAGACAGAAATACATATGCGAGAAGGTTTTTGATCTTCTTAAGGATGCTTGGAACAAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTGAAACAGCCGATTTATTTTCGAGACAGGAAATTCGTTAGTAATTATATAGCCATATTGTTAGTTTGTTAATTCAATATTGGTGTAAATATGCAGTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCAATAGAAGAGCTTCATTGCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK107480 [GGGGCGGAGGAGATCGCCTCGTCGACTGGGAGCTCCTCCAGGTCATCGATGATAAAAGAGTCTAGCCAACCAGATGCGCAGTCATTTATGCTTCCTCAACATTTCAAGGAGCATGAGTCTTCTGTAATTTCCTTCCCTCCAGACAATCAGCAGTTTGTCATGTCATATAACAAGACTACCCAGAGATCTGACGATCTAGTTGAGATGACTACTGATCCTTCAATGGATTATGTGGTTGATTCTTGCGAATTTCCTCACGTGCCAACAACTAATCATGTTGCAACAATGGATAGTGGTATAGAAGCTAATGGAGAAAAAAGGAAGAAGTCCACCACAACCTCTGCAAGTGTCAGTCTAAGGAGCTCTGAGAGTGATTTCACAGTTGATCAGAAGCAGCACATTCCAGCATATCCACCTATTTCTGAAAAAGTTTCTGCAAATGAGAATCACAAGAACTCCAATAGTATTTCAACATCCAGTAATGGAACACCTTCTCCTGATTATGCCTTTCTAAGGGTTTCTGATGTCAACGTGCAAACACAAACAGTAAAACCACCACCTCCTCTGAAGCAGACATCTAAATTGCTTAAGAGGAGAGAGATTTTAGCAAAAGGAGATGTCCATCTTGAAAATCACAGCTGCCCTCCAGCCTCTTCTGCTCATGCCCCTTCAAACACCAGCACATCTCAGGCTGAAAGAAGAGACGATACTGCTTTGTTTAATAATGAGGCCAATCCCAGTTCTGCTGCAGCTGCTATGAAGGAAGCAATGGAATATGCAGAAGCTAGGTTAAGAGCTGCGAAAGAACTGATGGAGAGAAAAGGGGACAGTTTTAAACTTCGTAAGAAACCAAGCCATCATAGAAGCACAAGATCTACAGAAATAAAGGTTCCTACAGAGTCAGACACATTCGATGAGAACCTCTCCGTGAAGAAGTCAACAAAGGAGGAAATGAACTCTGAGGATTCGTTGCTGGACAAGCACCAGAAGGCTAGTGCAGTTAGAACAGATCATTGTGATGACAGTGGAAAAAGGGCATTGTCGCTGGAGAAACCTCAGCATATGCAAAGCTGCACTGCACCCAATCAAACTTCCAGTAAACTAGGTAAGTTAGGCAACTGGACATCAGGTGATGAATTTTATGAGCTGACTGGAGAAGATCAGAAACAGAAAACAGATGCAGCTGTAGGGGAGGAAGATAAGTGTGAGGTAACAAATCCTGTCACCAAGCTCAGCAAGGAACAAAAATGCGAAGTTACTGCAGCGGACTCTGATTTGGAAAGGTATGAAAAGCTGTGGGAGGTTAATGATGGCAGGGATGCAGGAGTGAAACATGTCAATCCGAGAGAAGATAATACATCTCCAATGGGGAAAGATAGGGTGTCTATGATTCTGGAAGCTTCTACAGAAAATATAGACCATGAAAAAATTTATAACTCTCATTTTGAGGGTCCTAAAGTTGTGGAAACTTCTAATGAAAGCCATGATGGTGAGGATGGGGCTGTTGAGATTCCTTGTAAGAGTGGAATCACTATTTCAGAACCAAACTTGATGAAGGACATGCACGGTTCATTCATGGAGGCTTCTTCACCTGGAGAGTATGTGGCCGATTTTGGTAAAGGCACTACAGAGGAAAGTCCAGTAGCAGGAATATCGCTGGAGCCTAAAACCACTAAAGAGGAACTTGAGGCAGCATGTGATGCTGAGATGCAATGCACCACAGGGGATAGTGAAAAATTACAAGAATCTTCAGAAGTCACCAGCATTGATAACTCACTGGCAAGACAAATTAAATCATTGATTCTAGAAGATCTCGAGGGATCTTCTGAAACTCAAGCTTTCCCAGGGGACCCCGGTACTGCTGGGTCAGAAGCTGAAACTTATGGGAGGAACCTTGGTACAACTGGGTTGGAAACTGAAAGTTATGGGAGGGAAAAGTTCAGTTTTGTTGAAGAATCATTCATGCATAATGCAAACAGGAATGTAACTGAATCACCCGTAGAAACTCCAATCCCTGAACAAGTAGAGAATGTTGAGATTGAAGATAGAGTTGGTTCATGTGCACATTCTGAAGAATCAACCGTGGATAAAGATTCCGAGTGTCCTGAAGAGGGAAGTGATATTACTTCACAAAACAACAATCTGCCAGATCATGAAGATTCAACTATGCTAAATGTATTTGAGGTGGCCAGCAAATTGATTAAAAGAGACCTAGATCAAGAAAAGCAAGATACACTACAGCCTGGTGAAGTAGAAACTAGAACTGTCTTGGATAGTAATGACAAAGATACAAAAGAAAACCCTTCAGAAAATAGTAACACGATAGGTAGTGAAGAAGTCTTGAGTCACGGTAACCAGGAGGACCAGAAGGTGCCTGAAATGGATAAAACCAAAGGACGAAGTGATGCAAATGCACAAGTTAAATTAAGTGGTGTAAACTTTTATGAAGATGGAGATGTTACAAGTGCTGCTAATAATGTTACAACTAGATTGACTACAAATTCAAAAGGCCAGGCGTCTTCCTCTTCAGAAATGCTAACTGGCAGACAGCACTTGCCTCAAGATGCTGGACCTGCTATTTCTCAGACATCTAACGGAACTTTCCCTAGTCTTGAAAAGACCGAAGAAGTTTGCAAAGAAGCTGGGAGAGAATTACCAACAGATAAATCTGCTGCATTTGAAGATGAGAATAGCAGGGCATGCAAATCAAAGGCAGAGCTAAAGCAGCAACAATTTCATTCTGAGAAGAGTAGCAGTTTACCTAAATCTGCAGAAGGTCATATCCCATCTTCTGCTGATATATCAAGAAAAGAAACACCTGGGGTTCAGAGACTCAAAGAGCAGGGAAGTCTAAGAACAGAAAGGGAAAGAGAGAAGGACAAAGAGGCTTCTCGGAGAC ]
[+] EMBL AK063417 [ TCTTCAGAAGTCACCAGCATTGATAACTCACTGGCAAGACAAATTAAATCATTGATTCTAGAAGATCTCGAGGGATCTTCTGAAACTCAAGCTTTCCCAGGGGACCCCGGTACTGCTGGGTCAGAAGCTGAAACTTATGGGAGGAACCTTGGTACAACTGGGTTGGAAACTGAAAGTTATGGGAGGGAAAAGTTCAGTTTTGTTGAAGAATCATTCATGCATAATGCAAACAGGAATGTAACTGAATCACCCGTAGAAACTCCAATCCCTGAACAAGTAGAGAATGTTGAGATTGAAGATAGAGTTGGTTCATGTGCACATTCTGAAGAATCAACCGTGGATAAAGATTCCGAGTGTCCTGAAGAGGGAAGTGATATTACTTCACAAAACAACAATCTGCCAGATCATGAAGATTCAACTATGCTAAATGTATTTGAGGTGGCCAGCAAATTGATTAAAAGAGACCTAGATCAAGAAAAGCAAGATACACTACAGCCTGGTGAAGTAGAAACTAGAACTGTCTTGGATAGTAATGACAAAGATACAAAAGAAAACCCTTCAGAAAATAGTAACACGATAGGTAGTGAAGAAGTCTTGAGTCACGGTAACCAGGAGGACCAGAAGGTGCCTGAAATGGATAAAACCAAAGGACGAAGTGATGCAAATGCACAAGTTAAATTAAGTGGTGTAAACTTTTATGAAGATGGAGATGTTACAAGTGCTGCTAATAATGTTACAACTAGATTGACTACAAATTCAAAAGGCCAGGCGTCTTCCTCTTCAGAAATGCTAACTGGCAGACAGCACTTGCCTCAAGATGCTGGACCTGCTATTTCTCAGACATCTAACGGAACTTTCCCTAGTCTTGAAAAGACCGAAGAAGTTTGCAAAGAAGCTGGGAGAGAATTACCAACAGATAAATCTGCTGCATTTGAAGATGAGAATAGCAGGGCATGCAAATCAAAGGCAGAGCTAAAGCAGCAACAATTTCATTCTGAGAAGAGTAGCAGTTTACCTAAATCTGCAGAAGGTCATATCCCATCTTCTGCTGATATATCAAGAAAAGAAACACCTGGGGTTCAGAGACTCAAAGAGCAGGGAAGTCTAAGAACAGAAAGGGAAAGAGAGAAGGACAAAGAGGCTTCTCGGAGACTGGAAGAAACAAAAGAAAGGGATAAAAAATTTGAGAAGGAAAGGGAAATTGCTGAAGAGAGGGAAAGAAAAAAACTAGAAGAACAGGAAAGGGAGAGGGAACGGGAAAAGGATAGACTTGCTGTTGAAAGAGCTACAAGAGAAGCACATGAGAGAGCATTTGCTGAGGCTCGTGAAAGGGCAGAAAAAATAGCATTGGAAAGGGTTACTGCAGCACGGCAACGGGCTTCTGCTGAGGCCCGAGAAAAAGAAGAGAGAGCGAGTACTGAAGCAGCTGCTGAGAGGGCTGCTAGGATAAAAGCAGAACGTGCAGCGGTTGAACGAGCAACTGCAGAAGCTCGAGAGAGGGCAATTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTTCAAGGA GAGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGCAAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGCACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAAAGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGGTCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGAGCTGACAGTGGTTGGCAGCCAGTGCCACTTACAGAGCTAATTACAGCTGCTGCTGTGAAGAAAGCCTACAGGAAGGCAACCCTTTGTGTCCATCCAGATAAATTACAGCAAAGGGGTGCTACAATCAGACAGAAATACATATGCGAGAAGGTTTTTGATCTTCTTAAGGATGCTTGGAACAAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTGAAACAGCCGATTTATTTTCGAGACAGGAAATTCGTTAGTAATTATATAGCCATATTGTTAGTTTGTTAATTCAATATTGGTGTAAATATGCAGTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCAATAGAAGAGCTT ]
[+] EMBL CF323618 [ AAGAGAGGGAAAGAAAAAAACTAGAAGAACAGGAAAGGGAGAGGGAACGGGAAAAGGATAGACTTGCTGTTGAAAGAGCTACAAGAGAAGCACATGAGAGAGCATTTGCTGAGGCTCGTGAAAGGGCAGAAAAAATAGCATTGGAAAGGGTTACTGCAGCACGGCAACGGGCTTCTGCTGAGGCCCGAGAAAAAGAAGAGAGAGCGAGTACTGAAGCAGCTGCTGAGAGGGCTGCTAGGATAAAAGCAGAACGTGCAGCGGTTGAACGAGCAACTGCAGAAGCTCGAGAGAGGGCAATTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTT AAGGAGGGGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTC ]
[-] EMBL AU174978 [ TTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTTCAAGGA GAGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGCAAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGCACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAAAGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGGTCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGAGCTGACAGTGGTTGGCAGCCAGTGCCACTTACAGAGCTAATTACAGCTGCTGCTGTGAAGAAAGCCTACAGGAAGGCA ]
[+] EMBL AU174979 [ AGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTTCAAGGA GAGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGCAAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGCACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAAAGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGGTCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGAGCTGACAGTGGTTGGCAGCCAGTGCCACTTACAGAGCTAATTACAGCTGCT ]
[+] EMBL CF328298 [ GTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCAATAGAAGAGCTTCATTGCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10372#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence
[GCTGACCACGTGGTTGGCACGCCCACGTGGCCACCTTACACGAGCTAATTACCACGCTGCTGCTGTGAAGAAAGCCCTACCACGGAAGGCCAACCCCTTTGTGTCCCACTCCACGATANAATTACACGCCACAAGGGGGTGCTACACATCAGACAGAAATACATATGCGAGAAGGTTTTTGATCTTCTTAAGGATGCTTGGAACACAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTGAAACCGCCGATTTATTTTCGAGACCGGAAATTCGTTAGTAATTATATAGCCATATTGTTAGTTTGTTAATTCCAATATTGGTGTAAATATCCCGTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCCATAGAAGAGCTTCATTGCTCCTAGTCTCTTGTCGAAAAAAAAAA]
[+] EMBL BQ907756 [GCTGACCACGTGGTTGGCACGCCCACGTGGCCACCTTACACGAGCTAATTACCACGCTGCTGCTGTGAAGAAAGCCCTACCACGGAAGGCCAACCCCTTTGTGTCCCACTCCACGATANAATTACACGCCACAAGGGGGTGCTACACATCAGACAGAAATACATATGCGAGAAGGTTTTTGATCTTCTTAAGGATGCTTGGAACACAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTGAAACCGCCGATTTATTTTCGAGACCGGAAATTCGTTAGTAATTATATAGCCATATTGTTAGTTTGTTAATTCCAATATTGGTGTAAATATCCCGTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCCATAGAAGAGCTTCATTGCTCCTAGTCTCTTGTCGAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10372#0 GGGGCGGAGGAGATCGCCTCGTCGACTGGGAGCTCCTCCAGGTCATCGATGATAAAAGAG 60
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TCTAGCCAACCAGATGCGCAGTCATTTATGCTTCCTCAACATTTCAAGGAGCATGAGTCT 120
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TCTGTAATTTCCTTCCCTCCAGACAATCAGCAGTTTGTCATGTCATATAACAAGACTACC 180
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CAGAGATCTGACGATCTAGTTGAGATGACTACTGATCCTTCAATGGATTATGTGGTTGAT 240
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TCTTGCGAATTTCCTCACGTGCCAACAACTAATCATGTTGCAACAATGGATAGTGGTATA 300
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GAAGCTAATGGAGAAAAAAGGAAGAAGTCCACCACAACCTCTGCAAGTGTCAGTCTAAGG 360
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AGCTCTGAGAGTGATTTCACAGTTGATCAGAAGCAGCACATTCCAGCATATCCACCTATT 420
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TCTGAAAAAGTTTCTGCAAATGAGAATCACAAGAACTCCAATAGTATTTCAACATCCAGT 480
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AATGGAACACCTTCTCCTGATTATGCCTTTCTAAGGGTTTCTGATGTCAACGTGCAAACA 540
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CAAACAGTAAAACCACCACCTCCTCTGAAGCAGACATCTAAATTGCTTAAGAGGAGAGAG 600
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 ATTTTAGCAAAAGGAGATGTCCATCTTGAAAATCACAGCTGCCCTCCAGCCTCTTCTGCT 660
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CATGCCCCTTCAAACACCAGCACATCTCAGGCTGAAAGAAGAGACGATACTGCTTTGTTT 720
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AATAATGAGGCCAATCCCAGTTCTGCTGCAGCTGCTATGAAGGAAGCAATGGAATATGCA 780
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GAAGCTAGGTTAAGAGCTGCGAAAGAACTGATGGAGAGAAAAGGGGACAGTTTTAAACTT 840
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CGTAAGAAACCAAGCCATCATAGAAGCACAAGATCTACAGAAATAAAGGTTCCTACAGAG 900
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TCAGACACATTCGATGAGAACCTCTCCGTGAAGAAGTCAACAAAGGAGGAAATGAACTCT 960
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GAGGATTCGTTGCTGGACAAGCACCAGAAGGCTAGTGCAGTTAGAACAGATCATTGTGAT 1020
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GACAGTGGAAAAAGGGCATTGTCGCTGGAGAAACCTCAGCATATGCAAAGCTGCACTGCA 1080
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CCCAATCAAACTTCCAGTAAACTAGGTAAGTTAGGCAACTGGACATCAGGTGATGAATTT 1140
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TATGAGCTGACTGGAGAAGATCAGAAACAGAAAACAGATGCAGCTGTAGGGGAGGAAGAT 1200
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AAGTGTGAGGTAACAAATCCTGTCACCAAGCTCAGCAAGGAACAAAAATGCGAAGTTACT 1260
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GCAGCGGACTCTGATTTGGAAAGGTATGAAAAGCTGTGGGAGGTTAATGATGGCAGGGAT 1320
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GCAGGAGTGAAACATGTCAATCCGAGAGAAGATAATACATCTCCAATGGGGAAAGATAGG 1380
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GTGTCTATGATTCTGGAAGCTTCTACAGAAAATATAGACCATGAAAAAATTTATAACTCT 1440
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CATTTTGAGGGTCCTAAAGTTGTGGAAACTTCTAATGAAAGCCATGATGGTGAGGATGGG 1500
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GCTGTTGAGATTCCTTGTAAGAGTGGAATCACTATTTCAGAACCAAACTTGATGAAGGAC 1560
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 ATGCACGGTTCATTCATGGAGGCTTCTTCACCTGGAGAGTATGTGGCCGATTTTGGTAAA 1620
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GGCACTACAGAGGAAAGTCCAGTAGCAGGAATATCGCTGGAGCCTAAAACCACTAAAGAG 1680
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GAACTTGAGGCAGCATGTGATGCTGAGATGCAATGCACCACAGGGGATAGTGAAAAATTA 1740
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CAAGAATCTTCAGAAGTCACCAGCATTGATAACTCACTGGCAAGACAAATTAAATCATTG 1800
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 ATTCTAGAAGATCTCGAGGGATCTTCTGAAACTCAAGCTTTCCCAGGGGACCCCGGTACT 1860
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GCTGGGTCAGAAGCTGAAACTTATGGGAGGAACCTTGGTACAACTGGGTTGGAAACTGAA 1920
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AGTTATGGGAGGGAAAAGTTCAGTTTTGTTGAAGAATCATTCATGCATAATGCAAACAGG 1980
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AATGTAACTGAATCACCCGTAGAAACTCCAATCCCTGAACAAGTAGAGAATGTTGAGATT 2040
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GAAGATAGAGTTGGTTCATGTGCACATTCTGAAGAATCAACCGTGGATAAAGATTCCGAG 2100
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TGTCCTGAAGAGGGAAGTGATATTACTTCACAAAACAACAATCTGCCAGATCATGAAGAT 2160
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TCAACTATGCTAAATGTATTTGAGGTGGCCAGCAAATTGATTAAAAGAGACCTAGATCAA 2220
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GAAAAGCAAGATACACTACAGCCTGGTGAAGTAGAAACTAGAACTGTCTTGGATAGTAAT 2280
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GACAAAGATACAAAAGAAAACCCTTCAGAAAATAGTAACACGATAGGTAGTGAAGAAGTC 2340
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TTGAGTCACGGTAACCAGGAGGACCAGAAGGTGCCTGAAATGGATAAAACCAAAGGACGA 2400
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AGTGATGCAAATGCACAAGTTAAATTAAGTGGTGTAAACTTTTATGAAGATGGAGATGTT 2460
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 ACAAGTGCTGCTAATAATGTTACAACTAGATTGACTACAAATTCAAAAGGCCAGGCGTCT 2520
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TCCTCTTCAGAAATGCTAACTGGCAGACAGCACTTGCCTCAAGATGCTGGACCTGCTATT 2580
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TCTCAGACATCTAACGGAACTTTCCCTAGTCTTGAAAAGACCGAAGAAGTTTGCAAAGAA 2640
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GCTGGGAGAGAATTACCAACAGATAAATCTGCTGCATTTGAAGATGAGAATAGCAGGGCA 2700
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TGCAAATCAAAGGCAGAGCTAAAGCAGCAACAATTTCATTCTGAGAAGAGTAGCAGTTTA 2760
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CCTAAATCTGCAGAAGGTCATATCCCATCTTCTGCTGATATATCAAGAAAAGAAACACCT 2820
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GGGGTTCAGAGACTCAAAGAGCAGGGAAGTCTAAGAACAGAAAGGGAAAGAGAGAAGGAC 2880
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AAAGAGGCTTCTCGGAGACTGGAAGAAACAAAAGAAAGGGATAAAAAATTTGAGAAGGAA 2940
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AGGGAAATTGCTGAAGAGAGGGAAAGAAAAAAACTAGAAGAACAGGAAAGGGAGAGGGAA 3000
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CGGGAAAAGGATAGACTTGCTGTTGAAAGAGCTACAAGAGAAGCACATGAGAGAGCATTT 3060
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GCTGAGGCTCGTGAAAGGGCAGAAAAAATAGCATTGGAAAGGGTTACTGCAGCACGGCAA 3120
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 CGGGCTTCTGCTGAGGCCCGAGAAAAAGAAGAGAGAGCGAGTACTGAAGCAGCTGCTGAG 3180
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AGGGCTGCTAGGATAAAAGCAGAACGTGCAGCGGTTGAACGAGCAACTGCAGAAGCTCGA 3240
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GAGAGGGCAATTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGA 3300
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GAACGGTACAGATCCTCTTTCAAGGAGAGTTTTAAGTCCAGCAATCTGGATAATCGACAG 3360
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGC 3420
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGC 3480
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 ACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAA 3540
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 AGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGG 3600
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 TCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGA 3660
consensus_10372#1 ------------------------------------------------------------
consensus_10372#0 GCTGACA--GTGGTTGGCA-GCCAGTG---CCAC-TTACA-GAGCTAATTACA--GCTGC 3710
consensus_10372#1 GCTGACCACGTGGTTGGCACGCCCACGTGGCCACCTTACACGAGCTAATTACCACGCTGC 60
****** ********** *** * **** ***** *********** *****
consensus_10372#0 TGCTGTGAAGAAAGCCT----ACAGGAAGGCAACCC-TTTGTGTCCA--TCCA-GATAAA 3762
consensus_10372#1 TGCTGTGAAGAAAGCCCTACCACGGAAGGCCAACCCCTTTGTGTCCCACTCCACGATANA 120
**************** ** * * * ****** ********* **** **** *
consensus_10372#0 -TTACA----GCAAAGGGGTGCTACA-ATCAGACAGAAATACATATGCGAGAAGGTTTTT 3816
consensus_10372#1 ATTACACGCCACAAGGGGGTGCTACACATCAGACAGAAATACATATGCGAGAAGGTTTTT 180
***** *** *********** *********************************
consensus_10372#0 GATCTTCTTAAGGATGCTTGGAACA-AGTTCACTTCGGAGGAGCGCTAGGATGGATGCTG 3875
consensus_10372#1 GATCTTCTTAAGGATGCTTGGAACACAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTG 240
************************* **********************************
consensus_10372#0 AAACAGCCGATTTATTTTCGAGACAGGAAATTCGTTAGTAATTATATAGCCATATTGTTA 3935
consensus_10372#1 AAACCGCCGATTTATTTTCGAGACCGGAAATTCGTTAGTAATTATATAGCCATATTGTTA 300
**** ******************* ***********************************
consensus_10372#0 GTTTGTTAATTC-AATATTGGTGTAAATATGCAGTTCTAGATATCTTGCTAGATGATGAT 3994
consensus_10372#1 GTTTGTTAATTCCAATATTGGTGTAAATATCCCGTTCTAGATATCTTGCTAGATGATGAT 360
************ ***************** * ***************************
consensus_10372#0 GACGCTCGTCGCTCCTTGAATCGATTCAATAGAAGAGCTTCATTGCTCCTAAAAAAAAAA 4054
consensus_10372#1 GACGCTCGTCGCTCCTTGAATCGATTCCATAGAAGAGCTTCATTGCTCCTAGTCTCTTGT 420
*************************** ***********************
consensus_10372#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4110
consensus_10372#1 CGAAAAAAAAAA-------------------------------------------- 432
**********
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||