These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10392#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1122 fasta sequence [AGGCTCTCAGCTCAAGCCTCGGCTCTCTTCCTCACTCACGCGGCCACGCCTTTGCGTTTCTTCGCCGCCGGCTAAACCCTTTCCCGTGTCGTCCCGTACCCCATTCCCACGCGCCGTCGGCTCAATCATTCTCGCCCGCCACCCTATACATCTGGAAAACTTTAAGGGCATCTCCTTTTGAGCTATCAAGAATGGCGTCCCAAAAGCCCGAAAAGAAAGGTCCCCCTGATGCTGCTGAAGAATTTTTTCATCACCGCATGCTACAGCCGGATGCAATTTCAAGGGACCGCAGCAAGCTGCCGGGACCATTGAATTGGCAAGAACATAAAAATACAAGTCAATGTCACCAGACACGTGTTTGCACCCGTCTAGCAATGCACTACTACAACTTGGAAAATCCAGCCAATAAAGCAACCAAGGGAGTAGCCAAGGATAGCCACATGTTTATCTTGAGGCTTGCTGACAAACAATGTTTCTGGCACGTGTACTTTAGAGCCACTGTTGCTGGCTGTTCAACACCCTTTTTTGCTGAATTAAGGGGGGAAGAAAAACCAAATGAGGTCACAATGTGCAAGATTGTCGATAAATACAATGGTTCCGTTGATATCTGTGCCCATTGCTGGGGTGGAATCAGGCATCCAAAGGACGGTGGATTTGTTGGCTACGTAGGAGCATTGCCTGAGGGGCTGACCATTAATCACGCTAACATGCTGATG-CTTGAGGTCCGGAAAGAAGAGAGAGACTTGAAAGACGAGAATTGCTGACGACTGGAGGAGAGGTGACGCTGCTGTATGTGGGGGAAGAATCTATCAAGTATCAAGTGTCAACTGAATGCATGGCTTGGAATGCTCCACGACGATTGGAAGATTAGCTAGCTAGCGTCTTCTTTATGTTGTTGACTACTTGTTCATTCTGGAATGCTGTTACGGTTGTTCTTTTGTTGTTGTTGTCACACCTGCATCTGCAATTACTCCCCTATGAGGCAGTCGTTATTCCATTGTTTATTAGTAGGCCGATCGGTCAGTCACATATGATCGGTCAGTCCCGCTACTCTCAAAACTTATTAAAAGAA-GTGTTGCAATGTGTCGTTGGAGCAGTTTTGTGGTACGGTAAAAAAAAAAA] [+] EMBL C27903 [AGGCTCTCAGCTCAAGCCTCGGCTCTCTTCCTCACTCACGCGGCCACG CTTTGCNTTTNTTCGCCGCCGGCTAAACCCTTTCCCGTGTCGTCCCGTACCCCATTCCCACGCGCCGTCGGCTCAATCATTCTCGCCCGCCACCCTATACATCTGGAAAACTTTAAGGGCATCTCCTTTTGAGCTATCAAGAATGGCGTCCCAAAAGCCCGAAAAGAAAGGTCCCCCTGATGCTGCTGAAGAATTTTTTCATCACCGCATGCTACAGCCGGATGCAATTTCAAGGGACCG AGCAAGCTTCCGGGACCATNGAATT ] [+] EMBL AK102181 [ TCCTCACTCACGCGGCCACGCCTTTGCGTTTCTTCGCCGCCGGCTAAACCCTTTCCCGTGTCGTCCCGTACCCCATTCCCACGCGCCGTCGGCTCAATCATTCTCGCCCGCCACCCTATACATCTGGAAAACTTTAAGGGCATCTCCTTTTGAGCTATCAAGAATGGCGTCCCAAAAGCCCGAAAAGAAAGGTCCCCCTGATGCTGCTGAAGAATTTTTTCATCACCGCATGCTACAGCCGGATGCAATTTCAAGGGACCGCAGCAAGCTGCCGGGACCATTGAATTGGCAAGAACATAAAAATACAAGTCAATGTCACCAGACACGTGTTTGCACCCGTCTAGCAATGCACTACTACAACTTGGAAAATCCAGCCAATAAAGCAACCAAGGGAGTAGCCAAGGATAGCCACATGTTTATCTTGAGGCTTGCTGACAAACAATGTTTCTGGCACGTGTACTTTAGAGCCACTGTTGCTGGCTGTTCAACACCCTTTTTTGCTGAATTAAGGGGGGAAGAAAAACCAAATGAGGTCACAATGTGCAAGATTGTCGATAAATACAATGGTTCCGTTGATATCTGTGCCCATTGCTGGGGTGGAATCAGGCATCCAAAGGACGGTGGATTTGTTGGCTACGTAGGAGCATTGCCTGAGGGGCTGACCATTAATCACGCTAACATGCTGATG CTTGAGGTCCGGAAAGAAGAGAGAGACTTGAAAGACGAGAATTGCTGACGACTGGAGGAGAGGTGACGCTGCTGTATGTGGGGGAAGAATCTATCAAGTATCAAGTGTCAACTGAATGCATGGCTTGGAATGCTCCACGACGATTGGAAGATTAGCTAGCTAGCGTCTTCTTTATGTTGTTGACTACTTGTTCATTCTGGAATGCTGTTACGGTTGTTCTTTTGTTGTTGTTGTCACACCTGCATCTGCAATTACTCCCCTATGAGGCAGTCGTTATTCCATTGTTTATTAGTAGGCCGATCGGTCAGTCACATATGATCGGTCAGTCCCGCTACTCTCAAAACTTATTAAAAGAA GTGTTGCAATGTGTCGTTGGAGCAGTTTTGTGGTACGGT ] [+] EMBL CF324435 [ CACTCACGCGGCCACGCCTTTGCGTTTCTTCGCCGCCGGCTAAACCCTTTCCCGTGTCGTCCCGTACCCCATTCCCACGCGCCGTCGGCTCAATCATTCTCGCCCGCCACCCTATACATCTGGAAAACTTTAAGGGCATCTCCTTTTGAGCTATCAAGAATGGCGTCCCAAAAGCCCGAAAAGAAAGGTCCCCCTGATGCTGCTGAAGAATTTTTTCATCACCGCATGCTACAGCCGGATGCAATTTCAAGGGACCGCAGCAAGCTGCCGGGACCATTGAATTGGCAAGAACATAAAAATACAAGTCAATGTCACCAGACACGTGTTTGCACCCGTCTAGCAATGCACTACTACAACTTGGAAAATCCAGCCAATAAAGCAACCAAGGGAGTAGCCAAGGATAGCCACATGTTTATCTTGAGGCTTGC ] [+] EMBL CB685268 [ CCCTCCTTCTGATGAAGAATTTTTTCATCACCGCATGCTACAGCCGGATGCAATTTCAAGGGACCGCAGCAAGCTGCCGGGACCATTGAATTGGCAAGAACATAAAAATACAAGTCAATGTCACCAGACACGTGTTTGCACCCGTCTAGCAATGCACTACTACAACTTGGAAAATCCAGCCAATAAAGCAACCAAGGGAGTAGCCAAGGATAGCCACATGTTTATCTTGAGGCTTGCTGACAAACAATGTTTCTGGCACGTGTACTTTAGAGCCACTGTTGCTGGCTGTTCAACACCCTTTTTTGCTGAATTAAGGGGGGAAGAAAAACCAAATGAGGTCACAATGTGCAAGATTGTCGATAAATACAATGGTTCCGTTGATATCTGTGCCCATTGCTGGGGTGGAATCAGGCATCCAAAGGACGGTGGATTTGTTGGCTACGTAGGAGCATTGCCTGAGGGGCTGACCATTAATCACGCTAACATGCTGATG CTTGAGGTCCGGAAAGAAGAGAGAGACTTGAAAGACGAGAATTGCTGACGACTGGAGGAGAGGTGACGCTGCTGTATGTGGGGGAAGAATCTATCAAGTATCAAGTGTCAACTGAATGCATGGCTTGGAATGCTCCACGACGATTGGAAGATTAGCTAGCTAGCGTCTTCTTTATGTTGTTGACTACTTGTTCATTCTGGAATGCTGTTACGGTTGTTCTTTTGTTGTTGTTGTCACACCTGCATCTGCAATTAC ] [-] EMBL CF313026 [ TACTACAACTTGGAAAATCCAGCCAATAAAGCAACCAAGGGAGTAGCCAAGGATAGCCACATGTTTATCTTGAGGCTTGCTGACAAACAATGTTTCTGGCACGTGTACTTTAGAGCCACTGTTGCTGGCTGTTCAACACCCTTTTTTGCTGAATTAAGGGGGGAAGAAAAACCAAATGAGGTCACAATGTGCAAGATTGTCGATAAATACAATGGTTCCGTTGATATCTGTGCCCATTGCTGGGGTGGAATCAGGCATCCAAAGGACGGTGGATTTGTTGGCTACGTAGGAGCATTGCCTGAGGGGCTGACCATTAATCACGCTAACATGCTGATG CTTGAGGTCCGGAAAGAAGAGAGAGACTTGAAAGACGAGAATTGCTGACGACTGGAGGAGAGGTGACGCTGCTGTATGTGGGGGAAGAATCTATCAAGTATCAAGTGTCAACTGAATGCATGGCTTGGAATGCTCCACGACGATTGGAAGATTAGCTAGCTAGCGTCTTCTTTATGTTGTTGACTACTTGTTCATTCTGGAATGCTGTTACGGTTGTTCTTTTGTTGTTGTTGTCACACCTGCATCTGCAATTACTCCCCTATGAGGCAGTCGTTAaaaaa ] [-] EMBL CB685269 [ AATAAAGCAACCAAGGGAGTAGCCAAGGATAGCCACATGTTTATCTTGAGGCTTGCTGACAAACAATGTTTCTGGCACGTGTACTTTAGAGCCACTGTTGCTGGCTGTTCAACACCCTTTTTTGCTGAATTAAGGGGGGAAGAAAAACCAAATGAGGTCACAATGTGCAAGATTGTCGATAAATACAATGGTTCCGTTGATATCTGTGCCCATTGCTGGGGTGGAATCAGGCATCCAAAGGACGGTGGATTTGTTGGCTACGTAGGAGCATTGCCTGAGGGGCTGACCATTAATCACGCTAACATGCTGATG CTTGAGGTCCGGAAAGAAGAGAGAGACTTGAAAGACGAGAATTGCTGACGACTGGAGGAGAGGTGACGCTGCTGTATGTGGGGGAAGAATCTATCAAGTATCAAGTGTCAACTGAATGCATGGCTTGGAATGCTCCACGACGATTGGAAGATTAGCTAGCTAGCGTCTTCTTTATGTTGTTGACTACTTGTTCATTCTGGAATGCTGTTACGGTTGTTCTTTTGTTGTTGTTGTCACCCCTGCATCTGCAATTACTCCCCTATGAGGCAGTCGTTATTCCATTGTTTATTAGTAGGCCGATCGGTCAGTCACATATGATCGGTCAGTCCCGCTACTCTCAAAACTTCTTAAAGGAAGGTGTTGCAATG ] [+] EMBL AU100899 [ GACGGTGGATTTGTTGGCTACGTAGGAGCATTNCCTGAGGGGCTGACCATTAATCACGCTAACATGCTGATGNCTTGAGGTCCGGAAAGAAGAGAGAGA TTGAAAGACGAGAATTGCTGACGNCTGGAGGAGAGGTGACGCTGCTGTATGTGGGGGAAGAATCTATCAAGTATCAAGTGTCANCTGAATGCNTGGCTTGGAATGCTCCACGACGATTGGAAGATTNGCTAGCTAGCGTCTTCTTTATGTTGTTGACTACTTGTTCATTCTGGAATGCTGTTACGGTTGTTCTTTTGTTGTTGTTGTCACACCTGCATCTGCAATTACTCCCCTATGAGGCAGTCGTTATTCCATTGTTTATTAGTAGGCCGATCGGTCAGTCACATATGATCGGTCAGTCCCGCTACTCTCAAAACTTATTAAAAGAA GTGTTGCAATGTGTCGTTGGAGCAGTTTTGTGGTAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||