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Oryza sativa
cluster # 10403 cluster # 10403       Sequences # 7       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10403#0 length = 2446 sequences # 6  
 consensus_10403#1 length = 784 sequences # 1  
consensusID : consensus_10403#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2446
fasta sequence 
                              [GCGGCCGCGGCGGTAATGGAGGTGGATATGGAAGCGGAGGGTGCGAGCGGCAAGCTCGGCCACAAGAGGGCGGATCTGGAGAAGCCCACGGAGGAGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACGCCGTCGGAGGATCACCACGACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGACGACGACGACGACGAGTACTACGACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGCTGGGCCCGTTCCTACGGCACCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCTATGCCAAACACAGACATTCCAGTGCTGCCCCCTTCTGCGCAGCCTATGGAAACAATGCAGGTCTTCACGGTGAAGGTGACCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTACGGCGTGGTCGCCGTGCGAGACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGCAGGAACGAATGCCAGACCCTAACTTCGCTGCAGGGCCTCAGCATCAAGATGAGGGACCTAAAGTGAACTTACTCGACATTTATATCTGCCCTAGCAAGTTTCCGGGCTGGCCCAACCTGTGACCACTCATCACGGCCTGGCCCGTCTAGCGCCCTGTCTATAAATTCGACGATGGGAAACCGTAGCTTAGGGTCCCGCTTCCGCCGTCACTTCCCAAAACCTCTCATTCCAGATTTATTATCTTCACCTCGTCGACCCGATGCCTACGCAGCCATTTCCCTGGTCCGGCGACAAGCCTTCCTCGTAGATCGAGATCCCCAAACCTACCTGT----GCGGAGAGGAGGGCGATTTCTGTCGTCATCGCTGGATTCCACTCGCCGTCTCCGTCGCCCTGATTCCACTCACTCGCCACCGCACTTTTTCTGGAGCCACTTCGTCCATTTGAGCGAGGCTTGTAGGTTTTCTGCCATTATTGAGCTTTTCCATGGCCACTGCAAACAATCCAGGTCCCCTTGACTTGGTTCCAGGTTTTTCACCTGAAGACATGGACAACCCCATTCATAATGCTGCCTTATCCTACGTGTCATATGATAGATATGTGTTAGATACCTCTGAAGTGTATTTTGATGATTGCATCCCATTGGAGTCTTATCTGAATATTAGACCAATGGTGACTTCTGATTCGTATCAGTTTCGTTCATTTGGGGAAACTAATCCAAGTGTGACTTATCTGGTTGCAACAGAGTCATGTAAGAAAGTAATCAGAACTATGCTGAAAGGACTAAGGACAAATGAGTTGAGAAATTTGTGTTTTTTGGATTTAAACATTTCAAACATCTTTGTGAGTCCCACGGGAAAAGTTAAGTTCAAGAACATTTCACGTGTATAGTTAGAGATGGACCTTCTAAGAAACAACTATTTGTGTGCTCATCAGATTATCAGGAATCTCTTTCTATCTGAAGACGGAAGTGTGCCTGAAGATATACAGCACCTGCTAAACTTGATCCTTCATGAGTTTGACAAGAGAGAGATATTTCATTTTCATGGGTCATTGGTATCCCTAGCTAATGTGTCACTGTTTTTCAAGTCAATGTATGACCATATCAGATTTGTGATGCCACCAGATGATCTTAGGGCTATCCTAACAAACCTTCCATATGCCGATGTTTGGGAGAGTAAAGTCAAGACCAACCGTATCCTCAAAAAGCCTTATGATTTCAACCCTGACGGCCGTATTGTACCAGCTGACAAACCATCTCAGACATGCCTCAACAAACGTCAGAGGGAATTCTTACATGCACTGGGTCTAACTCCTATTCGAGGACAGAAATCGCTTACCCCTGATCAGATCGCCTTAATTGAAACTCTGTTCTTCTTTGATTTTCTGAGAAATAGGACATCTCACAGGATGGATCCATGGAGGAGTCTGATTTTGGGCTATAATGCTGTGGACTCAGAGTATGCATGTCATGTCCGGTTCCCATTGGTTGTCCCGTATCTGCAGTTGGAGCTGTATAACAGGGGTCAACTGCAGGCACTTCAGTTGGGACATTTATTCTAACTTCTAAGCTATCCAAGTTCCTCAATTTATGAGCGGAAGTCCTTATCAAGCCATTGCTGGACATGATGCAACTTCAATGCAAGAAGATTGGCTGGCTAGGGCCTAACTTTTGGTTAATTTTGCTTCTGTTCTAGTTTCCTTCCTGAACCCCTAGAGGTTGATGATGTCCCAGGGTGTATGTATCCCCTGTGTTTTTTGTCGCTGTAAAACTACACATGCTTGAATTTCTGTCAGCAGAAAAAAGCTACATCTGACTGCAGTTGACAGTTTTATTTCATGTTTATGGGACGCAACTCCATTAGCGCTGCTGGGATGGTTTGTACATGCACACATGTCAAGTCAAAGATATAATTAATATTACCATAAATGATTATACAGAAATAAAGGA]

[+] EMBL CB629170             [GCGGCCGCGGCGGTAATGGAGGTGGATATGGAAGCGGAGGGTGCGAGCGGCAAGCTCGGCCACAAGAGGGCGGATCTGGAGAAGCCCACGGAGGAGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACGCCGTCGGAGGATCACCACGACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGACGACGACGACGACGAGTACTACGACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGCTGGGCCCGTTCCTACGGCACCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCTATGCCAAACACAGACATTCCAGTGCTGCCCCCTTCTGCGCAGCCTATGGAAACAATGCAGGTCTTCACGGTGAAGGTGACCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTACGGCGTGGTCGCCGTGCGAGACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGCAGGAACGAATGCCAGACCCTAACTTCGCTGCAGGGCCTCAGCATCAAGATGAGGGACCTAAAGTGAACTTACTCGACATTTATATCTGCCCTAGCAAGTTTCCGGGCTGGCCCAACCTGTGACCACTCATCACGGCCTGGCCCGTCTAGCGCCCTGTCTATAAATTCGACGATGGGAAACCGTAGCTTAGGGTCCCGCTTCCGCCGTCACTTCCCAAAACCTCTCATTCCAGATTTATTATCTTCACCTCGTCGACCCGATGCCTACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB629172             [GCGGCCGCGGCGGTAATGGAGGTGGATATGGAAGCGGAGGGTGCGAGCGGCAAGCTCGGCCACAAGAGGGCGGATCTGGAGAAGCCCACGGAGGAGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACGCCGTCGGAGGATCACCACGACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGACGACGACGACGACGAGTACTACGACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGCTGGGCCCGTTCCTACGGCACCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCTATGCCAAACACAGACATTCCAGTGCTGCCCCCTTCTGCGCAGCCTATGGAAACAATGCAGGTCTTCACGGTGAAGGTGACCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTACGGCGTGGTCGCCGTGCGAGACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGCAGGAACGAATGCCAGACCCTAACTTCGCTGCAGGGCCTCAGCATCAAGATGAGGGACCTAAAGTGAACTTACTCGACATTTATATCTGCCCTAGCAAGTTTCCGGGCTGGCCCAACCTGTGACCACTCATCACGGCCTGGCCCGTCTAGCGCCCTGTCTATAAATTCGACGATGGGAAACCGTAGCTTAGGGTCCCGCTTCCGCCGTCACTTCCCAAAACCTCTCATTCCAGATTTATTATCTTCACCTCGTCGACCCGATGCCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK101827             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCTTCCGCCGTCACTTCCCAAAACCTCTCGTTCCAGATTTATTATCTTCACCTCGTCGACCCGATGCCTACGCAGCCATTTCCCTGGTCCGGCGACAAGCCTTCCTCGTAGATCGAGATCCCCAAACCTACCTGT    GCGGAGAGGAGGGCGATTTCTGTCGTCATCGCTGGATTCCACTCGCCGTCTCCGTCGCCCTGATTCCACTCACTCGCCACCGCACTTTTTCTGGAGCCACTTCGTCCATTTGAGCGAGGCTTGTAGGTTTTCTGCCATTATTGAGCTTTTCCATGGCCACTGCAAACAATCCAGGTCCCCTTGACTTGGTTCCAGGTTTTTCACCTGAAGACATGGACAACCCCATTCATAATGCTGCCTTATCCTACGTGTCATATGATAGATATGTGTTAGATACCTCTGAAGTGTATTTTGATGATTGCATCCCATTGGAGTCTTATCTGAATATTAGACCAATGGTGACTTCTGATTCGTATCAGTTTCGTTCATTTGGGGAAACTAATCCAAGTGTGACTTATCTGGTTGCAACAGAGTCATGTAAGAAAGTAATCAGAACTATGCTGAAAGGACTAAGGACAAATGAGTTGAGAAATTTGTGTTTTTTGGATTTAAACATTTCAAACATCTTTGTGAGTCCCACGGGAAAAGTTAAGTTCAAGAACATTTCACGTGTATAGTTAGAGATGGACCTTCTAAGAAACAACTATTTGTGTGCTCATCAGATTATCAGGAATCTCTTTCTATCTGAAGACGGAAGTGTGCCTGAAGATATACAGCACCTGCTAAACTTGATCCTTCATGAGTTTGACAAGAGAGAGATATTTCATTTTCATGGGTCATTGGTATCCCTAGCTAATGTGTCACTGTTTTTCAAGTCAATGTATGACCATATCAGATTTGTGATGCCACCAGATGATCTTAGGGCTATCCTAACAAACCTTCCATATGCCGATGTTTGGGAGAGTAAAGTCAAGACCAACCGTATCCTCAAAAAGCCTTATGATTTCAACCCTGACGGCCGTATTGTACCAGCTGACAAACCATCTCAGACATGCCTCAACAAACGTCAGAGGGAATTCTTACATGCACTGGGTCTAACTCCTATTCGAGGACAGAAATCGCTTACCCCTGATCAGATCGCCTTAATTGAAACTCTGTTCTTCTTTGATTTTCTGAGAAATAGGACATCTCACAGGATGGATCCATGGAGGAGCCTGATTTTGGGCTATAATGCTGTGGACTCAGAGTATGCATGTCATGTCCGGTTCCCATTGGTTGTCCCGTATCTGCAGTTGGAGCTGTATAACAGGGGTCAACTGCAGGCACTTCAGTTGGGACATTTATTCTAACTTCTAAGCTATCCAAGTTCCTCAATTTATGAGCGGAAGTCCTTATCAAGCCATTGCTGGACATGATGCAACTTCAATGCAAGAAGATTGGCTGGCTAGGGCCTAACTTTTGGTTAATTTTGCTTCTGTTCTAGTTTCCTTCCTGAACCCCTAGAGGTTGATGATGTCCCAGGGTGTATGTATCCCCTGTG TTTTTGTCGCTGTAAAACTACACATGCTTGAATTTCTGTCAGCAGAAAAAAGCTACATCTGACTGCAGTTGACAGTTTTATTTCATGTTTATGGGACGCAACTCCAT                                                                                         ]
[+] EMBL CF324555             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCGTCACTTCCCAAAACCTCTCGTTCCAGATTTATTATCTTCACCTCGTCGACCCGATGCCTACGCAGCCATTTCCCTGGTCCGGCGACAAGCCTTCCTCGTAGATCGAGATCCCCAAACCTACCTGTGTAGGCGGAGAGGAGGGCGATTTCTGTCGTCATCGCTGGATTCCACTCGCCGTCTCCGTCGCCCTGATTCCACTCACTCGCCACCGCACTTTTTCTGGAGCCACTTCGTCCATTTGAGCGAGGCTTGTAGGTTTTCTGCCATTATTGAGCTTTTCCATGGCCACTGCAAACAATCCAGGTCCCCTTGACTTGGTTCCAGGTTTTTCACCTGAAGACATGGACAACCCCATTCATAATGCTGCCTTATCCTACGTGTCATATGATAGATATGTGTTAGATACCTCTGAAGTGTATTTTGATGATTGCATCCCATTGGAGTCTTATCTGAATATTAGACCAATGGTGACTTCTGATTCGTATCAGTTTCGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB629173             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGGCTATCCTAACAAACCTCCCATATGCCGATGTTTGGGAGAGTAAAGTCAAGACCAACCGTATCCTCAAAAAGCCTTATGATTTCAACCCTGACGGCCGTATTGTACCAGCTGACAAACCATCTCAGACATGCCTCAACAAACGTCAGAGGGAATTCTTACATGCACTGGGTCTAACTCCTATTCGAGGACAGAAATCGCTTACCCCTGATCAGATCGCCTTAATTGAAACTCTGTTCTTCTTTGATTTTCTGAGAAATAGGACATCTCACAGGATGGATCCATGGAGGAGTCTGATTTTGGGCTATAATGCTGTGGACTCAGAGTATGCATGTCATGTCCGGTTCCCATTGGTTGTCCCGTATCTGCAGTTGGAGCTGTATAACAGGGGTCAACTGCAGGCACTTCAGTTGGGACATTTATTCTAACTTCTAAGCTATCCAAGTTCCTCAATTTATGAGCGGAAGTCCTTATCAAGCCATTGCTGGACATGATGCAACTTCAATGCAAGAAGATTGGCTGGCTAGGGCCTAACTTTTGGTTAATTTTGCTTCTGTTCTAGTTTCCTTCCTGAACCCCTAGAGGTTGATGATGTCCCAGGGTGTATGTATCCCCTGTGTTTTTTGTCGCTGTAAAACTACACATGCTTGAATTTCTGTCAGCAGAAAAAAGCTACATCTGACTGCAGTTGACAGTTTTATTTCATGTTTATGGGACGCAACTCCATTAGCGCTGCTGGGATGGTTTGTACATGCACACATGTCAAGTCAAAGATATAATTAATATTACCATAAATGATTATACAGAAATAAAGGA]
[-] EMBL CB629171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AACAAACCTTCCATATGCCGATGTTTGGGAGAGTAAAGTCAAGACCAACCGTATCCTCAAAAAGCCTTATGATTTCAACCCTGACGGCCGTATTGTACCAGCTGACAAACCATCTCAGACATGCCTCAACAAACGTCAGAGGGAATTCTTACATGCACTGGGTCTAACTCCTATTCGAGGACAGAAATCGCTTACCCCTGATCAGATCGCCTTAATTGAAACTCTGTTCTTCTTTGATTTTCTGAGAAATAGGACATCTCACAGGATGGATCCATGGAGGAGTCTGATTTTGGGCTATAATGCTGTGGACTCAGAGTATGCATGTCATGTCCGGTTCCCATTGGTTGTCCCGTATCTGCAGTTGGAGCTGTATAACAGGGGTCAACTGCAGGCACTTCAGTTGGGACATTTATTCTAACTTCTAAGCTATCCAAGTTCCTCAATTTATGAGCGGAAGTCCTTATCAAGCCATTGCTGGACATGATGCAACTTCAATGCAAGAAGATTGGCTGGCTAGGGCCTAACTTTTGGTTAATTTTGCTTCTGTTCTAGTTTCCTTCCTGAACCCCTAGAGGTTGATGATGTCCCAGGGTGTATGTATCCCCTGTGTTTTTTGTCGCTGTAAAACTACACATGCTTGAATTTCTGTCAGCAGAAAAAAGCTACATCTGACTGCAGTTGACAGTTTTATTTCATGTTTATGGGACGCAACTCCATTAGCGCTGCTGGGATGGTTTGTACATGCACACATGTCAAGTCATGAATATAATTAATATTACCATAAATG                   ]




>consensus_10403#0
GCGGCCGCGGCGGTAATGGAGGTGGATATGGAAGCGGAGGGTGCGAGCGGCAAGCTCGGC
CACAAGAGGGCGGATCTGGAGAAGCCCACGGAGGAGGAGAGAGCTTCTAACGGCGGCGGC
GACGCCGCCAAGACGCCGTCGGAGGATCACCACGACAGTGCCCGCCGCCGCGCCATGGCG
ATGGAGAATGACGACGACGACGACGACGAGTACTACGACGAACCCCTTCCGAATCCCTTG
GACGCCTACCGCCAGAGCTGGGCCCGTTCCTACGGCACCAATGGCGCCACCTTCGAGGAC
GAGACGGATCTCCCTCCTATGCCAAACACAGACATTCCAGTGCTGCCCCCTTCTGCGCAG
CCTATGGAAACAATGCAGGTCTTCACGGTGAAGGTGACCCAGATCACCGGCGGCCTCCGG
TGGCCGCTCGGCGTCTACGGCGTGGTCGCCGTGCGAGACTCCATGGACCACAAGCGCAAC
GTCCTCTTCCGCCGCGGCAGGAACGAATGCCAGACCCTAACTTCGCTGCAGGGCCTCAGC
ATCAAGATGAGGGACCTAAAGTGAACTTACTCGACATTTATATCTGCCCTAGCAAGTTTC
CGGGCTGGCCCAACCTGTGACCACTCATCACGGCCTGGCCCGTCTAGCGCCCTGTCTATA
AATTCGACGATGGGAAACCGTAGCTTAGGGTCCCGCTTCCGCCGTCACTTCCCAAAACCT
CTCATTCCAGATTTATTATCTTCACCTCGTCGACCCGATGCCTACGCAGCCATTTCCCTG
GTCCGGCGACAAGCCTTCCTCGTAGATCGAGATCCCCAAACCTACCTGTGCGGAGAGGAG
GGCGATTTCTGTCGTCATCGCTGGATTCCACTCGCCGTCTCCGTCGCCCTGATTCCACTC
ACTCGCCACCGCACTTTTTCTGGAGCCACTTCGTCCATTTGAGCGAGGCTTGTAGGTTTT
CTGCCATTATTGAGCTTTTCCATGGCCACTGCAAACAATCCAGGTCCCCTTGACTTGGTT
CCAGGTTTTTCACCTGAAGACATGGACAACCCCATTCATAATGCTGCCTTATCCTACGTG
TCATATGATAGATATGTGTTAGATACCTCTGAAGTGTATTTTGATGATTGCATCCCATTG
GAGTCTTATCTGAATATTAGACCAATGGTGACTTCTGATTCGTATCAGTTTCGTTCATTT
GGGGAAACTAATCCAAGTGTGACTTATCTGGTTGCAACAGAGTCATGTAAGAAAGTAATC
AGAACTATGCTGAAAGGACTAAGGACAAATGAGTTGAGAAATTTGTGTTTTTTGGATTTA
AACATTTCAAACATCTTTGTGAGTCCCACGGGAAAAGTTAAGTTCAAGAACATTTCACGT
GTATAGTTAGAGATGGACCTTCTAAGAAACAACTATTTGTGTGCTCATCAGATTATCAGG
AATCTCTTTCTATCTGAAGACGGAAGTGTGCCTGAAGATATACAGCACCTGCTAAACTTG
ATCCTTCATGAGTTTGACAAGAGAGAGATATTTCATTTTCATGGGTCATTGGTATCCCTA
GCTAATGTGTCACTGTTTTTCAAGTCAATGTATGACCATATCAGATTTGTGATGCCACCA
GATGATCTTAGGGCTATCCTAACAAACCTTCCATATGCCGATGTTTGGGAGAGTAAAGTC
AAGACCAACCGTATCCTCAAAAAGCCTTATGATTTCAACCCTGACGGCCGTATTGTACCA
GCTGACAAACCATCTCAGACATGCCTCAACAAACGTCAGAGGGAATTCTTACATGCACTG
GGTCTAACTCCTATTCGAGGACAGAAATCGCTTACCCCTGATCAGATCGCCTTAATTGAA
ACTCTGTTCTTCTTTGATTTTCTGAGAAATAGGACATCTCACAGGATGGATCCATGGAGG
AGTCTGATTTTGGGCTATAATGCTGTGGACTCAGAGTATGCATGTCATGTCCGGTTCCCA
TTGGTTGTCCCGTATCTGCAGTTGGAGCTGTATAACAGGGGTCAACTGCAGGCACTTCAG
TTGGGACATTTATTCTAACTTCTAAGCTATCCAAGTTCCTCAATTTATGAGCGGAAGTCC
TTATCAAGCCATTGCTGGACATGATGCAACTTCAATGCAAGAAGATTGGCTGGCTAGGGC
CTAACTTTTGGTTAATTTTGCTTCTGTTCTAGTTTCCTTCCTGAACCCCTAGAGGTTGAT
GATGTCCCAGGGTGTATGTATCCCCTGTGTTTTTTGTCGCTGTAAAACTACACATGCTTG
AATTTCTGTCAGCAGAAAAAAGCTACATCTGACTGCAGTTGACAGTTTTATTTCATGTTT
ATGGGACGCAACTCCATTAGCGCTGCTGGGATGGTTTGTACATGCACACATGTCAAGTCA
AAGATATAATTAATATTACCATAAATGATTATACAGAAATAAAGGA

consensusID : consensus_10403#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 784
fasta sequence 
                              [ACAAACCCTAAACCCGCCGGCGGCGTGCGGCGGCGGCGGTAATGGAGGTGGATATGGAAGCGGAGGGTGCGAGCGGCGAGCTCGGCCACAAGAGGGCGGATCTGGAGAAGCCCACGGAGGAGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACGCCGTCGGAGGATCACCACGACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGACGACGACGACGAGTACTACGACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGCTGGGCCCGTTCCTACGGCACCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCTATGCCAAACACAGACATTCCAGTGCTGCCCCCTTCTGCGCAGCCTATGGAGACAATGCAGGTCTTCACGGTGAAGGTGACCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTACGGCGTGGTCGCCGTGCGAGACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGCAGGAACGAATGCCAGACCCTAACTTCGCTGCAGGCATGTGCAAATTGTTCCTACCCCATTATCTTATAAAAGTTGCTCGGTATCAAAATTTACGACTTAAACATGTTGCGTTGGAATATATGTCTTAGAAATATAAGTTAATTGTTTGTTTGGAATCACAGTAAAAGATATTCATTTGGATGTTAACGTGATATTCGATTAAAGTTAACATTAACATTCAGGGGTTTGTCCGCCGCTGACTAGTGGTGGTTTACAGGCCGCCA]

[+] EMBL AK064600             [ACAAACCCTAAACCCGCCGGCGGCGTGCGGCGGCGGCGGTAATGGAGGTGGATATGGAAGCGGAGGGTGCGAGCGGCGAGCTCGGCCACAAGAGGGCGGATCTGGAGAAGCCCACGGAGGAGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACGCCGTCGGAGGATCACCACGACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGACGACGACGACGAGTACTACGACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGCTGGGCCCGTTCCTACGGCACCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCTATGCCAAACACAGACATTCCAGTGCTGCCCCCTTCTGCGCAGCCTATGGAGACAATGCAGGTCTTCACGGTGAAGGTGACCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTACGGCGTGGTCGCCGTGCGAGACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGCAGGAACGAATGCCAGACCCTAACTTCGCTGCAGGCATGTGCAAATTGTTCCTACCCCATTATCTTATAAAAGTTGCTCGGTATCAAAATTTACGACTTAAACATGTTGCGTTGGAATATATGTCTTAGAAATATAAGTTAATTGTTTGTTTGGAATCACAGTAAAAGATATTCATTTGGATGTTAACGTGATATTCGATTAAAGTTAACATTAACATTCAGGGGTTTGTCCGCCGCTGACTAGTGGTGGTTTACAGGCCGCCA]




>consensus_10403#1
ACAAACCCTAAACCCGCCGGCGGCGTGCGGCGGCGGCGGTAATGGAGGTGGATATGGAAG
CGGAGGGTGCGAGCGGCGAGCTCGGCCACAAGAGGGCGGATCTGGAGAAGCCCACGGAGG
AGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACGCCGTCGGAGGATCACCACG
ACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGACGACGACGACGAGTACTACG
ACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGCTGGGCCCGTTCCTACGGCA
CCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCTATGCCAAACACAGACATTC
CAGTGCTGCCCCCTTCTGCGCAGCCTATGGAGACAATGCAGGTCTTCACGGTGAAGGTGA
CCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTACGGCGTGGTCGCCGTGCGAG
ACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGCAGGAACGAATGCCAGACCC
TAACTTCGCTGCAGGCATGTGCAAATTGTTCCTACCCCATTATCTTATAAAAGTTGCTCG
GTATCAAAATTTACGACTTAAACATGTTGCGTTGGAATATATGTCTTAGAAATATAAGTT
AATTGTTTGTTTGGAATCACAGTAAAAGATATTCATTTGGATGTTAACGTGATATTCGAT
TAAAGTTAACATTAACATTCAGGGGTTTGTCCGCCGCTGACTAGTGGTGGTTTACAGGCC
GCCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10403#0      --------------------------GCGGCCGCGGCGGTAATGGAGGTGGATATGGAAG 34
consensus_10403#1      ACAAACCCTAAACCCGCCGGCGGCGTGCGGCGGCGGCGGTAATGGAGGTGGATATGGAAG 60
                                                 ***** ****************************

consensus_10403#0      CGGAGGGTGCGAGCGGCAAGCTCGGCCACAAGAGGGCGGATCTGGAGAAGCCCACGGAGG 94
consensus_10403#1      CGGAGGGTGCGAGCGGCGAGCTCGGCCACAAGAGGGCGGATCTGGAGAAGCCCACGGAGG 120
                       ***************** ******************************************

consensus_10403#0      AGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACGCCGTCGGAGGATCACCACG 154
consensus_10403#1      AGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACGCCGTCGGAGGATCACCACG 180
                       ************************************************************

consensus_10403#0      ACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGACGACGACGACGACGAGTACT 214
consensus_10403#1      ACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGACGACGACGACGA---GTACT 237
                       ****************************************************   *****

consensus_10403#0      ACGACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGCTGGGCCCGTTCCTACG 274
consensus_10403#1      ACGACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGCTGGGCCCGTTCCTACG 297
                       ************************************************************

consensus_10403#0      GCACCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCTATGCCAAACACAGACA 334
consensus_10403#1      GCACCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCTATGCCAAACACAGACA 357
                       ************************************************************

consensus_10403#0      TTCCAGTGCTGCCCCCTTCTGCGCAGCCTATGGAAACAATGCAGGTCTTCACGGTGAAGG 394
consensus_10403#1      TTCCAGTGCTGCCCCCTTCTGCGCAGCCTATGGAGACAATGCAGGTCTTCACGGTGAAGG 417
                       ********************************** *************************

consensus_10403#0      TGACCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTACGGCGTGGTCGCCGTGC 454
consensus_10403#1      TGACCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTACGGCGTGGTCGCCGTGC 477
                       ************************************************************

consensus_10403#0      GAGACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGCAGGAACGAATGCCAGA 514
consensus_10403#1      GAGACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGCAGGAACGAATGCCAGA 537
                       ************************************************************

consensus_10403#0      CCCTAACTTCGCTGCAGGGCCTCAGCATCAAGATGAGGGACCTAAAGTGAACTTACTCGA 574
consensus_10403#1      CCCTAACTTCGCTGCAGGC-------------ATGTG-----CAAATTGTTCCTACCCCA 579
                       ******************              *** *      *** **  * *** * *

consensus_10403#0      CATTTATATCTGCCCTAGCAAGTTTCCGGGCTGGCCCAACCTGTGACC-ACTCATCACGG 633
consensus_10403#1      T---------TATCTTATAAAAGTTGCTCGGTATCAAAATTTACGACTTAAACATGTTGC 630
                                 *  * **  **  ** *  * *  *  **  *  ***  *  ***   * 

consensus_10403#0      CCTGGCCCGTCTAGCGCCCTGTCTATAAATTCGACGATGG---GAAACCGTAGCTTAGGG 690
consensus_10403#1      GTTGGAATATAT-GTCTTAGAAATATAAGTTAATTGTTTGTTTGGAATCACAGTAAAAGA 689
                         ***    * * *         ***** **    * * *   * ** *  **   * * 

consensus_10403#0      TCCCGCTTCCGCCGTCA-CTTCCCAAAACCTCTCATTCCAGATTTATTATCTTCACCTCG 749
consensus_10403#1      TATTCATTTGGATGTTAACGTGATATTCGATTAAAGTTAACATTAACATTCAGGGGTTTG 749
                       *     **  *  ** * * *   *     *   * *  * *** *   **      * *

consensus_10403#0      TCGACCCGATGCCTACGCAGCCATTTCCCTGGTCCGGCGACAAGCCTTCCTCGTAGATCG 809
consensus_10403#1      TCCGCC-GCTGACTA-GTGGTGGTTTAC--AGGCCGCCA--------------------- 784
                       **  ** * ** *** *  *   *** *   * *** *                      

consensus_10403#0      AGATCCCCAAACCTACCTGTGCGGAGAGGAGGGCGATTTCTGTCGTCATCGCTGGATTCC 869
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      ACTCGCCGTCTCCGTCGCCCTGATTCCACTCACTCGCCACCGCACTTTTTCTGGAGCCAC 929
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TTCGTCCATTTGAGCGAGGCTTGTAGGTTTTCTGCCATTATTGAGCTTTTCCATGGCCAC 989
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TGCAAACAATCCAGGTCCCCTTGACTTGGTTCCAGGTTTTTCACCTGAAGACATGGACAA 1049
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      CCCCATTCATAATGCTGCCTTATCCTACGTGTCATATGATAGATATGTGTTAGATACCTC 1109
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TGAAGTGTATTTTGATGATTGCATCCCATTGGAGTCTTATCTGAATATTAGACCAATGGT 1169
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      GACTTCTGATTCGTATCAGTTTCGTTCATTTGGGGAAACTAATCCAAGTGTGACTTATCT 1229
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      GGTTGCAACAGAGTCATGTAAGAAAGTAATCAGAACTATGCTGAAAGGACTAAGGACAAA 1289
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TGAGTTGAGAAATTTGTGTTTTTTGGATTTAAACATTTCAAACATCTTTGTGAGTCCCAC 1349
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      GGGAAAAGTTAAGTTCAAGAACATTTCACGTGTATAGTTAGAGATGGACCTTCTAAGAAA 1409
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      CAACTATTTGTGTGCTCATCAGATTATCAGGAATCTCTTTCTATCTGAAGACGGAAGTGT 1469
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      GCCTGAAGATATACAGCACCTGCTAAACTTGATCCTTCATGAGTTTGACAAGAGAGAGAT 1529
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      ATTTCATTTTCATGGGTCATTGGTATCCCTAGCTAATGTGTCACTGTTTTTCAAGTCAAT 1589
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      GTATGACCATATCAGATTTGTGATGCCACCAGATGATCTTAGGGCTATCCTAACAAACCT 1649
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TCCATATGCCGATGTTTGGGAGAGTAAAGTCAAGACCAACCGTATCCTCAAAAAGCCTTA 1709
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TGATTTCAACCCTGACGGCCGTATTGTACCAGCTGACAAACCATCTCAGACATGCCTCAA 1769
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      CAAACGTCAGAGGGAATTCTTACATGCACTGGGTCTAACTCCTATTCGAGGACAGAAATC 1829
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      GCTTACCCCTGATCAGATCGCCTTAATTGAAACTCTGTTCTTCTTTGATTTTCTGAGAAA 1889
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TAGGACATCTCACAGGATGGATCCATGGAGGAGTCTGATTTTGGGCTATAATGCTGTGGA 1949
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      CTCAGAGTATGCATGTCATGTCCGGTTCCCATTGGTTGTCCCGTATCTGCAGTTGGAGCT 2009
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      GTATAACAGGGGTCAACTGCAGGCACTTCAGTTGGGACATTTATTCTAACTTCTAAGCTA 2069
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TCCAAGTTCCTCAATTTATGAGCGGAAGTCCTTATCAAGCCATTGCTGGACATGATGCAA 2129
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      CTTCAATGCAAGAAGATTGGCTGGCTAGGGCCTAACTTTTGGTTAATTTTGCTTCTGTTC 2189
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TAGTTTCCTTCCTGAACCCCTAGAGGTTGATGATGTCCCAGGGTGTATGTATCCCCTGTG 2249
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TTTTTTGTCGCTGTAAAACTACACATGCTTGAATTTCTGTCAGCAGAAAAAAGCTACATC 2309
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TGACTGCAGTTGACAGTTTTATTTCATGTTTATGGGACGCAACTCCATTAGCGCTGCTGG 2369
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      GATGGTTTGTACATGCACACATGTCAAGTCAAAGATATAATTAATATTACCATAAATGAT 2429
consensus_10403#1      ------------------------------------------------------------
                                                                                   

consensus_10403#0      TATACAGAAATAAAGGA 2446
consensus_10403#1      -----------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)