cluster # 10411

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Oryza sativa
cluster # 10411 cluster # 10411 Sequences # 7 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10411#0 length = 506 sequences # 7

consensusID : consensus_10411#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 506
fasta sequence

                              [AAAGCAAGATAGCAGA-GCTAAGCAAAAAAAGATACCTTAAAAGCCCGTGCTCAATCAGCCAAGACTTCAACAAAAGTGAGCGAAATGCTGGGGAATGTAAATACTAGTGGTGCTCTTTCAGCATTTGAGAAAATGGA-GGAAAAAGTTATGGCAATGGAGTCCCAAGCAGAGGCACTC-GGT-CAGTTGGCAACTGATGATCTTGAAGGAAAGTTTGCATTGCTTGAGACTTCATCGGTTGATGATGACCTTGCACAAATGAAAAAGGAAATTTCTGGAAGCTCTTCGAAAGGAG-AACTTCCT-CCAGGTAGAACGGCAGTCAGCAATTCAGGAGCAGCGCGCCCTTTCCGAGACATCGAGATTGAGAATGAGCTAAATGAGCTGCGGAAGAAGGCCAATGAATATTAGATTATGCAGTTTCCTTGTCCCTGCACCAGGCCTGACGAATCCTTTAGACTGAAGAACCCCGGGAAGATATAGGATGGTCTTCAGGTTTCTCCAATGCCCCT]

[+] EMBL C72033               [AAAGCAAGATAGCAGAGGCTAAGCAAAAAAAGATACCTTAAAAGCCCGTGCTCAATCAGCCAAGACTTCAACAAAAGTGAGCGAAATGCTGGGGAATGTAAATACTAGTGGTGCTCTTTCAGCATTTGAGAAAATGGANGGAAAAAGTTATGGCAATGGAGTCCCAAGCAGAGGCACTCGGGTCCAGTTGGCACCTGATGNTCTTGAAGGAAAGT                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU165409             [          AGCAGA GCTAAGCAAAAAAAGATNCCTTAAAAGCCCGTGCTCAATCAGCCAAGACTTCAACAAAAGTGAGCGAAATGCTGGGGAATGTAAATACTAGTGGTGCTCTTTCAGCATTTGAGAAAATGGA GGAAAAAGTTATGGCAATGGAGTCCCAAGCAGAGGCACTC GGT CAGTTGGCAACTGATGATCTTGAAGGAAAGTTTGCATTGCTTGAGACTTCATCGGTTGATGATGACCTTGCACAAATGAAAAAGGAAATTTCTGGAAGCTCTTCGAAAGGAG AACTTCCT CCAGGTAGAACGGCAGTCAGCAATTCAGGAGCAGCGCGCCCTTTCCGAGACATCGAGATTGAGAATGAGCTAAATGAGCTGCGGAAGAAGGCCAATGAATATTAGATTATGCAGTTTCCTTGTCCCTGCACCAGGCCTGACGAATCCTTTAGACTGAAGAACCCCGGGAAGATATAGGATGGTCTTCAGGTTTCTCCAATGCCCCT]
[+] EMBL OSEN7714             [                                  ACCTTAAAAGCCCGTGCTCAATCAGCCAAGACTTCAACAAAAGTGAGCGAAATGCTGGGGAATGTAAATACTAGTGGTGCTCTTTCAGCATTTGAGAAAATGGA GGAAAAAGTTATGGCAATGGAGTCCCAAGCAGAGGCACTC GGT CAGTTGGCAACTGATGATCTTGAAGGAAAGTTTGCATTGCTTGAGACTTCATCAGTTGATGATGACCTTGCACAAATGAAAAAGGAAATTACTGGAAGCTCTTCGAAAGGAG AACTTCCT CCAGGTAGAACGGCAGTCAGCAATTCAGGAGCAGCGCGTCCTTTCCTAGACATCGAGATTGAGAATCAGCTAAATAAGCTTCGG AGAAGTCCAATG ATATTAGATTATGCAGTTTCCTTGT CCTTCACCAGGgttgcc                                                                 ]
[+] EMBL CF324627             [                                                gGCTCAATCAGCCAAGACTTCAACAAAAGTGAGCGAAATGCTGGGGAATGTAAATACTAGTGGTGCTCTTTCAGCATTTGAGAAAATGGA GGAAAAAGTTATGGCAATGGAGTCCCAAGCAGAGGCACTC GGT CAGTTGGCAACTGATGATCTTGAAGGAAAGTTTGCATTGCTTGAGACTTCATCGGTTGATGATGACCTTGCACAAATGAAAAAGGAAATTTCTGGAAGCTCTTCGAAAGGAG AACTTCCT CCAGGTAGAACGGCAGTCAGCAATTCAGGAGCAGCGCGCCCTTTCCGAGACATCGAGATTGAGAATGAGCTAAATGAGCTGCGGAAGAAGGCCAATGAATATTAGATTATGCAGTTTCCTTGTCCCTGCACCAGGCCTGACGAATCCTTTAGACTGAAGAACCCCGGGAAGATATAGGATGGTCTTCAGGTTTCTCCAATGCCCCT]
[+] EMBL AU056346             [                                                                                                                                                                                                AACTGATGATCTTGAAGGAAAGTTTGCATTGCTTGAGACTTCATCGGTTGATGATGACCTTGCACAAATGAAAAAGGAAATTTCTGGAAGCTCTTCGAAAGGAG AACTTCCT CCAGGTAGAACGGCAGTCAGCAATTCAGGNGCNGCGCGCCCTTTCCGAGACATCGAGATTGAGAATGAGCTAAATGAGCTGCGGAAGAAGGCCAATGAATATTAGATTATGCAGTTTCCTTGTCCCTGCACCAGGCCTGACGAATCCTTTAGACTGAAGAACCCCGGGAAGATATAGGATGGTCTTCAGGTTTCTCCAATGCCCCT]
[+] EMBL C98752               [                                                                                                                                                                                                                                                                                 TTCTGGAAGCTNTTCG AAGGAGAAACTTCCTNCCAGGTAGAACGGCANTCAGCAATTCAGGAGCAGCGCGCCCTTTCCGAGACATCGNGATTGAGAATGAGCTAAATGAGCTTCGGAAGAAGGCCAATGAATATTAGATTATGCNGTTTCCTTGTCCCTGCACCAGGCCTGACGAATCCTTTAGACTGAAGAACCCCGGGAAGATATAGGATGGTCTTCAGGTTTCTCCAATGCCCCT]
[+] EMBL AU056556             [                                                                                                                                                                                                                                                                                                                                                            TTCCGAGACATCGAGATTGAGNATGAGCTAAATGAGCTGCGGAAGAAGGCCAATGAATATTAGATTATGCNGTTTCCTTGTCCCTGCACCAGGCCTGACGAATCCTTTAGACTGAAGAACCCCGGGAAGATATAGGATGGTCTTCAGGTTTCTCCAATGCCCCT]




>consensus_10411#0
AAAGCAAGATAGCAGAGCTAAGCAAAAAAAGATACCTTAAAAGCCCGTGCTCAATCAGCC
AAGACTTCAACAAAAGTGAGCGAAATGCTGGGGAATGTAAATACTAGTGGTGCTCTTTCA
GCATTTGAGAAAATGGAGGAAAAAGTTATGGCAATGGAGTCCCAAGCAGAGGCACTCGGT
CAGTTGGCAACTGATGATCTTGAAGGAAAGTTTGCATTGCTTGAGACTTCATCGGTTGAT
GATGACCTTGCACAAATGAAAAAGGAAATTTCTGGAAGCTCTTCGAAAGGAGAACTTCCT
CCAGGTAGAACGGCAGTCAGCAATTCAGGAGCAGCGCGCCCTTTCCGAGACATCGAGATT
GAGAATGAGCTAAATGAGCTGCGGAAGAAGGCCAATGAATATTAGATTATGCAGTTTCCT
TGTCCCTGCACCAGGCCTGACGAATCCTTTAGACTGAAGAACCCCGGGAAGATATAGGAT
GGTCTTCAGGTTTCTCCAATGCCCCT

clustalw multiple alignements is not computed in this case