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Oryza sativa
cluster # 10413 cluster # 10413       Sequences # 7       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10413#0 length = 2922 sequences # 6  
 consensus_10413#1 length = 730 sequences # 1  
consensusID : consensus_10413#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2922
fasta sequence 
                              [CCATTCTTCCTCTCCTCCTCCCCCCGCTTCTCCTCCCCACCTCCGCCTCCGCCTCCGATCCGCCGCCGCCGTCGGCGACCGCCGGAGCCGCGTGTAGCACGCCGTCTCACCCCCGCCCCCCCCCCCCAATCGCTCTCCATTTCCCTCCCCTTTCGCTCGCTGCTGCTCCCGCACGCCGCCGGTGCCCGGATCCCGCTGGCCGACGTCGCCCCTGCCGCCGAGCTGCCTCCTCCTCCCCTTCTCTCGCCGCTCGAAATGATGTTGGAGCTCTGGTGGTAATTAACCATGGATGCAATGGAGGCCGAGGAAGGTCCTTTTCTGGCTAATGATGCTAAGTTGCATGCCGGAATGTACAGAGCATTTCATCCTGCGGTCTCAAAACTTGTAGCGATTTTCCCTTTCATTGAAGCATCAAGACCCAGAAGCAAATCTGGCATACAGGCGCTATGCTCTCTACATGTAGCTCTAGATAAAGCCAAAGGTCTTCTTCAACATTGTGCAGATTGCAGCAGGCTCTACTTGGCCATAACTGCAGAAACTGTGCTTTTGAAATTTGAGAAAGCAAGAACCCAACTTCAGGAGAGTCTTAGACGCGTGGAGGGCATAGTAACAGAAGAAATTGGTTGTAAGATTGTAGAGATTATTGCTGAGTTGGAAGAAGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTCCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATGGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTGAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGATACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAATATTAGGCATGGAGGACATGTATGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAATTCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTAGTGGTCCAAGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACTGATGTACGACCCAGTTATCATTTCATCAGGGCAAACTTATGAGCGTGTTTGCATTGAGAAATGGTTTAATGATGGTCACAGCACCTGTCCAAAGACTCAGCAGCAATTATCTCACCTGTCTTTGACTCCAAATTACTGTGTTAAGGCCCTAATTGCCAGCTGGTGTGAGCAGAATGATTTTCCTGTTCCTGATGGTCCACCAGGATCCTTCGATGTAAATTGGAGACTTGCTTTATCTGACTCCGAAGCGACTGGCTGCGTGTCTCTTGAAAGTTTTGACTCTATCAACGTGAAGAGTGTCAAGGTAGTTCCATTGGACAACGTGAGAAAAGAAGAGCCAGCAAACAACGAATCGGGAACATTGGACGACAGCTCTTGTTATGATTTCGATATGAATGAGGGGTACCGAAACTTACTGCTAATGCTTCATGAAAAAACCAACTTACACATCCAGTGCAGGTTGGTTGAGCAGATAAGATATCTTCTGAAAGATGATGAGGAAGCTAGAATCCAGATGGGCTCAAATGGGTTTGCTGAGGCACTAGTTCAGTTCTTGAGGAACGCTGTGCAAGATGGAAATGAGAAGGCACAGGAAATTGGTGCCATGGCTCTTTTTAACCTTGCTGTCAACAATAACAGGAACAAGGGACTTTTATTGTCTGCTGGAGTAATCGATCAACTTGAGCAGATGATATCAAATCCACGCCTATCTGCTCCAGCCACGGCACTATACCTTAACCTTTCCTGCCTACCTGAGGCAAAGAACATCATTGGTTCGAGCCAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCCCGCGACACAAAAGGCAGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCCAACCACCAGGCCAGCGTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTTCGGAGTCCCTGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCAGCCTTGCGGCAACCCAAGCTGGCAGAAAAGATAT-CATGTCCACCCC--AGGTCT-GATCAGCA-CCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCCTTTTGGTGATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGC-AGGAAGGAGTGGTGCCTTCC-TTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACGGCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACTCTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAGCAGATTTTTGAGCTGAGTTTGATCAGTGGATATGTACATCTTTTCTTGTTCCATGTTTCTCTTGATCTTTCTTTTTTTTTTGCCTTCTTTGTTGTTTCCTTGTGTAAAGTAAAACTATCTTCCCCCCCTTCTCGGTGGGGTGATGTAGGCCATTTCCTCTTTGTTTTTCTTTGCCAAGATATGTGCATAGCTCATCTTTCACTCTACTTAACAAGTTCAGATCAGATCAAAAAA]

[+] EMBL AK101205             [CCATTCTTCCTCTCCTCCTCCCCCCGCTTCTCCTCCCCACCTCCGCCTCCGCCTCCGATCCGCCGCCGCCGTCGGCGACCGCCGGAGCCGCGTGTAGCACGCCGTCTCACCCCCGCCCCCCCCCCCCAATCGCTCTCCATTTCCCTCCCCTTTCGCTCGCTGCTGCTCCCGCACGCCGCCGGTGCCCGGATCCCGCTGGCCGACGTCGCCCCTGCCGCCGAGCTGCCTCCTCCTCCCCTTCTCTCGCCGCTCGAAATGATGTTGGAGCTCTGGTGGTAATTAACCATGGATGCAATGGAGGCCGAGGAAGGTCCTTTTCTGGCTAATGATGCTAAGTTGCATGCCGGAATGTACAGAGCATTTCATCCTGCGGTCTCAAAACTTGTAGCGATTTTCCCTTTCATTGAAGCATCAAGACCCAGAAGCAAATCTGGCATACAGGCGCTATGCTCTCTACATGTAGCTCTAGATAAAGCCAAAGGTCTTCTTCAACATTGTGCAGATTGCAGCAGGCTCTACTTGGCCATAACTGCAGAAACTGTGCTTTTGAAATTTGAGAAAGCAAGAACCCAACTTCAGGAGAGTCTTAGACGCGTGGAGGGCATAGTAACAGAAGAAATTGGTTGTAAGATTGTAGAGATTATTGCTGAGTTGGAAGAAGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTCCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATGGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTGAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGATACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAATATTAGGCATGGAGGACATGTATGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAATTCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTAGTGGTCCAAGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACTGATGTACGACCCAGTTATCATTTCATCAGGGCAAACTTATGAGCGTGTTTGCATTGAGAAATGGTTTAATGATGGTCACAGCACCTGTCCAAAGACTCAGCAGCAATTATCTCACCTGTCTTTGACTCCAAATTACTGTGTTAAGGCCCTAATTGCCAGCTGGTGTGAGCAGAATGATTTTCCTGTTCCTGATGGTCCACCAGGATCCTTCGATGTAAATTGGAGACTTGCTTTATCTGACTCCGAAGCGACTGGCTGCGTGTCTCTTGAAAGTTTTGACTCTATCAACGTGAAGAGTGTCAAGGTAGTTCCATTGGACAACGTGAGAAAAGAAGAGCCAGCAAACAACGAATCGGGAACATTGGACGACAGCTCTTGTTATGATTTCGATATGAATGAGGGGTACCGAAACTTACTGCTAATGCTTCATGAAAAAACCAACTTACACATCCAGTGCAGGTTGGTTGAGCAGATAAGATATCTTCTGAAAGATGATGAGGAAGCTAGAATCCAGATGGGCTCAAATGGGTTTGCTGAGGCACTAGTTCAGTTCTTGAGGAACGCTGTGCAAGATGGAAATGAGAAGGCACAGGAAATTGGTGCCATGGCTCTTTTTAACCTTGCTGTCAACAATAACAGGAACAAGGGACTTTTATTGTCTGCTGGAGTAATCGATCAACTTGAGCAGATGATATCAAATCCACGCCTATCTGCTCCAGCCACGGCACTATACCTTAACCTTTCCTGCCTACCTGAGGCAAAGAACATCATTGGTTCGAGCCAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCCCGCGACACAAAAGGCAGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCCAACCACCAGGCCAGCGTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTTCGGAGTCCCTGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCAGCCTTGCGGCAACCCAAGCTGGCAGAAAAGATAT CATGTCCACCCC  AGGTCT GATCAGCA CCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCCTTTTGGTGATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGC AGGAAGGAGTGGTGCCTTCC TTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACGGCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACTCTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAGCAGATTTTTGAGCTGAGTTTGATCAGTGGATATGTACATCTTTTCTTGTTCCATGTTTCTCTTGATCTTTCTTTTTTTTTTGCCTTCTTTGTTGTTTCCTTGTGTAAAGTAAAACTATCTTCCCCCCCTTCTCGGTGGGGTGATGTAGGCCATTTCCTCTTTGTTTTTCTTTGCCAAGATATGTGCATAGCTCATCTTTCACTCTACTTAACAAGTTC                ]
[+] EMBL CB679893             [                                                                                                                                                                                                                                                                             CTGGTGGTAATTAACCATGGATGCAATGGAGGCCGAGGAAGGTCCTTTTCTGGCTAATGATGCTAAGTTGCATGCCGGAATGTACAGAGCATTTCATCCTGCGGTCTCAAAACTTGTAGCGATTTTCCCTTTCATTGAAGCATCAAGACCCAGAAGCAAATCTGGCATACAGGCGCTATGCTCTCTACATGTAGCTCTAGATAAAGCCAAAGGTCTTCTTCAACATTGTGCAGATTGCAGCAGGCTCTACTTGGCCATAACTGCAGAAACTGTGCTTTTGAAATTTGAGAAAGCAAGAACCCAACTTCAGGAGAGTCTTAGACGCGTGGAGGGCATAGTAACAGAAGAAATTGGTTGTAAGATTGTAGAGATTATTGCTGAGTTGGAAGAAGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTCCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATGGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTGAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGATACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAATATTAGGCATGGAGGACATGTATGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK065658             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAAGGCACAGGAAATTGGTGCCATGGCTCTTTTTAACCTTGCTGTCAACAATAACAGGAACAAGGGACTTTTATTGTCTGCTGGAGTAATCGATCAACTTGAGCAGATGATATCAAATCCACGCCTATCTGCTCCAGCCACGGCACTATACCTTAACCTTTCCTGCCTACCTGAGGCAAAGAACATCATTGGTTCGAGCCAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCCCGCGACACAAAAGGCAGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCCAACCACCAGGCCAGCGTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTTCGGAGTCCCTGGCGTCTGGGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCAGCCTTGCGGCAACCCAAGCTGGCAGAAAAGATAT CATGTCCACCCC  AGGTCT GATCAGCA CCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCCTTTTGGTGATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGC AGGAAGGAGTGGTGCCTTCC TTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACGGCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACTCTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAGCAGATTTTTGAGCTGAGTTTGATCAGTGGATATGTACATCTTTTCTTGTTCCATGTTTCTCTTGATCTTTCTTTTTTTTTTGCCTTCTTTGTTGTTTCCTTGTGTAAAGTAAAACTATCTTCCCCCCCTTCTCGGTGGGTTGATGTAGGCCATTTCCTCTTTGTTTTTCTTTGCCAAGATATGTGCATAGCTCATCTTTCACTCTACTTAACAAGTTCAGATCAGATCA     ]
[+] EMBL C91848               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCCAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCCCGCGACACAAAAGGCAGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCCAACCACCAGGCCAGCGTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTTCGGAGTCCCTGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCAGCCTTGCGGCAACCCAAGCTGGCAGAAAAGATAT CATGTCCACCCC  AGGTCT GATCAGCA CCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCCTTTTGGTGATGTGCTCAGCCGATGACAAGTGCATTGAACCGGTGCTTCAAGGAAGGAGTTGTGCCTTCC TTGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB679894             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAACCACCAGGCCAGCGTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTTCGGAGTCCCTGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCAGCCTTGCGGCAACCCAAGCTGGCAGAAAAGATAT CATGTCCACCCC  AGGTCT GATCAGCA CCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCCTTTTGGTGATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGC AGGAAGGAGTGGTGCCTTCC TTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACGGCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACTCTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAGCAGATTTTTGAGCTGAGTTTGATCAGTGGATATGTACATCTTTTCTTGTTCCATGTTTCTCTTGATCTTTCTTTTTTTTTTGCCTTCTTTGTTGTTTCCTTGTGTAAAGTAAAACTATCTTCCCCCCCTTCTCGGTGGGGTGATGTAGGCCATTTCCTCTTTGTTTTTCTTTGCCAAGATATGTGCATAGCTCATC                                      ]
[+] EMBL AU094854             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGAAAAGTTNTCCATGTCCACCCCCAAGGTCTNAATCAGCACCCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCANGAGCAGTCGGTGTCCTGCCTTTTGGTGATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTNC AGGAAGGAGTGGTGCCTTCCTTTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACGGCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACTCTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAGCAGATTTTTGAGCTGAGTTTGATCAGTGGATATGTACATCTTTTCTTGTTCCATGTTTCTCTTGATCTTTCTTTTTTTTTTGCCTTCTTTGTTGTTTCCTTGTGTAAAGTAAAACTATCTTCCCCCCCTTCNCGGTGGGGTGATGTAGGCCATTTCCTCTTTGTTTTTCTTTGCCAAGATATGTGCATAGCTCATCTTTCACTCTACTTAACAAGTTCAGATCAGATCAAAAAA]




>consensus_10413#0
CCATTCTTCCTCTCCTCCTCCCCCCGCTTCTCCTCCCCACCTCCGCCTCCGCCTCCGATC
CGCCGCCGCCGTCGGCGACCGCCGGAGCCGCGTGTAGCACGCCGTCTCACCCCCGCCCCC
CCCCCCCAATCGCTCTCCATTTCCCTCCCCTTTCGCTCGCTGCTGCTCCCGCACGCCGCC
GGTGCCCGGATCCCGCTGGCCGACGTCGCCCCTGCCGCCGAGCTGCCTCCTCCTCCCCTT
CTCTCGCCGCTCGAAATGATGTTGGAGCTCTGGTGGTAATTAACCATGGATGCAATGGAG
GCCGAGGAAGGTCCTTTTCTGGCTAATGATGCTAAGTTGCATGCCGGAATGTACAGAGCA
TTTCATCCTGCGGTCTCAAAACTTGTAGCGATTTTCCCTTTCATTGAAGCATCAAGACCC
AGAAGCAAATCTGGCATACAGGCGCTATGCTCTCTACATGTAGCTCTAGATAAAGCCAAA
GGTCTTCTTCAACATTGTGCAGATTGCAGCAGGCTCTACTTGGCCATAACTGCAGAAACT
GTGCTTTTGAAATTTGAGAAAGCAAGAACCCAACTTCAGGAGAGTCTTAGACGCGTGGAG
GGCATAGTAACAGAAGAAATTGGTTGTAAGATTGTAGAGATTATTGCTGAGTTGGAAGAA
GTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTC
CAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATG
GCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTG
AAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCA
TACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGAT
ACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAATATTAGGCATGGAGGACATGTAT
GGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAAT
TCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTAGTGGTCCA
AGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACTG
ATGTACGACCCAGTTATCATTTCATCAGGGCAAACTTATGAGCGTGTTTGCATTGAGAAA
TGGTTTAATGATGGTCACAGCACCTGTCCAAAGACTCAGCAGCAATTATCTCACCTGTCT
TTGACTCCAAATTACTGTGTTAAGGCCCTAATTGCCAGCTGGTGTGAGCAGAATGATTTT
CCTGTTCCTGATGGTCCACCAGGATCCTTCGATGTAAATTGGAGACTTGCTTTATCTGAC
TCCGAAGCGACTGGCTGCGTGTCTCTTGAAAGTTTTGACTCTATCAACGTGAAGAGTGTC
AAGGTAGTTCCATTGGACAACGTGAGAAAAGAAGAGCCAGCAAACAACGAATCGGGAACA
TTGGACGACAGCTCTTGTTATGATTTCGATATGAATGAGGGGTACCGAAACTTACTGCTA
ATGCTTCATGAAAAAACCAACTTACACATCCAGTGCAGGTTGGTTGAGCAGATAAGATAT
CTTCTGAAAGATGATGAGGAAGCTAGAATCCAGATGGGCTCAAATGGGTTTGCTGAGGCA
CTAGTTCAGTTCTTGAGGAACGCTGTGCAAGATGGAAATGAGAAGGCACAGGAAATTGGT
GCCATGGCTCTTTTTAACCTTGCTGTCAACAATAACAGGAACAAGGGACTTTTATTGTCT
GCTGGAGTAATCGATCAACTTGAGCAGATGATATCAAATCCACGCCTATCTGCTCCAGCC
ACGGCACTATACCTTAACCTTTCCTGCCTACCTGAGGCAAAGAACATCATTGGTTCGAGC
CAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCCCGCGACACAAAAGGC
AGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCCAACCACCAGGCCAGC
GTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTTCGGAGTCC
CTGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCAGCCTTGCG
GCAACCCAAGCTGGCAGAAAAGATATCATGTCCACCCCAGGTCTGATCAGCACCTTGGCG
ATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCCTTTTGGTG
ATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGCAGGAAGGAGTGGTGCCTTCC
TTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTC
AAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGCAAGCTCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACGGCACCATG
GTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACT
CTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAGCAGATTTTTGAG
CTGAGTTTGATCAGTGGATATGTACATCTTTTCTTGTTCCATGTTTCTCTTGATCTTTCT
TTTTTTTTTGCCTTCTTTGTTGTTTCCTTGTGTAAAGTAAAACTATCTTCCCCCCCTTCT
CGGTGGGGTGATGTAGGCCATTTCCTCTTTGTTTTTCTTTGCCAAGATATGTGCATAGCT
CATCTTTCACTCTACTTAACAAGTTCAGATCAGATCAAAAAA

consensusID : consensus_10413#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 730
fasta sequence 
                              [GGTTGTAAGGTATGTCATGTGAAAATCCTATCCTCCTAGTACTTGATTTCTTTGANCCNCAAAACCAACTCTGCCCAAGTTATGTTATGGTTTTACAATTTAGTACACCATATGGTATTTCCTGACATCTGGACCTGTTGGTGCACAACAGATTGTAGAGATTATTGCTGAGTTGGAAGAAGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTCCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATGGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTGAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGATACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAGTATTAGGCATGGAGGACATGTATGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAATTCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTGGTGGTCCAAGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACTGATGTCCCCC]

[-] EMBL CA767573             [GGTTGTAAGGTATGTCATGTGAAAATCCTATCCTCCTAGTACTTGATTTCTTTGANCCNCAAAACCAACTCTGCCCAAGTTATGTTATGGTTTTACAATTTAGTACACCATATGGTATTTCCTGACATCTGGACCTGTTGGTGCACAACAGATTGTAGAGATTATTGCTGAGTTGGAAGAAGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTCCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATGGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTGAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGATACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAGTATTAGGCATGGAGGACATGTATGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAATTCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTGGTGGTCCAAGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACTGATGTCCCCC]




>consensus_10413#1
GGTTGTAAGGTATGTCATGTGAAAATCCTATCCTCCTAGTACTTGATTTCTTTGANCCNC
AAAACCAACTCTGCCCAAGTTATGTTATGGTTTTACAATTTAGTACACCATATGGTATTT
CCTGACATCTGGACCTGTTGGTGCACAACAGATTGTAGAGATTATTGCTGAGTTGGAAGA
AGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCT
CCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATAT
GGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCT
GAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTC
ATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGA
TACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAGTATTAGGCATGGAGGACATGTA
TGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAA
TTCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTGGTGGTCC
AAGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACT
GATGTCCCCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10413#0      CCATTCTTCCTCTCCTCCTCCCCCCGCTTCTCCTCCCCACCTCCGCCTCCGCCTCCGATC 60
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CGCCGCCGCCGTCGGCGACCGCCGGAGCCGCGTGTAGCACGCCGTCTCACCCCCGCCCCC 120
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CCCCCCCAATCGCTCTCCATTTCCCTCCCCTTTCGCTCGCTGCTGCTCCCGCACGCCGCC 180
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      GGTGCCCGGATCCCGCTGGCCGACGTCGCCCCTGCCGCCGAGCTGCCTCCTCCTCCCCTT 240
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CTCTCGCCGCTCGAAATGATGTTGGAGCTCTGGTGGTAATTAACCATGGATGCAATGGAG 300
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      GCCGAGGAAGGTCCTTTTCTGGCTAATGATGCTAAGTTGCATGCCGGAATGTACAGAGCA 360
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      TTTCATCCTGCGGTCTCAAAACTTGTAGCGATTTTCCCTTTCATTGAAGCATCAAGACCC 420
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      AGAAGCAAATCTGGCATACAGGCGCTATGCTCTCTACATGTAGCTCTAGATAAAGCCAAA 480
consensus_10413#1      -----------------------------------GGTTGTAAGG-TATGTCATGTGAAA 24
                                                             ****    **  * * *  ***

consensus_10413#0      GGTCTTCTTCAACATTGTGCAGATTGCAGCAGGCTCTACTTGGCCATAACTGCAGAAACT 540
consensus_10413#1      ATCCTATCCTCCTAGTAC-TTGATTTCTTTGANCCNCAA--AACCAACTCTGCCCAAGTT 81
                          **        * *     **** *      *   *     ***   ****  **  *

consensus_10413#0      GTGCTTTTGAAATTTGAGAAAGCAAGAACCCAACTTCAGGAGAGTCTTAGACGCGTGGAG 600
consensus_10413#1      ATGTTATGG---TTTTACAATTTAGTACACCA----TATGGTATTTCCTGACATCTGGAC 134
                        ** * * *   *** * **   *  *  ***     * *  * *    ***   **** 

consensus_10413#0      GGCATAGTAACAGAAGAAATTGGTTGTAAGATTGTAGAGATTATTGCTGAGTTGGAAGAA 660
consensus_10413#1      CTGTTGGTG-CACAACA------------GATTGTAGAGATTATTGCTGAGTTGGAAGAA 181
                           * **  ** ** *            *******************************

consensus_10413#0      GTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTC 720
consensus_10413#1      GTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTC 241
                       ************************************************************

consensus_10413#0      CAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATG 780
consensus_10413#1      CAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATG 301
                       ************************************************************

consensus_10413#0      GCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTG 840
consensus_10413#1      GCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTG 361
                       ************************************************************

consensus_10413#0      AAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCA 900
consensus_10413#1      AAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCA 421
                       ************************************************************

consensus_10413#0      TACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGAT 960
consensus_10413#1      TACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGAT 481
                       ************************************************************

consensus_10413#0      ACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAATATTAGGCATGGAGGACATGTAT 1020
consensus_10413#1      ACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAGTATTAGGCATGGAGGACATGTAT 541
                       ************************************ ***********************

consensus_10413#0      GGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAAT 1080
consensus_10413#1      GGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAAT 601
                       ************************************************************

consensus_10413#0      TCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTAGTGGTCCA 1140
consensus_10413#1      TCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTGGTGGTCCA 661
                       *************************************************** ********

consensus_10413#0      AGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACTG 1200
consensus_10413#1      AGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACTG 721
                       ************************************************************

consensus_10413#0      ATGTACGACCCAGTTATCATTTCATCAGGGCAAACTTATGAGCGTGTTTGCATTGAGAAA 1260
consensus_10413#1      ATGTCCCCC--------------------------------------------------- 730
                       **** *  *                                                   

consensus_10413#0      TGGTTTAATGATGGTCACAGCACCTGTCCAAAGACTCAGCAGCAATTATCTCACCTGTCT 1320
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      TTGACTCCAAATTACTGTGTTAAGGCCCTAATTGCCAGCTGGTGTGAGCAGAATGATTTT 1380
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CCTGTTCCTGATGGTCCACCAGGATCCTTCGATGTAAATTGGAGACTTGCTTTATCTGAC 1440
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      TCCGAAGCGACTGGCTGCGTGTCTCTTGAAAGTTTTGACTCTATCAACGTGAAGAGTGTC 1500
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      AAGGTAGTTCCATTGGACAACGTGAGAAAAGAAGAGCCAGCAAACAACGAATCGGGAACA 1560
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      TTGGACGACAGCTCTTGTTATGATTTCGATATGAATGAGGGGTACCGAAACTTACTGCTA 1620
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      ATGCTTCATGAAAAAACCAACTTACACATCCAGTGCAGGTTGGTTGAGCAGATAAGATAT 1680
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CTTCTGAAAGATGATGAGGAAGCTAGAATCCAGATGGGCTCAAATGGGTTTGCTGAGGCA 1740
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CTAGTTCAGTTCTTGAGGAACGCTGTGCAAGATGGAAATGAGAAGGCACAGGAAATTGGT 1800
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      GCCATGGCTCTTTTTAACCTTGCTGTCAACAATAACAGGAACAAGGGACTTTTATTGTCT 1860
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      GCTGGAGTAATCGATCAACTTGAGCAGATGATATCAAATCCACGCCTATCTGCTCCAGCC 1920
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      ACGGCACTATACCTTAACCTTTCCTGCCTACCTGAGGCAAAGAACATCATTGGTTCGAGC 1980
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCCCGCGACACAAAAGGC 2040
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      AGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCCAACCACCAGGCCAGC 2100
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      GTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTTCGGAGTCC 2160
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CTGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCAGCCTTGCG 2220
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      GCAACCCAAGCTGGCAGAAAAGATATCATGTCCACCCCAGGTCTGATCAGCACCTTGGCG 2280
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      ATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCCTTTTGGTG 2340
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      ATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGCAGGAAGGAGTGGTGCCTTCC 2400
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      TTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTC 2460
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      AAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGCAAGCTCAG 2520
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACGGCACCATG 2580
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      GTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACT 2640
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAGCAGATTTTTGAG 2700
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CTGAGTTTGATCAGTGGATATGTACATCTTTTCTTGTTCCATGTTTCTCTTGATCTTTCT 2760
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      TTTTTTTTTGCCTTCTTTGTTGTTTCCTTGTGTAAAGTAAAACTATCTTCCCCCCCTTCT 2820
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CGGTGGGGTGATGTAGGCCATTTCCTCTTTGTTTTTCTTTGCCAAGATATGTGCATAGCT 2880
consensus_10413#1      ------------------------------------------------------------
                                                                                   

consensus_10413#0      CATCTTTCACTCTACTTAACAAGTTCAGATCAGATCAAAAAA 2922
consensus_10413#1      ------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)