cluster # 10417

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Oryza sativa
cluster # 10417 cluster # 10417 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10417#0 length = 2482 sequences # 6

consensus_10417#1 length = 560 sequences # 1

consensusID : consensus_10417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2482
fasta sequence

                              [CCTCGACTTCCCTTCCACCACCACCCGCCGCGCGGCGTCGCCGATGCCACCCTGCGCGCTCGCCGCCGGGGGGAGCGCGCGGCGGCGGCTTCCTCCGCGGCGCTGACGAGCGGGGGACCTCGGGGGTTGCGCGGGTGGGCGGCGGCGGTGAAGGTGCGTGTGTGCGCGCGGGTGGGGGTGATGGGGAAGGAGGGGAAGCGGCGGGAGGAGGAGGGGAGGCGGAGGAGGAAGGGGAAGGGGAAGGGGGCGGGGGAGATGGTGCTGCAGCAGGAGGAGGAGGACGCGGCGCCCGCGA-TGGGGTGCTGGATCCGCATCCCGCGCAGGCTCGGCGGCGGCTGCATGTCGTCGCGCTCCAAGGTCGACTCCTCCACCACCACCAGCGGCGGCGGCGGCGGCGGCAGCGCTCGCGTCGGCGGCGAAAGCAAATCAGCGAATGATGGTTGTCGAGACCATTCAGTTCAACCAATGGCCTCTGGTTCCACAACATCCA-GTAACACTGGAAGCATCTCACCTTCGTCCATAGTCGGAGAGGAACTTAAACTAGCTTTCCAACTCCGTAGGTTTACATTTAATGAACTTAAGTGTGCCACAAGAAACTTCCGGCCTGAGAGTCTCCTTGGTGAAGGAGGTTTTGGCTGTGTCTTTAAAGGTTGGATTGAGGAGAACGGAACTGCTCCCGTAAAACCTGGCACAGGATTAACGGTTGCTGTCAAGACACTTAACCATGATGGGCTGCAGGGCCATAAAGAGTGGGTGGCAGAAGTTGATTTTCTTGGAAACCTTCAACATCCACACCTAGTGAAATTGGTTGGTTACTGCATCGAAGATGACCAAAGGTTGCTAGTGTATGAATTTATGCCTCGTGGAAGCTTGGAGAACCATCTTTTTAGGAGGTCTTTACCTCTCCCATGGGCCATCAGAATGAGAATAGCACTTGGTGCTGCTAAGGGCCTTGCTTTTCTTCATGAAGAAGCTGAAAGGCCAGTTATCTATCGGGATTTCAAAACTTCAAATATTCTTTTAGACGCGGACTACAATGCAAAACTCTCTGATTTTGGACTAGCTAAAGATGGCCCTGAGGGTGATAAAACACATGTATCTACTCGAGTCATGGGAACTTATGGATATGCAGCTCCGGAGTATGTCATGACAGGTCACTTGACATCAAAGAGTGACGTGTACAGCTTTGGAGTGGTGCTACTGGAGATGATGTCAGGCAGAAGGTCAATGGACAAGAATAGGCCAAACGGTGAACACAACCTGGTTGAATGGGCGCGTCCTTATCTTGGAGAAAGACGGCGATTCTATAGGCTTGTAGACCCCCGTCTGGAGGGGAACTTCTCCATAAGAGGCGCTCAGAAGACAGCTCAGCTGGCCTGTGCCTGCCTTAACCGGGATCCCAAGGCCAGGCCTCTCATGAGTCAAGTGGTCGAAGTCCTCAAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAGCAGGAGCGTGCCGCAAGCCTCGGCAACCCAATTGGCAGCCAAAGCATGAAGGCACAGGGCACCTTCGCGCGCAACGGGCAGCAGCCAATGAGGAGCCTC-TCCTATGGCCCGCACGCCTCCCC-GTACCGG-CAGT-CCCCAAGGCCCAACAACGGCAAACTGCAATGAGAGAGTCCTTGGTGCTCATTCTGCCATCCATTCAACAATGATCAGTGCAAGACTGGACTTCCTATCCAACCTGGGTGCA-TTGGTGGTGCA-CCCAA-CCAACCTACCATGGCACCTGGGAGCA-CCCTGTGTCGTGGAGGAAACCGGGTTTCCAGAACGACTAGAACTGCGCGCAAACGTGTACAATGTGCAAACTTTCATCTTGTCGCTTAAGCTTCTACATTTCCAATTCTAGCTTACCCTTGACTTGGGAGAGGGGGTGGATCAAACCGGGTTTTTCTTTTGCTTTTCTTCTGAACAAATGCTCAGACTGAGGTGGTTAGGTTTGCCCCTTCCCGGAGAATGCTGGGTTTGGGCTCTTACTCGCACTGTCATCACCTGTCGGTCGCCTTCGCCTTGTAATTAATCGCCATGTGGAGAATGGC-----AAAAAAAAAGGGGAGGCAAATTGGTCGTCATCAAAAACCGTCGTCTTCGTCGTCGCCATCATCATTCCATGATGCTTGCTGGATTATGGAGATGGTGAGGAAGGGAGGAAGGGCAGGCAGGTCAGTTAAGGCGCATGTGCCATTGATGGGGTGACAGAGCTAAGCTCCGCTTTCAGGTAGGCCGTGGTACGCGACGCACCCCTCCTTCCTTTGACAGATAGATCATGATCATATGCATGCATGCGACGATGCGAGTTTGGTAATCTAAGATGCTCGCACGTGCCATTACTCCCCTGATCATTTTACCCATCCTTTTTACCGGCTGGTAACTCTCTACTCACTCTCTTGTCTGTGATGGATTGATTGTTACTGCTTCTTGTTGTACTGCGTCGTTG]

[+] EMBL AK103037             [CCTCGACTTCCCTTCCACCACCACCCGCCGCGCGGCGTCGCCGATGCCACCCTGCGCGCTCGCCGCCGGGGGGAGCGCGCGGCGGCGGCTTCCTCCGCGGCGCTGACGAGCGGGGGACCTCGGGGGTTGCGCGGGTGGGCGGCGGCGGTGAAGGTGCGTGTGTGCGCGCGGGTGGGGGTGATGGGGAAGGAGGGGAAGCGGCGGGAGGAGGAGGGGAGGCGGAGGAGGAAGGGGAAGGGGAAGGGGGCGGGGGAGATGGTGCTGCAGCAGGAGGAGGAGGACGCGGCGCCCGCGA TGGGGTGCTGGATCCGCATCCCGCGCAGGCTCGGCGGCGGCTGCATGTCGTCGCGCTCCAAGGTCGACTCCTCCACCACCACCAGCGGCGGCGGCGGCGGCGGCAGCGCTCGCGTCGGCGGCGAAAGCAAATCAGCGAATGATGGTTGTCGAGACCATTCAGTTCAACCAATGGCCTCTGGTTCCACAACATCCA GTAACACTGGAAGCATCTCACCTTCGTCCATAGTCGGAGAGGAACTTAAACTAGCTTTCCAACTCCGTAGGTTTACATTTAATGAACTTAAGTGTGCCACAAGAAACTTCCGGCCTGAGAGTCTCCTTGGTGAAGGAGGTTTTGGCTGTGTCTTTAAAGGTTGGATTGAGGAGAACGGAACTGCTCCCGTAAAACCTGGCACAGGATTAACGGTTGCTGTCAAGACACTTAACCATGATGGGCTGCAGGGCCATAAAGAGTGGGTGGCAGAAGTTGATTTTCTTGGAAACCTTCAACATCCACACCTAGTGAAATTGGTTGGTTACTGCATCGAAGATGACCAAAGGTTGCTAGTGTATGAATTTATGCCTCGTGGAAGCTTGGAGAACCATCTTTTTAGGAGGTCTTTACCTCTCCCATGGGCCATCAGAATGAGAATAGCACTTGGTGCTGCTAAGGGCCTTGCTTTTCTTCATGAAGAAGCTGAAAGGCCAGTTATCTATCGGGATTTCAAAACTTCAAATATTCTTTTAGACGCGGACTACAATGCAAAACTCTCTGATTTTGGACTAGCTAAAGATGGCCCTGAGGGTGATAAAACACATGTATCTACTCGAGTCATGGGAACTTATGGATATGCAGCTCCGGAGTATGTCATGACAGGTCACTTGACATCAAAGAGTGACGTGTACAGCTTTGGAGTGGTGCTACTGGAGATGATGTCAGGCAGAAGGTCAATGGACAAGAATAGGCCAAACGGTGAACACAACCTGGTTGAATGGGCGCGTCCTTATCTTGGAGAAAGACGGCGATTCTATAGGCTTGTAGACCCCCGTCTGGAGGGGAACTTCTCCATAAGAGGCGCTCAGAAGACAGCTCAGCTGGCCTGTGCCTGCCTTAACCGGGATCCCAAGGCCAGGCCTCTCATGAGTCAAGTGGTCGAAGTCCTCAAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAGCAGGAGCGTGCCGCAAGCCTCGGCAACCCAATTGGCAGCCAAAGCATGAAGGCACAGGGCACCTTCGCGCGCAACGGGCAGCAGCCAATGAGGAGCCTC TCCTATGGCCCGCACGCCTCCCC GTACCGG CAGT CCCCAAGGCCCAACAACGGCAAACTGCAATGAGAGAGTCCTTGGTGCTCATTCTGCCATCCATTCAACAATGATCAGTGCAAGACTGGACTTCCTATCCAACCTGGGTGCA TTGGTGGTGCA CCCAA CCAACCTACCATGGCACCTGGGAGCA CCCTGTGTCGTGGAGGAAACCGGGTTTCCAGAACGACTAGAACTGCGCGCAAACGTGTACAATGTGCAAACTTTCATCTTGTCGCTTAAGCTTCTACATTTCCAATTCTAGCTTACCCTTGACTTGGGAGAGGGGGTGGATCAAACCGGGTTTTTCTTTTGCTTTTCTTCTGAACAAATGCTCAGACTGAGGTGGTTAGGTTTGCCCCTTCCCGGAGAATGCTGGGTTTGGGCTCTTACTCGCACTGTCATCACCTGTCGGTCGCCTTCGCCTTGTAATTAATCGCCATGTGGAGAATGGC     AAAAAAAAAGGGGAGGCAAATTGGTCGTCATCAAAGACCGTCGTCTTCGTCGTCGCCATCATCATTCCATGATGCTTGCTGGATTATGGAGATGGTGAGGAAGGGAGGAAGGGCAGGCAGGTCAGTTAAGGCGCATGTGCCATTGATGGGGTGACAGAGCTAAGCTCCGCTTTCAGGTAGGCCGTGGTACGCGACGCACCCCTCCTTCCTTTGACAGATAGATCATGATCATATGCATGCATGCGACGATGCGAGTTTGGTAATCTAAGATGCTCGCACGTGCCATTACTCCCCTGATCATTTTACCCATCCTTTTTACCGGCTGGTAACTCTCTACTCACTCTCTTGTCTGTGATGGATTGATTGTTACTGCTTCTTGTTGTACTGCGTCGTTG]
[+] EMBL C72983               [                                                                                                                                                                                                                                                                   TGCTGCAGCAGGAGGAGGAGGACGCGGCGCCCG GAGTGGGGTGCTGGATCCGCATCCCGCGCCGGCTCNGCGGCGGCTGCATGTCGTCNCGCTCCAAGGTCGACTCCTCCACCACCACCAGCGGCGGCGGCGGCGGCGGCA CGCTCGCGTCGGCGGCGAAA CAAATCAGCGAATGATGGTTGTCGAGACCATTCAGTTCAACCAATGGCCTCTGGTTCCACAACATCCAGGTAACACTGGAAGCATCTCACCTTCGTCCATAGTCGGAGAGGAACTTAAACTAGCTTTCCAACTCCGTA GTTTACATTTAATGAACTTNAGTGTGCCACAAG AACTTCCGGCCTGANAGTCTCCTTGGTGANGGAGGTTTTNGCTGTGTCTTTAAAGGTTGGATTNAGGAGAACGGAA TGCT CCGTAAAACCTGGCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C28501               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATAGGCTTGTAGACCCCCGTNTGGAGGGGAACTTCTCCATAAGAGGCGCTCAGAAGACAGCTCAGCTGGCCTGTGCCTGCCTTAACCGGGATCCCAAGGCCAGGCNTCTCATGAGTCAAGTGGTCGAAGTCCTCAAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAGCAGGAGCGTGCCGCAAGCCTCGGCAACCCAATTGGCAGCCAAAGCATGAAGGCACAGGGCACCTTCGCGCGCAACGGGCAGCAGCCAATGAGGAGCCTC TCCTATGGNCCGCACGGCTCCCC G                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI796356             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCTCTTCCTATGGCCCGCACGCCTCCCCTTTACCGGCCAGTCCCCCAAGGCCCAACAACGCCAAACTGCAATGAGAGAGTCCTTGGTGCTCATTCTGCCATCCATTCAACAATGATCAGTGCAAGACTGGACTTCCTATCCAACCTGGGTGCA TTGGTGCTGCA CCCAA CCAACCTACCATGGCACCTGGGAGCA CCCTGTGTCGTGGAGGAAACCGGGTTTCCAGAACGACTAGAACTGCGCGCAAACGTGTAC ATGTGCAAACTTTCATCTTGTCGCTTAAGCTTCTACATTTCC ATTCTAGCTTACCCTTGACTTGGGAGAGGGGGTGGATCCAACCGGGTTTTACTTTTGCTTTTCTTCTGAACCAATGCTCAGACTGAGGTGCTTAGGTTTGCCCCTTCCTGGAGAATGCTGGGTTTGGGCTCTTACTCGCACTGTCATCACCTGTCGGTCGCCTTCGCCTTGTAATTAATCGCCATGTGGAGAATGGC     AAAAAAAAAGGGGAGGC AATTGGTCGTCATCAAAAA                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM420906             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACTGCAATGAGAGAGTCCTTGGTGCTCATTCTGCCATCCATTCAACAATGATCAGTGCAAGACTGGACTTCCTATCCAACCTGGGTGCATTTGGTGCTGCA CCCAA CCAACCTACCATGGCACCTGGGAGCACCCCTGTGTCGTGGAGGAAACCGGGTTTCCAGAACGACTAGAACTGCGCGCAAACGTGTACAATGTGCAAACTTTCATCTTGTCGCTTAAGCTTCTACATTTCCAATTCTAGCTTACCCTTGACTTGGGAGAGGGGGTGGATCAAACCGGGTTTTTCTTTTGCTTTTCTTCTGAACAAATGCTCAGACTGAGGTGCTTAGGTTTGCCCCTTCCTGGAGAATGCTGGGTTTGGGCTCTTACTCGCACTGTCATCACCTGTCGGTCGCCTTCGCCTTGTAATTAATCGCCATGTGGAGAATGGCAAAAAAAAAAAAAAGGGGAGGC AATTGGTCGTCATCAAAAAaa                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU172570             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATGATCAGTGCAAGNCTGGACTTCCTATCCAACCTGGGTGCA TTGGTGGTGCACCCCAACCCAACCTACCATGGCACCTGGGAGCA CCCTGTGTCGTGGAGGAAACCGGGTTTCCAGAACGACTAGAACTGCGCGCAAACGTGTACAATGTGCAAACTTTCATCTTGTCGCTTAAGCTTCTACATTTCCAATTCTAGCTTACCCTTGACTTGGGAGAGGGGGTGGATCAAACCGGGTTTTTCTTTTGCTTTTCTTCTGAACAAATGCTCAGACTGAGGTGGTTAGGTTTGCCCCTTCCCGGAGAATGCTGGGTTTGGGCTCTTACTCGCACTGTCATCACCTGTCGGTCGCCTTCGCCTTGTAATTAATCGCCATGTGGAGAATGGCA    AAAAAAAAAGGGGAGGCAAATTGGTCGTCA  AAAA                                                                                                                                                                                                                                                                                                                                                                       ]




>consensus_10417#0
CCTCGACTTCCCTTCCACCACCACCCGCCGCGCGGCGTCGCCGATGCCACCCTGCGCGCT
CGCCGCCGGGGGGAGCGCGCGGCGGCGGCTTCCTCCGCGGCGCTGACGAGCGGGGGACCT
CGGGGGTTGCGCGGGTGGGCGGCGGCGGTGAAGGTGCGTGTGTGCGCGCGGGTGGGGGTG
ATGGGGAAGGAGGGGAAGCGGCGGGAGGAGGAGGGGAGGCGGAGGAGGAAGGGGAAGGGG
AAGGGGGCGGGGGAGATGGTGCTGCAGCAGGAGGAGGAGGACGCGGCGCCCGCGATGGGG
TGCTGGATCCGCATCCCGCGCAGGCTCGGCGGCGGCTGCATGTCGTCGCGCTCCAAGGTC
GACTCCTCCACCACCACCAGCGGCGGCGGCGGCGGCGGCAGCGCTCGCGTCGGCGGCGAA
AGCAAATCAGCGAATGATGGTTGTCGAGACCATTCAGTTCAACCAATGGCCTCTGGTTCC
ACAACATCCAGTAACACTGGAAGCATCTCACCTTCGTCCATAGTCGGAGAGGAACTTAAA
CTAGCTTTCCAACTCCGTAGGTTTACATTTAATGAACTTAAGTGTGCCACAAGAAACTTC
CGGCCTGAGAGTCTCCTTGGTGAAGGAGGTTTTGGCTGTGTCTTTAAAGGTTGGATTGAG
GAGAACGGAACTGCTCCCGTAAAACCTGGCACAGGATTAACGGTTGCTGTCAAGACACTT
AACCATGATGGGCTGCAGGGCCATAAAGAGTGGGTGGCAGAAGTTGATTTTCTTGGAAAC
CTTCAACATCCACACCTAGTGAAATTGGTTGGTTACTGCATCGAAGATGACCAAAGGTTG
CTAGTGTATGAATTTATGCCTCGTGGAAGCTTGGAGAACCATCTTTTTAGGAGGTCTTTA
CCTCTCCCATGGGCCATCAGAATGAGAATAGCACTTGGTGCTGCTAAGGGCCTTGCTTTT
CTTCATGAAGAAGCTGAAAGGCCAGTTATCTATCGGGATTTCAAAACTTCAAATATTCTT
TTAGACGCGGACTACAATGCAAAACTCTCTGATTTTGGACTAGCTAAAGATGGCCCTGAG
GGTGATAAAACACATGTATCTACTCGAGTCATGGGAACTTATGGATATGCAGCTCCGGAG
TATGTCATGACAGGTCACTTGACATCAAAGAGTGACGTGTACAGCTTTGGAGTGGTGCTA
CTGGAGATGATGTCAGGCAGAAGGTCAATGGACAAGAATAGGCCAAACGGTGAACACAAC
CTGGTTGAATGGGCGCGTCCTTATCTTGGAGAAAGACGGCGATTCTATAGGCTTGTAGAC
CCCCGTCTGGAGGGGAACTTCTCCATAAGAGGCGCTCAGAAGACAGCTCAGCTGGCCTGT
GCCTGCCTTAACCGGGATCCCAAGGCCAGGCCTCTCATGAGTCAAGTGGTCGAAGTCCTC
AAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAG
CAGGAGCGTGCCGCAAGCCTCGGCAACCCAATTGGCAGCCAAAGCATGAAGGCACAGGGC
ACCTTCGCGCGCAACGGGCAGCAGCCAATGAGGAGCCTCTCCTATGGCCCGCACGCCTCC
CCGTACCGGCAGTCCCCAAGGCCCAACAACGGCAAACTGCAATGAGAGAGTCCTTGGTGC
TCATTCTGCCATCCATTCAACAATGATCAGTGCAAGACTGGACTTCCTATCCAACCTGGG
TGCATTGGTGGTGCACCCAACCAACCTACCATGGCACCTGGGAGCACCCTGTGTCGTGGA
GGAAACCGGGTTTCCAGAACGACTAGAACTGCGCGCAAACGTGTACAATGTGCAAACTTT
CATCTTGTCGCTTAAGCTTCTACATTTCCAATTCTAGCTTACCCTTGACTTGGGAGAGGG
GGTGGATCAAACCGGGTTTTTCTTTTGCTTTTCTTCTGAACAAATGCTCAGACTGAGGTG
GTTAGGTTTGCCCCTTCCCGGAGAATGCTGGGTTTGGGCTCTTACTCGCACTGTCATCAC
CTGTCGGTCGCCTTCGCCTTGTAATTAATCGCCATGTGGAGAATGGCAAAAAAAAAGGGG
AGGCAAATTGGTCGTCATCAAAAACCGTCGTCTTCGTCGTCGCCATCATCATTCCATGAT
GCTTGCTGGATTATGGAGATGGTGAGGAAGGGAGGAAGGGCAGGCAGGTCAGTTAAGGCG
CATGTGCCATTGATGGGGTGACAGAGCTAAGCTCCGCTTTCAGGTAGGCCGTGGTACGCG
ACGCACCCCTCCTTCCTTTGACAGATAGATCATGATCATATGCATGCATGCGACGATGCG
AGTTTGGTAATCTAAGATGCTCGCACGTGCCATTACTCCCCTGATCATTTTACCCATCCT
TTTTACCGGCTGGTAACTCTCTACTCACTCTCTTGTCTGTGATGGATTGATTGTTACTGC
TTCTTGTTGTACTGCGTCGTTG

consensusID : consensus_10417#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 560
fasta sequence

                              [AACAATACGCCAAACGGTGAACACAACCTGGTTGAATGGGCGCGTCCTTATCTTGGACAAAGACGGCGATTCTATACGCTTGTACACCCCCGTCTGGAGGGGAACTTCTCCATAACACGCGCTCACAAGACAGCTCAGCTGGCCTGTGCCTGCCTTAACCGGGATCCCAAGGCCAGGCCTCTCATGAGTCAAGTGGTCGAAGTCCTCAAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAGCAGAGCGTGCCGCAAGCCTCGGCAACCCAATTGGCATCCAAAGCATGAAGCACAGGCACCTTCCCGCGCAACGGCAGCACCAATGAAGAACCTCTCCTATGGCCCGCACGCCTCCCCGTACCGGCATCCCCAAGGCCCAACAACGCAAATTGCAATTAAAAAATCCTTGGTTGCTCATCTTGCCATCCATTCCACAATNATCAATTNCAAAANTGGATTCCCTNTCCCACCTTGGGTTCATTGGTGTTCACCCAACCAACTACCATGGNCCTTGGGACNCCTTTTTTCTTGNA]

[+] EMBL AA754035             [AACAATACGCCAAACGGTGAACACAACCTGGTTGAATGGGCGCGTCCTTATCTTGGACAAAGACGGCGATTCTATACGCTTGTACACCCCCGTCTGGAGGGGAACTTCTCCATAACACGCGCTCACAAGACAGCTCAGCTGGCCTGTGCCTGCCTTAACCGGGATCCCAAGGCCAGGCCTCTCATGAGTCAAGTGGTCGAAGTCCTCAAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAGCAGAGCGTGCCGCAAGCCTCGGCAACCCAATTGGCATCCAAAGCATGAAGCACAGGCACCTTCCCGCGCAACGGCAGCACCAATGAAGAACCTCTCCTATGGCCCGCACGCCTCCCCGTACCGGCATCCCCAAGGCCCAACAACGCAAATTGCAATTAAAAAATCCTTGGTTGCTCATCTTGCCATCCATTCCACAATNATCAATTNCAAAANTGGATTCCCTNTCCCACCTTGGGTTCATTGGTGTTCACCCAACCAACTACCATGGNCCTTGGGACNCCTTTTTTCTTGNA]




>consensus_10417#1
AACAATACGCCAAACGGTGAACACAACCTGGTTGAATGGGCGCGTCCTTATCTTGGACAA
AGACGGCGATTCTATACGCTTGTACACCCCCGTCTGGAGGGGAACTTCTCCATAACACGC
GCTCACAAGACAGCTCAGCTGGCCTGTGCCTGCCTTAACCGGGATCCCAAGGCCAGGCCT
CTCATGAGTCAAGTGGTCGAAGTCCTCAAGCCCCTCCTGAACCTCAAAGACATGGCCAGC
TCCTCATACTTCTTCCAATCCATGCAGCAGAGCGTGCCGCAAGCCTCGGCAACCCAATTG
GCATCCAAAGCATGAAGCACAGGCACCTTCCCGCGCAACGGCAGCACCAATGAAGAACCT
CTCCTATGGCCCGCACGCCTCCCCGTACCGGCATCCCCAAGGCCCAACAACGCAAATTGC
AATTAAAAAATCCTTGGTTGCTCATCTTGCCATCCATTCCACAATNATCAATTNCAAAAN
TGGATTCCCTNTCCCACCTTGGGTTCATTGGTGTTCACCCAACCAACTACCATGGNCCTT
GGGACNCCTTTTTTCTTGNA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10417#0      CCTCGACTTCCCTTCCACCACCACCCGCCGCGCGGCGTCGCCGATGCCACCCTGCGCGCT 60
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CGCCGCCGGGGGGAGCGCGCGGCGGCGGCTTCCTCCGCGGCGCTGACGAGCGGGGGACCT 120
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CGGGGGTTGCGCGGGTGGGCGGCGGCGGTGAAGGTGCGTGTGTGCGCGCGGGTGGGGGTG 180
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      ATGGGGAAGGAGGGGAAGCGGCGGGAGGAGGAGGGGAGGCGGAGGAGGAAGGGGAAGGGG 240
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      AAGGGGGCGGGGGAGATGGTGCTGCAGCAGGAGGAGGAGGACGCGGCGCCCGCGATGGGG 300
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      TGCTGGATCCGCATCCCGCGCAGGCTCGGCGGCGGCTGCATGTCGTCGCGCTCCAAGGTC 360
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GACTCCTCCACCACCACCAGCGGCGGCGGCGGCGGCGGCAGCGCTCGCGTCGGCGGCGAA 420
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      AGCAAATCAGCGAATGATGGTTGTCGAGACCATTCAGTTCAACCAATGGCCTCTGGTTCC 480
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      ACAACATCCAGTAACACTGGAAGCATCTCACCTTCGTCCATAGTCGGAGAGGAACTTAAA 540
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CTAGCTTTCCAACTCCGTAGGTTTACATTTAATGAACTTAAGTGTGCCACAAGAAACTTC 600
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CGGCCTGAGAGTCTCCTTGGTGAAGGAGGTTTTGGCTGTGTCTTTAAAGGTTGGATTGAG 660
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GAGAACGGAACTGCTCCCGTAAAACCTGGCACAGGATTAACGGTTGCTGTCAAGACACTT 720
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      AACCATGATGGGCTGCAGGGCCATAAAGAGTGGGTGGCAGAAGTTGATTTTCTTGGAAAC 780
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CTTCAACATCCACACCTAGTGAAATTGGTTGGTTACTGCATCGAAGATGACCAAAGGTTG 840
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CTAGTGTATGAATTTATGCCTCGTGGAAGCTTGGAGAACCATCTTTTTAGGAGGTCTTTA 900
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CCTCTCCCATGGGCCATCAGAATGAGAATAGCACTTGGTGCTGCTAAGGGCCTTGCTTTT 960
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CTTCATGAAGAAGCTGAAAGGCCAGTTATCTATCGGGATTTCAAAACTTCAAATATTCTT 1020
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      TTAGACGCGGACTACAATGCAAAACTCTCTGATTTTGGACTAGCTAAAGATGGCCCTGAG 1080
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GGTGATAAAACACATGTATCTACTCGAGTCATGGGAACTTATGGATATGCAGCTCCGGAG 1140
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      TATGTCATGACAGGTCACTTGACATCAAAGAGTGACGTGTACAGCTTTGGAGTGGTGCTA 1200
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CTGGAGATGATGTCAGGCAGAAGGTCAATGGACAAGAATAGGCCAAACGGTGAACACAAC 1260
consensus_10417#1      ---------------------------------AACAATACGCCAAACGGTGAACACAAC 27
                                                        ** **** *******************

consensus_10417#0      CTGGTTGAATGGGCGCGTCCTTATCTTGGAGAAAGACGGCGATTCTATAGGCTTGTAGAC 1320
consensus_10417#1      CTGGTTGAATGGGCGCGTCCTTATCTTGGACAAAGACGGCGATTCTATACGCTTGTACAC 87
                       ****************************** ****************** ******* **

consensus_10417#0      CCCCGTCTGGAGGGGAACTTCTCCATAAGAGGCGCTCAGAAGACAGCTCAGCTGGCCTGT 1380
consensus_10417#1      CCCCGTCTGGAGGGGAACTTCTCCATAACACGCGCTCACAAGACAGCTCAGCTGGCCTGT 147
                       **************************** * ******* *********************

consensus_10417#0      GCCTGCCTTAACCGGGATCCCAAGGCCAGGCCTCTCATGAGTCAAGTGGTCGAAGTCCTC 1440
consensus_10417#1      GCCTGCCTTAACCGGGATCCCAAGGCCAGGCCTCTCATGAGTCAAGTGGTCGAAGTCCTC 207
                       ************************************************************

consensus_10417#0      AAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAG 1500
consensus_10417#1      AAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAG 267
                       ************************************************************

consensus_10417#0      CAGGAGCGTGCCGCAAGCCTCGGCAACCCAATTGGCAGCCAAAGCATGAAGGCACAGGGC 1560
consensus_10417#1      CAG-AGCGTGCCGCAAGCCTCGGCAACCCAATTGGCATCCAAAGCATGAAG-CACAGG-C 324
                       *** ********************************* ************* ****** *

consensus_10417#0      ACCTTCGCGCGCAACGGGCAGCAGCCAATGAGGAGCCTCTCCTATGGCCCGCACGCCTCC 1620
consensus_10417#1      ACCTTCCCGCGCAACGG-CAGCA-CCAATGAAGAACCTCTCCTATGGCCCGCACGCCTCC 382
                       ****** ********** ***** ******* ** *************************

consensus_10417#0      CCGTACCGGCAGTCCCCAAGGCCCAACAACGGCAAACTGCAATGAGAGAGTCCTTGGT-G 1679
consensus_10417#1      CCGTACCGGCA-TCCCCAAGGCCCAACAACG-CAAATTGCAATTAAAAAATCCTTGGTTG 440
                       *********** ******************* **** ****** * * * ******** *

consensus_10417#0      CTCATTCTGCCATCCATTCAACAATGATCAGT-GCAAGACTGGACTTCCTATCCAACCT- 1737
consensus_10417#1      CTCATCTTGCCATCCATTCCACAATNATCAATTNCAAAANTGGATTCCCTNTCCCACCTT 500
                       *****  ************ ***** **** *  *** * **** * *** *** **** 

consensus_10417#0      GGGTGCATTGGTGGTGCACCCAACCAACCTACCATGGCACCTGGGAGCACCCTGTGTCGT 1797
consensus_10417#1      GGGTTCATTGGTG-TTCACCCAACCAAC-TACCATGGNCCTTGGGA-CNCCTTTTTTCTT 557
                       **** ******** * ************ ********  * ***** * ** * * ** *

consensus_10417#0      GGAGGAAACCGGGTTTCCAGAACGACTAGAACTGCGCGCAAACGTGTACAATGTGCAAAC 1857
consensus_10417#1      GNA--------------------------------------------------------- 560
                       * *                                                         

consensus_10417#0      TTTCATCTTGTCGCTTAAGCTTCTACATTTCCAATTCTAGCTTACCCTTGACTTGGGAGA 1917
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GGGGGTGGATCAAACCGGGTTTTTCTTTTGCTTTTCTTCTGAACAAATGCTCAGACTGAG 1977
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GTGGTTAGGTTTGCCCCTTCCCGGAGAATGCTGGGTTTGGGCTCTTACTCGCACTGTCAT 2037
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CACCTGTCGGTCGCCTTCGCCTTGTAATTAATCGCCATGTGGAGAATGGCAAAAAAAAAG 2097
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GGGAGGCAAATTGGTCGTCATCAAAAACCGTCGTCTTCGTCGTCGCCATCATCATTCCAT 2157
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GATGCTTGCTGGATTATGGAGATGGTGAGGAAGGGAGGAAGGGCAGGCAGGTCAGTTAAG 2217
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GCGCATGTGCCATTGATGGGGTGACAGAGCTAAGCTCCGCTTTCAGGTAGGCCGTGGTAC 2277
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GCGACGCACCCCTCCTTCCTTTGACAGATAGATCATGATCATATGCATGCATGCGACGAT 2337
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GCGAGTTTGGTAATCTAAGATGCTCGCACGTGCCATTACTCCCCTGATCATTTTACCCAT 2397
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CCTTTTTACCGGCTGGTAACTCTCTACTCACTCTCTTGTCTGTGATGGATTGATTGTTAC 2457
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      TGCTTCTTGTTGTACTGCGTCGTTG 2482
consensus_10417#1      -------------------------