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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10419#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2282 fasta sequence
[GAGAGCCAGAAGAAGATCGCGCTGCTGGAGGGCGAGTGCCAGCGGCTGCGCGCCATGGTGCGGAAGCGCCTCCCGGGCCCCGCCGCCATCGCCAAGATGAGGGACGAGGTGGACCAGCCGGCGACACCCAGAAGGTCGCGCTCCGTGGCGCCGATGTCGCCGCGGTCCGTGGCGCCGGCGGCGCCGATGACACCCATGTCGACGTCGGCGCGGCCGATGACTCCCACCATGTCAGCGCGGCCAATGACGCCCATGTCGGCGCGGCCGATGACGCCGCGCCGTGCCGCCGCGGCGGAGCACGAGACGCCCGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCAGCGAGCTGACCGAGGAGAACAAGCAGCTGAGCGACGCCCATGGCCAGACGGAGTCGTGGGCCTCCGCGCTGATCTCCGAGCTGGAGCAGTTCAGGGCCGCGAAGCTGCAGGGAGCAGCAGCATCTGAGATGAGCTTGCTCGACGATTTCGCCGAGATCGAGAGGTTGGAGATGGCTTCAGGTGGCCAAGGATTGAGATCGCCCAAGAATGCGCATTCGGAAGCGATTTCTTCAGAGAAGAATGATAAAGACACTGTCCTAGAAAATGGTATCTCTATCTCCAATGGCCAGCCTGAATGGGTTCAGGATATGTGCAAGCTTGTGATGCAGAAGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGATTTGAATGGATCATATGACTGGAGCATAATGAAGGAAATGGTGTTCAGCCTGACTGAAAAGATCACCTCTGTTATTGGCATATCTGAAGAAGGCAATGTTGCAAGTTCTCAAAAATTGCTGCTTGACAGGTCTGAATTTTGTGCTCGCCTTGAGCATTTGGTCCATGTCTGTCATGATCTACTGCATGGTAAAACTGACCTTGAAAAGTTTGTGCATGAGGTTTGTTTGGTTCTAGAGTATATAATCAACCAGTACAAGAATATATCATTCCAAGAACAACCAGACACTGTGAATAATAATACAGAGAATTTGGATGGAGAGGAATCATTTGGTAACATGAATGGTGGATGTGACATAAAAAGTCCGAAATCATCATCTGCTCCAGACATACAAACTGAAGCACTGGAAGAATCAATTCAGTCGGTAGAAGGCCGAAAAACAGATCATATTTTGGTTAACCAAGAAGAGAGTCAACTTGATGAAGAACTCACAAGAGTTATACTAGACCAGGACGAGAAAATCAGTCAGGAGAACTCAGCATCCTGTGAGATAGAAAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGCATTTAGCATCAAGTTCAGAGATATCAGCAGCGGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCGGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATCTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGGTCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAATTTAATAAGTTAAAAATTCGTTCTTGTTCAAAAAAAAGA]
[+] EMBL AK099971 [GAGAGCCAGAAGAAGATCGCGCTGCTGGAGGGCGAGTGCCAGCGGCTGCGCGCCATGGTGCGGAAGCGCCTCCCGGGCCCCGCCGCCATCGCCAAGATGAGGGACGAGGTGGACCAGCCGGCGACACCCAGAAGGTCGCGCTCCGTGGCGCCGATGTCGCCGCGGTCCGTGGCGCCGGCGGCGCCGATGACACCCATGTCGACGTCGGCGCGGCCGATGACTCCCACCATGTCAGCGCGGCCAATGACGCCCATGTCGGCGCGGCCGATGACGCCGCGCCGTGCCGCCGCGGCGGAGCACGAGACGCCCGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCAGCGAGCTGACCGAGGAGAACAAGCAGCTGAGCGACGCCCATGGCCAGACGGAGTCGTGGGCCTCCGCGCTGATCTCCGAGCTGGAGCAGTTCAGGGCCGCGAAGCTGCAGGGAGCAGCAGCATCTGAGATGAGCTTGCTCGACGATTTCGCCGAGATCGAGAGGTTGGAGATGGCTTCAGGTGGCCAAGGATTGAGATCGCCCAAGAATGCGCATTCGGAAGCGATTTCTTCAGAGAAGAATGATAAAGACACTGTCCTAGAAAATGGTATCTCTATCTCCAATGGCCAGCCTGAATGGGTTCAGGATATGTGCAAGCTTGTGATGCAGAAGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGATTTGAATGGATCATATGACTGGAGCATAATGAAGGAAATGGTGTTCAGCCTGACTGAAAAGATCACCTCTGTTATTGGCATATCTGAAGAAGGCAATGTTGCAAGTTCTCAAAAATTGCTGCTTGACAGGTCTGAATTTTGTGCTCGCCTTGAGCATTTGGTCCATGTCTGTCATGATCTACTGCATGGTAAAACTGACCTTGAAAAGTTTGTGCATGAGGTTTGTTTGGTTCTAGAGTATATAATCAACCAGTACAAGAATATATCATTCCAAGAACAACCAGACACTGTGAATAATAATACAGAGAATTTGGATGGAGAGGAATCATTTGGTAACATGAATGGTGGATGTGACATAAAAAGTCCGAAATCATCATCTGCTCCAGACATACAAACTGAAGCACTGGAAGAATCAATTCAGTCGGTAGAAGGCCGAAAAACAGATCATATTTTGGTTAACCAAGAAGAGAGTCAACTTGATGAAGAACTCACAAGAGTTATACTAGACCAGGACGAGAAAATCAGTCAGGAGAACTCAGCATCCTGTGAGATAGAAAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGCATTTAGCATCAAGTTCAGAGATATCAGCAGCGGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCGGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATATGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGGTCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAAT ]
[+] EMBL CB669319 [GAGAGCCAGAAGAAGATCGCGCTGCTGGAGGGCGAGTGCCAGCGGCTGCGCGCCATGGTGCGGAAGCGCCTCCCGGGCCCCGCCGCCATCGCCAAGATGAGGGACGAGGTGGACCAGCCGGCGACACCCAGAAGGTCGCGCTCCGTGGCGCCGATGTCGCCGCGGTCCGTGGCGCCGGCGGCGCCGATGACACCCATGTCGACGTCGGCGCGGCCGATGACTCCCACCATGTCAGCGCGGCCAATGACGCCCATGTCGGCGCGGCCGATGACGCCGCGCCGTGCCGCCGCGGCGGAGCACGAGACGCCCGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCATCGAGCTGACCGAGGAGAACAAGC ]
[+] EMBL CB640895 [ CGTGCCGCCGCGGCGGAGCACGAGACGCCCGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCAGCGAGCTGACCGAGGAGAACAAGCAGCTGAGCGACGCCCATGGCCAGACGGAGTCGTGGGCCTCCGCGCTGATCTCCGAGCTGGAGCAGTTCAGGGCCGCGAAGCTGCAGGGAGCAGCAGCATCTGAGATGAGCTTGCTCGACGATTTCGCCGAGATCGAGAGGTTGGAGATGGCTTCAGGTGGCCAAGGATTGAGATCGCCCAAGAATGCGCATTCGGAAGCGATTTCTTCAGAGAAGAATGATAAAGACACTGTCCTAGAAAATGGTATCTCTATCTCCAATGGCCAGCCTGAATGGGTTCAGGATATGTGCAAGCTTGTGATGCAGAAGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGAT ]
[+] EMBL AK058581 [ AGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGATTTGAATGGATCATATGACTGGAGCATAATGAAGGAAATGGTGTTCAGCCTGACTGAAAAGATCACCTCTGTTATTGGCATATCTGAAGAAGGCAATGTTGCAAGTTCTCAAAAATTGCTGCTTGACAGGTCTGAATTTTGTGCTCGCCTTGAGCATTTGGTCCATGTCTGTCATGATCTACTGCATGGTAAAACTGACCTTGAAAAGTTTGTGCATGAGGTTTGTTTGGTTCTAGAGTATATAATCAACCAGTACAAGAATATATCATTCCAAGAACAACCAGACACTGTGAATAATAATACAGAGAATTTGGATGGAGAGGAATCATTTGGTAACATGAATGGTGGATGTGACATAAAAAGTCCGAAATCATCATCTGCTCCAGACATACAAACTGAAGCACTGGAAGAATCAATTCAGTCGGTAGAAGGCCGAAAAACAGATCATATTTTGGTTAACCAAGAAGAGAGTCAACTTGATGAAGAACTCACAAGAGTTATACTAGACCAGGACGAGAAAATCAGTCAGGAGAACTCAGCATCCTGTGAGATAGAAAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGCATTTAGCATCAAGTTCAGAGATATCAGCAGCGGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCGGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATCTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGGTCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAAT ]
[-] EMBL CB669320 [ GAGATAGAAAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGCATTTAGCATCAAGTTCAGAGATATCAGCAGCGGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCGGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATCTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGGTCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAATTTAATAAGTTAAAAATTTGTTCTTGTTCAAAAAAAAGA]
[-] EMBL CA762879 [ AGGCAATCTAGACAGCCCAAGGTCCACCTCCAGACCAAGCTTATTTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGATCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTAAGGCCTCCATGGTTGTGTAAATGTTAATTTAATAAGTTAAAAATTCGTTCTTGTTCAAAAAAAAaa]
[+] EMBL BI805161 [ ATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGATCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGAC AATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAATTTAATAAGTTAAAAATTCGTTCTTGTTCAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||