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Oryza sativa
cluster # 10420 cluster # 10420       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10420#0 length = 1753 sequences # 6  
consensus_10420#1 length = 781 sequences # 1  

consensusID : consensus_10420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1753
fasta sequence
                              [GTACTTCTCCCCTCCCCCTTCTCGCCGCTCTACTCAATTCCGCCGTCAAAGTCTTCGATTGATCCGATCTCTCGTCTCGTCTCGTCCTCCCCATCGGAACCCTAGCCGCCTCCCGTGCCCGCGCCCGCGCCGCCACATGGAGCCGAAGCCAAGCACGCCGACGGCCGCGGCGACCCCGCGGTTTAAGCTGGGGAAGCAGTCGTCGATGGCGCCCGACCGCGGCGGTGCGGGGGAGAGCTCGGAGGAGGGGTCGAGCGAGGCGGTCGGGGTCATGGGCTTCCAGCTGATGTACATGGCCCACGAGGGCGACGTCGAGGGGATCCAGGAGCTCCTCGACGCCGGCGCCGACCCCAACTTCCGCGACTCCGACGGCCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGTCGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGCCTTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGGCTCCAAGCTTAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGAGATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCAAAGGGTACATTTAGGAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTATGGACGAGAACAAAGTACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCATCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAGCCCAATGATGATTGTAATGGAATTTATGCCCAAGGGTGATTTGCGCAAGCACTTGAGTAGGAAAGGGGCTCTGGAACCGTCATATGCAGTGAAATTAGCTCTTGATATTGCAAGAGGGATGAATTATTTACATGAGCATAAACCTCAAGCTATCATCCACCGTGACCTTGAGCCTTCAAACATATTGAGGGATGACACTGGACATCTGAAGGTGGCAGATTTCGATCTGTGTAAGATGCTAAAATGGAGAAGAAAAGTTAGAGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGCCTGTTGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATACCATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCACAATGCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGACTGTTGAAAAAAAAAAAAAAAA]

[+] EMBL AK071920             [GTACTTCTCCCCTCCCCCTTCTCGCCGCTCTACTCAATTCCGCCGTCAAAGTCTTCGATTGATCCGATCTCTCGTCTCGTCTCGTCATCCCCATCGGAACCCTAGCCGCCTCCCGTGCCCGCGCCCGCGCCGCCACATGGAGCCGAAGCCAAGCACGCCGACGGCCGCGGCGACCCCGCGGTTTAAGCTGGGGAAGCAGTCGTCGATGGCGCCCGACCGCGGCGGTGCGGGGGAGAGCTCGGAGGAGGGGTCGAGCGAGGCGGTCGGGGTCATGGGCTTCCAGCTGATGTACATGGCCCACGAGGGCGACGTCGAGGGGATCCAGGAGCTCCTCGACGCCGGCGCCGACCCCAACTTCCGCGACTCCGACGGCCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGTCGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGCCTTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGGCTCCAAGCTTAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGAGATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCAAAGGGTACATTTAGGAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTATGGACGAGAACAAA  ACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCATCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAGCCCAATGATGATTGTAATGGAATTTATGCCCAAGGGTGATTTGCGCAAGCACTTGAGTAGGAAAGGGGCTCTGGAACCGTCATATGCAGTGAAATTAGCTCTTGATATTGCAAGAGGGATGAATTATTTACATGAGCATAAACCTCAAGCTATCATCCACCGTGACCTTGAGCCTTCAAACATATTGAGGGATGACACTGGACATCTGAAGGTGGCAGATTTCGATCTGTGTAAGATGCTAAAATGGAGAAGAAAAGTTAGAGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGCCTGTTGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATACCATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCACAATGCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGACTGT                  ]
[+] EMBL AK104674             [             CCCCCTTCTCGCCGCTCTACTCAATTCCGCCGTCAAAGTCTTCGATTGATCCGATCTCTCGTCTCGTCTCGTCCTCCCCATCGGAACCCTAGCCGCCTCCCGTGCCCGCGCCCGCGCCGCCACATGGAGCCGAAGCCAAGCACGCCGACGGCCGCGGCGACCCCGCGGTTTAAGCTGGGGAAGCAGTCGTCGATGGCGCCCGACCGCGGCGGTGCGGGGGAGAGCTCGGAGGAGGGGTCGAGCGAGGCGGTCGGGGTCATGGGCTTCCAGCTGATGTACATGGCCCACGAGGGCGACGTCGAGGGGATCCAGGAGCTCCTCGACGCCGGCGCCGACCCCAACTTCCGCGACTCCGACGGCCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGTCGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGCCTTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGGCTCCAAGCTTAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGAGATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCAAAGGGTACATTTAGGAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTATGGACGAGAACAAAGTACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCATCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAGCCCAATGATGATTGTAATGGAATTTATGCCCAAGGGTGATTTGCGCAAGCACTTGAGTAGGAAAGGGGCTCTGGAACCGTCATATGCAGTGAAATTAGCTCTTGATATTGCAAGAGGGATGAATTATTTACATGAGCATAAACCTCAAGCTATCATCCACCGTGACCTTGAGCCTTCAAACATATTGAGGGATGACACTGGACATCTGAAGGTGGCAGATTTCGATCTGTGTAAGATGCTAAAATGGAGAAGAAAAGTTAGAGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGCCTGTTGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATACCATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCACAATGCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGACTGTTG                ]
[+] EMBL CB638172             [                                       CCGCCGTCAAAGTCTTCGATTGATCCGATCTCTCGTCTCGTCTCGTCCTCCCCATCGGAACCCTAGCCGCCTCCCGTGCCCGCGCCCGCGCCGCCACATGGAGCCGAAGCCAAGCACGCCGACGGCCGCGGCGACCCCGCGGTTTAAGCTGGGGAAGCAGTCGTCGATGGCGCCCGACCGCGGCGGTGCGGGGGAGAGCTCGGAGGAGGGGTCGAGCGAGGCGGTCGGGGTCATGGGCTTCCAGCTGATGTACATGGCCCACGAGGGCGACGTCGAGGGGATCCAGGAGCTCCTCGACGCCGGCGCCGACCCCAACTTCCGCGACTCCGACGGCCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGTCGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGCCTTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGGCTCCAAGCTTAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB674762             [                                                             ATCCGATCTCTCGTCTCGTCTCGTCCTCCCCATCGGAACCCTAGCCGCCTCCCGTGCCCGCGCCCGCGCCGCCACATGGAGCCGAAGCCAAGCACGCCGACGGCCGCGGCGACCCCGCGGTTTAAGCTGGGGAAGCAGTCGTCGATGGCGCCCGACCGCGGCGGTGCGGGGGAGAGCTCGGAGGAGGGGTCGAGCGAGGCGGTCGGGGTCATGGGCTTCCAGCTGATGTACATGGCCCACGAGGGCGACGTCGAGGGGATCCAGGAGCTCCTCGACGCCGGCGCCGACCCCAACTTCCGCGACTCCGACGGCCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGTCGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGCCTTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGGCTCCAAGCTTAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGAGATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCAAAGGGTACATTTAGGAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTATGGACGAGAACAAAGTACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCATCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB674763             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CATGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGAGGTCTTTTCATTTGCTTTGATACTTCAAGAGATGATTGAAGGATGTCTCCCTTTTTATGCCAAGAAAAATAATGAAATTGAGAAGGCACATAATTTTAAAGAAAGGCCCCCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGTTAGCAGGCCTGACTTTAGAACGATCATTGACCAATTGTTTTATATCCAGAATGAAATATTTCAGAGAACCCGTTGGAAGGTGAACCCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCCCCACTCGTTCATCACGTTCATGGAGATCCTATTTTTACCAGTCAGTTGGGCCTGTTGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATCCCATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCCCAATGCGGTTGTCCATCAGCCACCATTGAAAGCAATCCAAACTGGAATATCCAGCCT                    ]
[+] EMBL AU094692             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGCCTGTTGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATACCATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCACAATGCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGNCTAAAAAAAAAAAAAAAAAAAA]


>consensus_10420#0 GTACTTCTCCCCTCCCCCTTCTCGCCGCTCTACTCAATTCCGCCGTCAAAGTCTTCGATT GATCCGATCTCTCGTCTCGTCTCGTCCTCCCCATCGGAACCCTAGCCGCCTCCCGTGCCC GCGCCCGCGCCGCCACATGGAGCCGAAGCCAAGCACGCCGACGGCCGCGGCGACCCCGCG GTTTAAGCTGGGGAAGCAGTCGTCGATGGCGCCCGACCGCGGCGGTGCGGGGGAGAGCTC GGAGGAGGGGTCGAGCGAGGCGGTCGGGGTCATGGGCTTCCAGCTGATGTACATGGCCCA CGAGGGCGACGTCGAGGGGATCCAGGAGCTCCTCGACGCCGGCGCCGACCCCAACTTCCG CGACTCCGACGGCCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGT CGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGCC TTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGG CTCCAAGCTTAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGA GATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCAAAGGGTACATTTAG GAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTAT GGACGAGAACAAAGTACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCA TCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAGCCCAATGATGATTGTAAT GGAATTTATGCCCAAGGGTGATTTGCGCAAGCACTTGAGTAGGAAAGGGGCTCTGGAACC GTCATATGCAGTGAAATTAGCTCTTGATATTGCAAGAGGGATGAATTATTTACATGAGCA TAAACCTCAAGCTATCATCCACCGTGACCTTGAGCCTTCAAACATATTGAGGGATGACAC TGGACATCTGAAGGTGGCAGATTTCGATCTGTGTAAGATGCTAAAATGGAGAAGAAAAGT TAGAGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGT CCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCA AGAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGC ACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATT GAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAAC GATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGT GAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGG CAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGCCTGT TGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATACC ATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCACAAT GCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGACTGTTGAAA AAAAAAAAAAAAA



consensusID : consensus_10420#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 781
fasta sequence
                              [AGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGAGGTAAAAGTGTTGCTATGCAACATTCTGTATTCCTGTGCCACTATGAACTGTAAAGTAAAACTGCTGAACCTACTCCCAGAGCCCCCTAGAAGACCAGTTTTTGTACTGATATTCCAAACATTTTCAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGCCTGTTGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATACCATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCACAATGCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGACTGTTG]

[-] EMBL CB673933             [AGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGAGGTAAAAGTGTTGCTATGCAACATTCTGTATTCCTGTGCCACTATGAACTGTAAAGTAAAACTGCTGAACCTACTCCCAGAGCCCCCTAGAAGACCAGTTTTTGTACTGATATTCCAAACATTTTCAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGCCTGTTGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATACCATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCACAATGCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGACTGTTG]


>consensus_10420#1 AGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGTCCT GCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGA GGTAAAAGTGTTGCTATGCAACATTCTGTATTCCTGTGCCACTATGAACTGTAAAGTAAA ACTGCTGAACCTACTCCCAGAGCCCCCTAGAAGACCAGTTTTTGTACTGATATTCCAAAC ATTTTCAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGA AGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACG GATTGAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTA GAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGA AGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATG AGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGC CTGTTGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATA TACCATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCA CAATGCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGACTGTT G



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10420#0      GTACTTCTCCCCTCCCCCTTCTCGCCGCTCTACTCAATTCCGCCGTCAAAGTCTTCGATT 60
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      GATCCGATCTCTCGTCTCGTCTCGTCCTCCCCATCGGAACCCTAGCCGCCTCCCGTGCCC 120
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      GCGCCCGCGCCGCCACATGGAGCCGAAGCCAAGCACGCCGACGGCCGCGGCGACCCCGCG 180
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      GTTTAAGCTGGGGAAGCAGTCGTCGATGGCGCCCGACCGCGGCGGTGCGGGGGAGAGCTC 240
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      GGAGGAGGGGTCGAGCGAGGCGGTCGGGGTCATGGGCTTCCAGCTGATGTACATGGCCCA 300
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      CGAGGGCGACGTCGAGGGGATCCAGGAGCTCCTCGACGCCGGCGCCGACCCCAACTTCCG 360
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      CGACTCCGACGGCCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGT 420
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      CGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGCC 480
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      TTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGG 540
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      CTCCAAGCTTAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGA 600
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      GATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCAAAGGGTACATTTAG 660
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      GAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTAT 720
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      GGACGAGAACAAAGTACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCA 780
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      TCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAGCCCAATGATGATTGTAAT 840
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      GGAATTTATGCCCAAGGGTGATTTGCGCAAGCACTTGAGTAGGAAAGGGGCTCTGGAACC 900
consensus_10420#1      ------------------------------------------------------------
                                                                                   

consensus_10420#0      GTCATATGCAGTGAAATTAGCTCTTGATATTGCAAGAGGGATGAATTATTTACATGAGCA 960
consensus_10420#1      -----------------------------------------------AGAAGAGAAAGCT 13
                                                                      *        *** 

consensus_10420#0      TAAACCTCAAGCTATCATCCACCGTGACCTTGAGCCTTCAAACATATTGAGGGATGACAC 1020
consensus_10420#1      GTAACTTCTCCAGGCAATGCAT-GTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGA 72
                         *** **        ** **  **     **   ** ** *  *  ** *  ****   

consensus_10420#0      TGGACATCTGAAGGTGGCAGATTTCGATCTGTGTAAGATGCTAAAATGGAGAAGAAAAGT 1080
consensus_10420#1      ATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAA-GAGGTAAAAGTGT 131
                            **   ** ****  *  ***    *   *  *** **  ** *  * * **  **

consensus_10420#0      TAGAGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGT 1140
consensus_10420#1      TGCTATGCAACATTCTGTA--TTCCTGTGCCACTATGAACTGTAAAGTAAAACTGCTGAA 189
                       *       *  *  *****  ***    * ** *       *  * ***   *       

consensus_10420#0      CCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCA 1200
consensus_10420#1      CCTACT---CCCAGAGCCCCCTAGAAGACCAGTTTTTGTACTGATATTCCAAACATTTTC 246
                       *** *       ***      **  * *   * * *  *     *       * * **  

consensus_10420#0      AGAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGC 1260
consensus_10420#1      AG--ATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGC 304
                       **  ********************************************************

consensus_10420#0      ACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATT 1320
consensus_10420#1      ACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATT 364
                       ************************************************************

consensus_10420#0      GAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAAC 1380
consensus_10420#1      GAGAGAGCTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAAC 424
                       ************************************************************

consensus_10420#0      GATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGT 1440
consensus_10420#1      GATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGT 484
                       ************************************************************

consensus_10420#0      GAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGG 1500
consensus_10420#1      GAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGG 544
                       ************************************************************

consensus_10420#0      CAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGCCTGT 1560
consensus_10420#1      CAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAACAGTCAGTTGGGCCTGT 604
                       ************************************************************

consensus_10420#0      TGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATACC 1620
consensus_10420#1      TGTTGATTTCGTGTGGAGGATTGTATGCATGATTGATAGAAAATCAACTCATTATATACC 664
                       ************************************************************

consensus_10420#0      ATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCACAAT 1680
consensus_10420#1      ATAGATTTGTGTTTCACTGGAAATAGTTTTGCAACTTGTTGCTTCACTGTCGATCACAAT 724
                       ************************************************************

consensus_10420#0      GCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGACTGTTGAAA 1740
consensus_10420#1      GCGGTTGTACATCAGACAGCATTGAAAGCAATACAAACTGGAATATACAGACTGTTG--- 781
                       *********************************************************   

consensus_10420#0      AAAAAAAAAAAAA 1753
consensus_10420#1      -------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)