These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10441#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3509 fasta sequence [CAGCTAGCTTATCGATCGGCATGGGCATGGCGGCCGTCCTGCTCCTCTCCTTTCTCCTCTTGGCCGCCCCCGCCGCGGCCATCAATATCCTCCGGCGCTCCCTCGCCGCGCAGACCAAAGGAGACCTCGCCTCCATCACCGCTGGGAACCCCCTCGTCGCCAATGCCATGAACGACCGCCTCAAGAACCTCACCGACGCATTTGCTCAGCAGATGGGCAAGGAGTTCCACTACTGCATCAAGGACACGGACGACGAGTGGAATATCGCCTTCAATTTCTCCACTGATCCCACCTTCCTCTCCAACTGCATGCAGGCCACCGATGGAGACGTACCGCAGCGTGTGTGCACAGCCGCTGAGATGAAGTTCTACTTTGAAAGCTTCCTCGACAGCAATGGAAGAAAGAACTACGTGAGGCCCAACAAGAACTGCAACCTCACATCATGGATGGATGGCTGTGAGGCTGGCTGGGCATGCAGTGCAGGCCCGGACCAGAATATCAACTTGCAGGATGCCGTCAACTTCCCTTCCAGAACACTTGATTGCCGAGGCTGCTGTGCTGGATTCTTCTGCCCTCACGGCCTCACTTGCATGATACCTTGCCCTTTGGGAGCATACTGTCCAGAATCTACCTTAAACAAAACCACCGGGATCTGTGACCCATACAACTATCAGCCACCTCCT-GGGAAGCCGAATCATACTTGTGGTGGTGCT-GAT-AGAT-GGGCAGATGTTGTT-AGCACCGATGATGTTTTCTGCCCAGCCGGCTTCTACTGTCCAAGCACTATAAAGAAACTCTCTTGTAGTAGTGGTTTCTATTGCAGGAAGGGATCAACTTCCCAAACCAAATGCTTCCACAAGGGCAGCTGTAAACCAAACTCTGTAAAT-CAGGACATTACAATATTTGGTGCATTG-CTTGTGGGTG-CCTTGAGTTTA-GTACTGTTGATCATTTACAACTTCTCAGGGCAACTTCTGACCAACCGAGAGAAAAAGCAAGCAAAATCTAGGGAGGCTGCAGCAAGACACGCAAAAGAGACTGCCATGGCTCGTGAAAGGTGGAAATCAGCTAAAGATGTTGCCAAGAAGCACGCCGTTGGGCTGCAGTCATCGCTGTCCCGCACATTCTCGCGCAAGAAAACTCTTAGGACACACGAGCCATCCAAAGGAGCGGTTGAAACTGATGTGGAGCCATCGAAAGGATCAGGAGAAAAGAAGAGTAATCTTACTGACATGATGCGCTCGCTTGAAGAGAACCCGGAAAAAGGAGAAGGCTTCAATGTGGAAATAGGAGAAAAAAAGAAAACTAAAGGGAGGCATGCACACACTCAGAGCCAAATTTTCAAGTATGCATATGGACAGATTGAGAAGGAAAAGGCAATGGAACAGCAGAATAAAAATCTGACCTTTTCAGGTGTGATATCTATGGCCACCGATGAAGATATCAGGACAAGACCTAGAATTGAGATTGCTTTCAAAGACCTTACTCTAACCTTAAAGGGGAGTAAGAAAAAAACTGTTAAGGTCTGTGACCGGAAAGCTTATGCCTGGTCGGGTAGCTGCTGTGATGGGCCCATCAGGTGCAGGGAAGACCACATTCTTGAGTGCAATTGCAGGTAAGGCAACTGGATGCGAGACAACAGGTATGGTACTTATCAATGGGAAAATGGAACCCATCCGTGCGTACAAGAAAATCATTGGCTTTGTCCCACAAGATGACATTGTCCATGGGAACTTGACTGTTCAGGAGAATCTTTGGTTTAATGCACGATGCAGGCTTTCTGCTGACATGTCAAAAGCTGACAAGGTTCTTGTTGTGGAAAGAGTTATCGAGGCTTTGGGACTGCAAGCAGTTCGTGATTCTTTGGTTGGAACTGTCGAACAGCGTGGCATCTCTGGTGGCCAGCGTAAACGAGTAAATGTTGGGCTAGAAATGGTCATGGAACCCTCTGTGTTGATTTTAGATGAGCCAACGTCTGGTTTGGACAGCTCTTCGTCTCTGCTTTTACTTCGTGCACTACGGCGGGAAGCTCTTGAAGGTGT-GAACATCTCTATGGTGGTTCATCAACCCAGCTATACATTGTATAAGATGTTTGGTGATTTGATACTTCTCGCGAAAGGTGGCTTGACGGTTTACCATGGACCTGTGAAGAAAGTGGAGGAATACTTTTCAGGATTGGGGATTGTTGTCCCAGATCGTGTGAACCCGCCAGACTACTACATAGACATCTTGGAGGGAATTGTGAAGCCAAACGCAAATGTTGCAGTTAATGCCAAAGATCTCCCTCTGCGATGGATGCTGCACAATGGGTATGAAGTTCCACGGGATATGCTGCAGAGTGGTTCTGATGCAGAATCGTCGTTTAGGGGAGGAGGGGATCTTACCCCTGGCGGTGACACTGGGCAGTCTATTGCTGGTGAAGTGTGGGGCAATGTCAAGGACATAGTTGGGCAGAAGAAGGATGAGTATGATTACAACAAATCTTCTCAAAACTTATCTAATCGATGCACTCCTGGCATTCTCAGGCAGTACAAGTACTACCTGGGGAGGTGTGGCAAGCAAAGGCTCCGTGAAGCTAGAATACAAGGCGTTGACTATCTGATCCTGGGCCTTGCTGGTATATGTCTAGGGACATTAGCTAAAGTGAGCGACGAGACGTTTGGAGCACTCGGTTACACATACACTGTCATTGCCGTCTCTCTGCTGCGCAAGATTGGAGCGCTGAGATCATTCTCTCTGGAGAAGATACACTACTGGAGGGAGAGAGCATCTGGAATGAGCTCGTTGGCGTACTTCATGTCGAAAGACACAATAGATCACTTCAACACGATCATCAAGCCGATCGTTTACCTGTCCATGTTCTACTTCTTCAACAACCCAAGGTCGTCGATATGGGAGAACTACGTAGTTCTTGTGGCGCTGGTGTACTGCGTGACAGGGATCGGCTACACATTTGCGATATTCTTCCAGCCAGGATCGGCACAGCT-----GTGGTCAGCGCTGCTTCCGGTAGTGCTGACTCTGATAGCAACGCAGCAGAAGGACACCTTCTTCGCGAACCTGTGCTACACCAAGTGGGCG-CTGGAAGGG-TTCGTGATCGCGAATGCGCAGAGGTACTCGGGCGTGTGGCTCATAACGCGATGCGGCTCCCTCCTCAAGAGCGGCTACGACATCAACGACAGGTTCCTCTGCA-TTCTCGTCCTCGCCGCCAACGGTGTCCTCTTCCGCTGCGTCGCCTTCTTCTGCATGGTCATCTTCCAGAAGCACTGATGCCTGCCTGCCTGCCTGTCTCCTCTACTGTACATCTATCTCCATCTATTATACTCTCTCTAGTACTACTGTACTTTCTACTCTCTAGCTAGCTAGCAGCAGCATCTGTGAGCATGTACTGTACTTGTGTATCCTACTAATGAATCCTAGCTAAGCTAGT-AGATCGATCCTATCCTATGTAAGATCTTACGAGTTGCCAAAAAAAAAAAAGGAAAGGAATGGCCCATTTAAGTAAAAAAAAAAAAAAA] [+] EMBL AK071489 [CAGCTAGCTTATCGATCGGCATGGGCATGGCGGCCGTCCTGCTCCTCTCCTTTCTCCTCTTGGCCGCCCCCGCCGCGGCCATCAATATCCTCCGGCGCTCCCTCGCCGCGCAGACCAAAGGAGACCTCGCCTCCATCACCGCTGGGAACCCCCTCGTCGCCAATGCCATGAACGACCGCCTCAAGAACCTCACCGACGCATTTGCTCAGCAGATGGGCAAGGAGTTCCACTACTGCATCAAGGACACGGACGACGAGTGGAATATCGCCTTCAATTTCTCCACTGATCCCACCTTCCTCTCCAACTGCATGCAGGCCACCGATGGAGACGTACCGCAGCGTGTGTGCACAGCCGCTGAGATGAAGTTCTACTTTGAAAGCTTCCTCGACAGCAATGGAAGAAAGAACTACGTGAGGCCCAACAAGAACTGCAACCTCACATCATGGATGGATGGCTGTGAGGCTGGCTGGGCATGCAGTGCAGGCCCGGACCAGAATATCAACTTGCAGGATGCCGTCAACTTCCCTTCCAGAACACTTGATTGCCGAGGCTGCTGTGCTGGATTCTTCTGCCCTCACGGCCTCACTTGCATGATACCTTGCCCTTTGGGAGCATACTGTCCAGAATCTACCTTAAACAAAACCACCGGGATCTGTGACCCATACAACTATCAGCCACCTCCT GGGAAGCCGAATCATACTTGTGGTGGTGCT GAT AGAT GGGCAGATGTTGTT AGCACCGATGATGTTTTCTGCCCAGCCGGCTTCTACTGTCCAAGCACTATAAAGAAACTCTCTTGTAGTAGTGGTTTCTATTGCAGGAAGGGATCAACTTCCCAAACCAAATGCTTCCACAAGGGCAGCTGTAAACCAAACTCTGTAAAT CAGGACATTACAATATTTGGTGCATTG CTTGTGGGTG CCTTGAGTTTA GTACTGTTGATCATTTACAACTTCTCAGGGCAACTTCTGACCAACCGAGAGAAAAAGCAAGCAAAATCTAGGGAGGCTGCAGCAAGACACGCAAAAGAGACTGCCATGGCTCGTGAAAGGTGGAAATCAGCTAAAGATGTTGCCAAGAAGCACGCCGTTGGGCTGCAGTCATCGCTGTCCCGCACATTCTCGCGCAAGAAAACTCTTAGGACACACGAGCCATCCAAAGGAGCGGTTGAAACTGATGTGGAGCCATCGAAAGGATCAGGAGAAAAGAAGAGTAATCTTACTGACATGATGCGCTCGCTTGAAGAGAACCCGGAAAAAGGAGAAGGCTTCAATGTGGAAATAGGAGAAAAAAAGAAAACTAAAGGGAGGCATGCACACACTCAGAGCCAAATTTTCAAGTATGCATATGGACAGATTGAGAAGGAAAAGGCAATGGAACAGCAGAATAAAAATCTGACCTTTTCAGGTGTGATATCTATGGCCACCGATGAAGATATCAGGACAAGACCTAGAATTGAGATTGCTTTCAAAGACCTTACTCTAACCTTAAAGGGGAGTAAGAAAAAAACTGTTAAGGTCTGTGACCGGAAAGCTTATGCCTGGTCGGGTAGCTGCTGTGATGGGCCCATCAGGTGCAGGGAAGACCACATTCTTGAGTGCAATTGCAGGTAAGGCAACTGGATGCGAGACAACAGGTATGGTACTTATCAATGGGAAAATGGAACCCATCCGTGCGTACAAGAAAATCATTGGCTTTGTCCCACAAGATGACATTGTCCATGGGAACTTGACTGTTCAGGAGAATCTTTGGTTTAATGCACGATGCAGGCTTTCTGCTGACATGTCAAAAGCTGACAAGGTTCTTGTTGTGGAAAGAGTTATCGAGGCTTTGGGACTGCAAGCAGTTCGTGATTCTTTGGTTGGAACTGTCGAACAGCGTGGCATCTCTGGTGGCCAGCGTAAACGAGTAAATGTTGGGCTAGAAATGGTCATGGAACCCTCTGTGTTGATTTTAGATGAGCCAACGTCTGGTTTGGACAGCTCTTCGTCTCTGCTTTTACTTCGTGCACTACGGCGGGAAGCTCTTGAAGGTGT GAACATCTCTATGGTGGTTCATCAACCCAGCTATACATTGTATAAGATGTTTGGTGATTTGATACTTCTCGCGAAAGGTGGCTTGACGGTTTACCATGGACCTGTGAAGAAAGTGGAGGAATACTTTTCAGGATTGGGGATTGTTGTCCCAGATCGTGTGAACCCGCCAGACTACTACATAGACATCTTGGAGGGAATTGTGAAGCCAAACGCAAATGTTGCAGTTAATGCCAAAGATCTCCCTCTGCGATGGATGCTGCACAATGGGTATGAAGTTCCACGGGATATGCTGCAGAGTGGTTCTGATGCAGAATCGTCGTTTAGGGGAGGAGGGGATCTTACCCCTGGCGGTGACACTGGGCAGTCTATTGCTGGTGAAGTGTGGGGCAATGTCAAGGACATAGTTGGGCAGAAGAAGGATGAGTATGATTACAACAAATCTTCTCAAAACTTATCTAATCGATGCACTCCTGGCATTCTCAGGCAGTACAAGTACTACCTGGGGAGGTGTGGCAAGCAAAGGCTCCGTGAAGCTAGAATACAAGGCGTTGACTATCTGATCCTGGGCCTTGCTGGTATATGTCTAGGGACATTAGCTAAAGTGAGCGACGAGACGTTTGGAGCACTCGGTTACACATACACTGTCATTGCCGTCTCTCTGCTGCGCAAGATTGGAGCGCTGAGATCATTCTCTCTGGAGAAGATACACTACTGGAGGGAGAGAGCATCTGGAATGAGCTCGTTGGCGTACTTCATGTCGAAAGACACAATAGATCACTTCAACACGATCATCAAGCCGATCGTTTACCTGTCCATGTTCTACTTCTTCAACAACCCAAGGTCGTCGATATGGGAGAACTACGTAGTTCTTGTGGCGCTGGTGTACTGCGTGACAGGGATCGGCTACACATTTGCGATATTCTTCCAGCCAGGATCGGCACAGCTGGTAAGTGGTCAGCGCTGCTTCCGGTAGTGCTGACTCTGATAGCAACGCAGCAGAAGGACACCTTCTTCGCGAACCTGTGCTACACCAAGTGGGCG CTGGAAGGG TTCGTGATCGCGAATGCGCAGAGGTACTCGGGCGTGTGGCTCATAACGCGATGCGGCTCCCTCCTCAAGAGCGGCTACGACATCAACGACAGGTTCCTCTGCA TTCTCGTCCTCGCCGCCAACGGTGTCCTCTTCCGCTGCGTCGCCTTCTTCTGCATGGTCATCTTCCAGAAGCACTGATGCCTGCCTGCCTGCCTGTCTCCTCTACTGTACATCTATCTCCATCTATTATACTCTCTCTAGTACTACTGTACTTTCTACTCTCTAGCTAGCTAGCAGCAGCATCTGTGAGCATGTACTGTACTTGTGTATCCTACTAATGAATCCTAGCTAAGCTAGT ] [+] EMBL C99092 [ TCCAACTGCATGCAGGCCACCGATGGAGACGTACCGCAGCGTGTGTGCACCGCCGCTGAGATGAAGTTCTACTTTGAAAGCTTCCTCGACAGCAATGGAAGAAAGAACTACGTGAGGCCCAACAAGAACTGCAACCTCACATCATGGATGGATGGCTGTGAGGCTGGCTGGGCATGCAGTGCAGGCCCGGACCAGAATATCAACTTGCAGGATGCCGTCAACTTCCCTTCCAGAACACTTGATTGCCGAGGCTGCTGTGCTGGATTCTTCTGCCCTCACGGCCTCACTTGCATGATACCTTGCCCTTTGGGAGCATACTGTCCAGAATCTACCTTAAACAAAACCACCGGGATCTGTGACCCATACAACTATCAGCCACCTCCTGGGGAAGCCGAATCATAC TGTGGTGGTGCTGGATAAGATGGGGCAGATGTTGTTAAGCACC ] [+] EMBL C99093 [ TAACCCAAACTCTGTTAATCCAGGAC TTACCAAATTTGGTGCATTGCCTTGTGGGTGCCCTTGANTTTANTTACTGTTGATCATTTACAACTTCTCAGGGCAACTTCTGACCAACCGAGAGAAAAAGCAAGC AAATCTAGGGAGGCTGCAGCAAGACACGCAAAAGAGACTGCCATGGCTCGTGAAAGGTGGAAATCAGCTAAAGATGTTGCCAAGAAGCACGCCGTTGGGCTGCAGTCATCGCTGTCCCGCACATTCTCGCGCAAGAAAACTCTTAGGACACACGAGCCATCCAAAGGAGCGGTTGAAACTGATGTGGAGCCATCGAAAGGATCAGGAGAAAAGAAGAGTAATCTTACTGACATGATGCGCTCGCTTGAAGAGAACCCGGAAAAAGGAGAAGGCTTCAATGTGGAAATAGGAGAAAAAAA ] [+] EMBL CF295874 [ tggacTGAAGGAGTAGAA ATCTCTATGGTGGTTCATCAACCCAGCTATACATTGTATAAGATGTTTGATGATTTGATACTTCTCGCGAAAGGTGGCTTGACGGTTTACCATGGACCTGTGAAGAAAGTGGAGGAATACTTTTCAGGATTGGGGATTGTTGTCCCAGATCGTGTGAACCCGCCAGACTACTACATAGACATCTTGGAGGGAATTGTGAAGCCAAACGCAAATGTTGCAGTTAATGCCAAAGATCTCCCTCTGCGATGGATGCTGCACAATGGGTATGAAGTTCCACGGGATATGCTGCAGAGTGGTTCTGATGCAGAATCGTCGTTTAGGGGAGGAGGGGATCTTACCCCTGGCGGTGACACTGGGCAGTCTATTG ] [+] EMBL CA765304 [ aGGGGCACTCGGTTACACATACACTGTCATTGCCGTCTCTCTGCTGTGCAAGATTGGAGCGCTGAGATCCTTCTCTCTGGAGAAGATACACTACTGGAGGGAGAGAGCATCTGGAATGAGCTCGTTGGCGTACTTCATGTCGAAAGACACAATAGATCACTTCAACACGATCATCAAGCCGATCGTTTACCTGTCCGTGTTCTACTTCTTCAACAACCCAAGGTCGTCGATATGGGAGAACTACGTAGTTCTTGTGGCGCTGGTGTACTGAGTGACAGGGATCGGCTACACATTTGCGATATTCTTCCAGCCAGGATCGGCACAGCT GTGGTCAGCGCTGCTTCCGGTAGTGCTGACTCTGATAGCAACGCAGCAGAAGGACACCTTCTTCGCGAACCTGTGCTACACCAAGTGGGCGCCTGGAAGGGTTTCGTGATCGCGAATGCGCAGAGGTACTCGGGCGTGTGGCTCATAACGCGATGCGGCTCCCTCCTCAAGAGCGGCTACGACATCAACGACAGGTTCCTCTGCATTTCTCGTCCTCGCCGCCAACGGTGTCCTCTTCCGCGGCGTCGCCTTCTTCTGCATGGTCATCTTCCAGAAGCACTGATGCCTGCCTGCCTGCCTGTCTCCTCTACTGTACATCTATCTCCATCTATTATACTCTCTCTAGTACTACTGNACTTTCTACTCTCTAGCTAGCTAGCAGCAGCACCTGTGAGCATGTACTGNACTTGGGTATCCTACTAATGAATCCTAGCTAAGCTAGTAAAATCGGTCCTATNCTAT ] [-] EMBL CA759576 [ TCACCACGAT TTCAACCGGATCGTTTCCCTGTCCATGTTTTACTTCTTCAACAACCCAAGGTTGTCGATATGGGAGAACTACGTAGTTCCTGTGGCGCTGGTGTACTGCGTGACAGGGATGGGCTACACATNTGCGATA TCTTCCAGCCAGGATCGGCACAGCT GTGGTCAGCGCTGCTTCCGGTAGTGCTGACTCTGATAGCAACGCAGCAGAAGGACACCTTCTTCGCGAACCTGTGCTACACCAAGTGGGCG CTGGAAGGG TTCGTGATCGCGAATGCGCAGAGGTACTCGGGCGTGTGGCTCATAACGCGATGCGGCTCCCTCCTCAAGAGCGGCTACGACATCAACGACAGGTTCCTCTGCA TTCTCGTCCTCGCCGCCAACGGTGTCCTCTTCCGGGGCGTCGCCTTTTTTTGCATGGTCATCTTCCAGAAGCACTGATGCCTGCCTGCCTGCCTGTCTCCTCTACTGTACATCTATCTCCATCTATTATACTCTCTCTAGTACTACTGTACTTTCTACTCTCTAGCTAGCTAGCAGCAGCCCCTGTGGGCATGTACTGTACTTGTGTATCCTACTAATGAATCCTAGCTAAGCTAGT AGATCGATCCTATCCTATGTAAGATCTTACGAGTTGCCAAAAAAAAAAAAGGAAAGGAATGGCCCATTTAAGTAAAAAAAAAAAAAAA] [-] EMBL CF295875 [ GGCG CTGGAAGGG TTCGTGATCGCGAATGCGCAGAGGTACTCGGGCGTGTGGCTCATAACGCGATGCGGCTCCCTCCTCAAGAGCGGCTACGACATCAACGACAGGTTCCTCTGCA TTCTCGTCCTCGCCGCCAACGGTGTCCTCTTCCGCTGCGTCGCCTTCTTCTGCATGGTCATCTTCCAGAAGCACTGATGCCTGCCTGCCTGCCTGTCTCCTCTACTGTACATCTATCTCCATCTATTATACTCTCTCTAGTACTACTGTACTTTCTACTCTCTAGCTAGCTAGCAGCAGCATCTGTGAGCATGTACTGTACCTGTGTATCCTACTAATGAATCCTAGCTAAGCTAGT AGATAAATCCTATCCTATGTAAaaaaaa ] clustalw multiple alignements is not computed in this case 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Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||