These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10456#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1235 fasta sequence [AGTAAGCTAGAGATAGAGAGAGAGAGAGAGAGAGATGCCGGAGTACTGCGTCACCGGCGGGACGGGGTTCATCGCGTCGCACCTCATCCGCGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAGAGGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGA-CGAGCGGCTGCAGCTGGTGAAGGCCGACCTGATGGTGGAGGGTAGCTTCGACGACGCCGTCCGCGGCGTCAACGGCGTGTTCCACGCGGCGTCCCCCGTCGTGGTGGTCGGCAACAGCAGCAGCAACAACGGCAAGCCGAACGACGACGACGACGAGGAGGAGGTCCAGCAGCGGCTAGTGGAGCCGATCGTGCGCGGCGCGTCGAACGTGCTCCGCTCCTGCGCCAGGGCGTCGCCGCGCCCGCGCCGCGTGGTGTTCACCTCCTCCTGCTCCTGCGTCCGCTACGGCGCCGGCGCGGCGGCGGCGCTGAACGAGTCGCACTGGAGCGACGCCGCCTACTGCGCGGCGCACGGCCTCTGGTACGCCTACGCCAAGACGCTGGCGGAGAGGGAGGCGTG-GCGGCTGGCCAAGG-AGCGCGGCCTCGACATGGTCGCCGTGAACCCGTCCTTCGTCGTGGGCCCCATCCTGTCGCAAGCGCCGACGAGCACGGCGCTGATCGTGCTCGCCCTCCTCCGCGGCGAGCTCCCCAGGTACCCGAACACGACGGTGGGGTTCGTCCACGTGG-ACGACGCGGTGCTGGCCCACGTGGTGGCCATGGAGGACGCCAGGGCGTCGGGGCGGCTCATCTGCTCGTGCCACGTGGCGCACTGGTCGGAGATCGTGGGGTCGCTGAGGGAGAGGTACCCGGGGTACCCGATCCCCGCGGAGTGCGGCAGCCACAAGGGAGACGACAGGGCCCACAAGATGGACACCGCCAAGATCAGGGCTCTCGGCTTCCCGCCATTCCTCTCCGTGCAGCAGATGTTCGACGACTGCATCAAGAGCTTCCAGGACAAGGGCCTCCTTCCTCCTCAC-GCTTGATTCATATGATCCACACAATTAAGCTGCTTGATTAATTAACTAATTAATCTAATATTATTAAGGATCGGAATCAC-GTAGTACCGATCATATATATGTTCATCTCGAAATTAACTGCAAGTGTGAGATCGAGAATACACTAATACAGTGCTAATATATACTGATCAGTCGCCTGGTGAGTTATTAAAAAA] [+] EMBL AK106870 [AGTAAGCTAGAGATAGAGAGAGAGAGAGAGAGAGATGCCGGAGTACTGCGTCACCGGCGGGACGGGGTTCATCGCGTCGCACCTCATCCGCGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAGAGGATGAAGCCGAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGAGCGAGCGGCTGCAGCTGGTGAAGGCCGACCTGATGGTGGAGGGTAGCTTCGACGACGCCGTCCGCGGCGTCGACGGCGTGTTCCACGCGGCGTCCCCCGTCGTGGTGGTCGGCAACAGCAGCAGCAACAACGGCAAGCCGAACGACGACGACGACGAGGAGGAGGTCCAGCAGCGGCTAGTGGAGCCGATCGTGCGCGGCGCGTCGAACGTGCTCCGCTCCTGCGCCAGGGCGTCGCCGCGCCCGCGCCGCGTGGTGTTCACCTCCTCCTGCTCCTGCGTCCGCTACGGCGCCGGCGCGGCGGCGGCGCTGAACGAGTCGCACTGGAGCGACGCCGCCTACTGCGCGGCGCACGGCCTCTGGTACGCCTACGCCAAGACGCTGGCGGAGAGGGAGGCGTG GCGGCTGGCCAAGG AGCGCGGCCTCGACATGGTCGCCGTGAACCCGTCCTTCGTCGTGGGCCCCATCCTGTCGCAAGCGCCGACGAGCACGGCGCTGATCGTGCTCGCCCTCCTCCGCGGCGAGCTCCCCAGGTACCCGAACACGACGGTGGGGTTCGTCCACGTGG ACGACGCGGTGCTGGCCCACGTGGTGGCCATGGAGGACGCCAGGGCGTCGGGGCGGCTCATCTGCTCGTGCCACGTGGCGCACTGGTCGGAGATCGTGGGGTCGCTGAGGGAGAGGTACCCGGGGTACCCGATCCCCGCGGAGTGCGGCAGCCACAAGGGAGACGACAGGGCCCACAAGATGGACACCGCCAAGATCAGGGCTCTCGGCTTCCCGCCATTCCTCTCCGTGCAGCAGATGTTCGACGACTGCATCAAGAGCTTCCAGGACAAGGGCCTCCTTCCTCCTCAC GCTTGATTCATATGATCCACACAATTAAGCTGCTTGATTAATTAACTAATTAATCTAATATTATTAAGGATCGGAATCAC GTAGTACCGATCATATATATGTTCATCTCGAAATTAACTGCAAGTGTGAGATCGAGAATACACTAATA ] [+] EMBL AU064273 [ AGAGAGAGAGAGAGAGAGAGATGCCGGAGTACTGCGTCACCGGCGGGACGGGGTTCATCGCGTCGCACCTCATCCGCGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAGATGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGA CGAGCGGCTGCAGCTGGTGAAGGCCGACCTGATGGTGGAGGGTAGCTTCGACGACGCCGTCCGCGG GTCATCGGCGTGTTCCACGGGGCGTCCCCCGTCGTGGTGGTCGGCAACAGCAGCAGCAACAACGGCAAGNCGAACGACGACGACGACGAGGAGGAGGTCCAGCAGCGGCTAGTGGAGCCGATC ] [+] EMBL AU064304 [ CGGAGTACTGCGTCACCGGCGGGACGGGGTTCATCGCGTCGCACCTCATCCGCGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAGAGGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGA CGAGCGGCTGCAGCTGGTGAAGGCCGACCTGATGGTGGAGGGTAGCTTCGACGACGCCGTCCGCGGC TNAACGGCGTGTTCCACGCGGCGTCCCCCGTCGTGGTGGTCGGCAACAGCAGCAGCAACAACGGCAAGCCGAACGACGACGACGACGAGGAGGAGGTCCAGCAGCGGCTAGTGGAGCCGATCGTGCGCGGCGC TCGAACGTGCTCCGCTCCTGCGCCAGGGCGTCGCCGCGCCCGCGCCGCGTGGTGTTCA CTCCTCCTGCTCCTGCGTCCGCTACGGCGCCGGCGCGGCGGCGGCGCTGAACGAGTCGCACTGGAGCNACGCCGCCTACTGCGCGGCGCACGGNCTCTGGTACGCCTACGCCAAGACGCTGGCGGAGAGGGAGGCGTGNGCGGCTGGCCAAGGAAGCGCGGCCTCGACATGGTCGCCGTGAACCCGTCCTTCGTCGTGGGCCCCATCCTGTCGCAAGCGCCGACGAGCACGGCGCTGATCGTGCTCGCNCTCCTCCGCGGCGAGCTCCCCAGGTACCCGAACACGACGGTGGGG TCCT CACGTGGAACAACCAGGTGCTGGCCCACGTGGTNGCCAT GAGGACG CAAGGNGT AGGGCGGt ] [+] EMBL AU064313 [ CGGAGTACTGCGTCACCGGCGGGACGGGGTTCATCGCGTCGCACCTCATCCGCGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAGAGGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGA NGAGCGGCTNCAGCTNGTGAAGGCCGACCTGATGGTGGAGGGTAGCTTCGACGACGNCGTCCGCGG GTGAACGGCGTGTTCCACG GGCGTCCCCCGTCGTGGTGGTCGGCAACAGCAGCAGCAACAACGGCAAGCCGAACGACGACGACGACGAGGAGGAGGTNCAGCAGCGGNTAGTGGAGCCGATCGTNCGCGGCG GTCGAACGTGCTTCGTTCCTGC ] [+] EMBL AU172746 [ GCGGCTCATCTGCTCGTGCCACGTGGCGCACTGGTCGGAGATCGTGGGGTCGCTGAGGGAGAGGTACCCGGGGTACCCGATCCCCGCGGAGTGCGGCAGCCACAAGGGAGACGACAGGGCCCACAAGATGGACACCGCCAAGATCAGGGCTCTCGGCTTCCCGCCATTCCTCTCCGTGCAGCAGATGTTCGACGACTGCATCAAGAGCTTCCAGGACAAGGGCCTCCTTCCTCCTCACGGCTTGATTCATATGATCCACACAATTAAGCTGCTTGATTAATTAACTAATTAATCTAATATTATTAAGGATCGGAATCACGGTAGTACCGATCATATATATGTTCATCTCGAAATTAACTGCAAGTGTGAGATCGAGAATACACTAATACAGTGCTAATATATACTGATCAGTCGCCTGGTGAGTTATTAAAAAA] [+] EMBL AU182677 [ CTGCTCGTGCCACGTGGCGCACTGGTCGGAGATCGTGGGGTCGCTGAGGGAGAGGTACCCGGGGTACCCGATCCCCGCGGAGTGCGGCAGCCACAAGGGAGACGACAGGGCCCACAAGATGGACACCGCCAAGATCAGGGCTCTCGGCTTCCCGCCATTCCTCTCCGTGCAGCAGATGTTCGACGACTGCATCAAGAGCTTCCAGGACAAGGGCCTCCTTCCTCCTCACGGCTTGATTCATATGATCCACACAATTAAGCTGCTTGATTAATTAACTAATTAATCTAATATTATTAAGGATCGGAATCAC GTAGTACCGATCATATATATGTTCATCTCGAAATTAACTGCAAGTGTGAGATCGAGAATACACTAATACAGTGCTAATATATACTGATCAGTCGCCTGGTGAGTTATTAAAAAA] [+] EMBL AU082982 [ CGCGGANTNCGGCAGCCACAAGGGAGACGACAGGGCCCACAAGATGGACACCGCCAAGATCAGGGCTCTCGGCTTCCCGCCATTCCTCTCCGTGCAGCAGATGTTCGACGACTGCATCAAGAGCTTCCAGGACAAGGGCCTCCTTCCTCCTCAC GCTTGATTCATATGATCCACACAATTAAGCTGCTTGATTAATTAACTAATTAATCTAATATTATTAAGGATCGGAATCAC GTAGTACCGATCATATATATGTTCATCTCGAAATTAACTGCAAGTGTGAGATCGAGAATACACTAATACAGTGCTAATATATACTGATCAGTCGCCTGGTGAGTTATTAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||