These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10466#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1742 fasta sequence [GGACATGAAGCTGCAATGGCAGCATGTCTGGTCGTAGTCAACTAGCCAGCCACCAAAGAGAGAGCTATCATCCATGGCCGCCGTGGC-GCGGCCGA-G-AAGGCGGTGAGGTGCCTCGGCCGCGGCTTCGACA-TGGCCGGCGACCTGAGGCTCAAGTACTGCAAGGGCGGCGGCG-CGGCTGCCTGGTCGAGAGGCGCGGCGAGACGACGCCGCTCACCGTG-CCGGGAGTCGGGGTGATCGCCGACGTG-CCGG-CCGACGTGAGG-TGCGACAAGGG-CGACCGCG-TCCGG-TTC-AAGTCCGACGTGC-TCGAGTTCAAC-AAGATGTCGGAGC-TG-TTCAACCAGA-GGAG--TTCGG-T--GGAAGGGAAGATCCCGTCGGGGCAGTTCAACGCGTCATTCGACCTGGACAGCGGGTCGTGGGCCCACGACGCGCCGCACACCAGGTGCCTCGCTATGGACGGGTACTTCATCTCCCTCTTTGACCTCCGTCTCGACCACCGCCACCTCGCCCTCGATGCAGGTGTCCTCGCCGACGTGCCACCCGCCTGGGACCCCTCTGCCATCGCAAGATTCATCGAGAAGTATGGGACGCATGTGATCGTGGGGCTGAGCATGGGCGGCCAGGACGTCGTCTACGTGAAGCAGGATAAGTCGTCTTCTCTGTCGCCGTCGGAGATCAAGGAGCATCTTGACAGGCTCGGCGATCAGCTCTTCACCGGGACATGCGCCATGCCACCTCTGCACTGCAGGTCCAAGGACAAGTTCAAGATACCGGAGGCCTTCAACGTGTTCGATGCACAAGTAGCTCAGCAGAGGCTTCACGGGATCACCACTCTTGTATCAAGCAAGGAGGGTGTGACGGTGATATACTCCAAGAGGGGAGGGAACACGACGGTGAGCAGCCACTCGGAGTGGCTCCTGACCGTGCCGGCGATGCCCGACGTGATCAACGTCAAGCTCGTCCCCATCACCTCCCTCATCAGGGGCGTGCCTGGCACTGGCTTCCTCTCTCACGCCATCAACCTCTACCTCAGATATAAGCCTCCTGTCGCTGACCTGAGGTACTTCCTGGATTTCCAGCATCACTGCGTGTGGGCCCCGGTGCTCGGCGAGCTGCCTCTGGGCCCTTGCTCACACCGGCAAGGCTCCAGCCCGGCGCTGCATTTCAGCCTGCTGGGCTCCAAGCTCTATGTCAGCTCAACTGAGGTGGTTGTTCCGAAGCTGCCGGTTACTGGCATGAGGCTGCATCTAGAGGGCAAGAAAAACAACCGGCTGGGCATCCACCTGCAGCACCTGTCGACGACGCCGACGTTCGTCGCCGCCGCCAGGGCCGACAAGCCGCCGGTGTGGCGTGGCACGGAGGCGGTCACCGACGACCGGTACTACGAGCCGGTGCAGTGGCGGA-TGCTGGCGCGCGTCTGCACCGCGCCGGTGAAGTACGACCCGCGGTGGTGCG-CCGGCGACCGCCGCCGCCGCCCCGCCGCCTGCGTCGTCGCCGGCGCGCAGCTCCACGTCGTGGCGCACGACGCCGCCAACAACGTGCTCCACCTCAGGCTGCTCTACTCCCAGCTCCCCGGCTACGCCGTCGTGCAGTCCAAGT-G-GGCGCGCGGCGCGGCGCGGCCGCCGTCGGGGAGGTCGTCGAGTTTCCTGTCCATACCCTTCTCGGGGTCGCCGTCGACATCCAGTGGCGCCGCCGAGAAGGGAGGCCGGCCGGAGCAGGGCGCCTCGCTGGTGGGCGTCGCCAACGTCAACTCC] [+] EMBL AK099700 [GGACATGAAGCTGCAATGGCAGCATGTCTGGTCGTAGTCAACTAGCCAGCCACCAAAGAGAGAGCTATCATCCATGGCCGCCGTGGCGGCGGCCGA G AAGGCGGTGAGGTGCCTCGGCCGCGGCTTCGACA TGGCCGGCGACCTGAGGCTCAAGTACTGCAAGGGCGGCGGCGCCGGCTGCCTGGTCGCGAGGCGCGGCGAGACGACGCCGCTCACCGTG CCGGGAGTCGGGGTGATCGCCGACGTG CCGG CCGACGTGAGG TGCGACAAGGG CGACCGCG TCCGG TTC AAGTCCGACGTGC TCGAGTTCAAC AAGATGTCGGAGC TG TTCAACCAGA GGAG TTCGG T GGAAGGGAAGATCCCGTCGGGGCAGTTCAACGCGTCATTCGACCTGGACAGCGGGTCGTGGGCCCACGACGCGCCGCACACCAGGTGCCTCGCTATGGACGGGTACTTCATCTCCCTCTTTGACCTCCGTCTCGACCACCGCCACCTCGCCCTCGATGCAGGTGTCCTCGCCGACGTGCCACCCGCCTGGGACCCCTCTGCCATCGCAAGATTCATCGAGAAGTATGGGACGCATGTGATCGTGGGGCTGAGCATGGGCGGCCAGGACGTCGTCTACGTGAAGCAGGATAAGTCGTCTTCTCTGTCGCCGTCGGAGATCAAGGAGCATCTTGACAGGCTCGGCGATCAGCTCTTCACCGGGACATGCGCCATGCCACCTCTGCACTGCAGGTCCAAGGACAAGTTCAAGATACCGGAGGCCTTCAACGTGTTCGATGCACAAGTAGCTCAGCAGAGGCTTCACGGGATCACCACTCTTGTATCAAGCAAGGAGGGTGTGACGGTGATATACTCCAAGAGGGGAGGGAACACGACGGTGAGCAGCCACTCGGAGTGGCTCCTGACCGTGCCGGCGATGCCCGACGTGATCAACGTCAAGCTCGTCCCCATCACCTCCCTCATCAGGGGCGTGCCTGGCACTGGCTTCCTCTCTCACGCCATCAACCTCTACCTCAGATATAAGCCTCCTGTCGCTGACCTGAGGTACTTCCTGGATTTCCAGCATCACTGCGTGTGGGCCCCGGTGCTCGGCGAGCTGCCTCTGGGCCCTTGCTCACACCGGCAAGGCTCCAGCCCGGCGCTGCATTTCAGCCTGCTGGGCTCCAAGCTCTATGTCAGCTCAACTGAGGTGGTTGTTCCGAAGCTGCCGGTTACTGGCATGAGGCTGCATCTAGAGGGCAAGAAAAACAACCGGCTGGGCATCCACCTGCAGCACCTGTCGACGACGCCGACGTTCGTCGCCGCCGCCAGGGCCGACAAGCCGCCGGTGTGGCGTGGCACGGAGGCGGTCACCGACGACCGGTACTACGAGCCGGTGCAGTGGCGGA TGCTGGCGCGCGTCTGCACCGCGCCGGTGAAGTACGACCCGCGGTGGTGCG CCGGCGACCGCCGCCGCCGCCCCGCCGCCTGCGTCGTCGCCGGCGCGCAGCTCCACGTCGTGGCGCACGACGCCGCCAACAACGTGCTCCACCTCAGGCTGCTCTACTCCCAGCTCCCCGGCTACGCCGTCGTGCAGTCCAAGT G GGCGCGCGGCGCGGCGCGGCCGCCGTCGGGGAGGTCGTCGAGTTTCCTGTCCATACCCTTCTCGGGGTCGCCGTCGACATCCAGTGGCGCCGCCGAGAAGGGAGGCCGGCCGGAGCAGGGCGCCTCGCTGGTGGGCGTCGCCAACGTCAACTCC] [+] EMBL AU064249 [ GCAGCATGTCTGGTCGTAGTCAACTAGCCAGCCACCAAAGAGAGAGCTATCATCCATGGCCGCCGTGGC GCGGCCGAGG AAGGCGGTGAGGTGCCTCGGCCGCGGCTTCGACA TGGCCGGCGACCTGAGGCTCAAGTACTGCAAGGGCGGCGGCG CGGCTGCCTGGTCGAGAGGCGCGGCGAGACGACGCCGCTCACCGTGCCCGGGAGTCGGGGTAATCGCCGACGTGCCCGGCCCGACGTGAGGTTCCGACAAGGGCCGACCGCGTTCCGGTTTCAAAGTCCGACGTGCTTCGAGTTCAACAAAGATGTCGGAGCTTGTTTAAACCAGAGGGAGTTTTCGG TTGGGAAGGGga ] [+] EMBL AU064278 [ GCAGCATGTCTGGTCGTAGTCAACTAGCCAGCCACCAAAGAGAGAGCTATCATCCATGGCCGCCGTGGC GCGGCGNATGTAAGGCGGTGAGGTGCCTCGGCCGCGGCTTCGACATTGGCCGGCGACCTGAGGCTCAAGTACTGCAAGGGCGGCGGCG CGGCTGCCTGGTCGAGAGGCGCGGCGAGACGACGNCGCTCACCGTG CCGGGAGTCGGGGTGATCGCCGACGTG CCGG CCGACGTGAGG TGCGACAAGGG CGACCGCG TCCGG TTC AAGTCCGACGTGCTTCGAGTTCAAC AAGATGTCGGAGCTTT TTCAACCAGA GGAG TTCGGTT GGAAGGGAAGATCCCGTCGGGGCANTTCAACGCGTCATTCGACCTGGACAACGGGTCGTTGG CCACGAGGCGCCG AAAACAAGTNCCTTG TATTGAC ] [+] EMBL CB673016 [ ACAAGTAGCTCTTCAGAGGCTTCACGGGATCACCACTCTTGTATCAAGCAAGGAGGGTGTGACGGTGATATACTCCAAGAGGGGAGGGAACACGACGGTGAGCAGCCACTCGGAGTGGCTCCTGACCGTGCCGGCGATGCCCGACGTGATCAACGTCAAGCTCGTCCCCATCACCTCCCTCATCAGGGGCGTGCCTGGCACTGGCTTCCTCTCTCACGCCATCAACCTCTACCTCAGATATAAGCCTCCTGTCGCTGACCTGAGGTACTTCCTGGATTTCCAGCATCACTGCGTGTGGGCCCCGGTGCTCGGCGAGCTGCCTCTGGGCCCTTGCTCACACCGGCAAGGCTCCAGCCCGGCGCTGCATTTCAGCCTGCTGGGCTCCAAGCTCTATGTCAGCTCAACTGAGGTGGTTGTTCCGAAGCTGCCGGTTACTGGCATGAGGCTGCATCTAGAGGGCAAGAAAAACAACCGGCTGGGCATCCACCTGCAGCACCTGTCGACGACGCCGACGTTCGTCGCCGCCGCCAGGGCCGACAAGCCGCCGGTGTGGCGTGGCACGGAGGCGGTCACCGACGACCGGTACTACGAGCCGGTGCAGTGGCGGA TGCTGGCGCGCGTCTGCACCGCGCCGGTGAAGTACGACCCGCGGTGGTGCG CCGGCGACCGCCGCCGCCGCCCCGCCGCCTGCGTCGTCGCCGGCGCGCAGCTCCACGTCGTGGCGCACGACGCCGCCAACAACGTGCTCCACCTCAAGC ] [+] EMBL AU161880 [ GTGTGGGCCCCGGTGCTCGGCGAGCTGCCTCTGGGCCCTTGCTCACACCGGCAAGGCTCCAGCCCGGCGCTGCATTTCAGCCTGCTGGGCTCCAAGCTCTATGTCAGCTCAACTGAGGTGGTTGTTCCGAAGCTGCCGGTTACTGGCATGAGGCTGCATCTAGAGGGCAAGAAAAACAACCGGCTGGGCATCCACCTGCAGCACCTGTCGACGACGCCGACGTTCGTCGCCGCCGCCAGGGCCGACAAGCCGCCGGTGTGGCGTGGCACGGANGCGGTCACCGACGACCGGTACTACGAGCCGGTGCAGTGGCGGA TGCTGGCGCGCGTCTGCACCGCGCCGGTGAAGTACGACCCGCGGTNGTGCG CCGGCGANCGCCGCCGCCGCCCCGC ] [+] EMBL AU094676 [ AACCGGCTGGGCATCCACCTGCAGCACCTGTCGACGACGCCGACGTTCGTCGCCGCCGCCAGGGCCGACAAGCCGCCGNTGTGGCGTGGCACGGAGGCGGTCACCGACGACCGGTACTACGAGCCGGTGCAGTGGCGGATTGCTGGCGCGCGTCTGCACCGCGCCGGTGAAGTACGACCCGCGGTGGTGCG CCGGCGACCGCCGCCGCCGCCCCGCCGCCTGCGTCGTCGCCGGCGCGCAGCTCCACGTCGTGGCGCACGACGCCGCCAACAACGTGCTCCACCTCAGGCTGCTCTA ] [+] EMBL AU161881 [ GGCCGACAAGCCGCCGGTGTGGCGTGGCACGGAGGCGGTCACCGACGACCGGTACTACGAGCCGGTGCAGTGGCGGA TGCTGGCGCGCGTCTGCACCGCGCCGGTGAAGTACGACCCGCGGTGGTGCGTCCGGCGACCGCCGCCGCCGCCCCGCCGCCTGCGTCGTCGCCGGCGCGCAGCTCCACGTCGTGGCGCACGACGCCGCCAACAACGTGCTCCACCTCAGGCTGCTCTACTCCCAGCTACTC CNTACGCCGTCGTGCAGTCCAAGTAGAGGCGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||