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Oryza sativa
cluster # 10482 cluster # 10482       Sequences # 7       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10482#0 length = 2520 sequences # 4  
 consensus_10482#1 length = 785 sequences # 1  
consensus_10482#2 length = 208 sequences # 2  
consensusID : consensus_10482#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2520
fasta sequence 
                              [TCTTTCTCTCTCATTCCACTTCTTGCTCGCCGCCGCCGCCGCCGCCGCCGCCGGCGAAGGGGATCGATCGGATGGGGACGTCGGTGCAGGTGACTCCGTTGAGTGGCGCGTACGGTGAGGGACCCCTCTGCTACCTGCTCGCCGTCGATGGCTTCCGCTTCCTCCTCGACTGCGGCTGGACCGACCTCTGCGACCCCTCCCACCTCCAACCCCTCGCCAAGGTTGCACCAACAATAGATGCAGTTCTTTTGTCTCATGCCGATACCATGCATCTAGGAGCTTTGCCATATGCTATGAAACATCTCGGACTATCTGCACCAGTATATGCCACAGAACCTGTATTTAGACTTGGCATTTTAACCTTGTATGATTACTTTATATCACGACGGCAAGTTTCAGATTTTGACTTGTTTACTTTGGACGATATTGATGCTGCATTCCAAAATGTTGTTAGATTGAAGTACTCACAGAACCACCTTTTGAATGATAAAGGTGAAGGAATAGTTATTGCTCCACATGTTGCTGGGCATGATTTGGGTGGCACGGTATGGAAGATAACAAAAGATGGGGAGGATGTTGTTTATGCTGTTGACTTCAACCATCGTAAAGAGAGGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTCTGATAACTGATGCATACAATGCCTTGAACAACCATGTCTACAAAAGGCAGCAGGATCAAGATTTCATTGATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGATTGATACAGCTGGTAGAGTTCTTGGAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACGGCATTTGATCTACCCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGTCAAGAGTTTTCTTGAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGACAATGCCTTCCTATTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAGCTGGGAGATGCACCAAAGGTGGTTCTAGCATCCATGGCAAGCTTGGAGGTTGGCTTTTCTCATGACATATTTGTTGATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAAGGGACAGTTTGGGACACTAGCTCGCATGCTCCAAGTAGATCCACCTCCAAAAGCTGTAAAGGTCACTATGAGCAAGCGAATTCCTTTAGTTGGTGATGAGCTGAAAGCTTACGAAGAAGAACAAGAACGGATAAAAAAGGAGGAAGCGCTAAAGGCCAGTCTAAACAAAGAGGAGGAAAAGAAGGCGTCTCTTGGATCAAACGCAAAGGCTTCTGATCCCATGGTTATTGATGCCAGCACATCTCGCAAACCATCCAACGCTGGTTCAAAGTTTGGCGGGAATGTGGATATTCTCATTGATGGATATGTCCCTCCATCATCAAGTGTTGCTCCAATGTTTCCTTTCTTTGAAAATACTTCTGAATGGGATGACTTCGGTGAGGTTATCAACCCTGAAGACTATCTGATGAAGCAAGAAGAAATGGATAATACTTTGATGCCCGGTGCTGGGGATGGTATGGATAGTATGCTTGATGAGGGCTCAGCACGCCTACTCCTTGATTCTACACCCTCAAAAGTTATTTCCAACGAGATGACTGTGCAAGTCAAGTGTTCATTAGCATATATGGACTTTGAAGGTCGGTCTGATGGGCGCTCTGTAAAATCTGTTATTGCTCATGTGGCCCCATTAAAACTTGTTTTGGTTCATGGATCAGCAGAAGCTACTGAGCATTTAAAAATGCATTGTTCGAAGAACTCAGACTTGCATGTTTATGCTCCTCAGATAGAAGAAACTATTGATGTGACATCAGATTTATGTGCTTACAAGGTACAACTTTCGGAGAAGTTAATGAGTAATGTTATTTCTAAGAAGTTGGGTGAGCATGAAATTGCATGGGTAGATGCAGAGGTTGGAAAAACAGATGACAAGCTTACTTTGTTGCCCCCGTCGTCAACTCCAGCAGCCCACAAGTCAGTTCTTGTGGGTGATTTGAAATTGGCTGATTTTAAGCAATTCCTGGCAAATAAAGGTTTGCAGGTTGAATTTGCTGGTGGTGCTTTACGGTGTGGTGAATACATCACACTGCGCAAGATTGGTGATGCTGGCCAAAAGGGCAGCACAGGTTCCCAGCAGATTGTGATCGAAGGGCCCCTGTGTGAGGACTATTACAAGATTCGTGAGCTTCTTTACTCTCAGTTCTACTTGTTGTAAAATGTAATGGACCGGACCATGGCATCTCTTTCCTTTCGTGTTGATGTTGTTGTACACGGAGGAACCGTTAATCCATTTGGATCTGAGCGCCAGAATATGCTGTTTGTTGCTCTCCCGAGATCCCTTTTTAGTTTTAGTTAGCTTATTTTAGAGAGTAGTAGACCCAAGAGGTGTGTTGATGAGACAATTTCAATATATATGCTTTTTGTAAAAAAAAAAAAAAAAAAAAAGG]

[+] EMBL AK070608             [TCTTTCTCTCTCATTCCACTTCTTGCTCGCCGCCGCCGCCGCCGCCGCCGCCGGCGAAGGGGATCGATCGGATGGGGACGTCGGTGCAGGTGACTCCGTTGAGTGGCGCGTACGGTGAGGGACCCCTCTGCTACCTGCTCGCCGTCGATGGCTTCCGCTTCCTCCTCGACTGCGGCTGGACCGACCTCTGCGACCCCTCCCACCTCCAACCCCTCGCCAAGGTTGCACCAACAATAGATGCAGTTCTTTTGTCTCATGCCGATACCATGCATCTAGGAGCTTTGCCATATGCTATGAAACATCTCGGACTATCTGCACCAGTATATGCCACAGAACCTGTATTTAGACTTGGCATTTTAACCTTGTATGATTACTTTATATCACGACGGCAAGTTTCAGATTTTGACTTGTTTACTTTGGACGATATTGATGCTGCATTCCAAAATGTTGTTAGATTGAAGTACTCACAGAACCACCTTTTGAATGATAAAGGTGAAGGAATAGTTATTGCTCCACATGTTGCTGGGCATGATTTGGGTGGCACGGTATGGAAGATAACAAAAGATGGGGAGGATGTTGTTTATGCTGTTGACTTCAACCATCGTAAAGAGAGGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTCTGATAACTGATGCATACAATGCCTTGAACAACCATGTCTACAAAAGGCAGCAGGATCAAGATTTCATTGATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGATTGATACAGCTGGTAGAGTTCTTGGAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACGGCATTTGATCTACCCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGTCAAGAGTTTTCTTGAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGACAATGCCTTCCTATTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAGCTGGGAGATGCACCAAAGGTGGTTCTAGCATCCATGGCAAGCTTGGAGGTTGGCTTTTCTCATGACATATTTGTTGATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAAGGGACAGTTTGGGACACTAGCTCGCATGCTCCAAGTAGATCCACCTCCAAAAGCTGTAAAGGTCACTATGAGCAAGCGAATTCCTTTAGTTGGTGATGAGCTGAAAGCTTACGAAGAAGAACAAGAACGGATAAAAAAGGAGGAAGCGCTAAAGGCCAGTCTAAACAAAGAGGAGGAAAAGAAGGCGTCTCTTGGATCAAACGCAAAGGCTTCTGATCCCATGGTTATTGATGCCAGCACATCTCGCAAACCATCCAACGCTGGTTCAAAGTTTGGCGGGAATGTGGATATTCTCATTGATGGATATGTCCCTCCATCATCAAGTGTTGCTCCAATGTTTCCTTTCTTTGAAAATACTTCTGAATGGGATGACTTCGGTGAGGTTATCAACCCTGAAGACTATCTGATGAAGCAAGAAGAAATGGATAATACTTTGATGCCCGGTGCTGGGGATGGTATGGATAGTATGCTTGATGAGGGCTCAGCACGCCTACTCCTTGATTCTACACCCTCAAAAGTTATTTCCAACGAGATGACTGTGCAAGTCAAGTGTTCATTAGCATATATGGACTTTGAAGGTCGGTCTGATGGGCGCTCTGTAAAATCTGTTATTGCTCATGTGGCCCCATTAAAACTTGTTTTGGTTCATGGATCAGCAGAAGCTACTGAGCATTTAAAAATGCATTGTTCGAAGAACTCAGACTTGCATGTTTATGCTCCTCAGATAGAAGAAACTATTGATGTGACATCAGATTTATGTGCTTACAAGGTACAACTTTCGGAGAAGTTAATGAGTAATGTTATTTCTAAGAAGTTGGGTGAGCATGAAATTGCATGGGTAGATGCAGAGGTTGGAAAAACAGATGACAAGCTTACTTTGTTGCCCCCGTCGTCAACTCCAGCAGCCCACAAGTCAGTTCTTGTGGGTGATTTGAAATTGGCTGATTTTAAGCAATTCCTGGCAAATAAAGGTTTGCAGGTTGAATTTGCTGGTGGTGCTTTACGGTGTGGTGAATACATCACACTGCGCAAGATTGGTGATGCTGGCCAAAAGGGCAGCACAGGTTCCCAGCAGATTGTGATCGAAGGGCCCCTGTGTGAGGACTATTACAAGATTCGTGAGCTTCTTTACTCTCAGTTCTACTTGTTGTAAAATGTAATGGACCGGACCATGGCATCTCTTTCCTTTCGTGTTGATGTTGTTGTACACGGAGGAACCGTTAATCCATTTGGATCTGAGCGCCAGAATATGCTGT                                                                                                                                 ]
[+] EMBL AK063384             [     CTCTCTCATTCCACTTCTTGCTCGCCGCCGCCGCCGCCGCCGCCGCCGGCGAAGGGGATCGATCGGATGGGGACGTCGGTGCAGGTGACTCCGTTGAGTGGCGCGTACGGTGAGGGACCCCTCTGCTACCTGCTCGCCGTCGATGGCTTCCGCTTCCTCCTCGACTGCGGCTGGACCGACCTCTGCGACCCCTCCCACCTCCAACCCCTCGCCAAGGTTGCACCAACAATAGATGCAGTTCTTTTGTCTCATGCCGATACCATGCATCTAGGAGCTTTGCCATATGCTATGAAACATCTCGGACTATCTGCACCAGTATATGCCACAGAACCTGTATTTAGACTTGGCATTTTAACCTTGTATGATTACTTTATATCACGACGGCAAGTTTCAGATTTTGACTTGTTTACTTTGGACGATATTGATGCTGCATTCCAAAATGTTGTTAGATTGAAGTACTCACAGAACCACCTTTTGAATGATAAAGGTGAAGGAATAGTTATTGCTCCACATGTTGCTGGGCATGATTTGGGTGGCACGGTATGGAAGATAACAAAAGATGGGGAGGATGTTGTTTATGCTGTTGACTTCAACCATCGTAAAGAGAGGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTCTGATAACTGATGCATACAATGCCTTGAACAACCATGTCTACAAAAGGCAGCAGGATCAAGATTTCATTGATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGATTGATACAGCTGGTAGAGTTCTTGAAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACGGCATTTGATCTACCCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGTCAAGAGTTTTCTTGAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGACAATGCCTTCCTATTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAGCTGGGAGATGCACCAAAGGTGGTTCTAGCATCCATGGCAAGCTTGGAGGTTGGCTTTTCTCATGACATATTTGTTGATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAAGGGACAGTTTGGGACACTAGCTCGCATGCTCCAAGTAGATCCACCTCCAAAAGCTGTAAAGGTCACTATGAGCAAGCGAATTCCTTTAGTTGGTGATGAGCTGAAAGCTTACGAAGAAGAACAAGAACGGATAAAAAAGGAGGAAGCGCTAAAGGCCAGTCTAAACAAAGAGGAGGAAAAGAAGGCGTCTCTTGGATCAAACGCAAAGGCTTCTGATCCCATGGTTATTGATGCCAGCACATCTCGCAAACCATCCAACGCTGGTTCAAAGTTTGGCGGGAATATGGATATTCTCATTGATGGATTTGTCCCTCCATCATCAAGTGTTGCTCCAATGTTTCCTTTCTTTGAAAATACTTCTGAATGGGATGACTTCGGTGAGGTTATCAACCCTGAAGACTATCTGATGAAGCAAGAAGAAATGGATAATACTTTGATGCCCGGTGCTGGGGATGGTATGGATAGTATGCTTGATGAGGGCTCAGCACGCCTACTCCTTGATTCTACACCCTCAAAAGTTATTTCCAACGAGATGACTGTGCAAGTCAAGTGTTCATTAGCATATATGGACTTTGAAGGTCGGTCTGATGGGCGCTCTGTAAAATCTGTTATTGCTCATGTGGCCCCATTAAAACTTGTTTTGGTTCATGGATCAGCAGAAGCTACTGAGCATTTAAAAATGCATTGTTCGAAGAACTCAGACTTGCATGTTTATGCTCCTCAGATAGAAGAAACTATTGATGTGACATCAGATTTATGTGCTTACAAGGTACAACTTTCGGAGAAGTTAATGAGTAATGTTATTTCTAAGAAGTTGGGTGAGCATGAAATTGCATGGGTAGATGCAGAGGTTGGAAAAACAGATGACAAGCTTACTTTGTTGCCCCCGTCGTCAACTCCAGCAGCCCACAAGTCAGTTCTTGTGGGTGATTTGAAATTGGCTGATTTTAAGCAATTCCTGGCAAATAAAGGTTTGCAGGTTGAATTTGCTGGTGGTGCTTTACGGTGTGGTGAATACATCACACTGCGCAAGATTGGTGATGCTGGCCAAAAGGGCAGCACAGGTTCCCAGCAGATTGTGATCGAAGGGCCCCTGTGTGAGGACTATTACAAGATTCGTGAGCTTCTTTACTCTCAGTTCTACTTGTTGTAAAATGTAATGGACCGGACCATGGCATCTCTTTCCTTTCGTGTTGATGTTGTTGTACACGGAGGAACCGTTAATCCATTTGGATCTGAGCGCCAGAATATGCTGTTTGTTGCTCTCCCGAGATCCCTTTTTAGTTTTAGTTAGCTTATTTTAGAGAGTAGTAGACCCAAGAGGTGTGTTGATGAGACAATTTCAATATATA                                 ]
[+] EMBL CB661392             [                                 CGCCGCCGCCGCCGCCGCCGGCGAAGGGGATCGATCGGATGGGGACGTCGGTGCAGGTGACTCCGTTGAGTGGCGCGTACGGTGAGGGACCCCTCTGCTACCTGCTCGCCGTCGATGGCTTCCGCTTCCTCCTCGACTGCGGCTGGACCGACCTCTGCGACCCCTCCCACCTCCAACCCCTCGCCAAGGTTGCACCAACAATAGATGCAGTTCTTTTGTCTCATGCCGATACCATGCATCTAGGAGCTTTGCCATATGCTATGAAACATCTCGGACTATCTGCACCAGTATATGCCACAGAACCTGTATTTAGACTTGGCATTTTAACCTTGTATGATTACTTTATATCACGACGGCAAGTTTCAGATTTTGACTTGTTTACTTTGGACGATATTGATGCTGCATTCCAAAATGTTGTTAGATTGAAGTACTCACAGAACCACCTTTTGAATGATAAAGGTGAAGGAATAGTTATTGCTCCACATGTTGCTGGGCATGATTTGGGTGGCACGGTATGGAAGATAACAAAAGATGGGGAGGATGTTGTTTATGCTGTTGACTTCAACCATCGTAAAGAGAGGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTCTGATAACTGATGCATACAATGCCTTGAACAACCATGTCTACAAAAGGCAGCAGGATCAAGATTTCATTGATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGATTGATACAGCTGGTAGAGTTCTTNGAATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB668841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTAAAATCTGTTATTGCTCATGTGGCCCCATTAAAACTTGTTTTGGTTCATGGATCAGCAGAAGCTACTGAGCATTTAAAAATGCATTGTTCGAAGAACTCAGACTTGCATGTTTATGCTCCTCAGATAGAAGAAACTATTGATGTGACATCAGATTTATGTGCTTACAAGGTACAACTTTCGGAGAAGTTAATGAGTAATGTTATTTCTAAGAAGTTGGGTGAGCATGAAATTGCATGGGTAGATGCAGAGGTTGGAAAAACAGATGACAAGCTTACTTTGTTGCCCCCGTCGTCAACTCCAGCAGCCCACAAGTCAGTTTTTGTGGGTGATTTGAAATTGGCTGATTTTAAGCAATTCCTGGCAAATAAAGGTTTGCAGGTTGAATTTGCTGGTGGTGCTTTACGGTGTGGTGAATACATCACACTGCGCAAGATTGGTGATGCTGGCCAAAAGGGCAGCACAGGTTCCCAGCAGATTGTGATCGAAGGGCCCCTGTGTGAGGACTATTACAAGATTCGTGAGCTTCTTTACTCTCAGTTCTACTTGTTGTAAAATGTAATGGACCGGACCATGGCATCTCTTTCCTTTCGTGTTGATGTTGTTGTACACGGAGGAACCGTTAATCCATTTGGATTTGAGCGCCAGAATATGCTGTTTGTTGCTCTCCCGAGATCCCTTTTTAGTTTTAGTTAGCTTATTTTAGAGAGTAGTAGACCCAAGAGGTGTGTTGATGAGACAAAGGCAATATATATGCTTTTTGTAAAAAAAAAAAAAAAAAAAAAGG]




>consensus_10482#0
TCTTTCTCTCTCATTCCACTTCTTGCTCGCCGCCGCCGCCGCCGCCGCCGCCGGCGAAGG
GGATCGATCGGATGGGGACGTCGGTGCAGGTGACTCCGTTGAGTGGCGCGTACGGTGAGG
GACCCCTCTGCTACCTGCTCGCCGTCGATGGCTTCCGCTTCCTCCTCGACTGCGGCTGGA
CCGACCTCTGCGACCCCTCCCACCTCCAACCCCTCGCCAAGGTTGCACCAACAATAGATG
CAGTTCTTTTGTCTCATGCCGATACCATGCATCTAGGAGCTTTGCCATATGCTATGAAAC
ATCTCGGACTATCTGCACCAGTATATGCCACAGAACCTGTATTTAGACTTGGCATTTTAA
CCTTGTATGATTACTTTATATCACGACGGCAAGTTTCAGATTTTGACTTGTTTACTTTGG
ACGATATTGATGCTGCATTCCAAAATGTTGTTAGATTGAAGTACTCACAGAACCACCTTT
TGAATGATAAAGGTGAAGGAATAGTTATTGCTCCACATGTTGCTGGGCATGATTTGGGTG
GCACGGTATGGAAGATAACAAAAGATGGGGAGGATGTTGTTTATGCTGTTGACTTCAACC
ATCGTAAAGAGAGGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTC
TGATAACTGATGCATACAATGCCTTGAACAACCATGTCTACAAAAGGCAGCAGGATCAAG
ATTTCATTGATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGATTG
ATACAGCTGGTAGAGTTCTTGGAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACGGC
ATTTGATCTACCCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGTCA
AGAGTTTTCTTGAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGACA
ATGCCTTCCTATTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAGCTGG
GAGATGCACCAAAGGTGGTTCTAGCATCCATGGCAAGCTTGGAGGTTGGCTTTTCTCATG
ACATATTTGTTGATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAAGGGAC
AGTTTGGGACACTAGCTCGCATGCTCCAAGTAGATCCACCTCCAAAAGCTGTAAAGGTCA
CTATGAGCAAGCGAATTCCTTTAGTTGGTGATGAGCTGAAAGCTTACGAAGAAGAACAAG
AACGGATAAAAAAGGAGGAAGCGCTAAAGGCCAGTCTAAACAAAGAGGAGGAAAAGAAGG
CGTCTCTTGGATCAAACGCAAAGGCTTCTGATCCCATGGTTATTGATGCCAGCACATCTC
GCAAACCATCCAACGCTGGTTCAAAGTTTGGCGGGAATGTGGATATTCTCATTGATGGAT
ATGTCCCTCCATCATCAAGTGTTGCTCCAATGTTTCCTTTCTTTGAAAATACTTCTGAAT
GGGATGACTTCGGTGAGGTTATCAACCCTGAAGACTATCTGATGAAGCAAGAAGAAATGG
ATAATACTTTGATGCCCGGTGCTGGGGATGGTATGGATAGTATGCTTGATGAGGGCTCAG
CACGCCTACTCCTTGATTCTACACCCTCAAAAGTTATTTCCAACGAGATGACTGTGCAAG
TCAAGTGTTCATTAGCATATATGGACTTTGAAGGTCGGTCTGATGGGCGCTCTGTAAAAT
CTGTTATTGCTCATGTGGCCCCATTAAAACTTGTTTTGGTTCATGGATCAGCAGAAGCTA
CTGAGCATTTAAAAATGCATTGTTCGAAGAACTCAGACTTGCATGTTTATGCTCCTCAGA
TAGAAGAAACTATTGATGTGACATCAGATTTATGTGCTTACAAGGTACAACTTTCGGAGA
AGTTAATGAGTAATGTTATTTCTAAGAAGTTGGGTGAGCATGAAATTGCATGGGTAGATG
CAGAGGTTGGAAAAACAGATGACAAGCTTACTTTGTTGCCCCCGTCGTCAACTCCAGCAG
CCCACAAGTCAGTTCTTGTGGGTGATTTGAAATTGGCTGATTTTAAGCAATTCCTGGCAA
ATAAAGGTTTGCAGGTTGAATTTGCTGGTGGTGCTTTACGGTGTGGTGAATACATCACAC
TGCGCAAGATTGGTGATGCTGGCCAAAAGGGCAGCACAGGTTCCCAGCAGATTGTGATCG
AAGGGCCCCTGTGTGAGGACTATTACAAGATTCGTGAGCTTCTTTACTCTCAGTTCTACT
TGTTGTAAAATGTAATGGACCGGACCATGGCATCTCTTTCCTTTCGTGTTGATGTTGTTG
TACACGGAGGAACCGTTAATCCATTTGGATCTGAGCGCCAGAATATGCTGTTTGTTGCTC
TCCCGAGATCCCTTTTTAGTTTTAGTTAGCTTATTTTAGAGAGTAGTAGACCCAAGAGGT
GTGTTGATGAGACAATTTCAATATATATGCTTTTTGTAAAAAAAAAAAAAAAAAAAAAGG

consensusID : consensus_10482#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 785
fasta sequence 
                              [AATGCTTTCAGCTCTAGCATTACTACTATACCCACACAGCCATGGTTGCAGATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGATTGATACAGCTGGTAGAGTTCTTGAAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACGGCATTTGATCTACCCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGTCAAGAGTTTTCTTGAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGACAATGCCTTCCTATTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAGCTGGGAGATGCACCAAAGGTGGTTCTAGCATCCATGGCAAGCTTGGAGGTTGGCTTTTCTCATGACATATTTGTTGATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAAGGGACAGCTATCTAATTACAAAGTATCCCATTCCAGTTTGGGACACTAGCTCGCATGCTCCAAGTAGATCCACCTCCAAAAGCTGTAAAGGTCACTATGAGCAAGCGAATTCCTTTAGTTGGTGATGAGCTGAAAGCTTACGAAGAAGAACAAGAACGGATAAAAAAGGAGGAAGCGCTAAAGGCCAGTCTAAACAAAGAGGAGGAAAAGAAGGCGTCTCTTGGATCAAACGCAAAGGCTTCTGATCCCATGGTTATTGATGCCAGCACATCTCGCAAACCATCCAACGCTGGTTCCAAGTTTGGCGGGAATGTGGATATTCTCATTG]

[+] EMBL CB668840             [AATGCTTTCAGCTCTAGCATTACTACTATACCCACACAGCCATGGTTGCAGATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGATTGATACAGCTGGTAGAGTTCTTGAAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACGGCATTTGATCTACCCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGTCAAGAGTTTTCTTGAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGACAATGCCTTCCTATTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAGCTGGGAGATGCACCAAAGGTGGTTCTAGCATCCATGGCAAGCTTGGAGGTTGGCTTTTCTCATGACATATTTGTTGATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAAGGGACAGCTATCTAATTACAAAGTATCCCATTCCAGTTTGGGACACTAGCTCGCATGCTCCAAGTAGATCCACCTCCAAAAGCTGTAAAGGTCACTATGAGCAAGCGAATTCCTTTAGTTGGTGATGAGCTGAAAGCTTACGAAGAAGAACAAGAACGGATAAAAAAGGAGGAAGCGCTAAAGGCCAGTCTAAACAAAGAGGAGGAAAAGAAGGCGTCTCTTGGATCAAACGCAAAGGCTTCTGATCCCATGGTTATTGATGCCAGCACATCTCGCAAACCATCCAACGCTGGTTCCAAGTTTGGCGGGAATGTGGATATTCTCATTG]




>consensus_10482#1
AATGCTTTCAGCTCTAGCATTACTACTATACCCACACAGCCATGGTTGCAGATGCATTAG
TGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGATTGATACAGCTGGTAGAGTTC
TTGAAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACGGCATTTGATCTACCCTATCT
ACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGTCAAGAGTTTTCTTGAATGGA
TGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGACAATGCCTTCCTATTAAAAT
GTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAGCTGGGAGATGCACCAAAGGTGG
TTCTAGCATCCATGGCAAGCTTGGAGGTTGGCTTTTCTCATGACATATTTGTTGATATGG
CAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAAGGGACAGCTATCTAATTACAAAG
TATCCCATTCCAGTTTGGGACACTAGCTCGCATGCTCCAAGTAGATCCACCTCCAAAAGC
TGTAAAGGTCACTATGAGCAAGCGAATTCCTTTAGTTGGTGATGAGCTGAAAGCTTACGA
AGAAGAACAAGAACGGATAAAAAAGGAGGAAGCGCTAAAGGCCAGTCTAAACAAAGAGGA
GGAAAAGAAGGCGTCTCTTGGATCAAACGCAAAGGCTTCTGATCCCATGGTTATTGATGC
CAGCACATCTCGCAAACCATCCAACGCTGGTTCCAAGTTTGGCGGGAATGTGGATATTCT
CATTG

consensusID : consensus_10482#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 208
fasta sequence 
                              [TCCCCTTGGATGTGAGCGCCAGAATATGCTGTTTGTTGCTCTCCCGAGATCCCTTTTTAGTTTTAGTTAGCTTATTCTAGAGAGTAGTAGACCCAAGAGGTGTGTTGATGAGACAATTTCAATATATATGCTTTTTGTATATTATTGTACACTTGATAATGGTTCATTCCTGAATCCTGATGTTGAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB685412             [TCCCCTTGGATGTGAGCGCCAGAATATGCTGTTTGTTGCTCTCCCGAGATCCCTTTTTAGTTTTAGTTAGCTTATTCTAGAGAGTAGTAGACCCAAGAGGTGTGTTGATGAGACAATTTCAATATATATGCTTTTTGTATATTATTGTACACTTGATAATGG                                              ]
[+] EMBL CA765479             [                                                                                                            TGAGACAATTTCAATATATATGCTTTTTGTATATTATTGTACACTTGATAATGGTTCATTCCTGAATCCTGATGTTGAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10482#2
TCCCCTTGGATGTGAGCGCCAGAATATGCTGTTTGTTGCTCTCCCGAGATCCCTTTTTAG
TTTTAGTTAGCTTATTCTAGAGAGTAGTAGACCCAAGAGGTGTGTTGATGAGACAATTTC
AATATATATGCTTTTTGTATATTATTGTACACTTGATAATGGTTCATTCCTGAATCCTGA
TGTTGAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10482#0      TCTTTCTCTCTCATTCCACTTCTTGCTCGCCGCCGCCGCCGCCGCCGCCGCCGGCGAAGG 60
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      GGATCGATCGGATGGGGACGTCGGTGCAGGTGACTCCGTTGAGTGGCGCGTACGGTGAGG 120
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      GACCCCTCTGCTACCTGCTCGCCGTCGATGGCTTCCGCTTCCTCCTCGACTGCGGCTGGA 180
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      CCGACCTCTGCGACCCCTCCCACCTCCAACCCCTCGCCAAGGTTGCACCAACAATAGATG 240
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      CAGTTCTTTTGTCTCATGCCGATACCATGCATCTAGGAGCTTTGCCATATGCTATGAAAC 300
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      ATCTCGGACTATCTGCACCAGTATATGCCACAGAACCTGTATTTAGACTTGGCATTTTAA 360
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      CCTTGTATGATTACTTTATATCACGACGGCAAGTTTCAGATTTTGACTTGTTTACTTTGG 420
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      ACGATATTGATGCTGCATTCCAAAATGTTGTTAGATTGAAGTACTCACAGAACCACCTTT 480
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      TGAATGATAAAGGTGAAGGAATAGTTATTGCTCCACATGTTGCTGGGCATGATTTGGGTG 540
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      GCACGGTATGGAAGATAACAAAAGATGGGGAGGATGTTGTTTATGCTGTTGACTTCAACC 600
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      ATCGTAAAGAGAGGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTC 660
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      TGATAACTGATGCATACAATGCCTTGAACA--ACCATGTCTACAAAAGGCAGCAGGATCA 718
consensus_10482#1      -----------------AATGCTTTCAGCTCTAGCATTACTACTATACCCA-CACAGCCA 42
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      AGATTTCATTGATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGAT 778
consensus_10482#1      TGGTTGCA--GATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGAT 100
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      TGATACAGCTGGTAGAGTTCTTGGAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACG 838
consensus_10482#1      TGATACAGCTGGTAGAGTTCTTGAAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACG 160
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      GCATTTGATCTACCCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGT 898
consensus_10482#1      GCATTTGATCTACCCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGT 220
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      CAAGAGTTTTCTTGAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGA 958
consensus_10482#1      CAAGAGTTTTCTTGAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGA 280
consensus_10482#2      ------TCCCCTTGGATG--TGAGCGCCAGAATAT-GCTGTTTGTTGCTCTCCCGAGATC 51
                             *   **** ***  ***  *    *** *    ** * ***  * * * ***  

consensus_10482#0      CAATGCC--TTCCTATTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAG 1016
consensus_10482#1      CAATGCC--TTCCTATTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAG 338
consensus_10482#2      CCTTTTTAGTTTTAGTTAGCTTATTCTAGAGAG-TAGTAGACCCAAGAG-GTGTGTTGAT 109
                       *  *     **    ***   * *  ** * ** ** ** **  *   * *  **   * 

consensus_10482#0      CTGGGAGATGCACCAAAGGTGGTTCTAGCAT-CCATGGCAAGCTTGGAGGTTGGCTTTTC 1075
consensus_10482#1      CTGGGAGATGCACCAAAGGTGGTTCTAGCAT-CCATGGCAAGCTTGGAGGTTGGCTTTTC 397
consensus_10482#2      GAGACAATTTCAATATATATGCTTTTTGTATATTATTGTACACTTG-ATAATGGTTCATT 168
                         *  *  * **  * *  ** ** * * **   ** * *  **** *   *** *  * 

consensus_10482#0      TCATGACATATTTGTTGATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAA 1135
consensus_10482#1      TCATGACATATTTGTTGATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAA 457
consensus_10482#2      CCTGAATCCTGATGTTGAAAAAAAAAAAAAAAAAAAAAAA-------------------- 208
                        *   *      ****** *    ***  **  *** **                     

consensus_10482#0      GGGACAG-----------------------------TTTGGGACACTAGCTCGCATGCTC 1166
consensus_10482#1      GGGACAGCTATCTAATTACAAAGTATCCCATTCCAGTTTGGGACACTAGCTCGCATGCTC 517
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      CAAGTAGATCCACCTCCAAAAGCTGTAAAGGTCACTATGAGCAAGCGAATTCCTTTAGTT 1226
consensus_10482#1      CAAGTAGATCCACCTCCAAAAGCTGTAAAGGTCACTATGAGCAAGCGAATTCCTTTAGTT 577
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      GGTGATGAGCTGAAAGCTTACGAAGAAGAACAAGAACGGATAAAAAAGGAGGAAGCGCTA 1286
consensus_10482#1      GGTGATGAGCTGAAAGCTTACGAAGAAGAACAAGAACGGATAAAAAAGGAGGAAGCGCTA 637
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      AAGGCCAGTCTAAACAAAGAGGAGGAAAAGAAGGCGTCTCTTGGATCAAACGCAAAGGCT 1346
consensus_10482#1      AAGGCCAGTCTAAACAAAGAGGAGGAAAAGAAGGCGTCTCTTGGATCAAACGCAAAGGCT 697
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      TCTGATCCCATGGTTATTGATGCCAGCACATCTCGCAAACCATCCAACGCTGGTTCAAAG 1406
consensus_10482#1      TCTGATCCCATGGTTATTGATGCCAGCACATCTCGCAAACCATCCAACGCTGGTTCCAAG 757
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      TTTGGCGGGAATGTGGATATTCTCATTGATGGATATGTCCCTCCATCATCAAGTGTTGCT 1466
consensus_10482#1      TTTGGCGGGAATGTGGATATTCTCATTG-------------------------------- 785
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      CCAATGTTTCCTTTCTTTGAAAATACTTCTGAATGGGATGACTTCGGTGAGGTTATCAAC 1526
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      CCTGAAGACTATCTGATGAAGCAAGAAGAAATGGATAATACTTTGATGCCCGGTGCTGGG 1586
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      GATGGTATGGATAGTATGCTTGATGAGGGCTCAGCACGCCTACTCCTTGATTCTACACCC 1646
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      TCAAAAGTTATTTCCAACGAGATGACTGTGCAAGTCAAGTGTTCATTAGCATATATGGAC 1706
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      TTTGAAGGTCGGTCTGATGGGCGCTCTGTAAAATCTGTTATTGCTCATGTGGCCCCATTA 1766
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      AAACTTGTTTTGGTTCATGGATCAGCAGAAGCTACTGAGCATTTAAAAATGCATTGTTCG 1826
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      AAGAACTCAGACTTGCATGTTTATGCTCCTCAGATAGAAGAAACTATTGATGTGACATCA 1886
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      GATTTATGTGCTTACAAGGTACAACTTTCGGAGAAGTTAATGAGTAATGTTATTTCTAAG 1946
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      AAGTTGGGTGAGCATGAAATTGCATGGGTAGATGCAGAGGTTGGAAAAACAGATGACAAG 2006
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      CTTACTTTGTTGCCCCCGTCGTCAACTCCAGCAGCCCACAAGTCAGTTCTTGTGGGTGAT 2066
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      TTGAAATTGGCTGATTTTAAGCAATTCCTGGCAAATAAAGGTTTGCAGGTTGAATTTGCT 2126
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      GGTGGTGCTTTACGGTGTGGTGAATACATCACACTGCGCAAGATTGGTGATGCTGGCCAA 2186
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      AAGGGCAGCACAGGTTCCCAGCAGATTGTGATCGAAGGGCCCCTGTGTGAGGACTATTAC 2246
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      AAGATTCGTGAGCTTCTTTACTCTCAGTTCTACTTGTTGTAAAATGTAATGGACCGGACC 2306
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      ATGGCATCTCTTTCCTTTCGTGTTGATGTTGTTGTACACGGAGGAACCGTTAATCCATTT 2366
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      GGATCTGAGCGCCAGAATATGCTGTTTGTTGCTCTCCCGAGATCCCTTTTTAGTTTTAGT 2426
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      TAGCTTATTTTAGAGAGTAGTAGACCCAAGAGGTGTGTTGATGAGACAATTTCAATATAT 2486
consensus_10482#1      ------------------------------------------------------------
consensus_10482#2      ------------------------------------------------------------
                                                                                   

consensus_10482#0      ATGCTTTTTGTAAAAAAAAAAAAAAAAAAAAAGG 2520
consensus_10482#1      ----------------------------------
consensus_10482#2      ----------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)