These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10492#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3119 fasta sequence [ACAAAAAAACAAGCCAAGAAAAGGCCACCTCAGTGAGAGAGGGAAGGGAGGGAGGGAGGGAGGAGGGAGAGATCTCCTGCTGCCTCGCGATTTCCGGCGGCAAAAAGGTTCGATTTTGATCCCCGTCTCCGGATTCGCCCAGCCCCGATTTGCCCTTGCGGCGCGGCCTCGCTGGTTTCTGCAAGTGATAGAGAAAGATCCCGATTTTAACAGTGGCAGTTCGTGGCCCGCCCGCTTCTGCTTCTGGTTTTGGGCGATTCGGCGGTTGCTGGACTGGAGGGAGTCGCGGGTGCAGTGTTCTGGTTCGGATCTGAGCGGGTGTTGGGTGTTTTCAACTCTAATTCGGGCGAGCAATGAGGGTTCTTGATGCGTGACCTGATGCGGGAGGCGTATTGGGAGAAGATCTCTTGAAGTTTTTTTTTTTTTTTGGTTTTGGTTTGTTTGGGGGGTTTCCTTGGAGTGGAGTCTCTTGCCCGGATCGCCACACTCGTTCTATGGGCTGTGTCAGTTCGAAGCAATTCCATGGCGAGGAGCAGCGTGGCGGCGAGGGGAAGCCCCGGCGGCGCCCATCTAGCAACTCTCTGAGGCGTCTTGTTAGTTACAATTCCAGCAAGAGGCATGAGCACTTTGAGGAGGAGGATGAAGAAGGTGTGGTTGTGTCAGCCACCTCCTCCAGTGCTGGACATCGTGTAGGGAATGATGTGAGCACGGCTAGGCTCATCCGGAAGCCCCCCGCGCCGGTGGTTGAGGCTGTGGCTGTGCCTGTGGCTGCATTGCCAGATGAGGCGGCTTCTGTGGCGGTTAGCGTGGTTGATGTGGAGAGGCCAGTTGCCGCGCCTGCGAATTGGAGGCGTGCTCCGAATGGCGCGGCGGAGCAAGAGCCTAGGAGTGGTGGTACAAGGAGTGAGGCGAAACCGAGGATTACAGATGTTGTGCCCAATGGAGTGCAGGGGGGGCATGCGGCAGCTGGCTGGCCAAGGTGGCTCACAGAGGTCGCAGCAGAGGCAGTCCGTGGGTGGCAACCTCGGAAGGCAGAGTCTTTCGAGAAGTTGGACAAGATAGGGCAAGGTACATACAGTAGTGTTTACAAAGCACGTGATCTTGAGAGTGGAAAAATTGTGGCACTTAAGAAAGTTCGGTTTGCCAACATGGACCGTGAGAGCGTGCGGTTCATGGCAAGGGAAATTCACATCTTAAGAAGACTTGATCACCCAAATGTTATTAAGCTTGAAGGTTTGGTGACGTCGCGCATGTCTAGTAGCTTGTATCTTGTATTTGAATACATGGAGCATGATCTAGCGGGACTTGCAGCTACACCTGGCATAAAGTTCACAGAGCCTCAGGTCAAGTGTTACATGCAACAACTACTCTCTGGACTTGAACACTGTCATAATCGTGGTGTTTGGCATCGGGATATAAAGGGCGCAAATCTCCTCATTGACAACAATGGTGTTCTCAAAATAGCAGACTTTGGTCTAGCCACATTCTTTAATCCTAACCAAAAGCAACATTTGACAAGTCGTGTGGTAACATTATGGTACCGACCTCCTGAACTATTGCTGGGTGCTACTAACTATGGTGCTGCTGTTGATCTCTGGAGTGCTGGTTGCATTCTTGCGGAATTGCTGTCTGGGAAGCCTATCATGCCAGGGCGAACAGAGGTGGAACAATTGCACAAAATATTTAAGCTTTGTGGTTCACAATCAGAGGATTTCTGGGCTAATTTGAAGTTGTCACGTGCTACAATATTCAAGCCACAACATCCTTATCGTCGATGTGTGAATGATGTATACAAGGATTTCCCTCCTCCGGCTTTAGCGCTATTGGATTGTTTACTTGCTGTAGAACCCTCAGAATAGGGGTACTGCTGCTTCGGCCCTTGGAAGCGAATTCTTCACGACAAAGCCTTATGCTTGTGATCCATCAAGTCTACCTAAATATCCTCCAAGCAAGGAATATGATGCTAAGCTTCGAGACGAGGAGGCTAGAAGGCAAAGAGCAGCTGCAGTTAAAGGACATGAATCTGAAGCTGGGGCGTAGAAAGCAACTTCCAGCCACCAAATGGCAACAACGAATTGCAGCAACGACGGGTTCAGCTTAATCCCAAAAGCAGCAGTAATAAGTTTATTCCCAAGGAGGGATGCTGTCACTGGCTTCCCCATTGATCCTCCAGGAAGAGCTGGAGACAATGTTTACCCTCAGCCTGCGCCTCTGATGCATGCTGGTCGTTCATCCTCTACTCTGGGCCGATCAAGTGGCACTGATCAGAATGCTCAGAGGTTTTACACATCTCAAATTGCTGCTGCTGAGATGTCTACTGCAACTGGTGGGCAGCGAGGCAATGCCACTAAGCTGTCCTCCAACCCTTGGGGAGAGTGCCAGGAGACAATATTTGAGAGAGCATCGATCTAGTTCAAGATATAGTCAACTTGCTGCTGCTGAACCCTCTGACAGACCTGAATGGACACACCAATTCCAAGAAAGACCATCATCTTCCCACCGCAAAGATGATGGGGCAGCAAATAAGGAACCTACTGTGGTGAATGGCGCTAAGAAGAGCAGGATCCACTAC-TCAGGACCATTAATGCCTCCTGGAGTAAACATGGAAGAAATCCTTCGAGAGCACGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAAAAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAAACAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTG-CAGTGGTTTGGTTTTCACCAGCAAAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCA-AGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCACCAATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTTGGCAGATGACAAGAGAAAAAATAATATAATGGAAGTACAGATCATTGGTGCCAAAAAATG] [+] EMBL AU161196 [ACAAAAAAACAAGCCAAGAAAAGGCCACCTCAGTGAGAGAGGGAAGGGAGGGAGGGAGGGAGGAGGGAGAGATCTCCTGCTGCCTCGCGATTTCCGGCGGCAAAAAGGTTCGATTTTGATCCCCGTCTCCGGATTCGCCCAGCCCCGATTTGCCCTTGCGGCGCGGCCTCGCTGGTTTCTGCAAGTGATAGAGAAAGATCCCGATTTTAACAGTGGCAGTTCGTGGCCCGCCCGCTTCTGCTTCTGGTTTTGGGCGATTCGGCGGTTGCTGGACTGGAGGGAGTCGCGGGTGCAGTGTTCTGGTTCGGATCTGAGCGGGTGTTGGGTGTTTTCAACTCTAATTCGGGCGAGCAATGAGGGTTCTTGATGCGTGACCTGATGCGGGAGGCGTATTGGGAGAAGATCTCTTGAAGTTTTTTTTTTTTTTTGGTTTTGGTTTGTTTGGGGG ] [+] EMBL AK072696 [ CCTCAGTGAGAGAGGGAAGGGAGGGAGGGAGGGAGGAGGGAGAGATCTCCTGCTGCCTCGCGATTTCCGGCGGCAAAAAGGTTCGATTTTGATCCCCGTCTCCGGATTCGCCCAGCCCCGATTTGCCCTTGCGGCGCGGCCTCGCTGGTTTCTGCAAGTGATAGAGAAAGATCCCGATTTTAACAGTGGCAGTTCGTGGCCCGCCCGCTTCTGCTTCTGGTTTTGGGCGATTCGGCGGTTGCTGGACTGGAGGGAGTCGCGGGTGCAGTGTTCTGGTTCGGATCTGAGCGGGTGTTGGGTGTTTTCAACTCTAATTCGGGCGAGCAATGAGGGTTCTTGATGCGTGACCTGATGCGGGAGGCGTATTGGGAGAAGATCTCTTGAAG TTTTTTTTTTTTTGGTTTTGGTTTGTTTGGGGGGTTTCCTTGGAGTGGAGTCTCTTGCCCGGATCGCCACACTCGTTCTATGGGCTGTGTCAGTTCGAAGCAATTCCATGGCGAGGAGCAGCGTGGCGGCGAGGGGAAGCCCCGGCGGCGCCCATCTAGCAACTCTCTGAGGCGTCTTGTTAGTTACAATTCCAGCAAGAGGCATGAGCACTTTGAGGAGGAGGATGAAGAAGGTGTGGTTGTGTCAGCCACCTCCTCCAGTGCTGGACATCGTGTAGGGAATGATGTGAGCACGGCTAGGCTCATCCGGAAGCCCCCCGCGCCGGTGGTTGAGGCTGTGGCTGTGCCTGTGGCTGCATTGCCAGATGAGGCGGCTTCTGTGGCGGTTAGCGTGGTTGATGTGGAGAGGCCAGTTGCCGCGCCTGCGAATTGGAGGCGTGCTCCGAATGGCGCGGCGGAGCAAGAGCCTAGGAGTGGTGGTACAAGGAGTGAGGCGAAACCGAGGATTACAGATGTTGTGCCCAATGGAGTGCAGGGGGGGCATGCGGCAGCTGGCTGGCCAAGGTGGCTCACAGAGGTCGCAGCAGAGGCAGTCCGTGGGTGGCAACCTCGGAAGGCAGAGTCTTTCGAGAAGTTGGACAAGATAGGGCAAGGTACATACAGTAGTGTTTACAAAGCACGTGATCTTGAGAGTGGAAAAATTGTGGCACTTAAGAAAGTTCGGTTTGCCAACATGGACCGTGAGAGCGTGCGGTTCATGGCAAGGGAAATTCACATCTTAAGAAGACTTGATCACCCAAATGTTATTAAGCTTGAAGGTTTGGTGACGTCGCGCATGTCTAGTAGCTTGTATCTTGTATTTGAATACATGGAGCATGATCTAGCGGGACTTGCAGCTACACCTGGCATAAAGTTCACAGAGCCTCAGGTCAAGTGTTACATGCAACAACTACTCTCTGGACTTGAACACTGTCATAATCGTGGTGTTTGGCATCGGGATATAAAGGGCGCAAATCTCCTCATTGACAACAATGGTGTTCTCAAAATAGCAGACTTTGGTCTAGCCACATTCTTTAATCCTAACCAAAAGCAACATTTGACAAGTCGTGTGGTAACATTATGGTACCGACCTCCTGAACTATTGCTGGGTGCTACTAACTATGGTGCTGCTGTTGATCTCTGGAGTGCTGGTTGCATTCTTGCGGAATTGCTGTCTGGGAAGCCTATCATGCCAGGGCGAACAGAGGTGGAACAATTGCACAAAATATTTAAGCTTTGTGGTTCACAATCAGAGGATTTCTGGGCTAATTTGAAGTTGTCACGTGCTACAATATTCAAGCCACAACATCCTTATCGTCGATGTGTGAATGATGTATACAAGGATTTCCCTCCTCCGGCTTTAGCGCTATTGGATTGTTTACTTGCTGTAGAACCCTCAGAATAGGGGTACTGCTGCTTCGGCCCTTGGAAGCGAATTCTTCACGACAAAGCCTTATGCTTGTGATCCATCAAGTCTACCTAAATATCCTCCAAGCAAGGAATATGATGCTAAGCTTCGAGACGAGGAGGCTAGAAGGCAAAGAGCAGCTGCAGTTAAAGGACATGAATCTGAAGCTGGGGCGTAGAAAGCAACTTCCAGCCACCAAATGGCAACAACGAATTGCAGCAACGACGGGTTCAGCTTAATCCCAAAAGCAGCAGTAATAAGTTTATTCCCAAGGAGGGATGCTGTCACTGGCTTCCCCATTGATCCTCCAGGAAGAGCTGGAGACAATGTTTACCCTCAGCCTGCGCCTCTGATGCATGCTGGTCGTTCATCCTCTACTCTGGGCCGATCAAGTGGCACTGATCAGAATGCTCAGAGGTTTTACACATCTCAAATTGCTGCTGCTGAGATGTCTACTGCAACTGGTGGGCAGCGAGGCAATGCCACTAAGCTGTCCTCCAACCCTTGGGGAGAGTGCCAGGAGACAATATTTGAGAGAGCATCGATCTAGTTCAAGATATAGTCAACTTGCTGCTGCTGAACCCTCTGACAGACCTGAATGGACACACCAATTCCAAGAAAGACCATCATCTTCCCACCGCAAAGATGATGGGGCAGCAAATAAGGAACCTACTGTGGTGAATGGCGCTAAGAAGAGCAGGATCCACTAC TCAGGACCATTAATGCCTCCTGGAGTAAACATGGAAGAAATCCTTCGAGAGCACGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAAAAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAAACAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTG CAGTGGTTTGGTTTTCACCAGCAAAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCA AGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCACCAATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTTGGCAGATGACAAGAGAAAAAATAATATAATGGA ] [+] EMBL CF324714 [ TCTGGACTTGAACACTGTCATAATCGTGGTGTTTTGCATCGGGATATAAAGGGCGCAAATCTCCTCATTGACAACAATGGTGTTCTCAAAATAGCAGACTTTGGTCTAGCCACATTCTTTAATCCTAACCAAAAGCAACATTTGACAAGTCGTGTGGTAACATTATGGTACCGACCTCCTGAACTATTGCTGGGTGCTACTAACTATGGTGCTGCTGTTGATCTCTGGAGTGCTGGTTGCATTCTTGCGGAATTGCTGTCTGGGAAGCCTATCATGCCAGGGCGAACAGAGGTGGAACAATTGCACAAAATATTTAAGCTTTGTGGTTCACCATCAGAGGATTTCTGGGCTAATTTGAAGTTGTCACGTGCTACAATATTCAAGCCACAACATCCTTATCGTCGATGTGTGAA ] [+] EMBL AK104081 [ GCTGTAGAA CCTCAGAATAGGGGTACTGCTGCTTCGGCCCTTGGAAGCGAATTCTTCACGACAAAGCCTTATGCTTGTGATCCATCAAGTCTACCTAAATATCCTCCAAGCAAGGAATATGATGCTAAGCTTCGAGACGAGGAGGCTAGAAGGCAAAGAGCAGCTGCAGTTAAAGGACATGAATCTGAAGCT GGGCGTAGAAAGCAACTTCCAG CACCAAATGGCAACAACGAATTGCAGCAACGACGGGTTCAGCTTAATCCAAAAAGCAGCAGTAATAAGTTTATTCCAAAGGA GGATGCTGTCACTGGCTTCCCAATTGATCCTCCAGGAAGAGCTGGAGACAATGTTTACCCTCAGCGTGCGCCTCTGATGCATGCTGGTCGTTCATCCTCTACTCTGGGCCGATCAAGTGGCACTGATCAGAATGCTCAGAGGTTTTACACATCTCAAATTGCTGCTGCTGAGATGTCTACTGCAACTGGTGGGCAGCGAGGCAATGCCACTAAGCTGTCCTCCAA CCTTGGGGAGAGTGCCAGGAGACAATATTTGAGAGAGCATCGATCTAGTTCAAGATATAGTCAACTTGCTGCTGCTGAACCCTCTGACAGACCTGAATGGACACACCAATTCCAAGAAAGACCATCATCTTCCCACCGCAAAGATGATGGGGCAGCAAATAAGGAACCTACTGTGGTGAATGGCGCTAAGAAGAGCAGGATCCACTAC TCAGGACCATTAATGCCTCCTGGAGTAAACATGGAAGAAATCCTTCGAGAGCACGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAAAAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAAACAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTG CAGTGGTTTGGTTTTCACCAGCAAAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCA AGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCACCAATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTTGGCAGATGACAAGAGAAAAAATAATATAATGGAAGTACAGATCATTGGTGCCctctggtg] [-] EMBL CA762106 [ CAGACCTGAATGGACGCATCAATTCCAAGAAAGACCATCATCTTTCCACCGCAAAGATGATGGGGCAGCAAATAAGGAACCTACTGTGGTGAATGGCGCTAAGAAGAGCAGGATCCACTAC TCAGGACCATTAATGCCTCTTGGAGTAAGCATGGAAGAAATCCTTCGAGAGCGCGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTTGCCATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAACAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAATCAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTATGCTAGATGTTCCACCCATGG CAGTGGTTTGGTTTTCTCCAGCAAAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCA AGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCGCCAATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTTGGCAGATGTCAAGAGAAAAAA AATATAATGGAAGTACAGATCTTTGGTGCCAAAAAA ] [+] EMBL BI807617 [ aGAACCTACTGTGGTGAATGGC CTAAGAAGACCAGGATCC CTAC TCAGGACC TTAATCCCTCCTGGAGTAAACATGGAAGAAATCCTTCGAGAGCACGAGC GCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCA TCGGAATCGCTTCTGTACACTACCCAGAATGCCAGACCGTAGGCGAAACAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGTCCCCATTTCAGCCATGAAAAAC ATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTGCCAGTGGTTTGGTTTTCACCAGC AAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCACAGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCACC ATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTT GCAGATGACAAGAGAAAAAA AATATAATGGAAGTACAGATCATTGGTGCCAAAAAAa ] [+] EMBL C97437 [ CTAAGAAGACCAGGATCCACTACTTCAGGACCATTAATGCCTCCTGGATTAAACATGGAAGAAATCCTTCGAGAGCACGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAAAAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAAACAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTG CAGTGGTTTGGTTTTCACCAGCAAAAAAAAAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||