These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10511#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 854 fasta sequence [TTTCACTCATTCCAAGGCAACGAGCTGGAGCTCTCCTCCTCCAATGTATCTATCTATCTCTAGCCCAAGATATATCTGGCTTGCCATTCTCATAGCTTGCCAGTTTCTGATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG-ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTTCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACGAAAGGGCAGCTGATGCTTCTAAAGAACCAGGTGATTGCGCTGAAGTCCAAGGAGGAGGAGGCAG] [+] EMBL CB661806 [TTTCACTCATTCCAAGGCAACGAGCTGGAGCTCTCCTCCTCCAATGTATCTATCTATCTCTAGCCCAAGATATATCTGGCTTGCCATTCTCATAGCTTGCCAGTTTCTGATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCTGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAGGATAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTCGACGTCAAAGAACGCTCTCGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTAGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTGCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACAAAAGGGCAGC ] [+] EMBL OSS14938A [ TTTCTGATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTNCGAGCTGGAGAGGTTNCGTGGACTTGTGCGTGAGTNGGAGGAGAGGGNAGTGAAGTTTta ] [+] EMBL CB635423 [ TTCTCATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTTCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACGAAAGGGCAGCTGATGCTTCTAAAGAACCAGGTGATTGCGCTGAAGTCCAAGGAGGAGGAGGCAG] [+] EMBL CB630762 [ TGATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCTGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAGGATAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTCGACGTCAAAGAACGCTCTCGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTAGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTGCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACAAAAGGGCAGCTGTTGCTTCTAAAGAACCAGGTGATTGCGCTGAAGTCCAAGGAGGAGGA ] [+] EMBL CB634425 [ GATGCGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTTCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACGAAAGGGCAGCTGATGCTTCTAAAGAACC ] [+] EMBL CB678457 [ GAGCCACGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAATAAGCTTCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGACGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCACACGAAAGGGCAG ] [+] EMBL CB637496 [ TCTGTGCGTCGTCAGCTCTCCAGCCCGGGCACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAAGAACAGGAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||